SYNJ2

General Information

Gene Name       : SYNJ2
Gene ID             : ENSG00000078269.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SYNJ2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SYNJ2ENSG00000078269.140.600.450.53ENCSR000AEF
HepG2SYNJ2ENSG00000078269.1424.6828.9426.81ENCSR985KAT
K562SYNJ2ENSG00000078269.1418.8415.4017.12ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SYNJ2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SYNJ2 RNA is bound by 60 proteins.  







eCLIP assay for SYNJ2 is not avaliable on ENCORE database.





60 proteins are bound to SYNJ2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr6158519934158519984+3'-UTR3.232896.45172HepG2ZC3H11A
chr6158484822158484838+3'-UTR,CDS,intron-Proximal3.379685.39266HepG2GRWD1
chr6158487777158487826+3'-UTR,intron-Distal3.423734.30158HepG2U2AF2
chr6158484824158484832+3'-UTR,CDS3.533786.74947HepG2BCLAF1
chr6158483187158483290+3'-UTR,CDS,intron-Proximal3.5147113.81082HepG2PRPF8
chr6158519741158519912+3'-UTR3.224476.73831HepG2PABPN1
chr6158487845158487902+3'-UTR,intron-Distal4.540379.80234HepG2U2AF2
chr6158484876158484924+3'-UTR,CDS,intron-Proximal3.948496.08301HepG2EFTUD2
chr6158518301158518347+3'-UTR3.984283.57526HepG2IGF2BP1
chr6158519016158519083+3'-UTR4.171143.31330K562UPF1
chr6158487733158487777+3'-UTR,intron-Distal,intron-Proximal3.342415.16337HepG2U2AF2
chr6158484810158484878+3'-UTR,CDS,intron-Proximal3.140036.24581HepG2U2AF2
chr6158450038158450118+3'-UTR,CDS,intron-Proximal3.2790017.99503HepG2BUD13
chr6158484838158484903+3'-UTR,CDS3.770009.89684HepG2GRWD1
chr6158484842158484887+3'-UTR,CDS3.642428.46997HepG2PPIG
chr6158451370158451454+3'-UTR,intron-Distal,intron-Proximal5.7522312.80988HepG2SF3B4
chr6158519811158519930+3'-UTR3.336556.27237HepG2IGF2BP1
chr6158450021158450140+3'-UTR,CDS,intron-Proximal3.0926832.43038HepG2PRPF8
chr6158451421158451480+3'-UTR,intron-Distal,intron-Proximal4.182698.26514HepG2U2AF2
chr6158487902158487939+3'-UTR,intron-Distal3.892648.23042HepG2U2AF2
chr6158484884158484940+3'-UTR,CDS,intron-Proximal4.5826814.89254HepG2PRPF8
chr6158502140158502310+5'-UTR,CDS,intron-Proximal4.098877.27704K562ZNF622
chr6158402948158402997+5'-UTR,CDS3.602739.16352HepG2NCBP2
chr6158499102158499160+5'-UTR,intron-Proximal4.083525.56912HepG2AQR
chr6158502143158502164+5'-UTR,CDS3.300625.79905HepG2BCLAF1
chr6158438454158438501+5'-UTR,intron-Distal3.112963.84371HepG2HNRNPC
chr6158499282158499369+5'-UTR,CDS,intron-Proximal3.8187015.36989HepG2PRPF8
chr6158502157158502244+5'-UTR,CDS3.1744810.63727HepG2PPIG
chr6158499171158499199+5'-UTR,CDS,intron-Proximal3.693514.90219HepG2AQR
chr6158502215158502331+5'-UTR,CDS3.648959.81417HepG2GRWD1
chr6158499213158499246+5'-UTR,CDS3.120753.24137HepG2EIF3D
chr6158402910158403004+5'-UTR,CDS4.2479736.44408HepG2DDX3X
chr6158516708158516744+CDS4.015703.61890HepG2G3BP1
chr6158492768158492863+CDS,intron-Proximal3.005209.45448HepG2BUD13
chr6158502469158502486+CDS3.568805.15500HepG2BCLAF1
chr6158516843158516968+CDS3.110295.17908HepG2IGF2BP1
chr6158485764158485896+CDS,intron-Proximal3.4185718.97989HepG2EFTUD2
chr6158505036158505059+CDS3.792208.40792HepG2PPIG
chr6158403004158403122+CDS,intron-Proximal3.1837210.35436HepG2DDX3X
chr6158438268158438325+CDS,intron-Proximal3.1178611.92860HepG2PPIG
chr6158449867158449934+CDS3.199747.34722HepG2GRWD1
chr6158438321158438375+CDS,intron-Proximal3.931319.38298HepG2PRPF8
chr6158485764158485769+CDS4.082724.21087HepG2GRWD1
chr6158492824158492875+CDS,intron-Proximal3.185999.91818HepG2PRPF8
chr6158497811158497851+CDS,intron-Proximal4.346967.47181HepG2PRPF8
chr6158497796158497844+CDS,intron-Proximal3.624729.06911HepG2GRWD1
chr6158487609158487678+CDS,intron-Proximal3.513448.08507HepG2GRWD1
chr6158492576158492640+CDS,intron-Proximal4.8931714.29637HepG2SF3B4
chr6158464363158464460+CDS,intron-Proximal3.7493319.30350HepG2PRPF8
