PCNA

General Information

Gene Name       : PCNA
Gene ID             : ENSG00000132646.10
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: PCNA)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PCNAENSG00000132646.10307.19312.26309.73ENCSR000AEF
HepG2PCNAENSG00000132646.10562.63617.83590.23ENCSR985KAT
K562PCNAENSG00000132646.10207.64171.05189.34ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PCNA is not avaliable on ENCORE database.



Proteins bound to RNA
  • PCNA RNA is bound by 29 proteins.  







eCLIP assay for PCNA is not avaliable on ENCORE database.





29 proteins are bound to PCNA RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2050957555095783-3'-UTR,intron-Distal4.1543865.79350K562PUM2
chr2051004405100492-3'-UTR,5'-UTR,CDS,intron-Distal3.012288.47225HepG2GRWD1
chr2051004465100497-3'-UTR,5'-UTR,intron-Distal3.3402710.05198HepG2RPS3
chr2050956825095709-3'-UTR,intron-Distal4.9013718.36811K562PABPC4
chr2050956425095685-3'-UTR,intron-Distal4.446555.47244HepG2LARP4
chr2050957835095808-3'-UTR,intron-Distal6.0553467.95074K562PUM2
chr2051005225100589-3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.059633.02371K562EIF3G
chr2050957095095732-3'-UTR,intron-Distal3.7798245.26383K562PABPC4
chr2051003865100446-3'-UTR,5'-UTR,CDS,intron-Distal4.1941119.37201HepG2RPS3
chr2051004975100581-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.417565.35015HepG2EIF3D
chr2050957145095784-3'-UTR,intron-Distal5.3532613.59226K562PUM1
chr2050956405095682-3'-UTR,intron-Distal4.1555518.91607K562PABPC4
chr2050957325095762-3'-UTR,intron-Distal3.3270031.18874K562PABPC4
chr2051005035100575-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.068783.77224HepG2DDX3X
chr2051004075100496-3'-UTR,5'-UTR,CDS,intron-Distal4.1807125.10050K562GEMIN5
chr2051004935100581-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.7271133.38208K562DDX3X
chr2050957615095788-3'-UTR,intron-Distal4.960469.28335HepG2DDX55
chr2050956625095775-3'-UTR,intron-Distal4.3852821.56462K562TIA1
chr2050956975095783-3'-UTR,intron-Distal3.071935.68859HepG2ZC3H11A
chr2050957255095755-3'-UTR,intron-Distal3.4530137.98573K562PUM2
chr2050957095095734-3'-UTR,intron-Distal3.812968.07122HepG2DDX55
chr2051004345100513-3'-UTR,5'-UTR,CDS,intron-Distal4.1962416.62258K562RPS3
chr2050956565095709-3'-UTR,intron-Distal4.078213.43787HepG2DDX55
chr2050957345095761-3'-UTR,intron-Distal4.2822514.12906HepG2DDX55
chr2050958085095866-3'-UTR,intron-Distal4.5460370.69923K562PUM2
chr2051005275100572-3'-UTR,5'-UTR,intron-Distal,intron-Proximal5.096229.02823K562GEMIN5
chr2050957215095772-3'-UTR,intron-Distal4.411723.27240K562APOBEC3C
chr2051004095100493-3'-UTR,5'-UTR,CDS,intron-Distal3.385165.28657K562RBM15
chr2051005815100606-5'-UTR,intron-Distal,intron-Proximal3.077163.33365K562DDX3X
chr2051002165100236-CDS,intron-Distal,intron-Proximal4.8359325.65856HepG2AQR
chr2051001535100243-CDS,intron-Distal,intron-Proximal4.5982221.38823HepG2PRPF8
chr2050992575099272-CDS,intron-Distal3.188743.47684HepG2GRWD1
