GCKR

General Information

Gene Name       : GCKR
Gene ID             : ENSG00000084734.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GCKR)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GCKRENSG00000084734.80.000.000.00ENCSR000AEF
HepG2GCKRENSG00000084734.817.9719.1318.55ENCSR985KAT
K562GCKRENSG00000084734.80.490.300.40ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GCKR is not avaliable on ENCORE database.



Proteins bound to RNA
  • GCKR RNA is bound by 16 proteins.  







eCLIP assay for GCKR is not avaliable on ENCORE database.





16 proteins are bound to GCKR RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr22772226327722296+3'-UTR,5'-UTR,CDS,intron-Proximal5.0978215.70082HepG2PPIG
chr22774633527746369+3'-UTR4.217864.18170HepG2PABPN1
chr22772400127724037+3'-UTR,5'-UTR,CDS,intron-Proximal6.1150017.51997HepG2PPIG
chr22772229627722317+3'-UTR,5'-UTR,CDS5.1848615.33327HepG2PPIG
chr22771978627719831+5'-UTR,CDS3.614895.58683HepG2GRWD1
chr22772156227721616+5'-UTR,CDS,intron-Proximal5.240344.45977HepG2U2AF2
chr22772113927721178+5'-UTR,CDS3.166435.54641HepG2PPIG
chr22772022727720266+5'-UTR,CDS3.535523.61617HepG2SRSF7
chr22771979827719831+5'-UTR,CDS4.097326.08299HepG2PPIG
chr22772163627721664+5'-UTR,CDS4.6962711.38699HepG2PPIG
chr22772110027721165+5'-UTR,CDS,intron-Proximal4.168546.77200HepG2U2AF2
chr22772849727728591+CDS,intron-Proximal3.448273.59805HepG2SF3B4
chr22773108927731118+CDS3.497438.16183HepG2BCLAF1
chr22772646827726509+CDS,intron-Proximal4.848789.10443HepG2PRPF8
chr22772857127728600+CDS,intron-Proximal4.654433.12827HepG2U2AF2
chr22774177527741802+CDS4.044253.33617HepG2PABPN1
chr22773109827731116+CDS4.084684.96634HepG2PPIG
chr22772647227726525+CDS,intron-Proximal4.778819.95004HepG2BUD13
chr22773061027730644+CDS3.499726.54857HepG2PPIG
chr22772405927724081+CDS4.662325.56813HepG2PPIG
chr22773007727730145+CDS,intron-Proximal3.562927.45393HepG2U2AF2
chr22772202927722074+CDS,intron-Distal5.9258711.86816HepG2PPIG
chr22774165427741666+CDS,intron-Proximal3.761505.24452HepG2PPIG
chr22772850227728623+CDS,intron-Proximal3.078325.85137HepG2QKI
chr22772929727729350+CDS,intron-Proximal6.5367019.10648HepG2SF3B4
chr22772932327729360+CDS,intron-Proximal4.401033.59236HepG2AQR
chr22772849627728618+CDS,intron-Proximal5.313245.32906HepG2AQR
chr22772943227729503+CDS,intron-Proximal4.5603915.22008HepG2PRPF8
chr22772989727729995+intron-Distal4.5969723.11950HepG2HNRNPK
chr22772086327720921+intron-Distal5.085676.15877HepG2U2AF2
chr22772999527730070+intron-Distal,intron-Proximal4.4175019.19507HepG2HNRNPK
chr22772978327729879+intron-Distal,intron-Proximal4.3475320.17007HepG2HNRNPK
chr22772952527729585+intron-Distal,intron-Proximal3.119095.01757HepG2RBFOX2
chr22772053027720642+intron-Distal,intron-Proximal4.3074518.45877HepG2PTBP1
chr22772852427728556+intron-Proximal3.251609.50423HepG2RBFOX2
chr22773007627730093+intron-Proximal4.964487.45449HepG2SF3B4
chr22772849327728524+intron-Proximal3.410559.88676HepG2RBFOX2
chr22772650927726558+intron-Proximal3.884769.09021HepG2PRPF8
chr22773005927730076+intron-Proximal5.172007.45449HepG2SF3B4
chr22772106827721118+intron-Proximal4.100693.98315HepG2SF3B4
chr22772650227726564+intron-Proximal3.797174.81289HepG2RBM22
chr22772649727726558+intron-Proximal3.277045.99889HepG2TIAL1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GCKR is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GCKR is not available on ENCORE database.

