CENPB

General Information

Gene Name       : CENPB
Gene ID             : ENSG00000125817.7
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CENPB)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CENPBENSG00000125817.76.8514.2110.53ENCSR000AEF
HepG2CENPBENSG00000125817.731.0411.3221.18ENCSR985KAT
K562CENPBENSG00000125817.722.2216.7219.47ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CENPB is not avaliable on ENCORE database.



Proteins bound to RNA
  • CENPB RNA is bound by 23 proteins.  







eCLIP assay for CENPB is not avaliable on ENCORE database.





23 proteins are bound to CENPB RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2037649843765024-3'-UTR3.513453.97153HepG2UPF1
chr2037646123764690-3'-UTR4.839945.68967HepG2PCBP2
chr2037645823764679-3'-UTR5.8112613.08346HepG2UPF1
chr2037645073764550-3'-UTR6.430219.28899K562PABPC4
chr2037651513765222-3'-UTR3.913926.83466HepG2UPF1
chr2037650493765130-3'-UTR5.1890216.83940HepG2UPF1
chr2037645853764728-3'-UTR3.175443.96060HepG2AKAP1
chr2037650593765129-3'-UTR3.102254.88776HepG2PRPF4
chr2037649983765071-3'-UTR3.592524.22136HepG2RBM15
chr2037647253764793-3'-UTR3.504144.14074K562UPF1
chr2037671673767245-5'-UTR4.6198525.94974HepG2DDX3X
chr2037671533767241-5'-UTR3.649344.95949HepG2RPS3
chr2037671213767167-5'-UTR,CDS5.7067423.81585HepG2DDX3X
chr2037672543767303-5'-UTR5.1664719.24828HepG2DDX3X
chr2037656363765789-CDS5.710149.75255K562DDX6
chr2037669523767027-CDS3.272783.80299HepG2GRWD1
chr2037654993765602-CDS3.731093.25119K562SRSF7
chr2037664863766524-CDS3.590697.12467HepG2DDX3X
chr2037657223765763-CDS4.939293.27329HepG2RBM15
chr2037656433765762-CDS5.7413213.26907K562UCHL5
chr2037665553766646-CDS3.595203.29600K562LIN28B
chr2037669353766959-CDS3.982716.48775HepG2DDX3X
chr2037656693765797-CDS3.654165.82800K562GTF2F1
chr2037656803765810-CDS5.105637.86574HepG2GTF2F1
chr2037656723765779-CDS3.775855.88155HepG2FXR2
chr2037664753766534-CDS3.196115.54154HepG2LIN28B
chr2037656623765750-CDS5.0662216.12720HepG2PRPF4
chr2037657253765777-CDS3.346456.61223HepG2UPF1
chr2037654223765478-CDS4.399145.11007HepG2GRWD1
chr2037656593765786-CDS5.6391910.41090K562UPF1
chr2037656683765766-CDS4.978376.99374K562ZNF622
chr2037657683765845-CDS4.424099.05995HepG2PRPF4
chr2037665663766630-CDS3.674168.19229HepG2LIN28B
chr2037655353765610-CDS4.470044.41713HepG2SRSF1
chr2037656533765760-CDS3.509556.03449HepG2SRSF9
chr2037656693765803-CDS3.834429.56778HepG2G3BP1
chr2037656693765766-CDS3.098623.46298HepG2SRSF1
chr2037653543765422-CDS3.264106.59473HepG2GRWD1
chr2037656833765725-CDS4.035556.75470HepG2UPF1
chr2037654783765602-CDS3.230323.68893HepG2GRWD1
chr2037656633765787-CDS4.456014.28240HepG2TRA2A
chr2037656653765765-CDS4.215077.49468HepG2BCLAF1
chr2037656813765779-CDS4.068363.28461K562BUD13
chr2037656873765777-CDS4.370934.39097HepG2HNRNPUL1
chr2037654883765536-CDS3.928103.01428K562UCHL5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CENPB is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CENPB is not available on ENCORE database.

  • 130 RBPs can affect the levels of CENPB.  








The Knockdown/knockout RNA-Seq assay for CENPB is not available on ENCORE database.