chr2050982925098309-CDS,intron-Distal3.119993.09129HepG2GRWD1
chr2050995015099509-CDS,intron-Distal3.7926914.02339K562YBX3
chr2051003735100410-CDS,intron-Distal3.469125.39456HepG2GRWD1
chr2051002255100314-CDS,intron-Distal3.143356.29472HepG2G3BP1
chr2051002255100331-CDS,intron-Distal4.0194621.94796HepG2RPS3
chr2051002325100281-CDS,intron-Distal3.1661210.78880K562YBX3
chr2051003015100355-CDS,intron-Distal4.5626214.92488K562YBX3
chr2051003925100434-CDS,intron-Distal5.064726.00342K562RPS3
chr2050981765098193-CDS,intron-Distal3.872824.59151HepG2G3BP1
chr2050994775099521-CDS,intron-Distal,intron-Proximal3.5295411.81551HepG2BUD13
chr2050993745099421-CDS,intron-Distal,intron-Proximal4.420676.04280HepG2PRPF8
chr2050994145099431-CDS,intron-Distal,intron-Proximal4.784425.71225HepG2G3BP1
chr2050994405099475-CDS,intron-Distal3.730926.67313HepG2BCLAF1
chr2050981805098256-CDS,intron-Distal4.874306.10169K562LIN28B
chr2050994245099460-CDS,intron-Distal4.126954.98210K562SND1
chr2050982885098310-CDS,intron-Distal3.919383.77614HepG2G3BP1
chr2050961985096217-CDS,intron-Distal3.948835.69815HepG2G3BP1
chr2050994825099488-CDS,intron-Distal3.8912615.00141K562YBX3
chr2050992175099277-CDS,intron-Distal,intron-Proximal5.280787.87148HepG2PRPF8
chr2050995095099512-CDS,intron-Distal4.1123213.07366K562YBX3
chr2050995085099570-CDS,intron-Distal,intron-Proximal4.028435.30069HepG2AQR
chr2051002235100232-CDS,intron-Distal,intron-Proximal3.4784111.95636K562YBX3
chr2050982055098311-CDS,intron-Distal,intron-Proximal3.457736.23043K562ZNF800
chr2050992265099270-CDS,intron-Distal,intron-Proximal3.6646213.99388HepG2BUD13
chr2050982695098317-CDS,intron-Distal,intron-Proximal3.663765.00154HepG2AQR
chr2051001035100154-intron-Distal,intron-Proximal5.0098214.75756HepG2RBM22
chr2051001145100164-intron-Distal,intron-Proximal6.4954012.75817HepG2EFTUD2
chr2051001755100224-intron-Distal,intron-Proximal3.208594.20978K562AQR
chr2050987355098807-intron-Distal3.588794.57207HepG2KHSRP
chr2051001065100142-intron-Distal,intron-Proximal3.338968.74912HepG2BUD13
chr2050991375099184-intron-Distal,intron-Proximal5.385416.44303K562AQR
chr2050991385099185-intron-Distal,intron-Proximal3.206366.40067K562PRPF8
chr2051000505100114-intron-Distal3.863299.55586HepG2EFTUD2
chr2051001895100216-intron-Distal,intron-Proximal4.8588325.65856HepG2AQR
chr2050991735099181-intron-Distal,intron-Proximal3.010064.55820HepG2HNRNPC
chr2051001815100189-intron-Distal,intron-Proximal5.4442721.22684HepG2AQR
chr2050987095098750-intron-Distal4.131253.16095HepG2U2AF2
chr2050993265099360-intron-Distal,intron-Proximal4.670656.01148HepG2EFTUD2
chr2050983565098444-intron-Distal,intron-Proximal4.272075.41654K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PCNA is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PCNA is not available on ENCORE database.

  • 142 RBPs can affect the levels of PCNA.  








The Knockdown/knockout RNA-Seq assay for PCNA is not available on ENCORE database.





