DHFR

General Information

Gene Name       : DHFR
Gene ID             : ENSG00000228716.6
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: DHFR)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878DHFRENSG00000228716.6107.2997.43102.36ENCSR000AEF
HepG2DHFRENSG00000228716.635.1858.9447.06ENCSR985KAT
K562DHFRENSG00000228716.694.75118.70106.72ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for DHFR is not avaliable on ENCORE database.



Proteins bound to RNA
  • DHFR RNA is bound by 27 proteins.  







eCLIP assay for DHFR is not avaliable on ENCORE database.





27 proteins are bound to DHFR RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr57992343479923470-3'-UTR,intron-Distal5.215446.99975K562UPF1
chr57992347079923553-3'-UTR,intron-Distal3.5792918.56841K562UPF1
chr57992334979923405-3'-UTR,intron-Distal4.362247.50817K562UPF1
chr57992450679924592-3'-UTR,intron-Distal3.419559.30098K562YBX3
chr57992329079923352-3'-UTR,intron-Distal3.1322311.53044K562AKAP1
chr57992451779924583-3'-UTR,intron-Distal4.103115.81489K562UPF1
chr57992329279923338-3'-UTR,intron-Distal4.208117.71860K562UPF1
chr57995059179950676-5'-UTR,intron-Distal,intron-Proximal4.874874.11950K562DDX3X
chr57995022279950248-5'-UTR,CDS,intron-Distal3.085006.05661K562DDX3X
chr57995018479950236-5'-UTR,CDS,intron-Distal3.588363.71591HepG2PRPF8
chr57994681179946848-5'-UTR,intron-Distal5.8868756.33003K562FASTKD2
chr57994678679946861-5'-UTR,intron-Distal5.5337816.52152HepG2FASTKD2
chr57993572779935787-intron-Distal3.537523.35103HepG2QKI
chr57994703479947093-intron-Distal4.2971610.67363HepG2SDAD1
chr57994704779947072-intron-Distal4.9425516.45132K562ZNF800
chr57994703879947074-intron-Distal4.634244.50478HepG2FTO
chr57994705379947096-intron-Distal3.604344.53578K562AKAP8L
chr57994706779947095-intron-Distal3.018334.34383HepG2GRWD1
chr57994704279947100-intron-Distal3.756003.49390K562DROSHA
chr57994761679947667-intron-Distal6.4288223.32188HepG2QKI
chr57994701479947091-intron-Distal3.138795.24615HepG2DDX52
chr57994704679947092-intron-Distal4.7417312.16294K562DHX30
chr57994660179946656-5'-UTR,intron-Distal3.0601617.16940K562QKI
chr57994724379947298-intron-Distal3.944194.42591K562DDX52
chr57994704879947099-intron-Distal3.6915713.63487HepG2AQR
chr57993562079935727-intron-Distal4.583948.59328HepG2QKI
chr57994704479947098-intron-Distal4.001014.00997K562HLTF
chr57994707479947093-intron-Distal5.449144.60331HepG2FTO
chr57994758279947701-intron-Distal6.7712048.45744K562QKI
chr57994702179947094-intron-Distal4.0311914.15646HepG2ZNF800
chr57994704079947095-intron-Distal4.6306116.68137HepG2DHX30
chr57995000379950107-intron-Distal,intron-Proximal4.556583.70058HepG2XPO5
chr57994704079947089-intron-Distal3.762053.24593HepG2XPO5
chr57994704479947101-intron-Distal4.3581610.31235HepG2RBM15
chr57994806079948106-intron-Distal5.812618.94626HepG2QKI
chr57994704579947094-intron-Distal3.299274.51212K562MTPAP
chr57994707279947095-intron-Distal4.4492013.37210K562ZNF800
chr57994665679946677-5'-UTR,intron-Distal3.8821331.79469K562QKI
chr57994783179947880-intron-Distal3.882133.37809K562HNRNPL
chr57994684879946868-5'-UTR,intron-Distal5.8719742.86992K562FASTKD2
chr57994660179946645-5'-UTR,intron-Distal4.0524417.83192HepG2FASTKD2
chr57994658479946644-5'-UTR,intron-Distal3.4989524.84573HepG2BCLAF1
chr57994761379947662-intron-Distal4.721035.17983K562RPS11
chr57994725979947357-intron-Distal3.203839.12603HepG2DHX30
chr57994797179948060-intron-Distal5.5216025.18356HepG2QKI
chr57994668679946701-5'-UTR,intron-Distal4.303657.06840HepG2QKI
chr57994705079947094-intron-Distal6.7257512.25437K562SDAD1
chr57994724579947294-intron-Distal4.1478010.20652K562LARP7
chr57994704879947096-intron-Distal3.020557.74727HepG2NOLC1
chr57994704379947095-intron-Distal3.924886.46119K562XRCC6
chr57994671479946767-5'-UTR,intron-Distal4.9142527.62759HepG2FASTKD2
chr57994761979947660-intron-Distal4.777357.36599HepG2FUS
chr57994803879948096-intron-Distal6.0260410.62660K562QKI
chr57993466979934785-intron-Distal3.561963.27276HepG2HNRNPL
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for DHFR is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for DHFR is not available on ENCORE database.

