SOGA2

General Information

Gene Name       : SOGA2
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SOGA2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SOGA2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SOGA2 RNA is bound by 14 proteins.  







eCLIP assay for SOGA2 is not avaliable on ENCORE database.





14 proteins are bound to SOGA2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1887836598783803+3'-UTR,CDS4.677374.93122K562SLTM
chr1887837728783844+3'-UTR,CDS4.689885.01312K562UCHL5
chr1887835248783585+3'-UTR,5'-UTR,CDS,intron-Proximal4.018066.68017K562UCHL5
chr1887837608783820+3'-UTR,CDS3.905713.03355K562METAP2
chr1888324398832513+3'-UTR3.927938.27513K562PUM2
chr1887778638777892+3'-UTR,CDS,intron-Proximal3.831783.01428K562UCHL5
chr1887184248718483+3'-UTR,5'-UTR,CDS4.542514.78571K562UCHL5
chr1887842808784321+3'-UTR,CDS4.013063.59941K562UCHL5
chr1888129878813074+CDS3.242786.28688K562UCHL5
chr1888131508813225+CDS3.305323.61259K562ZNF622
chr1887057368705893+CDS3.487166.10629K562PUM1
chr1887065798706701+CDS3.440953.99381K562BUD13
chr1888131468813238+CDS,intron-Proximal4.854605.50697K562UCHL5
chr1887066248706690+CDS4.176484.67299K562DDX24
chr1887058538705953+CDS3.010196.82147K562GEMIN5
chr1887628108762892+intron-Distal3.587263.95937K562UCHL5
chr1887606978760755+intron-Distal3.882713.08314K562TARDBP
chr1887255438725682+intron-Distal3.480085.78064K562KHSRP
chr1887744968774550+intron-Distal4.261573.18981K562PTBP1
chr1887627628762915+intron-Distal5.532627.72954K562SLTM
chr1887215368721606+intron-Distal3.646884.91585K562RBFOX2
chr1887234118723534+intron-Distal4.353513.34609K562TARDBP
chr1887278408727968+intron-Distal5.360817.91717K562PTBP1
chr1887632548763343+intron-Distal3.476063.95937K562UCHL5
chr1887418358741919+intron-Distal4.660736.87697K562NONO
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SOGA2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SOGA2 is not available on ENCORE database.

  • 142 RBPs can affect the levels of SOGA2.  








The Knockdown/knockout RNA-Seq assay for SOGA2 is not available on ENCORE database.