142 RBPs can affect the gene expression of PCNA :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PCNAENSG00000132646.62232.787704503.09790-1.0121046.9051045.16380HepG2ACO1
PCNAENSG00000132646.64215.947603038.810300.472305.226903.92130HepG2ADAR
PCNAENSG00000132646.6948.957801331.14320-0.488203.280302.15250HepG2AKAP8
PCNAENSG00000132646.62727.062404524.10470-0.7303026.1121024.12680HepG2AKAP8L
PCNAENSG00000132646.62222.305203789.14910-0.7698011.167509.67180HepG2ASCC1
PCNAENSG00000132646.65115.969207121.56310-0.4772013.4917012.17700HepG2AUH
PCNAENSG00000132646.62479.815005494.08740-1.1476022.2178020.05550HepG2BCLAF1
PCNAENSG00000132646.63079.313005050.95880-0.713908.237107.00780HepG2CALR
PCNAENSG00000132646.62283.895803599.93080-0.656508.664007.35730HepG2CIRBP
PCNAENSG00000132646.63165.220304501.93880-0.5082017.9896016.61710HepG2CKAP4
PCNAENSG00000132646.61851.555905725.69990-1.6287041.8097039.58570HepG2CPSF6
PCNAENSG00000132646.62929.085703628.64900-0.309002.761301.65900HepG2CPSF7
PCNAENSG00000132646.67004.158803905.857100.8425017.7844015.48180HepG2CSTF2
PCNAENSG00000132646.65316.615807491.13370-0.4947011.4872010.35290HepG2CELF1
PCNAENSG00000132646.65368.142708055.61330-0.5856029.2115027.29730HepG2DAZAP1
PCNAENSG00000132646.63331.506504164.63740-0.322007.110605.87710HepG2DDX19B
PCNAENSG00000132646.63349.227104499.50140-0.425905.176503.91830HepG2DDX24
PCNAENSG00000132646.62905.672504386.87800-0.594306.911605.96520HepG2DDX3X
PCNAENSG00000132646.63397.219806216.10940-0.8717012.0393010.56540HepG2DDX55
PCNAENSG00000132646.63439.970906502.00530-0.918507.478505.91450HepG2DDX59
PCNAENSG00000132646.61387.372103768.07920-1.4415029.2908027.60000HepG2DDX6
PCNAENSG00000132646.61896.015302951.27440-0.638407.290605.76640HepG2DHX30
PCNAENSG00000132646.62307.448503059.86380-0.407206.939605.86560HepG2DNAJC21
PCNAENSG00000132646.62060.271903033.00660-0.5579017.9093016.38780HepG2DNAJC2
PCNAENSG00000132646.62508.187603282.74100-0.388303.564302.29700HepG2EFTUD2
PCNAENSG00000132646.62127.175204234.29370-0.9932013.5771011.34700HepG2AGO1
PCNAENSG00000132646.6854.737103622.68310-2.0835065.7166063.26590HepG2EIF2S1
PCNAENSG00000132646.61807.275803196.67030-0.8228012.4817010.71510HepG2EIF3D
PCNAENSG00000132646.63561.548204342.70140-0.286102.753901.67450HepG2EIF3G
PCNAENSG00000132646.62979.621703897.80750-0.387502.294301.66480HepG2EIF4B
PCNAENSG00000132646.65768.879207946.66310-0.4621013.4551011.88690HepG2EIF4G1
PCNAENSG00000132646.63995.765408176.66420-1.0330056.8323054.76470HepG2ETF1
PCNAENSG00000132646.62288.542002857.21770-0.320203.730202.35430HepG2FAM120A
PCNAENSG00000132646.63404.326804382.68140-0.364403.867102.54870HepG2FASTKD2
PCNAENSG00000132646.61467.821204448.57920-1.5997036.8926034.71520HepG2FIP1L1
PCNAENSG00000132646.62217.897005735.84420-1.3708010.086208.17280HepG2FTO
PCNAENSG00000132646.66111.743704039.025300.597507.599106.49530HepG2FXR1