chr6158480226158480295+CDS,intron-Proximal4.4816622.66925HepG2SF3B4
chr6158487449158487484+CDS,intron-Proximal4.537533.25089HepG2AQR
chr6158514105158514137+CDS,intron-Proximal4.396929.58174HepG2PPIG
chr6158485731158485781+CDS4.0381212.68282HepG2PPIG
chr6158487617158487663+CDS3.773734.51950HepG2FASTKD2
chr6158485763158485831+CDS,intron-Proximal3.001508.08800HepG2PRPF8
chr6158476002158476058+CDS3.130085.56511HepG2GRWD1
chr6158487627158487674+CDS,intron-Proximal4.119323.71151HepG2SRSF7
chr6158403017158403099+CDS3.463364.48593HepG2FTO
chr6158504487158504534+CDS3.027318.33225HepG2BCLAF1
chr6158517201158517245+CDS5.012276.29060HepG2EIF3H
chr6158454416158454516+CDS,intron-Proximal3.2119315.82085HepG2SF3A3
chr6158480384158480429+CDS,intron-Proximal5.166608.29703HepG2AQR
chr6158482976158483066+CDS,intron-Distal,intron-Proximal4.1957617.59220HepG2SF3B4
chr6158464324158464408+CDS,intron-Proximal6.1275616.65656HepG2U2AF2
chr6158505029158505097+CDS,intron-Proximal3.047453.01994K562BUD13
chr6158505202158505244+CDS,intron-Proximal3.112425.50267HepG2PRPF8
chr6158454469158454526+CDS,intron-Proximal3.218445.16337HepG2U2AF2
chr6158480341158480365+CDS3.097845.00751HepG2BCLAF1
chr6158480319158480390+CDS,intron-Proximal3.3033811.50948HepG2PPIG
chr6158487537158487609+CDS3.719738.78341HepG2GRWD1
chr6158490576158490591+CDS3.144474.24993HepG2PPIG
chr6158464373158464431+CDS4.1513112.12223HepG2PPIG
chr6158487414158487477+CDS,intron-Proximal3.803798.82653HepG2SF3A3
chr6158454468158454525+CDS,intron-Proximal3.1395910.41657HepG2BUD13
chr6158497799158497856+CDS,intron-Proximal3.337873.47285K562PRPF8
chr6158485803158485906+CDS,intron-Proximal3.4509119.28259HepG2BUD13
chr6158504604158504631+CDS,intron-Proximal4.069037.05872HepG2PPIG
chr6158486022158486068+CDS,intron-Proximal4.035845.26367K562AQR
chr6158482972158483056+CDS,intron-Distal,intron-Proximal4.815126.11702K562SF3B4
chr6158504594158504628+CDS4.169119.98400HepG2BCLAF1
chr6158516691158516732+CDS3.885004.59929HepG2RBM15
chr6158490564158490574+CDS,intron-Proximal3.843605.73400HepG2PPIG
chr6158480192158480291+CDS,intron-Proximal3.878228.20120HepG2SF3A3
chr6158480360158480432+CDS,intron-Proximal4.2723427.33343HepG2PRPF8
chr6158487639158487699+CDS,intron-Proximal3.839109.30629HepG2PRPF8
chr6158454450158454518+CDS,intron-Proximal3.649909.74647HepG2SF3B4
chr6158489756158489797+CDS,intron-Proximal3.239004.74618HepG2AQR
chr6158403018158403117+CDS3.057227.83177HepG2NCBP2
chr6158508006158508060+CDS,intron-Distal,intron-Proximal3.280035.76569HepG2PRPF8
chr6158449787158449827+CDS,intron-Proximal3.214038.60746HepG2PPIG
chr6158514007158514038+CDS3.412983.63043HepG2GRWD1
chr6158449856158449932+CDS4.4859210.24021HepG2PPIG
chr6158516991158517054+CDS3.095473.61668HepG2IGF2BP1
chr6158489758158489812+CDS,intron-Proximal3.772988.08764HepG2EFTUD2
chr6158517194158517296+CDS4.687166.67181HepG2IGF2BP1
chr6158516635158516675+CDS,intron-Proximal3.235737.86366HepG2BUD13
chr6158495634158495672+CDS3.037597.20615HepG2BCLAF1
chr6158487475158487488+CDS,intron-Proximal3.038724.24993HepG2PPIG
chr6158487547158487629+CDS4.226573.36385K562UCHL5
chr6158475995158476066+CDS,intron-Proximal3.374557.09676HepG2SRSF7
chr6158502506158502580+CDS,intron-Proximal3.328468.45537HepG2PRPF8
chr6158507875158507910+CDS,intron-Distal,intron-Proximal4.540373.45799HepG2U2AF2
chr6158497755158497796+CDS4.241608.00190HepG2GRWD1
chr6158509599158509696+CDS,intron-Proximal4.7031412.27453HepG2SF3B4
chr6158516650158516663+CDS3.327744.77136HepG2PPIG
chr6158489624158489684+CDS,intron-Proximal4.3005819.62465HepG2SF3A3
chr6158487613158487687+CDS,intron-Proximal3.3148811.02720HepG2EFTUD2
chr6158480300158480383+CDS3.998825.89933HepG2SRSF7
chr6158487452158487512+CDS,intron-Proximal4.332858.98256HepG2U2AF2
chr6158492648158492728+CDS3.177998.66679HepG2BUD13
chr6158492809158492846+CDS,intron-Proximal5.150787.65840HepG2PPIG