142 RBPs can affect the gene expression of SOGA2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SOGA2ENSG00000168502.13310.44510171.861400.853003.447101.53110HepG2AARS
SOGA2ENSG00000168502.13127.25380293.23350-1.204306.690805.29930HepG2ABCF1
SOGA2ENSG00000168502.13422.43260259.107000.705107.036306.15650HepG2ACO1
SOGA2ENSG00000168502.1379.12810174.97680-1.144906.135104.72660HepG2ADAR
SOGA2ENSG00000168502.13186.6525045.708602.0297011.5681010.55380HepG2AKAP1
SOGA2ENSG00000168502.13289.44440157.918100.874005.308603.88130HepG2AKAP8
SOGA2ENSG00000168502.13349.35100260.331700.424202.571701.82910HepG2AKAP8L
SOGA2ENSG00000168502.1381.4275037.816901.106402.934902.12740HepG2ASCC1
SOGA2ENSG00000168502.13614.17340382.120400.684508.358307.27330HepG2AUH
SOGA2ENSG00000168502.13240.74620428.21840-0.830806.617405.73870HepG2BOP1
SOGA2ENSG00000168502.13194.82650259.05950-0.411102.086201.49680HepG2CKAP4
SOGA2ENSG00000168502.13191.59640393.13550-1.037008.434307.28900HepG2CPSF6
SOGA2ENSG00000168502.13348.04680241.587400.526603.158501.97730HepG2CPSF7
SOGA2ENSG00000168502.1351.38300108.27380-1.075304.061902.78600HepG2CSTF2
SOGA2ENSG00000168502.13166.7613095.710000.800903.016901.58040HepG2CSTF2T
SOGA2ENSG00000168502.13519.38510205.274101.3392022.4631020.99160HepG2CELF1
SOGA2ENSG00000168502.13163.63740239.64090-0.550403.371002.46140HepG2DDX19B
SOGA2ENSG00000168502.1352.71400100.84260-0.935802.926901.98460HepG2DDX24
SOGA2ENSG00000168502.13127.1232043.778701.537806.448905.53460HepG2DDX3X
SOGA2ENSG00000168502.13191.36920105.671200.856704.245802.60040HepG2DDX52
SOGA2ENSG00000168502.13497.60380172.415901.5290011.082309.65870HepG2DDX55
SOGA2ENSG00000168502.13153.6880037.622702.0302010.996309.85930HepG2DDX6
SOGA2ENSG00000168502.1366.62390169.93450-1.350907.958206.38200HepG2DHX30
SOGA2ENSG00000168502.1362.21570247.89750-1.9944020.6020019.15530HepG2DKC1
SOGA2ENSG00000168502.1386.16770176.18460-1.031905.915404.91940HepG2DNAJC21
SOGA2ENSG00000168502.13269.29470174.648400.624604.308503.52760HepG2DNAJC2
SOGA2ENSG00000168502.13260.1488036.151802.8471027.9674026.21260HepG2EIF2S1
SOGA2ENSG00000168502.13322.7012038.906003.0520029.5865027.53080HepG2EIF4B
SOGA2ENSG00000168502.13104.14490217.74920-1.064106.787005.58010HepG2EIF4G1
SOGA2ENSG00000168502.1369.47190254.08020-1.8708016.1073013.82260HepG2ESF1
SOGA2ENSG00000168502.13426.56780253.201700.752406.357905.09180HepG2EWSR1
SOGA2ENSG00000168502.1333.5239096.51280-1.525505.252902.60230HepG2FASTKD1
SOGA2ENSG00000168502.13645.41350296.116701.1240011.170309.77050HepG2FIP1L1
SOGA2ENSG00000168502.1382.14780143.49420-0.804702.938801.63190HepG2FKBP4
SOGA2ENSG00000168502.13122.03940393.79340-1.690108.829407.03630HepG2FTO
SOGA2ENSG00000168502.13221.75870123.902600.839703.817402.51010HepG2FUS
SOGA2ENSG00000168502.13240.1644040.325302.5742022.8318021.05820HepG2FXR1
SOGA2ENSG00000168502.13158.0108037.395502.0790012.8673011.48690HepG2G3BP1
SOGA2ENSG00000168502.13206.12280445.67080-1.112509.263308.13600HepG2GPKOW
SOGA2ENSG00000168502.1362.64460177.87270-1.505608.421507.38380HepG2HNRNPA1
SOGA2ENSG00000168502.13282.15850202.831400.476102.695501.76970HepG2HNRNPA2B1
SOGA2ENSG00000168502.1387.20990197.85700-1.181906.358305.34130HepG2HNRNPC