PCNAENSG00000132646.62146.094503747.04790-0.8040010.950109.66920HepG2G3BP1
PCNAENSG00000132646.64003.065504959.05180-0.309002.496301.53510HepG2GNB2L1
PCNAENSG00000132646.62557.216106490.09190-1.3437030.7922028.93620HepG2GPKOW
PCNAENSG00000132646.61863.287301227.961400.601504.203802.83600HepG2GRSF1
PCNAENSG00000132646.63677.015804299.05990-0.225503.144502.10750HepG2HDGF
PCNAENSG00000132646.63099.322304428.41010-0.514802.721201.36660HepG2HLTF
PCNAENSG00000132646.62301.692803089.17990-0.424504.902604.07530HepG2HNRNPA1
PCNAENSG00000132646.65174.638607402.95080-0.516608.217006.76410HepG2HNRNPA2B1
PCNAENSG00000132646.63332.881805677.22680-0.7684029.2149027.27020HepG2HNRNPF
PCNAENSG00000132646.65523.337507338.29150-0.4099013.5034012.12000HepG2HNRNPL
PCNAENSG00000132646.61959.307506193.65370-1.6604033.9955032.18140HepG2HNRNPLL
PCNAENSG00000132646.64673.560303413.473400.4532011.8687010.68680HepG2HNRNPU
PCNAENSG00000132646.63595.559705590.48770-0.636806.459105.39470HepG2IGF2BP1
PCNAENSG00000132646.62527.104403808.88460-0.591906.897205.87740HepG2IGF2BP2
PCNAENSG00000132646.61710.902901263.760500.436902.889401.66630HepG2KHDRBS1
PCNAENSG00000132646.63418.085804389.14330-0.360803.844101.92920HepG2CCAR2
PCNAENSG00000132646.62941.612904116.28390-0.4847016.2836014.07590HepG2KIF1C
PCNAENSG00000132646.65373.515504040.433200.411303.573302.82750HepG2MAGOH
PCNAENSG00000132646.67214.925604063.127300.8283011.9890010.74040HepG2MATR3
PCNAENSG00000132646.62414.953603345.53660-0.470202.424701.43780HepG2METAP2
PCNAENSG00000132646.62778.423103600.98850-0.374104.170103.18680HepG2MSI2
PCNAENSG00000132646.63944.991106317.67260-0.679405.809104.37950HepG2MTPAP
PCNAENSG00000132646.63297.519404158.90200-0.334802.433001.83690HepG2NCBP2
PCNAENSG00000132646.63537.227904393.55320-0.312803.101501.60430HepG2NIP7
PCNAENSG00000132646.63647.490105492.17430-0.590508.841407.56070HepG2NSUN2
PCNAENSG00000132646.6736.231001212.39510-0.719604.342003.21560HepG2PABPC1
PCNAENSG00000132646.61530.389503704.07330-1.2752026.8370024.66640HepG2PABPC4
PCNAENSG00000132646.64493.794403566.981700.333106.402905.53920HepG2PCBP1
PCNAENSG00000132646.62804.846504369.33360-0.639504.904603.55330HepG2PCBP2
PCNAENSG00000132646.62301.086903196.91300-0.4744010.426709.06490HepG2PRPF4
PCNAENSG00000132646.66714.469104592.932000.547803.609802.22840HepG2PRPF6
PCNAENSG00000132646.62217.514404796.24690-1.1130022.3730020.41070HepG2PRPF8
PCNAENSG00000132646.62799.167403629.50030-0.374806.713505.93470HepG2PTBP1
PCNAENSG00000132646.64530.286407624.91310-0.751106.405905.54860HepG2PUF60
PCNAENSG00000132646.65099.692608088.17060-0.6654017.3864015.79860HepG2PUM2
PCNAENSG00000132646.63210.408604586.67090-0.5147016.3462015.07100HepG2PUS1
PCNAENSG00000132646.62581.140303930.91730-0.6069013.6652012.42870HepG2QKI
PCNAENSG00000132646.64044.448805405.92920-0.418606.567205.31530HepG2RBM15