  • 157 RBPs can affect the levels of DHFR.  








The Knockdown/knockout RNA-Seq assay for DHFR is not available on ENCORE database.





157 RBPs can affect the gene expression of DHFR :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DHFRENSG00000228716.21169.789401504.76680-0.363303.169202.03030HepG2AATF
DHFRENSG00000228716.21067.442001687.35910-0.6606016.5664015.34360HepG2ACO1
DHFRENSG00000228716.2931.050101804.00360-0.954305.853605.11320HepG2AKAP1
DHFRENSG00000228716.2431.59660735.06370-0.768206.540804.98370HepG2AKAP8
DHFRENSG00000228716.21076.750401695.43040-0.6550014.5791013.01050HepG2AKAP8L
DHFRENSG00000228716.2686.566001492.74270-1.120507.318306.07050HepG2ASCC1
DHFRENSG00000228716.21004.234302301.60240-1.1965025.7613024.05440HepG2AUH
DHFRENSG00000228716.21163.225001625.21880-0.482503.120302.12490HepG2BCCIP
DHFRENSG00000228716.2376.119002083.43800-2.4697091.6241089.33100HepG2BOP1
DHFRENSG00000228716.21133.787802479.84020-1.1291032.6745030.63340HepG2CALR
DHFRENSG00000228716.22137.463802832.47070-0.406202.630201.68290HepG2CCAR1
DHFRENSG00000228716.2805.278901418.18210-0.816505.147604.11140HepG2CIRBP
DHFRENSG00000228716.2983.785701687.16510-0.7782022.7698021.27420HepG2CKAP4
DHFRENSG00000228716.2986.683501912.72370-0.9550016.1690014.67060HepG2CPSF6
DHFRENSG00000228716.21301.386001971.65570-0.599408.315106.50070HepG2CPSF7
DHFRENSG00000228716.21270.738202451.69050-0.9481030.8213029.15590HepG2CELF1
DHFRENSG00000228716.21548.278702636.26920-0.7678030.2364028.28540HepG2DAZAP1
DHFRENSG00000228716.21314.076501560.64480-0.248103.049102.17690HepG2DDX19B
DHFRENSG00000228716.2887.851101660.91570-0.9036015.9843014.51360HepG2DDX21
DHFRENSG00000228716.21110.851701624.75220-0.548607.420005.93680HepG2DDX24
DHFRENSG00000228716.22002.458301495.226200.421303.105101.74530HepG2DDX27
DHFRENSG00000228716.21617.178801210.688900.417603.516501.94230HepG2DDX28
DHFRENSG00000228716.2426.596801728.27320-2.0184016.5788015.18300HepG2DDX3X
DHFRENSG00000228716.2686.906901597.86820-1.2180017.4299015.73120HepG2DDX55
DHFRENSG00000228716.21336.427802172.03360-0.700704.333903.12410HepG2DDX59
DHFRENSG00000228716.2312.618401484.21210-2.2472020.0717018.61260HepG2DDX6
DHFRENSG00000228716.2873.284801640.39830-0.9095022.7634020.96050HepG2DNAJC21
DHFRENSG00000228716.21028.945701625.89830-0.6601017.8109016.29240HepG2DNAJC2
DHFRENSG00000228716.2770.832701528.96920-0.9881011.541109.44470HepG2AGO1
DHFRENSG00000228716.2628.566301427.21640-1.183108.406407.41140HepG2EIF2S1
DHFRENSG00000228716.2661.193101476.58800-1.159106.226004.91010HepG2EIF3D
DHFRENSG00000228716.21170.938401577.43880-0.429901.953801.41290HepG2EIF4A3
DHFRENSG00000228716.21109.564901535.48210-0.468702.086801.48540HepG2EIF4B
DHFRENSG00000228716.21793.039702600.75520-0.5365012.2457010.73520HepG2EIF4G1
DHFRENSG00000228716.21722.320702491.37250-0.532606.384105.17010HepG2EIF4G2
DHFRENSG00000228716.21846.420202642.38600-0.517105.706104.89490HepG2ETF1
DHFRENSG00000228716.21159.843101649.00470-0.507706.231404.97820HepG2EWSR1
DHFRENSG00000228716.2843.665401319.37240-0.645103.640002.27950HepG2FAM120A
DHFRENSG00000228716.21294.314101582.48820-0.290002.377801.31470HepG2FASTKD2