chr6158464228158464262+intron-Distal,intron-Proximal3.446987.08758HepG2SF3B4
chr6158438131158438191+intron-Distal,intron-Proximal4.063293.88679HepG2CSTF2
chr6158447523158447590+intron-Distal3.324573.37567HepG2HNRNPK
chr6158423424158423457+intron-Distal3.399123.91859HepG2SUGP2
chr6158480611158480639+intron-Distal,intron-Proximal3.574445.49379HepG2TIAL1
chr6158410892158411025+intron-Distal5.7043810.80235HepG2NKRF
chr6158474694158474757+intron-Distal3.694659.02517HepG2HNRNPL
chr6158448348158448408+intron-Distal3.277116.38100HepG2CSTF2T
chr6158475225158475380+intron-Distal5.9339361.16964HepG2XPO5
chr6158470056158470114+intron-Distal3.457635.13416HepG2DROSHA
chr6158425971158426056+intron-Distal3.200374.45075HepG2HNRNPK
chr6158477495158477580+intron-Distal3.428196.04421HepG2U2AF2
chr6158471320158471361+intron-Distal4.619353.70058HepG2XPO5
chr6158451142158451185+intron-Distal3.803576.16549HepG2U2AF2
chr6158470941158471001+intron-Distal6.5616615.81032HepG2RBFOX2
chr6158470954158471098+intron-Distal3.598475.80394HepG2DROSHA
chr6158464501158464607+intron-Distal,intron-Proximal3.856865.25185K562PRPF8
chr6158449225158449283+intron-Distal3.571434.68402HepG2CSTF2T
chr6158474926158475055+intron-Distal4.4167926.85586HepG2HNRNPL
chr6158485387158485506+intron-Distal5.319437.82868HepG2PRPF4
chr6158475288158475382+intron-Distal5.7002512.49787HepG2GTF2F1
chr6158471001158471061+intron-Distal6.6633514.98494HepG2RBFOX2
chr6158438132158438179+intron-Distal,intron-Proximal4.071033.21729HepG2TIA1
chr6158417573158417635+intron-Distal5.115768.60555HepG2RBFOX2
chr6158439115158439170+intron-Distal3.057283.57433HepG2CSTF2T
chr6158474757158474808+intron-Distal3.920519.70093HepG2HNRNPL
chr6158475038158475088+intron-Distal4.7097313.93590HepG2AGGF1
chr6158464671158464708+intron-Distal3.809023.16028HepG2SUGP2
chr6158442559158442650+intron-Distal4.262414.61288HepG2PRPF4
chr6158403268158403337+intron-Distal3.388093.40381HepG2DROSHA
chr6158475385158475452+intron-Distal5.1953514.72166HepG2XPO5
chr6158480599158480611+intron-Distal,intron-Proximal3.985915.47438HepG2TIAL1
chr6158481904158482005+intron-Distal3.6607222.27879HepG2XPO5
chr6158455377158455491+intron-Distal4.573406.27161HepG2BCCIP
chr6158448992158449097+intron-Distal3.491455.92454HepG2XRN2
chr6158438133158438184+intron-Distal,intron-Proximal3.062854.24473HepG2CSTF2T
chr6158441668158441698+intron-Distal3.385094.09242HepG2QKI
chr6158475313158475360+intron-Distal5.8006331.60817HepG2HNRNPL
chr6158441133158441183+intron-Distal3.087285.47831HepG2QKI
chr6158474935158475038+intron-Distal5.3340524.39389HepG2AGGF1
chr6158474599158474666+intron-Distal4.7869716.78264HepG2AGGF1
chr6158431975158432034+intron-Distal3.813153.01994HepG2GTF2F1
chr6158434838158434938+intron-Distal5.719388.23608HepG2HNRNPM
chr6158410863158411077+intron-Distal3.828583.93293K562FUS
chr6158417474158417530+intron-Distal4.389455.08471HepG2HNRNPK
chr6158433091158433141+intron-Distal3.719385.62053HepG2HNRNPM
chr6158452440158452571+intron-Distal3.383078.76352HepG2FUS
chr6158411078158411130+intron-Distal3.819794.37279HepG2CSTF2T
chr6158474848158474940+intron-Distal4.421568.85473HepG2GTF2F1
chr6158421860158421917+intron-Distal3.536023.10961HepG2MATR3
chr6158455357158455476+intron-Distal4.566417.06575HepG2EXOSC5
chr6158480600158480655+intron-Distal,intron-Proximal3.105764.37737HepG2TIA1
chr6158474552158474667+intron-Distal5.513347.54986HepG2GTF2F1
chr6158475297158475384+intron-Distal5.7252622.70211HepG2AGGF1
chr6158505950158506028+intron-Distal4.035783.73283HepG2HNRNPL
chr6158474841158474919+intron-Distal8.0493159.30757K562AGGF1
chr6158454095158454144+intron-Distal3.327223.47028HepG2U2AF1
chr6158474554158474599+intron-Distal4.3423510.68429HepG2AGGF1
chr6158447399158447530+intron-Distal3.001893.14895K562NONO
chr6158441106158441209+intron-Distal4.478385.44904K562TARDBP
chr6158432544158432587+intron-Distal5.408639.14097HepG2HNRNPM
