CDT1

General Information

Gene Name       : CDT1
Gene ID             : ENSG00000167513.8
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: CDT1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CDT1ENSG00000167513.80.832.961.90ENCSR000AEF
HepG2CDT1ENSG00000167513.832.524.0718.30ENCSR985KAT
K562CDT1ENSG00000167513.834.046.2820.16ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CDT1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CDT1 RNA is bound by 20 proteins.  







eCLIP assay for CDT1 is not avaliable on ENCORE database.





20 proteins are bound to CDT1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr168887541888875468+3'-UTR4.504144.22051K562UPF1
chr168887497088875070+3'-UTR3.533838.00041K562UPF1
chr168887466688874722+3'-UTR,CDS3.682237.27995K562PABPC4
chr168887548188875495+3'-UTR3.523629.84609K562YBX3
chr168887484688874887+3'-UTR4.036185.21205K562DDX6
chr168887492888875074+3'-UTR6.7220917.75883HepG2GRSF1
chr168887476988874826+3'-UTR3.280865.28657K562RBM15
chr168887549588875501+3'-UTR4.0511811.45100K562YBX3
chr168887556788875606+3'-UTR3.349213.42164K562UPF1
chr168887476688874837+3'-UTR5.3329157.66087K562PABPC4
chr168887476988874819+3'-UTR3.587166.10016K562DDX6
chr168887476488874811+3'-UTR3.908338.35256K562METAP2
chr168887484888874880+3'-UTR3.790785.76576K562PABPC4
chr168887020288870273+5'-UTR,CDS3.0270010.39246K562PCBP1
chr168887021188870261+5'-UTR,CDS3.153038.50407K562DDX3X
chr168887021688870314+5'-UTR,CDS5.4745424.96302K562SERBP1
chr168887177788871866+CDS,intron-Proximal3.700763.81059HepG2AQR
chr168887130588871312+CDS,intron-Proximal4.2391110.58560K562AQR
chr168887297788873016+CDS4.284617.83352K562METAP2
chr168887373188873761+CDS3.760968.72164K562METAP2
chr168887353588873609+CDS4.4624424.54541K562METAP2
chr168887249088872502+CDS3.885016.30845K562METAP2
chr168887096188870995+CDS3.771897.84462K562METAP2
chr168887303888873055+CDS,intron-Proximal3.196737.58595K562METAP2
chr168887378288873807+CDS5.9906714.48252K562METAP2
chr168887026688870299+CDS4.1078226.28023K562YBX3
chr168887041588870451+CDS4.667495.73190K562SERBP1
chr168887208788872199+CDS,intron-Proximal3.5085311.06867HepG2BUD13
chr168887446288874552+CDS,intron-Proximal4.917246.38747HepG2AQR
chr168887308088873131+CDS,intron-Proximal3.696576.34662HepG2PRPF8
chr168887388988873909+CDS,intron-Proximal4.6112811.32600K562AQR
chr168887345888873476+CDS,intron-Proximal4.2992015.09075K562METAP2
chr168887351088873527+CDS3.1299814.15133K562YBX3
chr168887252888872536+CDS,intron-Proximal3.9288710.01959HepG2PRPF8
chr168887307188873082+CDS,intron-Proximal3.6180816.09678K562METAP2
chr168887387188873884+CDS3.3993713.97428K562METAP2
chr168887252888872532+CDS,intron-Proximal4.6530727.91084K562AQR
chr168887031488870392+CDS5.4204921.77185K562SERBP1
chr168887242888872443+CDS,intron-Proximal3.9658310.76498K562METAP2
chr168887129588871373+CDS,intron-Proximal4.421509.38298HepG2PRPF8
chr168887103488871055+CDS3.193998.34768K562YBX3
chr168887033288870436+CDS4.4289212.38387K562SDAD1
chr168887102488871034+CDS3.271416.25729K562YBX3
chr168887030088870304+CDS4.6666521.98259K562YBX3
chr168887345888873490+CDS,intron-Proximal3.1775922.90448K562YBX3
chr168887284588872899+CDS,intron-Proximal3.000647.40146K562SF3B4
chr168887380788873862+CDS4.4833514.86666K562METAP2
chr168887289888872946+CDS4.054345.75237K562PCBP1
chr168887388688873947+CDS,intron-Proximal4.803689.10443HepG2PRPF8
chr168887445888874530+CDS,intron-Proximal3.4037712.15545K562SF3B4