PCNAENSG00000132646.64190.358506834.14550-0.7057023.3218022.11340HepG2RBM22
PCNAENSG00000132646.62497.952003567.53030-0.514207.927906.83790HepG2RBM25
PCNAENSG00000132646.62718.243305299.32240-0.963103.164001.41950HepG2RBM39
PCNAENSG00000132646.62057.164701281.147800.683105.547703.40460HepG2RBM47
PCNAENSG00000132646.66237.678504039.316100.6268018.2232017.07260HepG2NELFE
PCNAENSG00000132646.64964.236403762.018200.400009.215608.18980HepG2RECQL
PCNAENSG00000132646.63193.164106115.16580-0.9374021.2744019.74220HepG2RPLP0
PCNAENSG00000132646.62052.772504142.75510-1.0130010.798809.06370HepG2RPS10
PCNAENSG00000132646.62348.699703110.60630-0.405305.009304.21000HepG2RPS19
PCNAENSG00000132646.61760.441201331.813900.402402.327001.59130HepG2RPS3A
PCNAENSG00000132646.62368.726404744.58120-1.0022016.0650014.45270HepG2RRP9
PCNAENSG00000132646.62289.351303039.81720-0.409009.263408.19370HepG2SAFB2
PCNAENSG00000132646.62223.276303121.81140-0.489705.307804.01550HepG2SERBP1
PCNAENSG00000132646.62956.427006130.24250-1.0521015.2236013.71100HepG2SF3B1
PCNAENSG00000132646.64966.534107310.56500-0.5577022.8952021.26660HepG2SLBP
PCNAENSG00000132646.64290.908003544.887000.275402.996702.33080HepG2SMN1
PCNAENSG00000132646.63154.340704303.66630-0.448202.956101.96430HepG2SMNDC1
PCNAENSG00000132646.62535.571905210.80690-1.039203.891402.27430HepG2SNRNP200
PCNAENSG00000132646.63766.524706821.05980-0.856808.543207.17480HepG2SNRNP70
PCNAENSG00000132646.63818.040607718.85810-1.0156067.1488065.52830HepG2SRFBP1
PCNAENSG00000132646.611459.374703944.268601.53860154.13430152.01250HepG2SRSF1
PCNAENSG00000132646.62988.190305577.54960-0.9004024.4183022.75120HepG2SRSF7
PCNAENSG00000132646.61512.743503208.84930-1.0849053.2394051.42360HepG2SRSF9
PCNAENSG00000132646.65983.272106701.69540-0.163602.300301.82340HepG2SSB
PCNAENSG00000132646.62432.025303939.75400-0.695903.600102.21590HepG2SUB1
PCNAENSG00000132646.61086.311901461.94670-0.428502.603801.32150HepG2SUGP2
PCNAENSG00000132646.62667.682606188.33720-1.2140024.0443022.40700HepG2SUPV3L1
PCNAENSG00000132646.64291.982303545.187300.275703.713903.08040HepG2TAF15
PCNAENSG00000132646.62063.410106038.04820-1.5491034.3570032.34590HepG2TARDBP
PCNAENSG00000132646.62183.939301418.435300.622502.708501.65160HepG2TBRG4
PCNAENSG00000132646.62210.034704148.00590-0.9083013.3042011.45520HepG2TFIP11
PCNAENSG00000132646.62217.824403257.62390-0.554709.370007.84800HepG2TIA1
PCNAENSG00000132646.62261.930803346.49030-0.565106.620105.81420HepG2TRIM56
PCNAENSG00000132646.62390.062306062.85870-1.342905.555904.11430HepG2U2AF2
PCNAENSG00000132646.65146.884207884.14470-0.615307.896106.45110HepG2UBE2L3
PCNAENSG00000132646.62620.319204434.78580-0.7591031.4915029.67080HepG2UPF1
PCNAENSG00000132646.63426.182204558.36890-0.411905.210403.81540HepG2UTP18
PCNAENSG00000132646.65090.914304281.617400.249703.671102.99750HepG2UTP3
