SLC1A2

General Information

Gene Name       : SLC1A2
Gene ID             : ENSG00000110436.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SLC1A2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SLC1A2ENSG00000110436.120.410.010.21ENCSR000AEF
HepG2SLC1A2ENSG00000110436.125.015.925.46ENCSR985KAT
K562SLC1A2ENSG00000110436.120.020.000.01ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SLC1A2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SLC1A2 RNA is bound by 14 proteins.  







eCLIP assay for SLC1A2 is not avaliable on ENCORE database.





14 proteins are bound to SLC1A2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr113527873735278752-3'-UTR,intron-Distal6.2619818.25210HepG2LIN28B
chr113528227635282330-3'-UTR,intron-Distal,intron-Proximal3.547225.22258HepG2TIAL1
chr113527424735274302-3'-UTR,intron-Distal3.890185.96245HepG2FUBP3
chr113528081035280860-3'-UTR,intron-Distal4.093223.70369HepG2LIN28B
chr113527454435274618-3'-UTR,intron-Distal4.5383610.09100HepG2LIN28B
chr113527416735274235-3'-UTR,intron-Distal3.455363.82357HepG2TIAL1
chr113527568835275734-3'-UTR,intron-Distal5.564056.15718HepG2FUBP3
chr113528125835281329-3'-UTR,intron-Distal4.577824.49605HepG2UPF1
chr113527406435274145-3'-UTR,intron-Distal5.134337.77386HepG2FUBP3
chr113527416235274241-3'-UTR,intron-Distal4.077638.98547HepG2FUBP3
chr113527568435275731-3'-UTR,intron-Distal3.605393.03253HepG2TIA1
chr113528019735280261-3'-UTR,intron-Distal3.797023.06143HepG2IGF2BP1
chr113528007735280117-3'-UTR,intron-Distal4.041743.07786HepG2UPF1
chr113527872335278834-3'-UTR,intron-Distal3.133023.70296HepG2GRSF1
chr113527866335278737-3'-UTR,intron-Distal5.1380223.71086HepG2LIN28B
chr113528210435282147-3'-UTR,intron-Distal4.146753.35877HepG2UPF1
chr113527638735276441-3'-UTR,intron-Distal3.139053.67032HepG2IGF2BP1
chr113527875235278799-3'-UTR,intron-Distal4.6262910.09100HepG2LIN28B
chr113528684335286981-3'-UTR,intron-Distal,intron-Proximal5.439368.25921HepG2DROSHA
chr113527430235274367-3'-UTR,intron-Distal4.528386.03781HepG2FUBP3
chr113532308235323109-CDS,intron-Distal,intron-Proximal3.176666.33024HepG2BCLAF1
chr113532306235323082-CDS,intron-Distal,intron-Proximal3.503087.42278HepG2BCLAF1
chr113530829735308385-CDS,intron-Distal,intron-Proximal4.5796214.65888HepG2BCLAF1
chr113531396335314037-CDS,intron-Distal4.054223.70369HepG2LIN28B
chr113530236635302556-CDS,intron-Distal,intron-Proximal3.437704.13746HepG2PPIG
chr113530839535308433-CDS,intron-Distal,intron-Proximal3.191534.34695HepG2BCLAF1
chr113528351035283573-intron-Distal3.620923.98694HepG2DROSHA
chr113529225835292308-intron-Distal3.809023.39864HepG2SUGP2
chr113528601335286083-intron-Distal4.257384.43431HepG2RBFOX2
chr113528611035286179-intron-Distal3.292583.73413HepG2RBFOX2
chr113528335735283443-intron-Distal,intron-Proximal4.662558.58854HepG2RBFOX2
chr113528328935283473-intron-Distal,intron-Proximal6.5928747.49858HepG2DROSHA
chr113538075335380813-intron-Distal3.616373.62357HepG2U2AF2
chr113528344935283502-intron-Distal4.9490513.73067HepG2RBFOX2
chr113528604435286125-intron-Distal4.710023.96814HepG2DROSHA
chr113529354835293632-intron-Distal4.674443.62238HepG2MATR3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SLC1A2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SLC1A2 is not available on ENCORE database.

  • 147 RBPs can affect the levels of SLC1A2.  








The Knockdown/knockout RNA-Seq assay for SLC1A2 is not available on ENCORE database.