130 RBPs can affect the gene expression of CENPB :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CENPBENSG00000125817.71556.109601024.141100.603405.750804.44670HepG2ABCF1
CENPBENSG00000125817.71151.46010836.197900.461406.976306.09910HepG2ACO1
CENPBENSG00000125817.71944.320601150.999400.756307.905607.05670HepG2AKAP1
CENPBENSG00000125817.71099.14870840.068100.387704.469403.51130HepG2AKAP8L
CENPBENSG00000125817.71272.202201481.26390-0.219501.974101.37730HepG2AUH
CENPBENSG00000125817.71066.67430598.917100.832606.684105.19160HepG2BCCIP
CENPBENSG00000125817.7138.70910979.54840-2.8201076.6097074.44690HepG2BOP1
CENPBENSG00000125817.71082.27010835.945900.372504.941204.09980HepG2CKAP4
CENPBENSG00000125817.7482.01740241.860200.994806.245205.09640HepG2CNOT7
CENPBENSG00000125817.7615.86870899.28020-0.546104.643803.77340HepG2CPSF6
CENPBENSG00000125817.7344.74980574.19130-0.736004.772302.83340HepG2CSTF2T
CENPBENSG00000125817.7866.21260627.831100.464205.726404.86500HepG2CELF1
CENPBENSG00000125817.71084.36160773.331000.487608.046106.75210HepG2DDX19B
CENPBENSG00000125817.7449.46460319.255300.493403.436002.14160HepG2DDX1
CENPBENSG00000125817.7301.13130605.16130-1.0069012.4636010.57990HepG2DDX24
CENPBENSG00000125817.7851.37140550.887400.627903.329301.92740HepG2DDX27
CENPBENSG00000125817.71622.388901102.481400.557304.936904.12080HepG2DDX3X
CENPBENSG00000125817.7908.52600588.915100.625403.701402.82080HepG2DDX55
CENPBENSG00000125817.71072.71330799.996600.423105.064604.19830HepG2DKC1
CENPBENSG00000125817.7487.98440313.052500.640302.953802.23140HepG2DNAJC21
CENPBENSG00000125817.7520.03100310.266800.745009.789808.65220HepG2DNAJC2
CENPBENSG00000125817.71010.05820776.835400.378703.084301.84550HepG2EIF2S2
CENPBENSG00000125817.71641.718801006.020300.706406.886405.87580HepG2EIF4A3
CENPBENSG00000125817.71219.38020817.052400.577506.936705.61910HepG2EWSR1
CENPBENSG00000125817.71450.851001015.336600.514804.492503.62560HepG2FXR1
CENPBENSG00000125817.71295.89150999.958700.373902.629601.76290HepG2G3BP2
CENPBENSG00000125817.7620.41370369.265600.748506.509705.13770HepG2GEMIN5
CENPBENSG00000125817.7730.818401019.40800-0.480103.318702.62250HepG2GPKOW
CENPBENSG00000125817.7337.20070223.851700.591002.575401.50340HepG2GRSF1
CENPBENSG00000125817.71020.99660798.287000.354902.226201.34330HepG2HDGF
CENPBENSG00000125817.7679.73030316.051401.104709.066207.99510HepG2HNRNPA1
CENPBENSG00000125817.7311.25810199.526000.641403.164001.66400HepG2HNRNPAB
CENPBENSG00000125817.7535.66610351.541600.607503.330902.57580HepG2HNRNPC
CENPBENSG00000125817.7341.26320209.483400.703903.795302.00200HepG2HNRNPD
CENPBENSG00000125817.7664.11060953.94390-0.522504.423803.55670HepG2HNRNPK
CENPBENSG00000125817.7717.73250614.739400.223401.950501.37230HepG2HNRNPL
CENPBENSG00000125817.7891.28010713.448600.321002.262401.40190HepG2HNRNPM
CENPBENSG00000125817.7717.07250349.218001.0379019.5718018.07170HepG2HNRNPU
CENPBENSG00000125817.71523.46360957.174200.670407.408806.35980HepG2IGF2BP2
CENPBENSG00000125817.7593.61290356.715800.7346010.354009.02760HepG2ILF2
CENPBENSG00000125817.7386.48570235.748500.713103.528302.00930HepG2ILF3
CENPBENSG00000125817.7468.62250230.241801.025204.984603.32130HepG2KHDRBS1
CENPBENSG00000125817.71303.64160962.860200.437002.569301.60830HepG2KHSRP
CENPBENSG00000125817.7939.50140764.346000.297603.172302.08180HepG2KIF1C
CENPBENSG00000125817.72017.44620872.266101.2096017.1434015.10620HepG2LARP4
CENPBENSG00000125817.7768.24090500.451100.618203.887502.53420HepG2LARP7
CENPBENSG00000125817.7758.50640525.193000.530202.567801.40180HepG2LIN28B
CENPBENSG00000125817.71763.718601015.692400.796109.960608.73920HepG2MAGOH
CENPBENSG00000125817.7639.00310423.530500.593303.588501.76030HepG2MARK2