DHFRENSG00000228716.21104.109902417.35350-1.1305017.5536015.90460HepG2FIP1L1
DHFRENSG00000228716.2981.186501915.97280-0.965505.016503.65570HepG2FTO
DHFRENSG00000228716.21020.874401476.17490-0.532102.437401.81080HepG2G3BP1
DHFRENSG00000228716.21309.899202168.25990-0.727108.405107.33330HepG2GPKOW
DHFRENSG00000228716.21304.987501611.04970-0.304003.830102.69490HepG2HDGF
DHFRENSG00000228716.21026.354001656.11360-0.690309.957008.84210HepG2HNRNPA1
DHFRENSG00000228716.21601.844402422.75870-0.5969014.2154012.43110HepG2HNRNPA2B1
DHFRENSG00000228716.21352.322301843.41550-0.446907.202506.11670HepG2HNRNPF
DHFRENSG00000228716.2964.531301494.02870-0.631303.889103.07380HepG2HNRNPK
DHFRENSG00000228716.21772.786402401.46980-0.4379010.645909.40260HepG2HNRNPL
DHFRENSG00000228716.21443.442802069.20690-0.519605.269904.43110HepG2HNRNPLL
DHFRENSG00000228716.21321.983701667.97290-0.335402.972201.98680HepG2HNRNPM
DHFRENSG00000228716.21503.356101815.25170-0.272002.244401.58850HepG2IGF2BP1
DHFRENSG00000228716.2472.453601500.61100-1.6673013.0478011.70480HepG2IGF2BP2
DHFRENSG00000228716.21593.981501869.22060-0.229803.467102.65330HepG2ILF2
DHFRENSG00000228716.21270.310301542.56520-0.280203.844802.64560HepG2KIF1C
DHFRENSG00000228716.21764.901402989.85750-0.760507.930906.51550HepG2LARP4
DHFRENSG00000228716.21301.639801678.18510-0.366603.097701.89590HepG2LARP7
DHFRENSG00000228716.22006.513601591.526300.334202.288401.69000HepG2MAGOH
DHFRENSG00000228716.2970.631201545.50080-0.671102.278901.32260HepG2METAP2
DHFRENSG00000228716.21187.391901956.61100-0.7206011.8130010.25800HepG2MSI2
DHFRENSG00000228716.2478.343201638.31120-1.7761014.7337013.34970HepG2NCBP2
DHFRENSG00000228716.22151.513302614.11380-0.281003.157002.34440HepG2NOL12
DHFRENSG00000228716.2726.861201466.95900-1.013107.324205.53590HepG2NONO
DHFRENSG00000228716.2129.06680346.50640-1.424809.655307.95830HepG2PABPC1
DHFRENSG00000228716.2840.065401459.38510-0.796804.796003.85710HepG2PABPC4
DHFRENSG00000228716.21405.199601811.33020-0.366305.333904.20920HepG2PARN
DHFRENSG00000228716.21143.946501376.19220-0.266702.694002.09360HepG2PCBP1
DHFRENSG00000228716.21169.856102177.93080-0.896608.476806.76240HepG2PCBP2
DHFRENSG00000228716.21216.122701632.15820-0.424505.864304.82260HepG2PPIL4
DHFRENSG00000228716.2575.138701232.94990-1.1001015.2722013.59440HepG2PRPF8
DHFRENSG00000228716.21048.477501400.26160-0.417405.757605.02680HepG2PTBP1
DHFRENSG00000228716.21344.158602495.37250-0.8926018.6607017.29520HepG2PUF60
DHFRENSG00000228716.21505.194002648.91550-0.8155035.0033033.37380HepG2PUM1
DHFRENSG00000228716.21318.413602647.00090-1.0056028.1305026.15220HepG2PUM2
DHFRENSG00000228716.21304.235501718.71000-0.398106.832405.93890HepG2PUS1
DHFRENSG00000228716.21005.860801516.65740-0.592509.435108.38080HepG2QKI
DHFRENSG00000228716.21283.927102101.81760-0.711104.532403.64200HepG2RAVER1
DHFRENSG00000228716.21430.927702553.73290-0.8357014.0646012.36530HepG2RBM15
DHFRENSG00000228716.2699.957402208.57940-1.6578035.6825034.23210HepG2RBM22
DHFRENSG00000228716.21395.891902023.59500-0.535705.436104.03190HepG2RBM27
DHFRENSG00000228716.21921.744501558.411100.302203.543402.94740HepG2NELFE