chr6158452609158452661+intron-Distal4.9707210.84450HepG2XPO5
chr6158470791158470881+intron-Distal3.400163.00103HepG2DROSHA
chr6158474583158474713+intron-Distal6.8983947.84831K562AGGF1
chr6158475253158475297+intron-Distal4.4952313.80220HepG2AGGF1
chr6158411589158411669+intron-Distal3.225547.02989HepG2FASTKD2
chr6158474828158474975+intron-Distal4.8639438.16155HepG2XPO5
chr6158475181158475247+intron-Distal6.4491031.56377K562AGGF1
chr6158470816158470831+intron-Distal3.780698.55117HepG2RBFOX2
chr6158432634158432732+intron-Distal3.980189.93312HepG2HNRNPM
chr6158474685158474801+intron-Distal4.5966619.39110HepG2AGGF1
chr6158426883158426947+intron-Distal3.646917.45714HepG2HNRNPK
chr6158426728158426842+intron-Distal4.2120313.58398HepG2HNRNPK
chr6158474534158474573+intron-Distal3.673557.19064HepG2HNRNPL
chr6158424329158424366+intron-Distal3.118183.35050HepG2SUGP2
chr6158408032158408088+intron-Distal3.286693.25288HepG2HNRNPC
chr6158480955158481022+intron-Distal3.845258.80515HepG2HNRNPK
chr6158418388158418469+intron-Distal4.031763.69311HepG2CSTF2
chr6158460522158460570+intron-Distal3.319616.89846HepG2XPO5
chr6158482404158482489+intron-Distal3.166253.60809HepG2HNRNPK
chr6158410712158410752+intron-Distal4.366354.36133HepG2CSTF2T
chr6158475290158475345+intron-Distal7.5372938.12622K562AGGF1
chr6158474602158474675+intron-Distal5.9315918.37111HepG2XPO5
chr6158418955158419027+intron-Distal3.905903.30829HepG2CSTF2
chr6158492967158493048+intron-Distal3.580594.23459K562PRPF8
chr6158439124158439173+intron-Distal3.863233.25631HepG2PRPF4
chr6158476093158476170+intron-Distal,intron-Proximal3.702927.20533HepG2EFTUD2
chr6158447517158447586+intron-Distal4.4080310.29749HepG2CSTF2T
chr6158475088158475187+intron-Distal5.2227332.39041HepG2AGGF1
chr6158439058158439229+intron-Distal3.653345.53636HepG2GTF2F1
chr6158474971158475018+intron-Distal3.537784.03335HepG2CDC40
chr6158441373158441464+intron-Distal3.453664.79863K562TARDBP
chr6158470752158470816+intron-Distal4.8271614.41023HepG2RBFOX2
chr6158411041158411203+intron-Distal4.638464.96496K562NONO
chr6158474827158474935+intron-Distal5.8810244.89949HepG2AGGF1
chr6158467531158467610+intron-Distal3.134934.86332HepG2SUGP2
chr6158481863158481959+intron-Distal3.416829.55528HepG2NKRF
chr6158449043158449082+intron-Distal4.020663.01994HepG2GTF2F1
chr6158454153158454266+intron-Distal3.361776.73817HepG2U2AF2
chr6158426729158426866+intron-Distal3.767805.60662HepG2PCBP2
chr6158451962158452079+intron-Distal4.8088413.31162HepG2CSTF2
chr6158474573158474676+intron-Distal5.1769626.77211HepG2HNRNPL
chr6158448886158448929+intron-Distal3.286833.79911HepG2CSTF2T
chr6158507796158507848+intron-Distal,intron-Proximal4.252997.11707HepG2RBM5
chr6158459625158459671+intron-Distal3.188104.49023HepG2XPO5
chr6158418659158418730+intron-Distal4.5899312.32881HepG2CSTF2
chr6158417276158417320+intron-Distal3.036323.14359HepG2HNRNPK
chr6158430181158430253+intron-Distal4.617056.39924HepG2HNRNPK
chr6158480604158480639+intron-Distal,intron-Proximal3.282283.37074K562TIA1
chr6158470831158470875+intron-Distal4.0763811.23027HepG2RBFOX2
chr6158474946158475087+intron-Distal3.224223.33650HepG2YBX3
chr6158441293158441368+intron-Distal5.014926.10540K562EIF4G2
chr6158439170158439260+intron-Distal4.259016.03429HepG2CSTF2T
chr6158441485158441540+intron-Distal4.116193.88340K562TARDBP
chr6158411023158411111+intron-Distal3.574276.01218HepG2HNRNPM
chr6158438922158438993+intron-Distal,intron-Proximal4.432283.97018HepG2HNRNPM
chr6158475250158475397+intron-Distal4.587874.04407K562HNRNPL
chr6158403267158403369+intron-Distal3.066547.39965HepG2CSTF2T
chr6158403258158403322+intron-Distal3.256924.89227HepG2KHSRP
chr6158507694158507761+intron-Distal3.816033.06084HepG2HNRNPK
chr6158486361158486398+intron-Distal4.960265.28062HepG2XPO5
chr6158410969158411034+intron-Distal3.377845.30287HepG2SFPQ
