HAMP

General Information

Gene Name       : HAMP
Gene ID             : ENSG00000105697.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HAMP)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HAMPENSG00000105697.80.090.070.08ENCSR000AEF
HepG2HAMPENSG00000105697.886.0436.2061.12ENCSR985KAT
K562HAMPENSG00000105697.80.770.430.60ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HAMP is not avaliable on ENCORE database.



Proteins bound to RNA
  • HAMP RNA is bound by 3 proteins.  







eCLIP assay for HAMP is not avaliable on ENCORE database.





3 proteins are bound to HAMP RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr193577589635776027+3'-UTR,CDS,polyA_signal5.337894.57427HepG2PCBP2
chr193577584035776020+3'-UTR,CDS,intron-Proximal,polyA_signal3.441756.95324HepG2LARP4
chr193577588335775940+CDS4.161206.76541HepG2SND1
chr193577584335775883+CDS3.113153.03966HepG2SND1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HAMP is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HAMP is not available on ENCORE database.

  • 152 RBPs can affect the levels of HAMP.  








The Knockdown/knockout RNA-Seq assay for HAMP is not available on ENCORE database.





152 RBPs can affect the gene expression of HAMP :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HAMPENSG00000105697.372.02790238.27900-1.726001.897301.44720HepG2AKAP1
HAMPENSG00000105697.340.40850100.57740-1.315604.780603.42530HepG2AKAP8
HAMPENSG00000105697.3311.14800624.92440-1.006104.988804.11140HepG2AUH
HAMPENSG00000105697.3147.63230433.32050-1.5534015.9362013.52500HepG2BCCIP
HAMPENSG00000105697.328.03680376.48300-3.7472055.6024052.51200HepG2BCLAF1
HAMPENSG00000105697.34.84270246.46940-5.6694054.0720052.10800HepG2BOP1
HAMPENSG00000105697.34.98420262.31240-5.7178057.6719055.06230HepG2CALR
HAMPENSG00000105697.395.35960277.12490-1.5391011.044909.12650HepG2CCAR1
HAMPENSG00000105697.368.51570282.44610-2.043506.883305.91940HepG2CKAP4
HAMPENSG00000105697.365.61770153.62140-1.227203.642802.75960HepG2CNOT7
HAMPENSG00000105697.354.64910226.27910-2.0498015.8329014.35420HepG2CPSF6
HAMPENSG00000105697.399.00440273.37350-1.4653013.7534011.61660HepG2YBX3
HAMPENSG00000105697.397.35030461.55320-2.2452031.9136030.22300HepG2CELF1
HAMPENSG00000105697.328.43860273.74530-3.2669040.6869037.50750HepG2DDX1
HAMPENSG00000105697.343.09620264.09920-2.6154013.3061011.95600HepG2DDX21
HAMPENSG00000105697.326.18600258.83630-3.3052015.1951013.18220HepG2DDX24
HAMPENSG00000105697.3215.99510398.60290-0.884005.513403.76150HepG2DDX27
HAMPENSG00000105697.388.66710322.68910-1.8637018.9440016.11950HepG2DDX28
HAMPENSG00000105697.312.77450228.15770-4.158704.882204.06970HepG2DDX3X
HAMPENSG00000105697.345.29870152.25280-1.7489010.333308.04320HepG2DDX47
HAMPENSG00000105697.3147.59780263.42820-0.835705.318503.51320HepG2DDX52
HAMPENSG00000105697.3206.84180426.06420-1.042508.322507.06140HepG2DDX55
HAMPENSG00000105697.3120.93340256.95430-1.087304.563103.31930HepG2DDX59
HAMPENSG00000105697.3828.66790196.217202.078205.621104.76790HepG2DDX6
HAMPENSG00000105697.319.26900258.89430-3.7480043.1338040.25300HepG2DHX30
HAMPENSG00000105697.3446.86740270.376600.724804.292303.48460HepG2DKC1
HAMPENSG00000105697.3120.95010268.41870-1.150109.842808.58040HepG2DNAJC21
HAMPENSG00000105697.342.91800266.06830-2.6321036.1084034.00590HepG2DNAJC2
HAMPENSG00000105697.3196.52850314.32480-0.677503.440402.41870HepG2EEF2
