MICALL2

General Information

Gene Name : MICALL2
Gene ID : ENSG00000164877.18
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: MICALL2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MICALL2	ENSG00000164877.18	0.00	0.03	0.01	ENCSR000AEF
HepG2	MICALL2	ENSG00000164877.18	10.83	1.75	6.29	ENCSR985KAT
K562	MICALL2	ENSG00000164877.18	21.53	8.88	15.21	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MICALL2 is not avaliable on ENCORE database.

Proteins bound to RNA

MICALL2 RNA is bound by 67 proteins.

CanvasJS.com

eCLIP assay for MICALL2 is not avaliable on ENCORE database.

67 proteins are bound to MICALL2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	1489872	1489876	-	intron-Distal,intron-Proximal	7.21891	400.00000	K562	AQR
chr7	1489835	1489872	-	intron-Distal,intron-Proximal	7.27854	400.00000	K562	AQR
chr7	1480320	1480382	-	intron-Distal,intron-Proximal	5.67066	400.00000	K562	SF3B4
chr7	1489831	1489835	-	intron-Distal,intron-Proximal	8.00583	216.57838	K562	AQR
chr7	1478878	1478944	-	intron-Distal,intron-Proximal	7.40694	90.71410	K562	TARDBP
chr7	1474292	1474319	-	3'-UTR,CDS,intron-Distal	7.25005	83.47203	K562	AQR
chr7	1479075	1479205	-	intron-Distal,intron-Proximal	6.44043	82.99658	K562	TARDBP
chr7	1478957	1478994	-	intron-Distal	6.59742	75.22038	K562	TARDBP
chr7	1478763	1478851	-	intron-Distal,intron-Proximal	5.83727	75.19141	K562	EIF4G2
chr7	1474319	1474328	-	intron-Distal	6.67111	73.75059	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 621 entries

eCLIP assay for MICALL2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MICALL2 is not available on ENCORE database.
104 RBPs can affect the levels of MICALL2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for MICALL2 is not available on ENCORE database.

104 RBPs can affect the gene expression of MICALL2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MICALL2	ENSG00000164877.14	658.24720	172.87610	1.92880	49.93020	47.92870	HepG2	TRIM56
MICALL2	ENSG00000164877.14	540.98390	157.04180	1.78430	38.04990	36.08990	HepG2	SAFB2
MICALL2	ENSG00000164877.14	775.74350	292.19900	1.40850	32.81760	31.00470	HepG2	SRSF5
MICALL2	ENSG00000164877.14	1787.32590	762.85250	1.22820	31.94300	28.93370	K562	TIA1
MICALL2	ENSG00000164877.14	420.02320	156.66240	1.42270	23.46150	21.73180	HepG2	DNAJC2
MICALL2	ENSG00000164877.14	102.37240	423.71210	-2.04930	23.34630	20.66030	K562	G3BP2
MICALL2	ENSG00000164877.14	197.55060	496.60710	-1.32990	20.16000	18.76570	HepG2	UTP3
MICALL2	ENSG00000164877.14	150.34860	424.01860	-1.49580	20.54500	18.32110	K562	U2AF2
MICALL2	ENSG00000164877.14	1107.35240	282.99770	1.96820	19.40620	17.96560	HepG2	DDX6
MICALL2	ENSG00000164877.14	1601.43330	823.53130	0.95940	18.02530	15.18860	K562	SRSF4
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 123 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MICALL2 is not available on ENCORE database.

28 RBPs can affect the splicing of MICALL2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
A3SS	MICALL2	ENSG00000164877.14	chr7	-	1489875	1490036	1489875	1489924	1498819	1499138	0.66100	0.00011	longer	K562	U2AF2
A3SS	MICALL2	ENSG00000164877.14	chr7	-	1489875	1490036	1489875	1489924	1498819	1499001	0.25600	0.00013	longer	K562	PUS1
A3SS	MICALL2	ENSG00000164877.14	chr7	-	1489875	1490036	1489875	1489924	1498819	1499001	0.31500	0.00000	longer	K562	HNRNPL
RI	MICALL2	ENSG00000164877.14	chr7	-	1480226	1482120	1480226	1480320	1481827	1482120	-0.16900	0.00020	excluded	K562	EIF4G2
RI	MICALL2	ENSG00000164877.14	chr7	-	1480226	1482120	1480226	1480320	1481827	1482120	-0.33000	0.00001	excluded	K562	PRPF8
RI	MICALL2	ENSG00000164877.14	chr7	-	1480226	1482120	1480226	1480320	1481827	1482120	-0.33100	0.00054	excluded	K562	EIF3G
RI	MICALL2	ENSG00000164877.14	chr7	-	1480226	1482120	1480226	1480320	1481827	1482120	-0.19400	0.00168	excluded	K562	HNRNPL
RI	MICALL2	ENSG00000164877.14	chr7	-	1477732	1477989	1477732	1477856	1477924	1477989	0.36600	0.00000	included	K562	EFTUD2
RI	MICALL2	ENSG00000164877.14	chr7	-	1480226	1482120	1480226	1480320	1481827	1482120	-0.17600	0.00268	excluded	K562	PUM1
RI	MICALL2	ENSG00000164877.14	chr7	-	1480226	1482120	1480226	1480320	1481827	1482120	-0.32000	0.00000	excluded	K562	FXR1

Showing 1 to 10 of 37 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MICALL2

General Information

Functions

Localization

Domains (AlphaFold: MICALL2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MICALL2 is not avaliable on ENCORE database.

67 proteins are bound to MICALL2 RNA:

eCLIP assay for MICALL2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MICALL2 is not available on ENCORE database.

104 RBPs can affect the gene expression of MICALL2 :

The Knockdown/knockout RNA-Seq assay for MICALL2 is not available on ENCORE database.

28 RBPs can affect the splicing of MICALL2 :

The Knockdown/knockout RNA-Seq assay for MICALL2 is not avaliable on ENCORE database.