DHFRENSG00000228716.21923.122001451.349500.406006.309605.43190HepG2RECQL
DHFRENSG00000228716.2787.013501985.60550-1.3351032.1594030.40420HepG2RPLP0
DHFRENSG00000228716.21038.473102064.50900-0.991309.754008.08900HepG2RPS10
DHFRENSG00000228716.2506.320901436.62770-1.5046010.783109.66560HepG2RPS19
DHFRENSG00000228716.2955.405001866.33300-0.9660015.9674014.16820HepG2RPS2
DHFRENSG00000228716.21406.493101905.07550-0.437703.756202.49350HepG2RPS5
DHFRENSG00000228716.2487.248501219.67450-1.3238019.2419017.51910HepG2RRP9
DHFRENSG00000228716.21271.293001629.64250-0.358305.582004.72040HepG2SAFB2
DHFRENSG00000228716.21066.299402431.51630-1.1892015.7847014.09890HepG2SF3A3
DHFRENSG00000228716.21103.143202048.12830-0.8927015.4452013.92150HepG2SF3B1
DHFRENSG00000228716.21189.988502050.57670-0.785103.464801.67780HepG2SLTM
DHFRENSG00000228716.21366.133001900.44340-0.4762011.091509.93980HepG2SMN1
DHFRENSG00000228716.21248.489702142.71530-0.779307.364005.75300HepG2SMNDC1
DHFRENSG00000228716.21382.909002045.08470-0.564504.349302.31590HepG2SND1
DHFRENSG00000228716.2705.468102494.56870-1.8221044.8551043.47510HepG2SRFBP1
DHFRENSG00000228716.22603.253801521.757600.7745024.4413023.34090HepG2SRSF1
DHFRENSG00000228716.21495.672202203.72980-0.559204.460603.15930HepG2SRSF3
DHFRENSG00000228716.21780.816802463.77780-0.468309.586008.51370HepG2SRSF5
DHFRENSG00000228716.21222.980101811.04760-0.5664011.180409.94470HepG2SRSF7
DHFRENSG00000228716.2600.142201237.98960-1.0446023.2963021.98540HepG2SRSF9
DHFRENSG00000228716.22463.545802165.980200.185601.843101.40310HepG2SSB
DHFRENSG00000228716.21227.682801964.18150-0.678005.043703.41640HepG2SUB1
DHFRENSG00000228716.21692.197402802.02760-0.7276027.1181025.50200HepG2SUCLG1
DHFRENSG00000228716.21134.926701632.45290-0.524405.984404.63110HepG2SUPT6H
DHFRENSG00000228716.2589.538201590.74710-1.4320024.1037022.46390HepG2SUPV3L1
DHFRENSG00000228716.21897.100601367.682100.472006.543005.74430HepG2TAF15
DHFRENSG00000228716.21111.620302016.73370-0.8594014.0343012.60580HepG2TARDBP
DHFRENSG00000228716.21397.39390783.256100.835103.111601.98200HepG2TBRG4
DHFRENSG00000228716.2433.393401066.27920-1.2988017.7321015.69720HepG2TFIP11
DHFRENSG00000228716.2950.051501256.85460-0.403704.178003.15910HepG2TIA1
DHFRENSG00000228716.21070.255201778.14390-0.7324013.8297012.85940HepG2TIAL1
DHFRENSG00000228716.21157.567101794.01940-0.6321015.0664013.90010HepG2TRIM56
DHFRENSG00000228716.22031.566202437.82000-0.263002.365301.56330HepG2TUFM
DHFRENSG00000228716.21083.245202067.98170-0.9329015.8562014.30450HepG2U2AF1
DHFRENSG00000228716.2567.692702376.79610-2.0658011.094309.00690HepG2U2AF2
DHFRENSG00000228716.21688.357502580.35900-0.612006.487105.17380HepG2UBE2L3
DHFRENSG00000228716.2651.91960939.76740-0.527602.457001.74160HepG2UCHL5
DHFRENSG00000228716.21095.588902156.38240-0.9769036.3386034.40800HepG2UPF1
DHFRENSG00000228716.21501.792202216.46580-0.5616011.923009.94920HepG2UTP18
DHFRENSG00000228716.21454.111702081.90370-0.5178011.0857010.01560HepG2UTP3
DHFRENSG00000228716.22302.620001680.140900.4546010.608409.43440HepG2ZC3H8
DHFRENSG00000228716.2445.490002371.60900-2.41240201.63940199.09250HepG2ZNF622