CENPBENSG00000125817.72085.946301021.327601.0302014.6760013.30570HepG2MATR3
CENPBENSG00000125817.71134.14170836.870300.438403.984303.01800HepG2MSI2
CENPBENSG00000125817.7704.50590452.463900.638703.185701.66720HepG2NIP7
CENPBENSG00000125817.71020.42420669.246100.608508.824107.48710HepG2NOL12
CENPBENSG00000125817.7842.74580541.055500.639202.443701.42220HepG2NONO
CENPBENSG00000125817.7747.52910564.123200.406002.969301.30670HepG2NUP35
CENPBENSG00000125817.7828.58310508.520200.704204.577501.98260HepG2NUSAP1
CENPBENSG00000125817.7576.29870309.977100.894605.597603.39270HepG2PA2G4
CENPBENSG00000125817.71237.37490930.763400.410702.887702.15020HepG2PABPC4
CENPBENSG00000125817.7567.10710345.674800.714108.379307.03410HepG2PARN
CENPBENSG00000125817.7596.85090342.999800.799108.966106.88600HepG2PKM
CENPBENSG00000125817.7461.72170311.475700.567804.855003.90720HepG2PPIL4
CENPBENSG00000125817.7648.34640816.04500-0.331903.022002.21850HepG2PRPF4
CENPBENSG00000125817.71570.606101103.172500.509608.273707.43290HepG2PTBP1
CENPBENSG00000125817.7972.04410638.899600.605307.066406.17020HepG2PUF60
CENPBENSG00000125817.71260.93770678.273600.8945027.3249025.84980HepG2PUM1
CENPBENSG00000125817.71429.44280851.711500.7469018.4094017.07350HepG2PUS1
CENPBENSG00000125817.7623.192301005.99880-0.690909.564808.10310HepG2RBM15
CENPBENSG00000125817.71103.96050603.497200.871208.198106.48600HepG2RBM27
CENPBENSG00000125817.7847.28290490.069600.789804.996203.56260HepG2RCC2
CENPBENSG00000125817.71585.124101227.710100.368504.849304.16840HepG2NELFE
CENPBENSG00000125817.7792.53670403.629900.9733013.2442012.02780HepG2RPS19
CENPBENSG00000125817.7976.98570556.524400.811806.753205.53830HepG2RPS2
CENPBENSG00000125817.7601.65890242.656001.3099012.9262011.25370HepG2RPS3A
CENPBENSG00000125817.7857.88530568.155200.594403.379202.18990HepG2RPS5
CENPBENSG00000125817.7374.72680230.632900.700103.299301.60090HepG2SBDS
CENPBENSG00000125817.7573.12090405.013400.500803.040602.05330HepG2SERBP1
CENPBENSG00000125817.71369.23410982.685900.478502.822502.14140HepG2SF3A3
CENPBENSG00000125817.7720.62220362.683500.9904019.7298018.25170HepG2SMN1
CENPBENSG00000125817.7616.354301605.48950-1.3812055.1395053.64390HepG2SRFBP1
CENPBENSG00000125817.7804.969601198.81170-0.574609.195208.44530HepG2SRSF1
CENPBENSG00000125817.7599.368901036.10010-0.789606.850905.22110HepG2SRSF3
CENPBENSG00000125817.71018.38840630.884300.6907012.8804011.66220HepG2SRSF5
CENPBENSG00000125817.71769.105501393.943000.343705.061004.40810HepG2SSB
CENPBENSG00000125817.7309.13570211.012800.550802.548701.49830HepG2STIP1
CENPBENSG00000125817.71155.38850717.434500.6874011.7725010.64010HepG2SUCLG1
CENPBENSG00000125817.7446.482601077.57540-1.2711030.7449029.14660HepG2TAF15
CENPBENSG00000125817.7547.11980339.357100.689006.666705.95190HepG2TIAL1
CENPBENSG00000125817.7540.56090342.362100.658807.545206.69090HepG2TRIM56
CENPBENSG00000125817.7798.82420624.265100.355602.873401.98120HepG2TUFM
CENPBENSG00000125817.71122.51440660.832200.764303.177402.28070HepG2UBE2L3
CENPBENSG00000125817.7441.57770217.336001.022607.592005.77830HepG2XPO5
CENPBENSG00000125817.7966.61470577.022600.744205.980504.92610HepG2XRN2
CENPBENSG00000125817.71265.95640958.474800.401305.657604.94740HepG2ZNF622
CENPBENSG00000125817.7261.17050450.35390-0.786103.705903.06670K562AGGF1
CENPBENSG00000125817.7249.23450468.59230-0.910805.021504.12970K562AKAP8L
CENPBENSG00000125817.71350.07580995.221500.439904.295002.69430K562APOBEC3C
CENPBENSG00000125817.7148.78060564.53210-1.9239029.0665026.42510K562BOP1
CENPBENSG00000125817.7417.01610598.97490-0.522404.441802.51860K562CEBPZ
CENPBENSG00000125817.7383.63670600.26380-0.645906.188005.01630K562CPSF6
CENPBENSG00000125817.7869.730501386.39620-0.672707.475605.89720K562CELF1