SOGA2ENSG00000168502.1340.7827095.74430-1.231204.346502.44660HepG2HNRNPD
SOGA2ENSG00000168502.13200.65690549.79870-1.4542015.2973013.78860HepG2HNRNPF
SOGA2ENSG00000168502.1385.7525037.894701.178103.215902.46400HepG2HNRNPK
SOGA2ENSG00000168502.13139.94030201.01270-0.522502.225401.61110HepG2HNRNPL
SOGA2ENSG00000168502.13138.25020425.31000-1.6212017.6456016.25430HepG2HNRNPLL
SOGA2ENSG00000168502.13300.65470204.366500.556803.199202.18340HepG2HNRNPM
SOGA2ENSG00000168502.13193.54550541.40430-1.4840013.5788012.10060HepG2IGF2BP1
SOGA2ENSG00000168502.13117.3614038.007401.626506.902005.88190HepG2IGF2BP2
SOGA2ENSG00000168502.13213.6919035.685702.582009.354907.63200HepG2IGF2BP3
SOGA2ENSG00000168502.1354.40280105.37010-0.953703.098501.82150HepG2KHDRBS1
SOGA2ENSG00000168502.13182.72080108.607500.750403.642701.78160HepG2CCAR2
SOGA2ENSG00000168502.13172.36100236.86180-0.458602.348601.40820HepG2KIF1C
SOGA2ENSG00000168502.13326.18990120.167801.4406014.1871011.82190HepG2LARP7
SOGA2ENSG00000168502.13126.1516040.561501.636902.238901.66760HepG2MATR3
SOGA2ENSG00000168502.13248.41520107.072701.214105.272803.85280HepG2METAP2
SOGA2ENSG00000168502.13387.32100239.750800.691905.199704.11710HepG2MSI2
SOGA2ENSG00000168502.13184.15620433.71490-1.235808.336406.61980HepG2MTPAP
SOGA2ENSG00000168502.13173.1994041.513902.060708.489607.41010HepG2NCBP2
SOGA2ENSG00000168502.13264.72700162.971900.699803.148201.62300HepG2NKRF
SOGA2ENSG00000168502.1347.28460377.10330-2.9955038.1175035.87930HepG2NSUN2
SOGA2ENSG00000168502.13363.25370194.541100.900808.793407.42360HepG2PARN
SOGA2ENSG00000168502.13172.9246035.238302.2948017.2307015.92390HepG2PCBP1
SOGA2ENSG00000168502.1393.29990175.30430-0.909904.978604.01820HepG2PPIL4
SOGA2ENSG00000168502.1353.44590232.80030-2.1229022.7164020.88050HepG2PRPF4
SOGA2ENSG00000168502.13417.0549035.857603.5398024.5119023.19180HepG2PTBP1
SOGA2ENSG00000168502.13133.52430208.90270-0.645702.750802.15570HepG2PUF60
SOGA2ENSG00000168502.13364.43560221.771900.716507.158906.29630HepG2PUM1
SOGA2ENSG00000168502.13148.80410263.91860-0.826706.319205.45700HepG2PUS1
SOGA2ENSG00000168502.13222.28560113.129900.974303.751902.93610HepG2RAVER1
SOGA2ENSG00000168502.13613.69110330.500500.892803.364502.42730HepG2RBM15
SOGA2ENSG00000168502.13613.08200366.705400.741408.508607.71600HepG2RBM22
SOGA2ENSG00000168502.1392.8060035.243501.396804.969904.09020HepG2RBM25
SOGA2ENSG00000168502.13183.8619039.905002.203907.139406.34000HepG2NELFE
SOGA2ENSG00000168502.13117.0361037.168001.654703.839303.12890HepG2RECQL
SOGA2ENSG00000168502.13436.86000592.12510-0.438702.482501.82980HepG2RPLP0
SOGA2ENSG00000168502.1329.42270111.21010-1.918308.177606.62680HepG2RPS10
SOGA2ENSG00000168502.13238.6956099.570901.261308.919507.89160HepG2RPS19
SOGA2ENSG00000168502.13231.44850133.644000.792203.069602.22720HepG2RPS2
SOGA2ENSG00000168502.13368.04340136.409701.4318014.1615011.77180HepG2RPS5
SOGA2ENSG00000168502.13223.11630131.491100.762702.848702.05170HepG2RRP9
SOGA2ENSG00000168502.13105.29450175.03120-0.733203.606402.88780HepG2SAFB2
SOGA2ENSG00000168502.1355.41280104.55980-0.916002.866001.53230HepG2SART3
SOGA2ENSG00000168502.1337.10850105.45350-1.506805.499003.38080HepG2SBDS