chr168887024888870332+CDS3.458677.30419K562SDAD1
chr168887026188870339+CDS3.195915.26712K562DDX3X
chr168887250288872527+CDS3.887459.64677K562METAP2
chr168887302288873079+CDS,intron-Proximal3.091934.68592HepG2PPIG
chr168887350088873535+CDS4.1759914.24913K562METAP2
chr168887180088871901+CDS,intron-Proximal3.196818.62231K562AQR
chr168887226588872277+CDS3.6977111.29673K562METAP2
chr168887026388870266+CDS4.4929022.45409K562YBX3
chr168887347688873500+CDS4.7008116.99144K562METAP2
chr168887207988872143+CDS,intron-Proximal3.391188.69261K562BUD13
chr168887186488871918+CDS3.0561121.14550K562YBX3
chr168887357188873617+CDS,intron-Proximal3.191185.21025HepG2PPIG
chr168887224088872265+CDS3.5209910.24579K562METAP2
chr168887088888870968+CDS,intron-Proximal3.958765.59977HepG2AQR
chr168887215488872207+CDS5.2292116.04898K562METAP2
chr168887388488873890+CDS3.6611213.69940K562METAP2
chr168887452288874588+CDS,intron-Proximal3.6471323.51493K562METAP2
chr168887380388873852+CDS4.475154.82934K562RBM15
chr168887284888872934+CDS,intron-Proximal4.933096.90190HepG2AQR
chr168887462288874657+CDS4.4764511.42530K562METAP2
chr168887207788872135+CDS,intron-Proximal3.771098.23659K562EFTUD2
chr168887310788873157+intron-Distal,intron-Proximal5.3146614.66604HepG2RBM22
chr168887153988871610+intron-Distal5.111794.75034HepG2XPO5
chr168887057088870652+intron-Distal4.511257.65747HepG2EFTUD2
chr168887057788870653+intron-Distal3.403996.69747HepG2PRPF8
chr168887142288871449+intron-Distal4.324933.31283K562PRPF8
chr168887309688873151+intron-Distal,intron-Proximal4.6844413.38267K562AQR
chr168887059588870710+intron-Distal4.210123.77360K562GTF2F1
chr168887057488870620+intron-Distal4.300454.89208K562AQR
chr168887309788873171+intron-Distal,intron-Proximal3.625236.14054K562PRPF8
chr168887057988870720+intron-Distal5.9376414.10840K562PRPF8
chr168887262588872687+intron-Distal,intron-Proximal3.539885.17182HepG2RBM22
chr168887057388870666+intron-Distal5.950808.45613K562EFTUD2
chr168887111588871146+intron-Proximal4.046483.64950HepG2BUD13
chr168887390388873953+intron-Proximal3.559684.35635K562PRPF8
chr168887135088871404+intron-Proximal4.568747.54953HepG2RBM22
chr168887253588872586+intron-Proximal6.4138133.14333K562AQR
chr168887308288873096+intron-Proximal3.596404.41130K562AQR
chr168887179088871841+intron-Proximal5.363687.81477K562SF3B4
chr168887240188872426+intron-Proximal4.611515.68502HepG2PRPF8
chr168887110588871141+intron-Proximal4.407394.11693K562BUD13
chr168887110988871159+intron-Proximal3.978614.83721K562EFTUD2
chr168887131288871327+intron-Proximal6.2770412.64691K562AQR
chr168887110988871151+intron-Proximal5.9359010.20211HepG2EFTUD2
chr168887204988872131+intron-Proximal4.9965110.42975HepG2PRPF8
chr168887392788873988+intron-Proximal4.787886.01148HepG2EFTUD2
chr168887110788871159+intron-Proximal4.032207.67169K562SF3B4
chr168887207488872115+intron-Proximal3.729704.34418HepG2RBM22
chr168887390988873933+intron-Proximal5.3053312.17654K562AQR
chr168887253688872572+intron-Proximal4.4433911.83008HepG2PRPF8
chr168887365088873685+intron-Proximal5.320457.91936K562SF3B4
chr168887208588872109+intron-Proximal4.195695.16342K562SF3B4
chr168887111388871164+intron-Proximal3.554954.58287K562PRPF8
chr168887132788871349+intron-Proximal6.3460214.27141K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CDT1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CDT1 is not available on ENCORE database.