HAMPENSG00000105697.371.95530262.05810-1.8647017.3989014.78560HepG2EFTUD2
HAMPENSG00000105697.359.52800243.52990-2.032508.753106.86080HepG2AGO1
HAMPENSG00000105697.38.66470188.40500-4.442505.136304.34290HepG2EIF2S1
HAMPENSG00000105697.374.95160255.17460-1.7675015.5137013.58190HepG2EIF3D
HAMPENSG00000105697.389.18240489.59860-2.4568034.9938032.76170HepG2EIF4G1
HAMPENSG00000105697.3689.18750468.985600.555302.021801.31840HepG2EIF4G2
HAMPENSG00000105697.3275.45090717.39670-1.381007.102606.21440HepG2ETF1
HAMPENSG00000105697.370.40340236.49900-1.748107.508904.83750HepG2EXOSC9
HAMPENSG00000105697.380.88990228.03720-1.4952012.8041010.32380HepG2FAM120A
HAMPENSG00000105697.327.90160134.16830-2.265609.018305.73930HepG2FASTKD1
HAMPENSG00000105697.3129.13590354.61040-1.4573013.7820011.38170HepG2FKBP4
HAMPENSG00000105697.372.88880226.65290-1.636706.400104.86000HepG2FTO
HAMPENSG00000105697.3109.23290266.47190-1.286608.321706.49750HepG2FUS
HAMPENSG00000105697.3610.98940256.924901.2497013.4438011.22680HepG2GNB2L1
HAMPENSG00000105697.391.91810256.52350-1.4807010.169308.99670HepG2GPKOW
HAMPENSG00000105697.396.86240251.21300-1.374908.512305.98100HepG2GTF2F1
HAMPENSG00000105697.3136.21100269.76040-0.985802.848601.85740HepG2HDGF
HAMPENSG00000105697.350.09940255.62400-2.3512017.1296013.84050HepG2HLTF
HAMPENSG00000105697.352.14290270.99040-2.3777023.2547021.70210HepG2HNRNPA1
HAMPENSG00000105697.3161.30460456.04590-1.4994019.1976017.18040HepG2HNRNPA2B1
HAMPENSG00000105697.351.88280126.99730-1.291504.305902.55220HepG2HNRNPAB
HAMPENSG00000105697.3121.87090301.43330-1.3065010.392509.12380HepG2HNRNPC
HAMPENSG00000105697.335.39690133.07790-1.910607.283604.89600HepG2HNRNPD
HAMPENSG00000105697.3201.91630519.26600-1.3627016.9046015.32720HepG2HNRNPF
HAMPENSG00000105697.3659.31630451.930200.544807.138006.10040HepG2HNRNPL
HAMPENSG00000105697.322.76390244.80340-3.4268032.2876030.51670HepG2HNRNPLL
HAMPENSG00000105697.366.54180299.43990-2.1699030.0547028.24070HepG2HNRNPU
HAMPENSG00000105697.3293.72410511.33240-0.799803.011202.25810HepG2IGF2BP1
HAMPENSG00000105697.321.60590186.11330-3.106703.467502.36610HepG2IGF2BP3
HAMPENSG00000105697.3134.71080305.86690-1.1830013.2112011.74120HepG2ILF2
HAMPENSG00000105697.337.78130149.79350-1.987207.686805.42060HepG2ILF3
HAMPENSG00000105697.3340.02210146.547601.214208.132705.98710HepG2KHDRBS1
HAMPENSG00000105697.3365.58320199.324800.875002.230101.34240HepG2KHSRP
HAMPENSG00000105697.322.06280109.39560-2.3099010.164707.87930HepG2KRR1
HAMPENSG00000105697.348.30990264.25770-2.4516014.7890012.19570HepG2LIN28B
HAMPENSG00000105697.3102.60120252.50320-1.299305.789803.41590HepG2LSM11
HAMPENSG00000105697.397.22890267.07240-1.457807.608605.95480HepG2METAP2
HAMPENSG00000105697.313.18950177.46240-3.750103.885002.92990HepG2MSI2
HAMPENSG00000105697.315.45770249.62730-4.0134031.2324028.24580HepG2MTPAP
HAMPENSG00000105697.313.00880216.43040-4.056304.713403.89950HepG2NCBP2
HAMPENSG00000105697.381.69100227.66540-1.478706.009903.91710HepG2NIP7
HAMPENSG00000105697.324.08740103.74000-2.106609.208706.69860HepG2NKRF
HAMPENSG00000105697.399.39890492.00070-2.3074033.0932030.72130HepG2NOL12
HAMPENSG00000105697.3255.55210391.33920-0.614802.403901.39070HepG2NONO
HAMPENSG00000105697.338.22810217.05160-2.5053018.3128016.59250HepG2NSUN2
HAMPENSG00000105697.319.01120140.46260-2.8853011.719609.86040HepG2PABPC1
HAMPENSG00000105697.314.83490192.54690-3.698104.341803.45030HepG2PABPC4
HAMPENSG00000105697.3131.86350296.38600-1.1684011.309109.78930HepG2PARN