  • 129 RBPs can affect the levels of GCKR.  








The Knockdown/knockout RNA-Seq assay for GCKR is not available on ENCORE database.





129 RBPs can affect the gene expression of GCKR :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GCKRENSG00000084734.4435.20650604.47180-0.474002.633601.71410HepG2ABCF1
GCKRENSG00000084734.4170.53600425.11170-1.3178019.8292018.52730HepG2ACO1
GCKRENSG00000084734.4268.47790370.51610-0.464702.402201.47030HepG2ADAR
GCKRENSG00000084734.4126.959801166.96490-3.2003077.7284075.55680HepG2AKAP1
GCKRENSG00000084734.4660.79250427.139500.629407.670106.46850HepG2AKAP8L
GCKRENSG00000084734.4893.63550545.242600.712707.371505.19860HepG2ATP5C1
GCKRENSG00000084734.4681.95910246.081201.4705017.2272015.29890HepG2BCLAF1
GCKRENSG00000084734.4641.50240299.270401.0999011.9763010.84900HepG2BOP1
GCKRENSG00000084734.4736.04260452.753600.701007.022205.13010HepG2BUD13
GCKRENSG00000084734.4651.24040454.436200.519002.878702.09380HepG2CALR
GCKRENSG00000084734.4974.72830601.468600.696405.313803.94520HepG2CCAR1
GCKRENSG00000084734.4545.84710917.35550-0.749007.556106.32730HepG2CIRBP
GCKRENSG00000084734.4461.147301158.18180-1.3286013.8815012.22210HepG2CNOT7
GCKRENSG00000084734.4392.46200274.736300.514402.645101.97110HepG2CPSF6
GCKRENSG00000084734.4656.35740497.631500.399302.445901.41040HepG2CPSF7
GCKRENSG00000084734.4115.09890174.89980-0.603702.581501.53850HepG2CSTF2
GCKRENSG00000084734.41125.69700666.346300.7564017.2233015.65870HepG2DAZAP1
GCKRENSG00000084734.4286.90160393.18430-0.454603.568802.63730HepG2DDX19B
GCKRENSG00000084734.4526.01570380.491000.467102.796901.63150HepG2DDX1
GCKRENSG00000084734.4720.70590487.590700.563604.959504.07860HepG2DDX21
GCKRENSG00000084734.4541.978701117.87030-1.0444013.7699012.48020HepG2DDX3X
GCKRENSG00000084734.42782.736301516.323200.8758016.5187013.85600HepG2DDX47
GCKRENSG00000084734.4428.92650278.522300.622802.686501.92210HepG2DDX55
GCKRENSG00000084734.4528.63310311.986600.760702.834601.84510HepG2DDX59
GCKRENSG00000084734.4857.85880485.423200.821405.962804.53180HepG2DDX5
GCKRENSG00000084734.4929.81080359.847901.3695011.577309.75460HepG2DHX30
GCKRENSG00000084734.4645.28390373.094400.7903010.368909.07840HepG2DNAJC21
GCKRENSG00000084734.4775.50290369.793701.0683024.7085022.94110HepG2DNAJC2
GCKRENSG00000084734.4380.05690519.50600-0.450902.488001.61040HepG2EEF2
GCKRENSG00000084734.4255.80080433.03340-0.759505.755104.15100HepG2EFTUD2
GCKRENSG00000084734.4711.651701020.17970-0.519603.568402.84460HepG2EIF4A3
GCKRENSG00000084734.41349.44750657.372801.037508.072606.78300HepG2EIF4G1
GCKRENSG00000084734.4197.89520415.44270-1.0699011.185309.53420HepG2EWSR1
GCKRENSG00000084734.4336.38900610.33730-0.859506.999105.83310HepG2FIP1L1
GCKRENSG00000084734.4504.24050231.799501.121104.783203.14710HepG2FKBP4
GCKRENSG00000084734.4969.89590275.228501.817108.599706.83070HepG2FTO
GCKRENSG00000084734.4581.473501029.29710-0.823908.987307.80480HepG2FXR1
GCKRENSG00000084734.41150.41600311.406901.8852036.3889034.36850HepG2GPKOW
GCKRENSG00000084734.4524.320801072.21350-1.032109.743607.66720HepG2GRSF1
GCKRENSG00000084734.4610.03100405.882200.587706.873405.41890HepG2HDGF
GCKRENSG00000084734.4856.05440612.380800.483205.581804.33480HepG2HNRNPA2B1
GCKRENSG00000084734.4181.78370418.97220-1.2046011.5238010.19170HepG2HNRNPC
GCKRENSG00000084734.41542.134301003.240200.620204.688702.71710HepG2HNRNPD
GCKRENSG00000084734.4578.59930243.798601.2468021.2942019.56290HepG2HNRNPF
GCKRENSG00000084734.4559.04590966.83090-0.790308.939007.73910HepG2HNRNPK