DHFRENSG00000228716.28009.077109861.64090-0.300202.828501.58760K562ABCF1
DHFRENSG00000228716.25019.616706573.64950-0.389106.479405.66330K562AGGF1
DHFRENSG00000228716.25687.234207222.97610-0.344903.851702.65110K562AKAP8
DHFRENSG00000228716.25006.123206840.06440-0.450306.137505.13910K562AKAP8L
DHFRENSG00000228716.23503.400307765.92650-1.1484031.2923029.51200K562AQR
DHFRENSG00000228716.25353.966407176.65510-0.422708.517606.78880K562ATP5C1
DHFRENSG00000228716.23594.971704638.96720-0.367808.072906.40050K562BCLAF1
DHFRENSG00000228716.24153.582006234.32740-0.585904.520403.39460K562BOP1
DHFRENSG00000228716.25762.201708141.91790-0.498704.707802.73880K562CKAP4
DHFRENSG00000228716.25378.004608970.78680-0.738205.490303.93210K562CNOT7
DHFRENSG00000228716.26177.134508487.09420-0.4583011.546409.29710K562CPEB4
DHFRENSG00000228716.22830.705106628.83380-1.2276045.4799042.42730K562CPSF6
DHFRENSG00000228716.22809.011503519.34720-0.325204.616303.19930K562CSTF2
DHFRENSG00000228716.23256.622104067.92240-0.320905.336003.49220K562DDX27
DHFRENSG00000228716.21897.291903244.92960-0.7742016.2029013.58790K562DDX3X
DHFRENSG00000228716.24707.760108782.86770-0.8997044.3759042.08050K562DDX47
DHFRENSG00000228716.22913.360004112.38370-0.497304.911302.69410K562DDX51
DHFRENSG00000228716.22595.620703289.93280-0.342004.899402.98510K562DDX6
DHFRENSG00000228716.25970.996007361.12590-0.302005.166203.91540K562DKC1
DHFRENSG00000228716.22330.494603807.82800-0.7083010.724508.81720K562EFTUD2
DHFRENSG00000228716.24361.296906144.22070-0.494508.031406.90250K562EIF2S2
DHFRENSG00000228716.22771.082804077.22570-0.557105.165203.69420K562EIF3D
DHFRENSG00000228716.22756.660703959.12300-0.5223011.144909.53290K562EIF3G
DHFRENSG00000228716.22314.167003390.15590-0.550907.648606.28530K562EIF4A3
DHFRENSG00000228716.24200.118305071.84480-0.272102.776501.50930K562EXOSC5
DHFRENSG00000228716.23355.387806744.76810-1.0073023.5232020.94770K562FMR1
DHFRENSG00000228716.23609.826005716.83710-0.663309.114307.36150K562FTO
DHFRENSG00000228716.23667.932306328.86910-0.7870016.9938014.95720K562GPKOW
DHFRENSG00000228716.25663.474208188.39990-0.531905.042904.02290K562GRSF1
DHFRENSG00000228716.23735.428105429.47670-0.539507.554006.61430K562HNRNPC
DHFRENSG00000228716.23179.695504663.90450-0.552606.684704.70310K562HNRNPK
DHFRENSG00000228716.24736.014605964.20020-0.332705.222403.98110K562HNRNPU
DHFRENSG00000228716.26805.992609610.88090-0.497906.889605.64340K562HSPD1
DHFRENSG00000228716.23143.833104669.38930-0.570705.627503.94600K562IGF2BP2
DHFRENSG00000228716.23449.841504749.50510-0.461205.782103.95000K562IGF2BP3
DHFRENSG00000228716.26301.655907259.42400-0.204102.241001.50850K562KIF1C
DHFRENSG00000228716.22357.490905404.15910-1.1968019.0895016.52540K562KRR1
DHFRENSG00000228716.23854.409005256.18930-0.447505.623403.54460K562LARP7
DHFRENSG00000228716.25468.566106948.72570-0.345604.354102.91410K562MAK16
DHFRENSG00000228716.26910.922404897.684400.496708.029206.35670K562MATR3
DHFRENSG00000228716.26368.489908132.33190-0.352704.668103.42290K562MBNL1
DHFRENSG00000228716.24025.494206177.69760-0.6179011.376909.51730K562METAP2
DHFRENSG00000228716.22505.439303385.26710-0.434206.373704.53560K562NCBP2