147 RBPs can affect the gene expression of SLC1A2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SLC1A2ENSG00000110436.71236.277201829.55980-0.565507.061005.43580HepG2AATF
SLC1A2ENSG00000110436.72939.951502039.192400.527704.168303.02870HepG2ABCF1
SLC1A2ENSG00000110436.7606.007902645.60040-2.12620159.05570156.38540HepG2ACO1
SLC1A2ENSG00000110436.72440.996701161.048701.071908.468506.84100HepG2ADAR
SLC1A2ENSG00000110436.7120.063808490.17380-6.1439099999.9999999999.99999HepG2AKAP1
SLC1A2ENSG00000110436.71598.990003474.12570-1.1195013.8107011.70270HepG2AKAP8
SLC1A2ENSG00000110436.75468.052107024.98860-0.361503.149002.31030HepG2ASCC1
SLC1A2ENSG00000110436.73620.407902171.785100.737205.940304.99590HepG2AUH
SLC1A2ENSG00000110436.71264.62050533.947001.243809.053008.04820HepG2BOP1
SLC1A2ENSG00000110436.72065.445801643.599800.329503.407702.56290HepG2CALR
SLC1A2ENSG00000110436.72731.863704324.17170-0.662504.215001.81130HepG2CDC40
SLC1A2ENSG00000110436.79662.702406674.196100.533706.689405.52070HepG2CIRBP
SLC1A2ENSG00000110436.74396.642902645.007600.7330034.7895033.03260HepG2CKAP4
SLC1A2ENSG00000110436.7911.98720490.140700.895703.666402.88550HepG2CPSF6
SLC1A2ENSG00000110436.71020.905301931.91170-0.9202026.5691024.99730HepG2CELF1
SLC1A2ENSG00000110436.73705.600802077.504700.8348039.9913037.82590HepG2DAZAP1
SLC1A2ENSG00000110436.7519.049901192.31330-1.1998029.3093026.33400HepG2DDX1
SLC1A2ENSG00000110436.7584.405802018.32940-1.7881056.6234054.21840HepG2DDX21
SLC1A2ENSG00000110436.73678.783801975.281200.8971022.5648020.24110HepG2DDX24
SLC1A2ENSG00000110436.72304.747708133.12160-1.8192057.6353055.12920HepG2DDX3X
SLC1A2ENSG00000110436.7819.179701430.44070-0.8042013.3317010.77300HepG2DDX52
SLC1A2ENSG00000110436.7298.05340961.86050-1.690307.398806.20530HepG2DDX55
SLC1A2ENSG00000110436.71657.89930556.607901.5745013.1321011.11110HepG2DDX59
SLC1A2ENSG00000110436.73606.124201901.873100.9229015.0434012.95280HepG2DDX5
SLC1A2ENSG00000110436.72223.462906986.10210-1.6517041.0708039.11260HepG2DDX6
SLC1A2ENSG00000110436.71701.810001127.624500.593707.622206.06970HepG2DHX30
SLC1A2ENSG00000110436.75873.881402531.118101.2144017.7208016.34230HepG2DKC1
SLC1A2ENSG00000110436.72215.712801169.141600.9222017.0380015.43410HepG2DNAJC21
SLC1A2ENSG00000110436.7981.994901158.76780-0.238802.516801.88890HepG2DNAJC2
SLC1A2ENSG00000110436.71158.428401706.82210-0.559104.677703.50610HepG2EEF2
SLC1A2ENSG00000110436.72214.241606716.32390-1.6009045.4909043.32550HepG2EIF2S1
SLC1A2ENSG00000110436.71012.788501546.30360-0.610505.201903.62770HepG2EIF2S2
SLC1A2ENSG00000110436.7763.078101385.63390-0.8606010.086308.47050HepG2EIF3D
SLC1A2ENSG00000110436.72574.289201906.113300.433405.654404.18980HepG2EIF3G
SLC1A2ENSG00000110436.71361.266607226.48990-2.4083062.8846060.06090HepG2EIF4B
SLC1A2ENSG00000110436.74902.873402049.391801.2583071.4534068.46690HepG2EIF4G1
SLC1A2ENSG00000110436.74896.833101963.221001.3185035.8158033.31450HepG2EIF4G2
SLC1A2ENSG00000110436.73659.025801765.945901.0509022.1335019.57190HepG2ESF1