HAMPENSG00000105697.372.42880195.61490-1.433401.989201.46110HepG2PCBP1
HAMPENSG00000105697.3100.25080268.71770-1.422504.211002.08990HepG2PES1
HAMPENSG00000105697.386.48410241.43340-1.481108.092705.40070HepG2PHF6
HAMPENSG00000105697.3106.68470211.02070-0.984006.054804.27330HepG2PKM
HAMPENSG00000105697.330.37500137.80130-2.181607.998405.53140HepG2PNPT1
HAMPENSG00000105697.346.92110267.07540-2.5089031.3556029.11420HepG2PPIL4
HAMPENSG00000105697.3197.45140350.50010-0.827903.689002.80770HepG2PRPF4
HAMPENSG00000105697.3222.05130328.56630-0.565302.942902.11140HepG2PRPF8
HAMPENSG00000105697.3743.82210469.690900.663104.353703.62570HepG2PUF60
HAMPENSG00000105697.3349.71500498.63660-0.511803.301102.66530HepG2PUM1
HAMPENSG00000105697.3228.25270498.24820-1.1262010.961809.67540HepG2PUM2
HAMPENSG00000105697.330.61420287.86900-3.2331011.1097010.01650HepG2PUS1
HAMPENSG00000105697.318.29220215.51220-3.558505.841704.98160HepG2QKI
HAMPENSG00000105697.3158.50800243.36050-0.618501.945501.34420HepG2RAVER1
HAMPENSG00000105697.3156.9289067.978101.206904.475802.22300HepG2RBM14
HAMPENSG00000105697.3119.93220262.28740-1.128902.627601.78970HepG2RBM15
HAMPENSG00000105697.319.11370599.63180-4.9714033.9256032.50300HepG2RBM22
HAMPENSG00000105697.360.50660195.63650-1.693002.258201.64410HepG2RBM25
HAMPENSG00000105697.346.58810148.42660-1.671705.305503.22080HepG2RBM47
HAMPENSG00000105697.3132.49000246.58820-0.896203.671002.44750HepG2RCC2
HAMPENSG00000105697.3721.90400221.534401.7042023.3217022.05550HepG2NELFE
HAMPENSG00000105697.3462.08740206.413901.162504.406603.65180HepG2RECQL
HAMPENSG00000105697.35.32970239.15220-5.4877046.8529043.48460HepG2RPS10
HAMPENSG00000105697.381.52540280.02560-1.780209.715008.29480HepG2RPS2
HAMPENSG00000105697.318.64000154.42060-3.0504011.8007010.19310HepG2RPS3A
HAMPENSG00000105697.362.55740325.00950-2.3772025.0101023.12300HepG2RRP9
HAMPENSG00000105697.367.42190266.66060-1.9837023.2818021.65720HepG2SAFB2
HAMPENSG00000105697.317.65240145.40940-3.0422011.759809.25790HepG2SART3
HAMPENSG00000105697.343.22530146.60110-1.761906.494904.23690HepG2SBDS
HAMPENSG00000105697.363.22000249.21060-1.9789017.8732015.63640HepG2SERBP1
HAMPENSG00000105697.3229.1748082.249201.478309.591608.27890HepG2SF3A3
HAMPENSG00000105697.358.11960242.31770-2.0598017.0803015.49000HepG2SF3B1
HAMPENSG00000105697.3118.89850450.44030-1.9216023.6822022.03310HepG2SLBP
HAMPENSG00000105697.3142.38020248.42360-0.803103.987502.82010HepG2SMNDC1
HAMPENSG00000105697.389.73370237.09740-1.401809.291806.39250HepG2SND1
HAMPENSG00000105697.3150.92800269.61710-0.837103.495302.61220HepG2SNRNP70
HAMPENSG00000105697.3454.32690677.29900-0.576102.165701.70530HepG2SRFBP1
HAMPENSG00000105697.31114.85230216.302402.3656062.7208061.13900HepG2SRSF1
HAMPENSG00000105697.3249.17850463.79800-0.896308.243507.23760HepG2SRSF5
HAMPENSG00000105697.3260.18360510.14900-0.971404.840903.96000HepG2SRSF7
HAMPENSG00000105697.31059.23090176.009002.5892087.5169085.33190HepG2SRSF9
HAMPENSG00000105697.3194.18280109.118700.831403.725302.25470HepG2SSRP1
HAMPENSG00000105697.341.15050134.38420-1.707404.828203.33690HepG2STIP1
HAMPENSG00000105697.357.96900227.44080-1.9721011.817809.49470HepG2SUB1
HAMPENSG00000105697.3242.89540527.42620-1.1186014.8710013.61520HepG2SUCLG1
HAMPENSG00000105697.318.07670110.41920-2.6108011.635308.95740HepG2SUGP2
HAMPENSG00000105697.325.94690148.05400-2.512502.512901.61410HepG2SUPT6H