SOGA2ENSG00000168502.13186.6883099.913500.901804.120102.97710HepG2SERBP1
SOGA2ENSG00000168502.13125.89650420.98500-1.7415020.8034019.06450HepG2SF3B1
SOGA2ENSG00000168502.13240.0095037.330102.6846027.9816026.43940HepG2SF3B4
SOGA2ENSG00000168502.13600.60680201.185201.577805.655103.46610HepG2SFPQ
SOGA2ENSG00000168502.1389.81370200.33060-1.157407.722806.63990HepG2SLBP
SOGA2ENSG00000168502.13446.01700204.109501.1277016.0596014.70240HepG2SMN1
SOGA2ENSG00000168502.13235.48870115.590801.026505.873704.43950HepG2SMNDC1
SOGA2ENSG00000168502.13208.15850468.41530-1.170108.184106.84100HepG2SNRNP70
SOGA2ENSG00000168502.13563.22090414.173100.443403.790603.23230HepG2SRFBP1
SOGA2ENSG00000168502.13193.5889038.965502.3126018.4106017.41640HepG2SRSF1
SOGA2ENSG00000168502.13386.08940206.275900.904309.663008.58710HepG2SRSF5
SOGA2ENSG00000168502.13242.62620540.12610-1.1546011.3187010.07590HepG2SRSF7
SOGA2ENSG00000168502.1341.28970359.58780-3.1225053.7013052.14690HepG2SSB
SOGA2ENSG00000168502.1391.27100197.87170-1.116304.409202.87870HepG2STAU1
SOGA2ENSG00000168502.13547.89110234.579801.223707.175406.25430HepG2SUCLG1
SOGA2ENSG00000168502.13365.75600171.616501.091606.483305.51450HepG2SUPV3L1
SOGA2ENSG00000168502.1392.0627035.026301.394105.302504.56780HepG2TAF15
SOGA2ENSG00000168502.13297.25180414.48970-0.479702.567601.86510HepG2TARDBP
SOGA2ENSG00000168502.1383.33180168.26900-1.013803.207502.06140HepG2TBRG4
SOGA2ENSG00000168502.13206.96810115.015800.847503.422402.32490HepG2TFIP11
SOGA2ENSG00000168502.1369.02670190.95910-1.4680010.638009.76740HepG2TIAL1
SOGA2ENSG00000168502.13252.32440192.692300.388901.825001.34790HepG2TRIM56
SOGA2ENSG00000168502.13437.71590215.473601.022402.701201.72540HepG2U2AF2
SOGA2ENSG00000168502.13446.27470216.059901.046404.586303.48970HepG2UBE2L3
SOGA2ENSG00000168502.13200.91860101.364900.987005.071404.03650HepG2UCHL5
SOGA2ENSG00000168502.1365.66990157.09310-1.258305.607104.13940HepG2UPF2
SOGA2ENSG00000168502.1336.0293099.45920-1.464905.654204.08830HepG2XPO5
SOGA2ENSG00000168502.13193.39740111.324500.796702.783001.51170HepG2XRCC5
SOGA2ENSG00000168502.13227.00930124.456700.867004.106602.82200HepG2XRCC6
SOGA2ENSG00000168502.1337.30770168.93820-2.1789014.4114012.77850HepG2XRN2
SOGA2ENSG00000168502.13121.24720229.74730-0.922106.529205.56890HepG2ZC3H8
SOGA2ENSG00000168502.13211.88620122.098300.795103.249102.67080HepG2ZNF622
SOGA2ENSG00000168502.13607.33240345.187000.815007.686205.67350K562ABCF1
SOGA2ENSG00000168502.13552.86780453.047500.287201.891701.40540K562AGGF1
SOGA2ENSG00000168502.13387.57600494.64430-0.351902.110001.31990K562ATP5C1
SOGA2ENSG00000168502.13362.64990217.329400.738606.157104.70500K562BCLAF1
SOGA2ENSG00000168502.13475.81450268.863900.823406.480605.13270K562BOP1
SOGA2ENSG00000168502.13694.37070470.190100.562403.478901.83480K562CKAP4
SOGA2ENSG00000168502.13676.91370453.233600.578604.091602.72830K562CPEB4
SOGA2ENSG00000168502.13594.99410285.841201.0576013.4420011.69730K562CPSF6
SOGA2ENSG00000168502.13260.57650164.876700.660203.529402.31570K562CSTF2
SOGA2ENSG00000168502.13628.99240430.999800.545305.201303.50120K562DDX21
SOGA2ENSG00000168502.13277.52380190.587600.542103.389301.90850K562DDX27
SOGA2ENSG00000168502.13684.97490468.898100.546706.114205.19860K562DDX47