SLC1A2ENSG00000110436.71960.204902585.20850-0.399302.778401.94190HepG2EWSR1
SLC1A2ENSG00000110436.72743.615203593.96500-0.389504.193401.71970HepG2EXOSC5
SLC1A2ENSG00000110436.7700.806402058.92910-1.5548014.4690012.93700HepG2FIP1L1
SLC1A2ENSG00000110436.71994.58570800.713601.3166026.6122023.43380HepG2FKBP4
SLC1A2ENSG00000110436.72866.58240491.088502.5452018.2350015.78990HepG2FTO
SLC1A2ENSG00000110436.7898.826102700.04780-1.586906.708305.03240HepG2FUS
SLC1A2ENSG00000110436.71102.136207488.41290-2.76440123.58420120.05370HepG2FXR1
SLC1A2ENSG00000110436.72763.443106946.92020-1.3299029.5826027.48290HepG2G3BP1
SLC1A2ENSG00000110436.7714.251201233.75020-0.788505.230603.99590HepG2GEMIN5
SLC1A2ENSG00000110436.71035.941601764.75690-0.768504.039702.80770HepG2GNB2L1
SLC1A2ENSG00000110436.72322.75560555.471002.0640021.0996019.50690HepG2GPKOW
SLC1A2ENSG00000110436.71388.611702653.72840-0.934409.561707.50940HepG2GRSF1
SLC1A2ENSG00000110436.71589.794202525.78020-0.6679018.5468016.41490HepG2HDGF
SLC1A2ENSG00000110436.71410.735502423.93500-0.780907.309404.99340HepG2HNRNPA0
SLC1A2ENSG00000110436.72671.124901180.341701.1781029.8581028.15520HepG2HNRNPA1
SLC1A2ENSG00000110436.71546.572302367.02540-0.614005.324703.34270HepG2HNRNPAB
SLC1A2ENSG00000110436.71818.635801312.895400.470004.997104.08560HepG2HNRNPC
SLC1A2ENSG00000110436.73282.80470619.478102.40570181.30920177.70180HepG2HNRNPF
SLC1A2ENSG00000110436.73856.339907033.64100-0.8670017.9028016.28380HepG2HNRNPK
SLC1A2ENSG00000110436.72347.884201892.516100.311005.331204.42130HepG2HNRNPL
SLC1A2ENSG00000110436.72699.08630530.109002.3480062.2740059.94020HepG2HNRNPLL
SLC1A2ENSG00000110436.7403.313101420.11280-1.8160023.2340021.00850HepG2HNRNPM
SLC1A2ENSG00000110436.73950.03640609.995702.6949040.6637038.40350HepG2IGF2BP1
SLC1A2ENSG00000110436.71501.843106626.46140-2.1415020.7759018.36960HepG2IGF2BP3
SLC1A2ENSG00000110436.7872.577701332.21690-0.6105013.7118012.21500HepG2ILF2
SLC1A2ENSG00000110436.71733.672702794.71620-0.688905.508803.60530HepG2ILF3
SLC1A2ENSG00000110436.71711.148702731.41340-0.674706.523204.60050HepG2KHDRBS1
SLC1A2ENSG00000110436.74978.800607102.45610-0.512504.214402.95390HepG2KHSRP
SLC1A2ENSG00000110436.72827.310702418.399400.225302.231701.31410HepG2KIF1C
SLC1A2ENSG00000110436.72756.674503780.35190-0.455603.061501.74400HepG2KRR1
SLC1A2ENSG00000110436.7775.950801728.42900-1.155408.428506.54900HepG2LARP7
SLC1A2ENSG00000110436.73386.548007491.02460-1.1453024.1872022.36850HepG2MAGOH
SLC1A2ENSG00000110436.7806.869701464.24490-0.859705.509503.29420HepG2MARK2
SLC1A2ENSG00000110436.72326.387307533.04960-1.6951044.6530042.37460HepG2MATR3
SLC1A2ENSG00000110436.7344.531301450.24380-2.0736030.0667027.08390HepG2METAP2
SLC1A2ENSG00000110436.7265.872701665.63220-2.6473035.6239033.28140HepG2MSI2
SLC1A2ENSG00000110436.72082.00330540.952101.9443011.314909.35290HepG2MTPAP
SLC1A2ENSG00000110436.71058.979107710.57530-2.86420121.41440117.73420HepG2NCBP2
SLC1A2ENSG00000110436.72048.398903585.28220-0.807607.402905.11580HepG2NKRF