HAMPENSG00000105697.317.23840238.55860-3.7906036.7124034.64650HepG2TARDBP
HAMPENSG00000105697.3108.16450284.24640-1.3939010.036708.37350HepG2TFIP11
HAMPENSG00000105697.375.31570290.93710-1.9497022.4501021.28100HepG2TIAL1
HAMPENSG00000105697.333.24710293.56440-3.1424047.6413045.67690HepG2TRIM56
HAMPENSG00000105697.395.07570202.77430-1.092705.967803.76130HepG2TROVE2
HAMPENSG00000105697.341.09820485.81380-3.5633047.4270044.34960HepG2UBE2L3
HAMPENSG00000105697.3409.93070250.512900.710402.707501.95650HepG2UCHL5
HAMPENSG00000105697.331.7124072.94170-1.201703.537602.76360HepG2UPF1
HAMPENSG00000105697.329.1018074.97940-1.365404.276003.00690HepG2UTP18
HAMPENSG00000105697.312.5959070.42350-2.483108.293607.34660HepG2UTP3
HAMPENSG00000105697.314.48240138.32390-3.2557012.3596010.11170HepG2XPO5
HAMPENSG00000105697.392.36870267.68440-1.5351011.206309.23090HepG2XRCC6
HAMPENSG00000105697.3224.81890345.87200-0.621503.740902.97950HepG2ZC3H8
HAMPENSG00000105697.322.3079080.22300-1.846507.433106.64850HepG2ZNF622
HAMPENSG00000105697.379.04620243.23350-1.6216011.962009.20000HepG2ZRANB2
HAMPENSG00000105697.30.4825013.07190-4.759802.935201.71430K562AARS
HAMPENSG00000105697.338.956406.692102.541204.819402.53270K562ADAR
HAMPENSG00000105697.367.6694033.095601.031802.466201.92510K562AGGF1
HAMPENSG00000105697.369.3976036.364800.932202.322901.43470K562AKAP8
HAMPENSG00000105697.389.8942016.112002.480009.098108.13330K562AQR
HAMPENSG00000105697.366.172109.993902.727007.546605.74220K562CNOT7
HAMPENSG00000105697.365.2863020.794701.650504.248402.72930K562DDX21
HAMPENSG00000105697.342.3410017.554501.270102.611801.35590K562DDX6
HAMPENSG00000105697.326.035604.655002.483503.404602.38210K562FTO
HAMPENSG00000105697.32.3808018.81390-2.982303.132902.49470K562FXR1
HAMPENSG00000105697.330.378005.155002.558903.400802.52300K562GPKOW
HAMPENSG00000105697.327.021606.846401.980602.816301.30630K562ILF3
HAMPENSG00000105697.317.4756040.94280-1.228302.387201.55140K562MBNL1
HAMPENSG00000105697.367.3620025.381401.408102.695901.58230K562MSI2
HAMPENSG00000105697.358.6868017.192901.771104.730103.69560K562MTPAP
HAMPENSG00000105697.372.6868019.111201.927206.348805.28040K562NSUN2
HAMPENSG00000105697.363.080709.601102.715807.081405.12590K562PABPC1
HAMPENSG00000105697.352.5829011.076202.247004.150202.87390K562PABPN1
HAMPENSG00000105697.327.916807.747501.849202.796901.97000K562PPIG
HAMPENSG00000105697.357.2303013.149102.121704.040102.15130K562PPP1R8
HAMPENSG00000105697.34.5583026.27480-2.527103.340402.15000K562SAFB
HAMPENSG00000105697.392.7425018.845402.2989010.195508.70240K562SF3A3
HAMPENSG00000105697.357.2817013.908402.042003.661601.93010K562SUPT6H
HAMPENSG00000105697.31.0559029.57010-4.807607.423106.06420K562SYNCRIP
HAMPENSG00000105697.361.6721012.006902.360706.489804.85650K562UCHL5
HAMPENSG00000105697.351.9738020.263301.358802.945902.20460K562UPF1
HAMPENSG00000105697.3100.2568017.339802.5314012.6339010.70830K562WDR3
HAMPENSG00000105697.346.7551018.023901.375102.947902.07430K562WDR43
HAMPENSG00000105697.386.7676018.140802.2578010.007708.25210K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HAMP is not available on ENCORE database.





1 RBPs can affect the splicing of HAMP :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEHAMPENSG00000105697.3chr19+357756913577575135773396357735703577584035776046-0.093000.000730.03777excludedHepG2PCBP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for HAMP is not avaliable on ENCORE database.