GCKRENSG00000084734.41176.04410297.183801.9844024.9634023.38060HepG2HNRNPLL
GCKRENSG00000084734.4237.72750421.01180-0.824607.413605.96990HepG2HNRNPM
GCKRENSG00000084734.4692.52480416.202400.734509.358808.29390HepG2HNRNPU
GCKRENSG00000084734.4913.970101439.06920-0.654905.511703.79320HepG2HSPD1
GCKRENSG00000084734.4691.09970240.069601.5253028.5069026.48460HepG2IGF2BP1
GCKRENSG00000084734.41535.64400970.573200.661807.078506.04760HepG2IGF2BP2
GCKRENSG00000084734.4293.69200910.82490-1.632909.396407.66760HepG2IGF2BP3
GCKRENSG00000084734.4592.69050425.137300.479205.213204.23360HepG2ILF2
GCKRENSG00000084734.4637.71040455.930700.484003.214901.44290HepG2CCAR2
GCKRENSG00000084734.4728.21140388.628200.9059017.3371015.06780HepG2KIF1C
GCKRENSG00000084734.4278.23960504.74400-0.859208.269806.40150HepG2LARP7
GCKRENSG00000084734.4740.047101035.42270-0.484503.244302.56530HepG2MATR3
GCKRENSG00000084734.4178.74210441.31560-1.303907.824906.14580HepG2METAP2
GCKRENSG00000084734.4892.48580493.816600.8538010.640409.16170HepG2MSI2
GCKRENSG00000084734.41271.14930303.150302.067909.398807.58460HepG2MTPAP
GCKRENSG00000084734.4700.03250414.695600.755306.354104.53400HepG2NAA15
GCKRENSG00000084734.4782.911601059.81550-0.436902.993202.33520HepG2NCBP2
GCKRENSG00000084734.4943.78970263.530701.8404035.5057033.34560HepG2NSUN2
GCKRENSG00000084734.41827.50190943.847900.9531013.8631012.27700HepG2PABPC4
GCKRENSG00000084734.4273.43160411.97170-0.591404.873703.78760HepG2PARN
GCKRENSG00000084734.4325.66400990.77950-1.6052048.7168046.76390HepG2PCBP1
GCKRENSG00000084734.4578.63380404.294900.517103.608001.61970HepG2PES1
GCKRENSG00000084734.4868.55030371.219601.2262026.9374024.82670HepG2PPIL4
GCKRENSG00000084734.4515.64740408.131300.337302.279701.56960HepG2PRPF4
GCKRENSG00000084734.4315.64220511.65260-0.696903.886302.45560HepG2PRPF6
GCKRENSG00000084734.4105.82430214.73040-1.020904.867803.82920HepG2PRPF8
GCKRENSG00000084734.41006.59490630.734300.674304.737403.98300HepG2PUF60
GCKRENSG00000084734.4433.14190669.54520-0.628308.733907.80480HepG2PUM1
GCKRENSG00000084734.41813.19340433.009202.06600116.93790114.21150HepG2PUS1
GCKRENSG00000084734.41352.907201091.862500.309202.810802.18170HepG2QKI
GCKRENSG00000084734.4297.70680469.74240-0.658002.757002.05400HepG2RAVER1
GCKRENSG00000084734.4387.92430638.90750-0.719807.517906.76220HepG2RBM22
GCKRENSG00000084734.4660.44990990.93110-0.585306.505105.51090HepG2RBM25
GCKRENSG00000084734.4242.40040608.65200-1.3282017.7077015.21950HepG2RBM27
GCKRENSG00000084734.4260.061801121.97840-2.1091075.3609073.50310HepG2NELFE
GCKRENSG00000084734.4609.001301044.96240-0.7789014.3629013.12840HepG2RECQL
GCKRENSG00000084734.4714.98540262.667001.4446022.2631020.70750HepG2RPLP0
GCKRENSG00000084734.4175.66640410.35690-1.2240013.3945012.17160HepG2RPS19
GCKRENSG00000084734.4412.99180561.31650-0.442702.804401.99850HepG2RPS2
GCKRENSG00000084734.4325.67530573.00590-0.815106.019504.42640HepG2RPS5
GCKRENSG00000084734.4110.05260212.40040-0.948604.903803.88960HepG2RRP9
GCKRENSG00000084734.4749.03890370.647801.0149020.1819018.66640HepG2SAFB2
GCKRENSG00000084734.4222.29730889.48460-2.0005022.6428020.66270HepG2SF3A3
GCKRENSG00000084734.4729.73320294.137101.3108019.2662017.58290HepG2SF3B1
GCKRENSG00000084734.4382.211701049.62360-1.4574040.8361039.07260HepG2SF3B4
GCKRENSG00000084734.4979.10860604.761200.695007.419506.35610HepG2SLBP
GCKRENSG00000084734.41008.37120458.172801.138006.305704.00970HepG2SLTM
GCKRENSG00000084734.4272.73890432.24010-0.664306.679305.74780HepG2SMN1