SLC1A2ENSG00000110436.71579.945602060.03730-0.382805.125204.09170HepG2NOL12
SLC1A2ENSG00000110436.73691.53820470.145902.97290144.50680140.92620HepG2NSUN2
SLC1A2ENSG00000110436.72475.140003427.01840-0.469405.678003.43330HepG2NUP35
SLC1A2ENSG00000110436.7959.857101756.00220-0.871406.315003.31100HepG2NUSAP1
SLC1A2ENSG00000110436.7529.168301035.96630-0.969207.523405.01750HepG2PA2G4
SLC1A2ENSG00000110436.71554.929002620.13950-0.752803.650602.61980HepG2PABPC1
SLC1A2ENSG00000110436.75461.411506867.13870-0.330402.586401.88590HepG2PABPC4
SLC1A2ENSG00000110436.7480.462301290.97180-1.4260047.6143045.01960HepG2PARN
SLC1A2ENSG00000110436.72014.815506621.03700-1.71640143.70980140.61400HepG2PCBP1
SLC1A2ENSG00000110436.75539.854402556.244901.1157013.4528011.44080HepG2PCBP2
SLC1A2ENSG00000110436.7618.199901145.87130-0.8903014.8280012.31150HepG2PKM
SLC1A2ENSG00000110436.75811.764101271.300902.19260131.80270128.47670HepG2PRPF4
SLC1A2ENSG00000110436.71150.63460742.479300.631905.861504.73470HepG2PRPF8
SLC1A2ENSG00000110436.7811.340506737.25020-3.0538099999.9999999999.99999HepG2PTBP1
SLC1A2ENSG00000110436.74470.380001966.423401.1847034.6731032.85770HepG2PUF60
SLC1A2ENSG00000110436.71135.557502087.37190-0.8783035.7187034.07920HepG2PUM1
SLC1A2ENSG00000110436.73884.108402085.892800.8968012.7369011.35940HepG2PUM2
SLC1A2ENSG00000110436.72193.259502694.71300-0.297105.077704.28890HepG2PUS1
SLC1A2ENSG00000110436.75265.778207296.40060-0.470509.611308.54720HepG2QKI
SLC1A2ENSG00000110436.71016.527402467.59010-1.279504.848003.92980HepG2RAVER1
SLC1A2ENSG00000110436.7810.941502083.84150-1.361604.723404.09220HepG2RBM22
SLC1A2ENSG00000110436.73098.441006622.03100-1.0957035.0621032.88590HepG2RBM25
SLC1A2ENSG00000110436.71108.088802084.11530-0.911405.235503.85340HepG2RBM27
SLC1A2ENSG00000110436.72911.693107497.83160-1.3646048.9323047.31440HepG2NELFE
SLC1A2ENSG00000110436.73990.239906983.35810-0.8074037.4905035.72560HepG2RECQL
SLC1A2ENSG00000110436.74434.78280667.531002.73190132.19710129.26890HepG2RPLP0
SLC1A2ENSG00000110436.7256.211501348.21520-2.3956057.9973055.85990HepG2RPS19
SLC1A2ENSG00000110436.71039.661301922.26350-0.886703.645702.73110HepG2RPS2
SLC1A2ENSG00000110436.7878.719801962.04490-1.158909.119307.18190HepG2RPS5
SLC1A2ENSG00000110436.71006.92910734.513000.455001.981101.30470HepG2RRP9
SLC1A2ENSG00000110436.74861.286602682.767900.857506.506004.23720HepG2RTF1
SLC1A2ENSG00000110436.71877.563301161.472300.6928019.4917018.00120HepG2SAFB2
SLC1A2ENSG00000110436.7723.806701353.25100-0.9028012.5881010.66380HepG2SERBP1
SLC1A2ENSG00000110436.72142.580304479.51230-1.064007.713606.54850HepG2SF3A3
SLC1A2ENSG00000110436.7860.39980524.621300.713602.312801.66490HepG2SF3B1
SLC1A2ENSG00000110436.71292.758307014.17230-2.43980267.78860264.10090HepG2SF3B4
SLC1A2ENSG00000110436.7606.134901747.45550-1.527506.016003.71750HepG2SFPQ
SLC1A2ENSG00000110436.74622.984601885.343001.2939039.0570037.07750HepG2SLBP
SLC1A2ENSG00000110436.7310.679001354.48940-2.12430110.11140107.37690HepG2SMN1