DHFRENSG00000228716.22471.572903751.47280-0.602007.144904.88940K562NONO
DHFRENSG00000228716.25975.608506747.76070-0.175302.372201.67710K562NSUN2
DHFRENSG00000228716.26211.291408618.32330-0.472502.839601.58910K562PABPC1
DHFRENSG00000228716.212459.174506451.360400.9494017.7819015.74340K562PCBP3
DHFRENSG00000228716.29754.919804948.355000.9791025.7224023.49670K562POLR2G
DHFRENSG00000228716.26431.578708046.82290-0.323203.025302.16240K562PPIG
DHFRENSG00000228716.22502.767603705.45010-0.566107.159405.95510K562PRPF8
DHFRENSG00000228716.23463.048904867.94900-0.491306.640505.13850K562PSIP1
DHFRENSG00000228716.23444.373804768.02290-0.469107.210706.17660K562PTBP1
DHFRENSG00000228716.28558.4818010743.43990-0.328002.399801.64160K562PUF60
DHFRENSG00000228716.29334.5216011426.61960-0.291803.885202.60040K562PUM1
DHFRENSG00000228716.23462.334506784.29640-0.9705022.5893021.05960K562PUS1
DHFRENSG00000228716.23330.902504142.58460-0.314603.913901.76880K562QKI
DHFRENSG00000228716.25546.305206609.58740-0.253001.903101.39530K562RBM15
DHFRENSG00000228716.22998.715704572.10490-0.608509.235207.55820K562RBM22
DHFRENSG00000228716.24452.209007262.79960-0.706003.392701.64960K562RBM39
DHFRENSG00000228716.22021.496203774.55970-0.9009012.9654011.17400K562RPS19
DHFRENSG00000228716.25942.359804558.609800.382304.011502.24030K562SDAD1
DHFRENSG00000228716.22651.251305398.83780-1.026005.740603.80190K562SF1
DHFRENSG00000228716.24705.054406657.76610-0.5008011.105509.55230K562SF3A3
DHFRENSG00000228716.23868.181706019.11000-0.637907.818606.13460K562SF3B1
DHFRENSG00000228716.22563.215703849.64130-0.586809.986608.31550K562SF3B4
DHFRENSG00000228716.23439.273004414.38040-0.360103.569302.34900K562SRSF5
DHFRENSG00000228716.26941.109805632.355300.301303.737801.95950K562SRSF9
DHFRENSG00000228716.22206.409003587.92990-0.701508.667406.82430K562SUPV3L1
DHFRENSG00000228716.23531.756704730.68100-0.421704.359103.46400K562TARDBP
DHFRENSG00000228716.23453.098204563.25970-0.402205.537804.31550K562TIA1
DHFRENSG00000228716.24168.399204973.48880-0.254802.160201.34020K562TRIM56
DHFRENSG00000228716.22705.921703589.00250-0.407503.226802.02720K562U2AF1
DHFRENSG00000228716.22640.697903705.96340-0.488907.990406.61380K562U2AF2
DHFRENSG00000228716.25903.304707154.76440-0.277403.419502.62610K562UPF1
DHFRENSG00000228716.25806.042707553.90370-0.379703.223001.92050K562UTP3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for DHFR is not available on ENCORE database.





3 RBPs can affect the splicing of DHFR :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEDHFRENSG00000228716.2chr5-799498267994987679945207799453137995022279950493-0.085000.000000.00000excludedK562SF3B4
SEDHFRENSG00000228716.2chr5-799337017993379579929695799298117994520779945334-0.055000.000030.00052excludedK562AQR
SEDHFRENSG00000228716.2chr5-799498267994986479945207799453137995022279950377-0.086000.001130.04122excludedK562HNRNPU
MXEDHFRENSG00000228716.2chr5-79929695799298117994520779945313799243567992498479950222799503660.077000.000000.000011includedK562SF3B4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for DHFR is not avaliable on ENCORE database.