GCKRENSG00000084734.4186.62700721.60330-1.9510051.8617050.40790HepG2SRFBP1
GCKRENSG00000084734.4234.466301095.57590-2.2242082.1012080.33990HepG2SRSF1
GCKRENSG00000084734.4641.73670239.532401.4217028.6829026.90550HepG2SRSF7
GCKRENSG00000084734.4416.99840891.30600-1.0959025.2153023.86220HepG2SRSF9
GCKRENSG00000084734.4784.33140626.488800.324102.818302.30230HepG2SSB
GCKRENSG00000084734.4926.380801433.86410-0.630206.021804.22500HepG2SSRP1
GCKRENSG00000084734.4770.76620407.527000.919307.943105.98260HepG2STAU1
GCKRENSG00000084734.4706.39040438.963900.686303.823302.40130HepG2SUB1
GCKRENSG00000084734.41208.08710984.735600.294802.645502.09600HepG2TAF15
GCKRENSG00000084734.4889.68070289.736701.6184030.3970028.47500HepG2TARDBP
GCKRENSG00000084734.41223.36220904.849300.435004.424503.37500HepG2TIA1
GCKRENSG00000084734.4643.73320408.033100.657708.637007.72700HepG2TRIM56
GCKRENSG00000084734.4353.62620616.18910-0.801108.569706.88750HepG2TUFM
GCKRENSG00000084734.4266.48090522.01820-0.970109.118807.97060HepG2U2AF1
GCKRENSG00000084734.4863.59190652.218800.404902.306101.54720HepG2UBE2L3
GCKRENSG00000084734.41065.98680788.831500.434303.058402.33220HepG2UPF1
GCKRENSG00000084734.4602.70980253.758701.247909.801907.85240HepG2UPF2
GCKRENSG00000084734.41298.24500810.849100.6790012.4328010.42590HepG2UTP18
GCKRENSG00000084734.4408.19520761.59410-0.899805.801504.98690HepG2UTP3
GCKRENSG00000084734.4226.09180516.51530-1.191908.225906.49550HepG2XRCC6
GCKRENSG00000084734.4464.30770272.901500.766603.154302.38140HepG2XRN2
GCKRENSG00000084734.4298.13360402.79350-0.434103.147002.43850HepG2ZC3H8
GCKRENSG00000084734.42461.49870867.571301.5044036.3690034.97100HepG2ZNF622
GCKRENSG00000084734.425.566202.384003.422704.632403.06380K562AARS
GCKRENSG00000084734.427.882903.298703.079303.240002.53140K562AKAP8L
GCKRENSG00000084734.435.603702.804503.666106.385704.90200K562BCLAF1
GCKRENSG00000084734.420.357703.790502.425002.678601.52670K562CCDC124
GCKRENSG00000084734.420.308404.236302.261102.549201.32200K562CIRBP
GCKRENSG00000084734.475.3534016.207202.216907.250604.82380K562CKAP4
GCKRENSG00000084734.446.590409.690002.265404.456003.03000K562CPEB4
GCKRENSG00000084734.466.4795015.967102.057703.421602.38060K562EIF4G2
GCKRENSG00000084734.453.6925014.313501.907204.521403.06780K562GLRX3
GCKRENSG00000084734.461.638306.461903.253708.591506.08840K562ILF2
GCKRENSG00000084734.4155.1403017.592303.140503.342302.30640K562KRR1
GCKRENSG00000084734.492.9023017.019802.448409.957007.90980K562MSI2
GCKRENSG00000084734.425.072704.687402.419102.915801.45430K562RAVER1
GCKRENSG00000084734.416.226903.187902.347601.901501.39380K562RBM15
GCKRENSG00000084734.417.989303.873502.215302.418301.63550K562RBM22
GCKRENSG00000084734.446.0036016.910001.443803.014602.04440K562SRPK2
GCKRENSG00000084734.437.384707.469102.323304.250302.63750K562STAU1
GCKRENSG00000084734.449.323306.286402.971906.153903.76450K562STIP1
GCKRENSG00000084734.442.073204.822703.124904.812402.67150K562TAF15
GCKRENSG00000084734.446.520504.004503.538104.761803.82560K562TARDBP
GCKRENSG00000084734.424.477802.390803.355804.330003.08530K562TRIM56
GCKRENSG00000084734.458.295206.191203.235009.772507.37220K562TROVE2
GCKRENSG00000084734.420.114403.334902.592402.608501.62310K562UCHL5
GCKRENSG00000084734.434.282105.675302.594605.040403.41860K562UTP3
GCKRENSG00000084734.438.254005.720102.741405.782203.91520K562WRN
GCKRENSG00000084734.438.799205.427502.837606.351204.95770K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GCKR is not available on ENCORE database.