chr6158421429158421493+intron-Distal3.176095.10681HepG2SUGP2
chr6158449019158449104+intron-Distal3.235517.51354HepG2CSTF2T
chr6158515347158515398+intron-Distal3.575445.29549HepG2HNRNPL
chr6158474975158475047+intron-Distal5.2305416.84582HepG2XPO5
chr6158467634158467708+intron-Distal3.169086.46712HepG2RBFOX2
chr6158422118158422237+intron-Distal3.534014.77128HepG2RBFOX2
chr6158430162158430254+intron-Distal3.842903.11802K562HNRNPK
chr6158460581158460656+intron-Distal4.332489.81715HepG2XPO5
chr6158465763158465824+intron-Distal3.568296.84506HepG2HNRNPK
chr6158473919158473994+intron-Distal4.619357.14115HepG2XPO5
chr6158480185158480226+intron-Distal,intron-Proximal5.9074715.11967HepG2SF3B4
chr6158441292158441373+intron-Distal3.420205.85763HepG2IGF2BP1
chr6158450160158450201+intron-Distal5.124418.79061HepG2EFTUD2
chr6158475055158475186+intron-Distal7.1469922.30934HepG2XPO5
chr6158461358158461474+intron-Distal4.640254.85626K562TARDBP
chr6158449003158449094+intron-Distal3.9667910.04312HepG2PRPF4
chr6158435208158435261+intron-Distal3.811785.89423HepG2HNRNPM
chr6158456489158456598+intron-Distal3.492733.93303HepG2HNRNPM
chr6158476542158476601+intron-Distal4.146904.13641K562TARDBP
chr6158475207158475313+intron-Distal4.4111321.92852HepG2HNRNPL
chr6158470875158470935+intron-Distal4.481099.96134HepG2RBFOX2
chr6158481884158481951+intron-Distal3.382874.77314HepG2EFTUD2
chr6158449030158449106+intron-Distal3.156766.83112HepG2FAM120A
chr6158410957158410981+intron-Distal3.065955.92031HepG2CSTF2T
chr6158466651158466766+intron-Distal3.576403.19404HepG2PTBP1
chr6158474713158474806+intron-Distal5.7342227.13768K562AGGF1
chr6158468245158468293+intron-Distal4.960385.30668HepG2RBFOX2
chr6158465217158465265+intron-Distal4.265934.12480HepG2HNRNPM
chr6158446993158447093+intron-Distal3.305375.88747HepG2HNRNPL
chr6158468210158468245+intron-Distal3.945306.39220HepG2RBFOX2
chr6158418421158418473+intron-Distal3.355334.21158HepG2CSTF2T
chr6158475140158475374+intron-Distal5.7756814.47166HepG2YBX3
chr6158464211158464250+intron-Distal,intron-Proximal4.141153.00258HepG2RBM5
chr6158502362158502424+intron-Proximal4.320917.95190HepG2AQR
chr6158464262158464318+intron-Proximal4.4677215.66089HepG2SF3B4
chr6158485570158485625+intron-Proximal4.756646.66303HepG2SF3B4
chr6158487423158487452+intron-Proximal7.0905736.34280HepG2SF3B4
chr6158450063158450126+intron-Proximal3.666439.97237HepG2PPIG
chr6158449701158449769+intron-Proximal5.2559419.22985HepG2SF3B4
chr6158502397158502456+intron-Proximal5.244279.26131HepG2SF3B4
chr6158486039158486123+intron-Proximal4.7625010.18833HepG2EFTUD2
chr6158486037158486066+intron-Proximal5.672728.88638HepG2AQR
chr6158502396158502436+intron-Proximal5.165925.24235HepG2EFTUD2
chr6158489620158489669+intron-Proximal4.2676414.98816HepG2SF3B4
chr6158487412158487423+intron-Proximal7.0682636.34280HepG2SF3B4
chr6158483196158483239+intron-Proximal4.496844.90219HepG2AQR
chr6158483224158483276+intron-Proximal3.288043.14090HepG2RBM22
chr6158485589158485624+intron-Proximal5.899136.52092HepG2SF3A3
chr6158476091158476149+intron-Proximal3.317494.84061HepG2RBM22
chr6158454428158454450+intron-Proximal6.5222220.20891HepG2SF3B4
chr6158454398158454428+intron-Proximal5.4414811.94322HepG2SF3B4
chr6158464250158464309+intron-Proximal5.390556.91793HepG2RBM5
chr6158483207158483290+intron-Proximal3.8493111.07163HepG2EFTUD2
chr6158450078158450137+intron-Proximal3.080914.85104HepG2NKRF
chr6158510798158510852+intron-Proximal4.357984.24670HepG2SF3B4
chr6158495528158495603+intron-Proximal3.687545.85035HepG2SF3B4
chr6158450063158450143+intron-Proximal5.3268833.42819HepG2EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SYNJ2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SYNJ2 is not available on ENCORE database.

  • 122 RBPs can affect the levels of SYNJ2.  








The Knockdown/knockout RNA-Seq assay for SYNJ2 is not available on ENCORE database.