PCNAENSG00000132646.64272.924103154.930100.437504.589803.75970HepG2ZC3H8
PCNAENSG00000132646.61341.398004877.42090-1.86240205.40200202.84880HepG2ZNF622
PCNAENSG00000132646.63484.114104552.05180-0.385703.962402.47640K562ABCF1
PCNAENSG00000132646.63790.282706222.60790-0.715209.478508.49660K562AQR
PCNAENSG00000132646.62892.632303719.27050-0.362607.465105.86430K562BCLAF1
PCNAENSG00000132646.61866.759102743.83700-0.555702.696801.83480K562BOP1
PCNAENSG00000132646.62417.981603170.70020-0.391003.214001.65940K562BUD13
PCNAENSG00000132646.62632.663303386.91100-0.363403.584102.11710K562CIRBP
PCNAENSG00000132646.61770.097902917.69520-0.721003.281702.42540K562CPSF6
PCNAENSG00000132646.62272.098102821.62100-0.312503.937402.64520K562CSTF2
PCNAENSG00000132646.62747.948703330.31670-0.277303.500002.13510K562DDX21
PCNAENSG00000132646.62043.573702575.11910-0.333504.799802.42750K562DDX24
PCNAENSG00000132646.61572.854602430.34780-0.6278010.388408.24010K562DDX3X
PCNAENSG00000132646.63028.331304683.29270-0.6290019.2941017.72520K562DDX47
PCNAENSG00000132646.61976.775802464.00930-0.317904.090502.41190K562DDX6
PCNAENSG00000132646.61956.039702865.79100-0.551004.946203.70830K562EFTUD2
PCNAENSG00000132646.62112.608302669.34770-0.337505.370403.65800K562EIF2S1
PCNAENSG00000132646.63862.062504967.89800-0.363306.429705.40060K562EIF2S2
PCNAENSG00000132646.6829.887801500.56620-0.854506.347104.77230K562EIF3A
PCNAENSG00000132646.62116.234203068.91510-0.536203.582902.38950K562EIF3D
PCNAENSG00000132646.62278.348902861.67780-0.328904.381303.38890K562EIF3G
PCNAENSG00000132646.62256.569703272.15440-0.536106.960205.55900K562FIP1L1
PCNAENSG00000132646.61801.979502552.28360-0.502204.856603.29540K562FKBP4
PCNAENSG00000132646.61919.593902968.28060-0.628803.161002.24150K562FMR1
PCNAENSG00000132646.61725.413402515.70970-0.544002.415701.56560K562FTO
PCNAENSG00000132646.62038.706102529.93010-0.311403.416901.90830K562FUS
PCNAENSG00000132646.63706.445502640.490000.4891010.391409.30430K562FXR1
PCNAENSG00000132646.62685.178003531.07330-0.395106.414704.71930K562GLRX3
PCNAENSG00000132646.61725.383202785.84820-0.691203.368202.49430K562GPKOW
PCNAENSG00000132646.65511.210106620.46330-0.264602.591101.85800K562GRSF1
PCNAENSG00000132646.62979.073103914.83440-0.394105.182903.72720K562HNRNPA1
PCNAENSG00000132646.61842.357402940.58560-0.6746012.0283010.85710K562HNRNPC
PCNAENSG00000132646.62085.464202625.75330-0.332403.192101.96070K562HNRNPF
PCNAENSG00000132646.63837.914902691.384700.511905.049303.74800K562HNRNPM
PCNAENSG00000132646.62481.625003213.87310-0.373003.831402.38450K562IGF2BP3
PCNAENSG00000132646.61228.500902378.32820-0.953005.720404.31910K562KRR1
PCNAENSG00000132646.62299.705402847.00280-0.308002.702401.33430K562LARP7
PCNAENSG00000132646.62037.856502621.63010-0.363403.755401.89710K562LSM11
PCNAENSG00000132646.61907.103102719.22810-0.511802.339401.53700K562METAP2