CENPBENSG00000125817.7549.29700688.45260-0.325802.520901.36740K562DDX21
CENPBENSG00000125817.71011.28740828.224100.288002.504201.81410K562EIF2S2
CENPBENSG00000125817.7440.20020270.223800.703905.273804.19120K562EIF3G
CENPBENSG00000125817.7315.67200190.767900.726504.264601.83140K562EIF3H
CENPBENSG00000125817.7504.29870368.587000.452202.864602.02930K562EIF4A3
CENPBENSG00000125817.7179.64970289.09490-0.686403.320401.55170K562FASTKD2
CENPBENSG00000125817.7201.07960319.17000-0.666603.650202.32790K562FKBP4
CENPBENSG00000125817.7450.19920610.74590-0.440002.804501.94510K562FMR1
CENPBENSG00000125817.7324.88520517.65870-0.672104.897503.64580K562FTO
CENPBENSG00000125817.7146.34680238.88120-0.706904.388302.65320K562FUS
CENPBENSG00000125817.7968.03430383.312201.3364032.0509030.12590K562FXR1
CENPBENSG00000125817.742.20660128.79000-1.609507.420006.14710K562G3BP2
CENPBENSG00000125817.7363.14330573.10760-0.658305.301304.20920K562GPKOW
CENPBENSG00000125817.7249.70110497.36830-0.994104.782703.64500K562KIF1C
CENPBENSG00000125817.7301.75070489.35350-0.697504.119902.96050K562KRR1
CENPBENSG00000125817.7693.38610324.692801.0945016.2445014.07070K562MAGOH
CENPBENSG00000125817.7574.90070323.996700.827207.241105.65580K562MATR3
CENPBENSG00000125817.7422.81310559.41560-0.403902.417901.60230K562METAP2
CENPBENSG00000125817.7910.586401202.20260-0.400802.775901.64510K562MSI2
CENPBENSG00000125817.7183.81790390.52760-1.087103.744202.67820K562NAA15
CENPBENSG00000125817.7541.76660866.09720-0.6769012.1195010.70970K562NSUN2
CENPBENSG00000125817.7393.70810288.851300.446702.389301.48360K562PCBP2
CENPBENSG00000125817.7641.44100419.976100.610902.533701.81570K562PRPF8
CENPBENSG00000125817.7866.11820315.477701.4569031.4254029.25530K562PTBP1
CENPBENSG00000125817.7161.33400464.86750-1.526809.115108.17810K562PUS1
CENPBENSG00000125817.758.61370122.88100-1.068003.019601.53100K562RAVER1
CENPBENSG00000125817.7202.04150452.81700-1.164306.427405.54960K562RBM15
CENPBENSG00000125817.7533.35720302.371300.818705.204304.00860K562RBM22
CENPBENSG00000125817.7456.38540294.857000.630104.330002.46080K562RBM34
CENPBENSG00000125817.7467.63410318.228800.555203.678002.39680K562NELFE
CENPBENSG00000125817.7312.09740153.085901.027604.760503.40040K562RPS3
CENPBENSG00000125817.7896.14120568.197800.657207.264405.52930K562SAFB
CENPBENSG00000125817.7405.83440545.03330-0.425502.192801.33730K562SF3B1
CENPBENSG00000125817.7214.14540133.918300.677103.673402.68380K562SF3B4
CENPBENSG00000125817.7162.24260248.14450-0.613003.303401.54450K562SND1
CENPBENSG00000125817.7455.89310285.064400.677304.906303.42220K562SRFBP1
CENPBENSG00000125817.7702.06670875.47670-0.318503.246902.24080K562SRPK2
CENPBENSG00000125817.7236.79160147.764400.680203.035201.91980K562SRSF4
CENPBENSG00000125817.7427.61710614.38670-0.522805.227803.60050K562SRSF7
CENPBENSG00000125817.7180.80900278.72850-0.624404.010702.43120K562SSB
CENPBENSG00000125817.7668.85560959.45730-0.520504.400302.64880K562SSRP1
CENPBENSG00000125817.7592.53890877.52410-0.566504.564102.88330K562STAU1
CENPBENSG00000125817.71063.22540639.582700.7331010.818509.19830K562SYNCRIP
CENPBENSG00000125817.7586.45550312.973300.905909.409307.99110K562TARDBP
CENPBENSG00000125817.7509.69880301.913700.755407.288505.85900K562TIA1
CENPBENSG00000125817.775.01350128.93130-0.781403.023102.18400K562U2AF2
CENPBENSG00000125817.7728.88430918.33660-0.333302.067701.44020K562UPF1
CENPBENSG00000125817.7509.72780785.79920-0.624402.819001.93400K562WDR3
CENPBENSG00000125817.7778.852001180.16670-0.599602.675501.82960K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CENPB is not available on ENCORE database.






No RBPs affect the alternative splcing events of CENPB on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CENPB is not avaliable on ENCORE database.