122 RBPs can affect the gene expression of SYNJ2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SYNJ2ENSG00000078269.91668.486202272.12430-0.445504.889203.50390HepG2AATF
SYNJ2ENSG00000078269.92003.406503594.56790-0.8434013.1057011.31580HepG2ABCF1
SYNJ2ENSG00000078269.91557.976003053.36920-0.9707044.7344043.02680HepG2ACO1
SYNJ2ENSG00000078269.92393.546101827.077000.389503.444402.34250HepG2ADAR
SYNJ2ENSG00000078269.91145.800704626.85960-2.0137054.8954053.00470HepG2AKAP1
SYNJ2ENSG00000078269.93585.603805407.09140-0.592606.487804.93720HepG2AKAP8
SYNJ2ENSG00000078269.91025.131201609.84270-0.651106.213504.78360HepG2BCCIP
SYNJ2ENSG00000078269.91945.120301440.809900.432902.464401.89590HepG2BOP1
SYNJ2ENSG00000078269.92078.703703373.79800-0.698706.818905.27220HepG2CCAR1
SYNJ2ENSG00000078269.91540.659803637.16750-1.2393027.9723025.87650HepG2CIRBP
SYNJ2ENSG00000078269.92435.736203052.63840-0.325706.870905.90750HepG2CKAP4
SYNJ2ENSG00000078269.91738.709804885.91140-1.4906020.8213018.78290HepG2CNOT7
SYNJ2ENSG00000078269.91769.820201322.671600.420002.381001.73650HepG2CPSF6
SYNJ2ENSG00000078269.92407.596402817.49620-0.226802.553101.93060HepG2CELF1
SYNJ2ENSG00000078269.92623.689703029.46630-0.207503.131402.35020HepG2DAZAP1
SYNJ2ENSG00000078269.92053.420202823.89820-0.4597011.5466010.07740HepG2DDX19B
SYNJ2ENSG00000078269.91119.588302506.06310-1.1625028.2913026.45650HepG2DDX21
SYNJ2ENSG00000078269.91128.536301480.93240-0.392102.646601.38440HepG2DDX27
SYNJ2ENSG00000078269.92759.030304432.12310-0.683808.930007.86000HepG2DDX3X
SYNJ2ENSG00000078269.91732.413902316.78950-0.419304.984403.22520HepG2DDX52
SYNJ2ENSG00000078269.9954.277001582.84150-0.730007.684406.47360HepG2DDX55
SYNJ2ENSG00000078269.92722.939101502.014000.858206.092704.66780HepG2DDX59
SYNJ2ENSG00000078269.92312.513602968.76230-0.360403.210102.12770HepG2DDX5
SYNJ2ENSG00000078269.92382.065801774.468700.424704.163802.97440HepG2DHX30
SYNJ2ENSG00000078269.91483.222802921.22960-0.9778038.3186036.56570HepG2DKC1
SYNJ2ENSG00000078269.91427.108102764.25060-0.9538016.6730014.70830HepG2EEF2
SYNJ2ENSG00000078269.91433.504102304.44990-0.684908.987606.98600HepG2EFTUD2
SYNJ2ENSG00000078269.92964.837803660.03160-0.303902.230601.69230HepG2EIF2S1
SYNJ2ENSG00000078269.91668.679202243.97580-0.427403.608702.58380HepG2EIF3D
SYNJ2ENSG00000078269.91920.919102367.00280-0.301302.938701.82990HepG2EIF3G
SYNJ2ENSG00000078269.91471.938204044.69910-1.4583030.4516028.37440HepG2EIF4A3
SYNJ2ENSG00000078269.94150.105002988.783600.4735011.7547010.26680HepG2EIF4G1
SYNJ2ENSG00000078269.92149.845502983.62760-0.472806.454205.18030HepG2EWSR1
SYNJ2ENSG00000078269.92234.265603629.52910-0.700008.652307.38030HepG2FIP1L1
SYNJ2ENSG00000078269.91512.000802991.70610-0.9845011.041009.02570HepG2FUS
SYNJ2ENSG00000078269.92459.254404081.13160-0.7307010.377109.12270HepG2FXR1
SYNJ2ENSG00000078269.93003.342703785.74290-0.334002.388501.76730HepG2G3BP1
SYNJ2ENSG00000078269.91045.942901997.97670-0.9337015.3749013.43280HepG2GEMIN5
SYNJ2ENSG00000078269.91835.391502296.42180-0.323302.498901.53740HepG2GNB2L1
SYNJ2ENSG00000078269.91007.757601857.41320-0.8821015.6974014.36330HepG2HNRNPA1
SYNJ2ENSG00000078269.91515.542902066.02130-0.447004.748103.85720HepG2HNRNPC
SYNJ2ENSG00000078269.93236.945201676.267000.9493036.5271034.43390HepG2HNRNPF
SYNJ2ENSG00000078269.93287.472602759.601600.252404.733703.86890HepG2HNRNPL
SYNJ2ENSG00000078269.91408.844202503.88160-0.8297017.5687015.52240HepG2HNRNPM
SYNJ2ENSG00000078269.91651.331802052.36260-0.313704.699503.92650HepG2HNRNPU
SYNJ2ENSG00000078269.93069.912101650.633700.8951021.8709020.06670HepG2IGF2BP1
SYNJ2ENSG00000078269.92181.592703848.08760-0.8188012.9173011.58000HepG2IGF2BP2
SYNJ2ENSG00000078269.91809.959102096.42170-0.212002.947602.19310HepG2ILF2
SYNJ2ENSG00000078269.93297.775502791.120500.240502.277301.35050HepG2KIF1C
SYNJ2ENSG00000078269.94074.299705882.96370-0.530004.105802.57170HepG2KRR1
SYNJ2ENSG00000078269.92770.759603563.06890-0.362802.279301.53180HepG2LARP4
SYNJ2ENSG00000078269.91565.797202249.86740-0.522906.513104.80400HepG2LARP7
SYNJ2ENSG00000078269.91736.541802362.26720-0.444004.721003.12120HepG2LIN28B
SYNJ2ENSG00000078269.92139.259704082.55730-0.9324015.4732013.98060HepG2MAGOH
SYNJ2ENSG00000078269.91398.381101905.08970-0.446104.047002.13420HepG2MARK2