  • 135 RBPs can affect the levels of CDT1.  








The Knockdown/knockout RNA-Seq assay for CDT1 is not available on ENCORE database.





135 RBPs can affect the gene expression of CDT1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CDT1ENSG00000167513.4149.07040340.32460-1.190902.777201.70230HepG2AATF
CDT1ENSG00000167513.4531.34890870.98900-0.7130012.4546011.36390HepG2ACO1
CDT1ENSG00000167513.4411.68080199.195601.047203.525802.41470HepG2ADAR
CDT1ENSG00000167513.4128.99870653.90810-2.341707.220206.40510HepG2AKAP1
CDT1ENSG00000167513.4126.19370328.07070-1.378403.768602.56020HepG2AKAP8
CDT1ENSG00000167513.4584.19890875.06740-0.582908.211406.97620HepG2AKAP8L
CDT1ENSG00000167513.492.77690540.98170-2.543707.889306.59620HepG2ASCC1
CDT1ENSG00000167513.4530.250601238.08770-1.2234013.8566012.53060HepG2AUH
CDT1ENSG00000167513.450.53300569.58580-3.4946010.738509.66070HepG2BOP1
CDT1ENSG00000167513.4100.16600560.63690-2.4847048.0089045.63020HepG2CALR
CDT1ENSG00000167513.4210.87060513.99320-1.285403.606802.73250HepG2CIRBP
CDT1ENSG00000167513.4221.82340870.78320-1.9729068.7182066.47700HepG2CKAP4
CDT1ENSG00000167513.458.75550215.98180-1.878102.307701.61250HepG2CNOT7
CDT1ENSG00000167513.4284.95130522.86730-0.875702.106501.49730HepG2CPSF6
CDT1ENSG00000167513.4613.43330805.53250-0.393004.576403.53990HepG2DDX19B
CDT1ENSG00000167513.487.82620374.62020-2.092706.106205.14360HepG2DDX21
CDT1ENSG00000167513.4149.86320367.30850-1.293303.233302.24420HepG2DDX24
CDT1ENSG00000167513.490.15620626.23910-2.796209.058607.98190HepG2DDX3X
CDT1ENSG00000167513.4344.53920767.81780-1.1561016.9095014.23000HepG2DDX47
CDT1ENSG00000167513.4212.99740593.76860-1.479103.594702.48290HepG2DDX59
CDT1ENSG00000167513.4434.12160739.18440-0.767807.666006.06790HepG2DDX5
CDT1ENSG00000167513.4162.28630538.31830-1.729904.923204.12010HepG2DDX6
CDT1ENSG00000167513.4606.90530833.29620-0.457405.040104.17530HepG2DKC1
CDT1ENSG00000167513.4288.71870198.823200.538102.267301.66420HepG2DNAJC2
CDT1ENSG00000167513.476.43550345.57270-2.176706.128504.49080HepG2AGO1
CDT1ENSG00000167513.451.86360517.13520-3.3177010.889309.76070HepG2EIF2S1
CDT1ENSG00000167513.4107.76000400.34380-1.893402.281701.45260HepG2EIF3D
CDT1ENSG00000167513.4183.60400314.40730-0.776003.318001.39250HepG2EIF3H
CDT1ENSG00000167513.4180.75850571.31950-1.660204.795703.95730HepG2EIF4A3
CDT1ENSG00000167513.4205.97170556.59510-1.434203.042202.32380HepG2EIF4B
CDT1ENSG00000167513.4256.40340463.99290-0.855709.506408.13440HepG2EIF4G1
CDT1ENSG00000167513.4511.587101421.63960-1.4745017.1284015.84000HepG2ETF1
CDT1ENSG00000167513.4582.21110851.09730-0.547803.458502.52210HepG2EWSR1
