NFATC3

General Information

Gene Name : NFATC3
Gene ID : ENSG00000072736.18
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: NFATC3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	NFATC3	ENSG00000072736.18	18.61	16.62	17.62	ENCSR000AEF
HepG2	NFATC3	ENSG00000072736.18	30.43	41.65	36.04	ENCSR985KAT
K562	NFATC3	ENSG00000072736.18	39.94	42.79	41.36	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for NFATC3 is not avaliable on ENCORE database.

Proteins bound to RNA

NFATC3 RNA is bound by 51 proteins.

CanvasJS.com

eCLIP assay for NFATC3 is not avaliable on ENCORE database.

51 proteins are bound to NFATC3 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	68156471	68156545	+	CDS,intron-Distal	5.63400	41.78184	K562	IGF2BP1
chr16	68260828	68260913	+	3'-UTR	4.62259	41.45035	K562	PABPC4
chr16	68262149	68262251	+	3'-UTR	4.50160	37.62805	K562	FAM120A
chr16	68225557	68225619	+	3'-UTR,CDS	7.05020	37.53522	K562	RBM15
chr16	68119905	68120006	+	intron-Distal,intron-Proximal	4.27418	34.84010	HepG2	HNRNPM
chr16	68262057	68262141	+	3'-UTR	3.93057	33.97506	K562	UPF1
chr16	68262063	68262149	+	3'-UTR	3.80260	32.78974	K562	FAM120A
chr16	68156372	68156478	+	CDS,intron-Distal	4.14847	29.30133	K562	IGF2BP2
chr16	68144236	68144269	+	intron-Distal	5.26531	26.45315	K562	EXOSC5
chr16	68144224	68144236	+	intron-Distal	5.26531	26.45315	K562	EXOSC5
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 311 entries

eCLIP assay for NFATC3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for NFATC3 is not available on ENCORE database.
128 RBPs can affect the levels of NFATC3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for NFATC3 is not available on ENCORE database.

128 RBPs can affect the gene expression of NFATC3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
NFATC3	ENSG00000072736.14	1946.31420	4420.54450	-1.18350	62.80400	61.04440	HepG2	NELFE
NFATC3	ENSG00000072736.14	2228.50130	4533.71740	-1.02460	56.73420	55.22250	HepG2	SRFBP1
NFATC3	ENSG00000072736.14	1806.81860	4301.78410	-1.25150	52.03510	49.98620	HepG2	QKI
NFATC3	ENSG00000072736.14	2041.49830	3794.37960	-0.89420	45.41970	43.44010	HepG2	SUCLG1
NFATC3	ENSG00000072736.14	1623.70390	3151.20150	-0.95660	44.17160	42.47040	HepG2	ACO1
NFATC3	ENSG00000072736.14	1413.21720	2879.91800	-1.02700	41.45650	38.97750	HepG2	PARN
NFATC3	ENSG00000072736.14	2520.34930	4767.76880	-0.91970	40.04550	38.59890	HepG2	ZNF622
NFATC3	ENSG00000072736.14	1627.60230	4691.33080	-1.52720	33.19140	31.61390	HepG2	AKAP1
NFATC3	ENSG00000072736.14	2240.17300	3587.04530	-0.67920	29.59320	28.07080	HepG2	PUM1
NFATC3	ENSG00000072736.14	1405.71880	2827.09200	-1.00800	28.92540	27.62310	HepG2	TIAL1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 151 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for NFATC3 is not available on ENCORE database.

22 RBPs can affect the splicing of NFATC3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	NFATC3	ENSG00000072736.14	chr16	+	68255133	68255288			68224670	68225678	68260252	68260837	0.18200	0.00000	0.00630	included	K562	ILF3
SE	NFATC3	ENSG00000072736.14	chr16	+	68255098	68255187			68224670	68225678	68260252	68263161	-0.13000	0.00000	0.00001	excluded	K562	HNRNPU
MXE	NFATC3	ENSG00000072736.14	chr16	+	68215377	68215433	68217142	68217269	68208276	68208417	68224670	68225678	-0.11700	0.00000	0.00000	2included	HepG2	U2AF2
MXE	NFATC3	ENSG00000072736.14	chr16	+	68248231	68248335	68255133	68255288	68224670	68225678	68260252	68260837	0.39500	0.00000	0.00013	1included	K562	HNRNPU
MXE	NFATC3	ENSG00000072736.14	chr16	+	68248231	68248335	68255098	68255288	68224670	68225678	68260252	68260837	0.44800	0.00000	0.00002	1included	K562	HNRNPU
MXE	NFATC3	ENSG00000072736.14	chr16	+	68215377	68215433	68217142	68217269	68208276	68208417	68224670	68225678	-0.09500	0.00001	0.00030	2included	HepG2	HNRNPUL1
SE	NFATC3	ENSG00000072736.14	chr16	+	68255098	68255187			68224670	68225678	68260252	68263161	-0.16900	0.00002	0.00040	excluded	HepG2	U2AF2
SE	NFATC3	ENSG00000072736.14	chr16	+	68255098	68255187			68224670	68225678	68260252	68263161	0.13600	0.00007	0.00243	included	K562	SRSF1
SE	NFATC3	ENSG00000072736.14	chr16	+	68127258	68127362			68118653	68119083	68155889	68157024	0.11800	0.00007	0.01333	included	K562	CPSF6
MXE	NFATC3	ENSG00000072736.14	chr16	+	68248231	68248335	68255098	68255288	68224670	68225678	68260252	68260837	0.46300	0.00007	0.00381	1included	HepG2	HNRNPU

Showing 1 to 10 of 36 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

NFATC3

General Information

Functions

Localization

Domains (AlphaFold: NFATC3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for NFATC3 is not avaliable on ENCORE database.

51 proteins are bound to NFATC3 RNA:

eCLIP assay for NFATC3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for NFATC3 is not available on ENCORE database.

128 RBPs can affect the gene expression of NFATC3 :

The Knockdown/knockout RNA-Seq assay for NFATC3 is not available on ENCORE database.

22 RBPs can affect the splicing of NFATC3 :

The Knockdown/knockout RNA-Seq assay for NFATC3 is not avaliable on ENCORE database.