SOGA2ENSG00000168502.13383.72740507.25140-0.402602.768001.89390K562DKC1
SOGA2ENSG00000168502.13899.22000599.983600.583707.056905.57380K562EIF4G2
SOGA2ENSG00000168502.13379.45020246.605300.621603.683302.61450K562FTO
SOGA2ENSG00000168502.13162.48060321.99500-0.986808.714707.71380K562FXR1
SOGA2ENSG00000168502.13375.79150201.940900.895905.941303.85070K562GEMIN5
SOGA2ENSG00000168502.13367.74350272.877400.430302.093801.39890K562GPKOW
SOGA2ENSG00000168502.13418.87290305.410900.455702.915201.81220K562HNRNPA1
SOGA2ENSG00000168502.1397.13340204.12830-1.071405.444004.08130K562HNRNPM
SOGA2ENSG00000168502.13221.46870336.43010-0.603203.331402.46080K562HSPD1
SOGA2ENSG00000168502.13370.19300238.175400.636203.368602.19490K562IGF2BP2
SOGA2ENSG00000168502.13378.30590233.083500.698603.531702.46260K562KRR1
SOGA2ENSG00000168502.13410.77130560.44050-0.448202.712401.81530K562MBNL1
SOGA2ENSG00000168502.13664.14610401.147200.727309.775008.35590K562MTPAP
SOGA2ENSG00000168502.13274.54050392.82980-0.516902.145801.39170K562NAA15
SOGA2ENSG00000168502.13756.92990445.695500.7640012.9313011.48190K562NSUN2
SOGA2ENSG00000168502.13420.75660616.50620-0.551104.695902.88570K562PNPT1
SOGA2ENSG00000168502.1363.80800195.99990-1.619005.353904.30820K562PRPF8
SOGA2ENSG00000168502.13123.09890243.08360-0.981607.184306.15200K562PTBP1
SOGA2ENSG00000168502.13446.50420654.61670-0.552004.557803.51390K562PUF60
SOGA2ENSG00000168502.13259.46400467.48440-0.849406.182605.41020K562PUS1
SOGA2ENSG00000168502.13324.12020455.52330-0.491003.263802.62820K562RBM15
SOGA2ENSG00000168502.13520.02250348.408100.577703.694801.56820K562SAFB2
SOGA2ENSG00000168502.13139.83690267.07730-0.933506.035004.43090K562SAFB
SOGA2ENSG00000168502.13714.81140439.810100.700609.171407.75160K562SF3A3
SOGA2ENSG00000168502.13385.37190259.627600.569702.877501.88380K562SF3B1
SOGA2ENSG00000168502.13629.38750450.597000.482004.905203.70390K562SRPK2
SOGA2ENSG00000168502.13118.62960238.31690-1.006406.589505.50850K562SRSF1
SOGA2ENSG00000168502.13532.48590384.603700.469303.992802.56480K562SRSF7
SOGA2ENSG00000168502.13139.97370300.61670-1.102808.223306.79920K562SYNCRIP
SOGA2ENSG00000168502.13482.33240290.216100.732805.673903.55920K562TRIP6
SOGA2ENSG00000168502.13335.86760200.764200.742304.172902.89730K562UCHL5
SOGA2ENSG00000168502.13660.04710472.581500.481904.961204.02950K562UPF1
SOGA2ENSG00000168502.13517.98880307.768900.751003.585302.21020K562UTP3
SOGA2ENSG00000168502.13622.46770404.371100.622205.877004.57870K562WDR3
SOGA2ENSG00000168502.13569.79230420.512500.438204.133603.11410K562WDR43
SOGA2ENSG00000168502.13647.85420465.527300.476703.806102.28260K562WRN
SOGA2ENSG00000168502.13661.64840442.477900.580405.178303.93690K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SOGA2 is not available on ENCORE database.





2 RBPs can affect the splicing of SOGA2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
RISOGA2ENSG00000168502.13chr18+8809445881000088094458809559880996888100000.480000.001690.07860includedK562PPIL4
RISOGA2ENSG00000168502.13chr18+8809445881000088094458809559880996888100000.476000.002660.09241includedK562SBDS

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SOGA2 is not avaliable on ENCORE database.