HSD17B4

General Information

Gene Name : HSD17B4
Gene ID : ENSG00000133835.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: HSD17B4)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	HSD17B4	ENSG00000133835.15	80.76	66.37	73.56	ENCSR000AEF
HepG2	HSD17B4	ENSG00000133835.15	170.25	206.43	188.34	ENCSR985KAT
K562	HSD17B4	ENSG00000133835.15	68.90	79.89	74.40	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for HSD17B4 is not avaliable on ENCORE database.

Proteins bound to RNA

HSD17B4 RNA is bound by 27 proteins.

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eCLIP assay for HSD17B4 is not avaliable on ENCORE database.

27 proteins are bound to HSD17B4 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr5	118870520	118870588	+	intron-Distal	4.73131	17.93285	HepG2	QKI
chr5	118824952	118825018	+	5'-UTR,CDS,intron-Proximal	4.46362	16.86672	HepG2	PRPF8
chr5	118829582	118829629	+	5'-UTR,CDS	3.55410	15.52439	HepG2	BCLAF1
chr5	118814531	118814597	+	5'-UTR,CDS	4.11651	15.02931	HepG2	BCLAF1
chr5	118865587	118865666	+	3'-UTR,CDS,intron-Proximal	3.32141	13.35189	HepG2	BCLAF1
chr5	118805962	118806065	+	intron-Distal	5.68238	12.96579	HepG2	HNRNPM
chr5	118832237	118832328	+	CDS,intron-Proximal	3.15395	12.66444	HepG2	BCLAF1
chr5	118811517	118811565	+	5'-UTR,CDS,intron-Proximal	3.49569	12.47924	HepG2	PPIG
chr5	118805662	118805774	+	intron-Distal	4.50829	12.44645	HepG2	HNRNPM
chr5	118811518	118811567	+	5'-UTR,CDS,intron-Proximal	4.18576	12.07231	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 115 entries

eCLIP assay for HSD17B4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for HSD17B4 is not available on ENCORE database.
117 RBPs can affect the levels of HSD17B4.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for HSD17B4 is not available on ENCORE database.

117 RBPs can affect the gene expression of HSD17B4 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
HSD17B4	ENSG00000133835.10	1389.98820	4428.42500	-1.67170	105.09910	102.43780	HepG2	CELF1
HSD17B4	ENSG00000133835.10	9943.56080	4830.73520	1.04140	69.56790	67.87480	HepG2	SSB
HSD17B4	ENSG00000133835.10	1792.25620	3849.35520	-1.10280	62.14040	60.20510	HepG2	ACO1
HSD17B4	ENSG00000133835.10	2294.47720	4742.94350	-1.04760	58.57050	56.70320	HepG2	SRSF9
HSD17B4	ENSG00000133835.10	2874.87040	5563.74940	-0.95260	53.94020	52.46050	HepG2	SRFBP1
HSD17B4	ENSG00000133835.10	1767.86440	3560.00240	-1.00990	53.51710	51.08210	HepG2	DDX19B
HSD17B4	ENSG00000133835.10	7290.50790	3920.78620	0.89480	52.06600	50.10460	HepG2	PUS1
HSD17B4	ENSG00000133835.10	3208.31730	5617.15050	-0.80800	49.62030	48.04890	HepG2	ZNF622
HSD17B4	ENSG00000133835.10	3088.91290	5585.40780	-0.85460	39.00350	37.26900	HepG2	SF3B4
HSD17B4	ENSG00000133835.10	2634.08360	4337.41550	-0.71950	34.58090	32.52100	HepG2	HNRNPL
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 136 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for HSD17B4 is not available on ENCORE database.

35 RBPs can affect the splicing of HSD17B4 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	HSD17B4	ENSG00000133835.10	chr5	+	118807330	118807395	118792009	118792063	118809602	118809710	0.20900	0.00024	included	K562	PRPF8
SE	HSD17B4	ENSG00000133835.10	chr5	+	118807330	118807395	118792009	118792063	118809602	118809710	0.13500	0.00081	included	HepG2	PRPF8
SE	HSD17B4	ENSG00000133835.10	chr5	+	118807330	118807395	118792009	118792063	118809602	118809710	0.09000	0.00000	included	HepG2	HNRNPK
SE	HSD17B4	ENSG00000133835.10	chr5	+	118807330	118807395	118792009	118792063	118809602	118809710	0.08400	0.02084	included	HepG2	SDAD1
SE	HSD17B4	ENSG00000133835.10	chr5	+	118807330	118807395	118792009	118792063	118809602	118809710	0.14300	0.00000	included	HepG2	EFTUD2
SE	HSD17B4	ENSG00000133835.10	chr5	+	118807330	118807395	118792009	118792063	118809602	118809710	0.20100	0.00048	included	K562	EFTUD2
SE	HSD17B4	ENSG00000133835.10	chr5	+	118807330	118807395	118792009	118792063	118809602	118809710	0.11600	0.00001	included	HepG2	PCBP2
SE	HSD17B4	ENSG00000133835.10	chr5	+	118807330	118807395	118792009	118792063	118809602	118809710	0.07500	0.00000	included	HepG2	SF3A3
SE	HSD17B4	ENSG00000133835.10	chr5	+	118807330	118807395	118792009	118792063	118809602	118809710	-0.05500	0.00096	excluded	K562	HNRNPUL1
SE	HSD17B4	ENSG00000133835.10	chr5	+	118807330	118807395	118792009	118792063	118809602	118809710	0.09000	0.00002	included	HepG2	SF3B4

Showing 1 to 10 of 46 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

HSD17B4

General Information

Functions

Localization

Domains (AlphaFold: HSD17B4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for HSD17B4 is not avaliable on ENCORE database.

27 proteins are bound to HSD17B4 RNA:

eCLIP assay for HSD17B4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for HSD17B4 is not available on ENCORE database.

117 RBPs can affect the gene expression of HSD17B4 :

The Knockdown/knockout RNA-Seq assay for HSD17B4 is not available on ENCORE database.

35 RBPs can affect the splicing of HSD17B4 :

The Knockdown/knockout RNA-Seq assay for HSD17B4 is not avaliable on ENCORE database.