9 RBPs can affect the splicing of GCKR :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEGCKRENSG00000084734.4chr2+2772133727721464277211212772119027721590277216640.097000.000740.02094includedHepG2HNRNPK
SEGCKRENSG00000084734.4chr2+2772042827720497277201102772026627721121277211900.065000.000870.06802includedHepG2QKI
SEGCKRENSG00000084734.4chr2+277220082772207527721590277216642772226327722317-0.170000.001580.09363excludedHepG2DDX3X
SEGCKRENSG00000084734.4chr2+277220082772207527721590277216642772226327722317-0.266000.000320.01010excludedHepG2SRSF1
SEGCKRENSG00000084734.4chr2+277285842772870327726380277264862772934727729758-0.327000.000040.00236excludedHepG2SF3A3
SEGCKRENSG00000084734.4chr2+277220082772207527721590277216642772226327722317-0.516000.000000.00000excludedHepG2PCBP1
SEGCKRENSG00000084734.4chr2+277296542772975227729347277294462773010127730178-0.464000.000320.01961excludedHepG2PCBP1
SEGCKRENSG00000084734.4chr2+277296542772975227729347277294462773010127730178-0.340000.002730.09789excludedHepG2SF3B4
SEGCKRENSG00000084734.4chr2+2772200827722075277215902772166427722263277223170.206000.000560.02738includedHepG2HNRNPU
SEGCKRENSG00000084734.4chr2+277296542772975227729347277294462773010127730178-0.428000.000000.00024excludedHepG2SRSF9

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for GCKR is not avaliable on ENCORE database.