SLC1A2ENSG00000110436.71163.981602511.95890-1.109704.836803.53890HepG2SMNDC1
SLC1A2ENSG00000110436.73239.491302353.776800.460702.409201.93050HepG2SRFBP1
SLC1A2ENSG00000110436.71960.14040916.286001.0970019.3514015.89110HepG2SRP68
SLC1A2ENSG00000110436.72176.464007321.34870-1.75010172.28750170.07700HepG2SRSF1
SLC1A2ENSG00000110436.71445.98630564.727101.356307.691505.94650HepG2SRSF3
SLC1A2ENSG00000110436.73447.75650608.663302.50180200.72720197.29350HepG2SRSF7
SLC1A2ENSG00000110436.76872.327005956.368600.206303.367802.77110HepG2SRSF9
SLC1A2ENSG00000110436.79041.559202043.905502.1451071.8094070.09700HepG2SSB
SLC1A2ENSG00000110436.71199.124802503.88680-1.0622013.9398011.34610HepG2STIP1
SLC1A2ENSG00000110436.7599.601102208.06010-1.88070119.02150116.18490HepG2SUCLG1
SLC1A2ENSG00000110436.72191.54550957.657001.1943010.259409.09410HepG2SUPV3L1
SLC1A2ENSG00000110436.74558.890906580.91160-0.5296012.9427011.86540HepG2TAF15
SLC1A2ENSG00000110436.71628.55300517.068001.6551023.1425021.43620HepG2TARDBP
SLC1A2ENSG00000110436.74059.683606046.75120-0.574805.457104.29490HepG2TIA1
SLC1A2ENSG00000110436.71638.387601267.352200.370404.095203.51230HepG2TIAL1
SLC1A2ENSG00000110436.7933.385702476.49910-1.407805.403503.39450HepG2TRA2A
SLC1A2ENSG00000110436.7492.984101278.61470-1.3750047.1159045.16500HepG2TRIM56
SLC1A2ENSG00000110436.7701.320501101.09600-0.650805.284703.15410HepG2TROVE2
SLC1A2ENSG00000110436.7871.313501760.86400-1.015007.807206.75590HepG2U2AF1
SLC1A2ENSG00000110436.71026.012801874.58440-0.869502.491001.56130HepG2U2AF2
SLC1A2ENSG00000110436.71510.826102033.26180-0.428503.544202.59170HepG2UBE2L3
SLC1A2ENSG00000110436.73102.205803972.64410-0.356806.975005.94980HepG2UPF1
SLC1A2ENSG00000110436.71815.74950877.288601.049303.176502.09930HepG2UPF2
SLC1A2ENSG00000110436.73183.602004083.31120-0.359103.008701.92220HepG2UTP18
SLC1A2ENSG00000110436.71097.601103835.42950-1.80500134.17640131.04580HepG2UTP3
SLC1A2ENSG00000110436.71535.786402578.23660-0.747406.928205.19740HepG2XPO5
SLC1A2ENSG00000110436.71041.266602425.19720-1.219804.893103.20270HepG2XRCC5
SLC1A2ENSG00000110436.7457.368902712.96280-2.5684011.794609.77880HepG2XRCC6
SLC1A2ENSG00000110436.72471.61840942.704101.3905031.6006029.31680HepG2XRN2
SLC1A2ENSG00000110436.73531.137501254.474101.4930050.9955048.87340HepG2ZC3H8
SLC1A2ENSG00000110436.72797.667204369.14590-0.6431029.4649028.16770HepG2ZNF622
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SLC1A2 is not available on ENCORE database.





2 RBPs can affect the splicing of SLC1A2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESLC1A2ENSG00000110436.7chr11-353138333531406735308303353084983532306535323075-0.284000.000860.01239excludedHepG2U2AF2
SESLC1A2ENSG00000110436.7chr11-353024133530254835287073352873053530830335308334-0.197000.000540.01885excludedHepG2SF3A3
MXESLC1A2ENSG00000110436.7chr11-35313833353139093532306535323192353083033530849835327620353277890.193000.018270.086671includedHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SLC1A2 is not avaliable on ENCORE database.