SYNJ2ENSG00000078269.92396.484904105.37440-0.776609.999008.85760HepG2MATR3
SYNJ2ENSG00000078269.91456.808002348.53760-0.689005.233903.81870HepG2METAP2
SYNJ2ENSG00000078269.91556.789302936.96730-0.9158021.7784019.80440HepG2MSI2
SYNJ2ENSG00000078269.92050.874301459.541400.490602.819401.84300HepG2MTPAP
SYNJ2ENSG00000078269.93026.987102466.310600.295402.480201.33260HepG2NAA15
SYNJ2ENSG00000078269.92776.094404202.05260-0.598006.769905.79860HepG2NCBP2
SYNJ2ENSG00000078269.9970.875501453.61990-0.582303.235002.04680HepG2NONO
SYNJ2ENSG00000078269.92260.189701268.722100.8330011.390109.96530HepG2NSUN2
SYNJ2ENSG00000078269.92939.791004465.93160-0.603203.609002.58560HepG2PABPC1
SYNJ2ENSG00000078269.93100.174603659.28380-0.239203.305002.65380HepG2PCBP1
SYNJ2ENSG00000078269.93239.294102682.356400.272103.950103.04110HepG2PRPF4
SYNJ2ENSG00000078269.92141.099202977.25360-0.475602.838501.60660HepG2PRPF6
SYNJ2ENSG00000078269.92121.572303723.60400-0.8116027.2767025.90460HepG2PTBP1
SYNJ2ENSG00000078269.91719.407002867.60390-0.7379013.5090012.32580HepG2PUF60
SYNJ2ENSG00000078269.91893.130003110.04480-0.7162025.9356024.40540HepG2PUS1
SYNJ2ENSG00000078269.92559.287901877.985800.446503.542201.57460HepG2RBM14
SYNJ2ENSG00000078269.91851.753003894.48200-1.0725043.2146041.63940HepG2RBM22
SYNJ2ENSG00000078269.94726.345403659.819700.368904.699003.84030HepG2RBM25
SYNJ2ENSG00000078269.91318.877302203.06360-0.740209.650507.70410HepG2RCC2
SYNJ2ENSG00000078269.92016.791704143.89250-1.0389048.0432046.43190HepG2NELFE
SYNJ2ENSG00000078269.93703.594002684.648400.464102.738701.79940HepG2RPS10
SYNJ2ENSG00000078269.9917.746802183.47610-1.2505034.2644032.51080HepG2RPS19
SYNJ2ENSG00000078269.91487.992002502.07470-0.7498011.239109.71990HepG2RPS2
SYNJ2ENSG00000078269.91571.599001207.673000.379902.391901.65530HepG2RRP9
SYNJ2ENSG00000078269.92374.693401827.724000.377607.193806.22530HepG2SAFB2
SYNJ2ENSG00000078269.91505.438602191.47610-0.541705.963904.60010HepG2SERBP1
SYNJ2ENSG00000078269.92188.766801415.991200.628205.078904.14580HepG2SF3B1
SYNJ2ENSG00000078269.94370.572103876.490700.173002.242601.70360HepG2SF3B4
SYNJ2ENSG00000078269.94212.930802749.607300.6155024.0065022.34580HepG2SLBP
SYNJ2ENSG00000078269.91472.788502131.44240-0.5333014.8182013.51510HepG2SMN1
SYNJ2ENSG00000078269.93572.178201575.578401.180807.505206.21040HepG2SNRNP70
SYNJ2ENSG00000078269.92710.415604398.66780-0.6986028.7924027.61820HepG2SRFBP1
SYNJ2ENSG00000078269.91492.441404046.32390-1.4389094.0109092.16960HepG2SRSF1
SYNJ2ENSG00000078269.93136.350801646.914100.9292035.2015033.28330HepG2SRSF7
SYNJ2ENSG00000078269.95239.138703291.992000.6703027.0107025.61960HepG2SRSF9
SYNJ2ENSG00000078269.91306.184403819.07400-1.54790104.28120102.35160HepG2SSB
SYNJ2ENSG00000078269.93447.835802554.120500.432802.507501.36360HepG2SUB1
SYNJ2ENSG00000078269.92402.805103220.01850-0.4223010.527809.44650HepG2SUCLG1
SYNJ2ENSG00000078269.94173.814505938.92610-0.508804.021802.40940HepG2SUGP2
SYNJ2ENSG00000078269.91248.534701575.64560-0.335702.185701.57470HepG2SUPV3L1
SYNJ2ENSG00000078269.92302.772201394.993000.723004.402103.51550HepG2TARDBP
SYNJ2ENSG00000078269.91240.441101994.28140-0.6850012.8554011.91360HepG2TIAL1
SYNJ2ENSG00000078269.92522.582902012.079200.326105.407604.67020HepG2TRIM56
SYNJ2ENSG00000078269.93537.737302801.545200.336503.864102.81130HepG2TUFM
SYNJ2ENSG00000078269.93748.438202965.403100.338002.518201.72160HepG2UBE2L3
SYNJ2ENSG00000078269.91367.26680930.749000.554705.102304.06300HepG2UCHL5
SYNJ2ENSG00000078269.92158.431903843.14040-0.8323035.7905033.87490HepG2UPF1
SYNJ2ENSG00000078269.91020.011601442.68050-0.500202.936501.90250HepG2UPF2
SYNJ2ENSG00000078269.92198.544003710.39560-0.7550028.5662026.95190HepG2UTP3
SYNJ2ENSG00000078269.91588.291503005.63020-0.920209.777807.91980HepG2XRCC6
SYNJ2ENSG00000078269.91098.991601551.05170-0.497104.561003.63880HepG2XRN2
SYNJ2ENSG00000078269.91859.349002647.15700-0.5096013.9414012.62700HepG2ZC3H8
SYNJ2ENSG00000078269.92977.362904226.71370-0.5055018.6435017.53670HepG2ZNF622
SYNJ2ENSG00000078269.93693.779702730.512400.435802.876001.55130HepG2ZRANB2
SYNJ2ENSG00000078269.91260.461101532.08430-0.281502.089001.51900K562AKAP8L
SYNJ2ENSG00000078269.91240.824301607.49680-0.373504.547403.34410K562ATP5C1
SYNJ2ENSG00000078269.91066.60620747.618100.512604.326303.22760K562BOP1