PCNAENSG00000132646.63035.697803712.44700-0.290305.095604.02090K562MTPAP
PCNAENSG00000132646.62021.281302535.48210-0.327003.717502.26980K562NCBP2
PCNAENSG00000132646.62814.409604124.95220-0.5515024.8553022.96450K562NSUN2
PCNAENSG00000132646.62022.997202636.48930-0.382103.971802.86020K562PSIP1
PCNAENSG00000132646.610554.184908123.615600.377504.405603.03220K562PUM1
PCNAENSG00000132646.61806.861902634.19270-0.543907.089406.26580K562PUS1
PCNAENSG00000132646.61759.634502405.19570-0.450905.879104.42780K562RCC2
PCNAENSG00000132646.61586.407302841.01470-0.840607.856206.46820K562RPS19
PCNAENSG00000132646.63229.562304070.14100-0.333705.633504.50020K562SF3A3
PCNAENSG00000132646.61671.840102648.83090-0.663903.530602.42730K562SF3B1
PCNAENSG00000132646.61854.617502280.08800-0.298002.369701.43810K562SRFBP1
PCNAENSG00000132646.64126.155503163.121200.383304.968604.02380K562SRSF1
PCNAENSG00000132646.62217.342502987.13880-0.429904.528103.12710K562SRSF5
PCNAENSG00000132646.62439.816302971.77030-0.284603.606902.25820K562SRSF7
PCNAENSG00000132646.61731.364402700.77040-0.641505.636204.15000K562SUPV3L1
PCNAENSG00000132646.62579.598203201.45120-0.311602.507001.83070K562TARDBP
PCNAENSG00000132646.62556.776303088.11750-0.272402.649101.84940K562TIA1
PCNAENSG00000132646.61660.601602535.89320-0.610804.833903.56720K562TIAL1
PCNAENSG00000132646.61836.871602693.76930-0.552407.546205.80800K562TRIM56
PCNAENSG00000132646.61486.837102274.88250-0.613506.275705.07310K562U2AF2
PCNAENSG00000132646.62158.762102858.09480-0.404802.663201.66610K562UCHL5
PCNAENSG00000132646.62993.470404373.76710-0.5471016.8476015.24330K562UPF1
PCNAENSG00000132646.62397.973103742.50600-0.6422011.9088010.04590K562WDR3
PCNAENSG00000132646.63058.932103891.69200-0.347404.875103.78050K562WDR43
PCNAENSG00000132646.65099.371307010.53630-0.459206.015304.66330K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PCNA is not available on ENCORE database.





5 RBPs can affect the splicing of PCNA :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
MXEPCNAENSG00000132646.6chr20-50981155098310509925550993235096094509621850994145099512-0.129000.000050.004312includedK562LIN28B
MXEPCNAENSG00000132646.6chr20-50981155098310509925550993235096094509621850994145099512-0.103000.000980.056222includedK562LARP7
MXEPCNAENSG00000132646.6chr20-50981155098310509925550993235096094509621850994145099512-0.163000.000000.000202includedK562PHF6
MXEPCNAENSG00000132646.6chr20-509925550993235099414509951250981155098310510022351006720.085000.001220.024121includedK562HNRNPC
MXEPCNAENSG00000132646.6chr20-509925550993235099361509951250981155098310510022351006720.085000.002240.042351includedK562PRPF8
MXEPCNAENSG00000132646.6chr20-509925550993235099414509951250981155098310510022351006720.087000.002160.041421includedK562PRPF8

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PCNA is not avaliable on ENCORE database.