SYNJ2ENSG00000078269.91460.464401010.366800.531404.665902.75880K562BUD13
SYNJ2ENSG00000078269.9980.03400794.883000.302002.144701.44550K562CPSF6
SYNJ2ENSG00000078269.92968.316902181.654200.444107.044705.50950K562CELF1
SYNJ2ENSG00000078269.91757.627501510.854800.218202.159001.57170K562DDX47
SYNJ2ENSG00000078269.91168.46930808.870400.530505.042003.88150K562FMR1
SYNJ2ENSG00000078269.91155.72820685.632200.753208.253906.58400K562FTO
SYNJ2ENSG00000078269.9964.05140758.878100.345102.453501.70370K562GPKOW
SYNJ2ENSG00000078269.91003.03850782.681600.357802.801102.20070K562HNRNPC
SYNJ2ENSG00000078269.91114.277801365.36490-0.293202.322901.36440K562HNRNPL
SYNJ2ENSG00000078269.9538.05180857.64520-0.672605.687404.29010K562HNRNPM
SYNJ2ENSG00000078269.9873.351201068.28290-0.290702.496301.64710K562HNRNPU
SYNJ2ENSG00000078269.91136.683001413.67100-0.314602.257701.53480K562HSPD1
SYNJ2ENSG00000078269.9932.82600648.091000.525303.222702.20720K562KRR1
SYNJ2ENSG00000078269.91074.38130740.766400.536305.474104.21660K562METAP2
SYNJ2ENSG00000078269.91545.058601251.965600.303404.556603.62800K562NSUN2
SYNJ2ENSG00000078269.9504.34600799.28130-0.664306.091004.97750K562PRPF8
SYNJ2ENSG00000078269.91128.626901519.51480-0.429003.891903.26330K562PUS1
SYNJ2ENSG00000078269.91084.860701480.44910-0.448505.774204.94420K562RBM15
SYNJ2ENSG00000078269.9969.85740721.864200.425902.720501.75490K562SF3B1
SYNJ2ENSG00000078269.91754.563801265.601700.471209.353507.74430K562SRPK2
SYNJ2ENSG00000078269.9820.60190665.297400.302602.226201.50600K562U2AF2
SYNJ2ENSG00000078269.91509.982001181.160400.354205.254804.12390K562WDR43
SYNJ2ENSG00000078269.92069.413101546.100600.420504.330703.21310K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SYNJ2 is not available on ENCORE database.





12 RBPs can affect the splicing of SYNJ2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESYNJ2ENSG00000078269.9chr6+158485857158486023158485632158485782158487475158487667-0.077000.000430.01000excludedHepG2U2AF1
SESYNJ2ENSG00000078269.9chr6+1584480031584481971584382351584383221584497871584500580.165000.006700.06689includedHepG2U2AF2
SESYNJ2ENSG00000078269.9chr6+1584480031584481971584382351584383221584497871584500580.121000.001150.01375includedK562AQR
SESYNJ2ENSG00000078269.9chr6+158510870158510979158509691158509804158513957158514136-0.079000.001720.02662excludedK562PUS1
SESYNJ2ENSG00000078269.9chr6+158499195158499313158497657158497814158502140158502359-0.395000.000330.00665excludedK562PUS1
SESYNJ2ENSG00000078269.9chr6+1584480031584481971584382351584383221584497871584500580.077000.000110.00890includedHepG2PTBP1
SESYNJ2ENSG00000078269.9chr6+1584480031584481971584382351584383221584497871584500580.220000.001190.06717includedHepG2FTO
SESYNJ2ENSG00000078269.9chr6+158507886158508021158505032158505206158509691158509804-0.103000.002550.06312excludedHepG2SF3A3
SESYNJ2ENSG00000078269.9chr6+158485857158486023158485632158485782158487475158487667-0.055000.000560.01952excludedHepG2SF3A3
SESYNJ2ENSG00000078269.9chr6+158499195158499313158497657158497814158502140158502359-0.253000.003170.07985excludedK562UTP18
SESYNJ2ENSG00000078269.9chr6+158499195158499313158497657158497814158502140158502359-0.285000.002910.06109excludedK562RBM15
SESYNJ2ENSG00000078269.9chr6+158510870158510979158509691158509804158513957158514136-0.149000.001410.02557excludedK562HNRNPC
A5SSSYNJ2ENSG00000078269.9chr6+1584830861584832531584830861584831961584848221584849040.073000.000800.01536longerK562AQR
A5SSSYNJ2ENSG00000078269.9chr6+1584830231584832531584830231584831961584848221584849040.221000.000000.00004longerHepG2SF3A3
MXESYNJ2ENSG00000078269.9chr6+158464347158464431158475998158476060158454486158454712158480288158480385-0.281000.002630.044882includedHepG2U2AF1
MXESYNJ2ENSG00000078269.9chr6+158449787158450058158454486158454712158438235158438322158464347158464431-0.198000.014220.083962includedK562AQR
MXESYNJ2ENSG00000078269.9chr6+1584802881584803851584830231584831961584759981584760601584848221584849040.284000.001910.024641includedHepG2SFPQ
MXESYNJ2ENSG00000078269.9chr6+1584497871584500581584544861584547121584382351584383221584643471584644310.179000.001300.050031includedK562AKAP8L

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SYNJ2 is not avaliable on ENCORE database.