CDT1ENSG00000167513.4166.52700357.37450-1.101702.797501.64840HepG2FASTKD2
CDT1ENSG00000167513.4469.87090991.02280-1.076704.675503.69610HepG2FIP1L1
CDT1ENSG00000167513.4151.53790523.85390-1.789504.891303.54850HepG2FTO
CDT1ENSG00000167513.4320.23160613.92020-0.9389011.090309.56270HepG2FUBP3
CDT1ENSG00000167513.4209.03950534.94380-1.355603.923603.13780HepG2G3BP1
CDT1ENSG00000167513.4104.76290202.49130-0.950703.477502.76340HepG2HNRNPA1
CDT1ENSG00000167513.4234.16540432.25610-0.884409.787208.22530HepG2HNRNPA2B1
CDT1ENSG00000167513.4639.71640428.504100.578002.664802.00280HepG2HNRNPL
CDT1ENSG00000167513.4243.75110565.53200-1.214203.231102.55750HepG2HNRNPLL
CDT1ENSG00000167513.4395.60980223.752600.822108.545207.52260HepG2HNRNPU
CDT1ENSG00000167513.469.83470543.65910-2.960709.676708.49980HepG2IGF2BP2
CDT1ENSG00000167513.4320.81540228.554500.489103.339902.54050HepG2ILF2
CDT1ENSG00000167513.4640.43550206.259901.634508.080005.94310HepG2KHDRBS1
CDT1ENSG00000167513.4182.95900356.80760-0.963602.490901.31640HepG2KRR1
CDT1ENSG00000167513.4372.85200801.55860-1.104206.089904.93200HepG2MSI2
CDT1ENSG00000167513.4697.02800466.424300.579501.975201.32760HepG2NOL12
CDT1ENSG00000167513.4382.00450172.232001.149107.222404.90550HepG2NOLC1
CDT1ENSG00000167513.4247.76270494.88970-0.9981010.569207.79430HepG2NUP35
CDT1ENSG00000167513.4110.43440528.59810-2.259007.066405.92220HepG2PABPC4
CDT1ENSG00000167513.496.02590340.53850-1.826302.318701.36550HepG2PCBP2
CDT1ENSG00000167513.4693.16430199.568001.7962010.080708.72240HepG2PPIL4
CDT1ENSG00000167513.4460.35580775.46500-0.752305.827304.74860HepG2PRPF4
CDT1ENSG00000167513.479.51640246.05070-1.629603.464702.57100HepG2PRPF8
CDT1ENSG00000167513.4304.34260607.25740-0.9966015.1465014.06490HepG2PTBP1
CDT1ENSG00000167513.4509.39050887.15640-0.8004015.3925014.14660HepG2PUS1
CDT1ENSG00000167513.4251.42980657.68000-1.3872023.8961022.31830HepG2QKI
CDT1ENSG00000167513.4704.266201095.05420-0.636802.591501.76000HepG2RBM15
CDT1ENSG00000167513.4162.061501188.19650-2.8742037.9636036.47520HepG2RBM22
CDT1ENSG00000167513.4290.96990596.88490-1.036605.140604.24780HepG2RBM25
CDT1ENSG00000167513.4667.61500378.621800.818203.864202.67810HepG2RBM27
CDT1ENSG00000167513.4497.84230208.750701.253803.205801.55100HepG2RBM47
CDT1ENSG00000167513.4893.51710629.432000.505301.887601.36530HepG2RECQL
CDT1ENSG00000167513.466.63390424.48930-2.6714041.5885039.67930HepG2RPLP0
CDT1ENSG00000167513.4103.23070389.71100-1.916502.461301.87760HepG2RPS19
CDT1ENSG00000167513.4189.30670349.13410-0.883102.363301.61960HepG2RPS2
CDT1ENSG00000167513.438.58390243.36470-2.657005.742504.65050HepG2RRP9
CDT1ENSG00000167513.4475.14400199.256701.253607.617106.62560HepG2SAFB2
CDT1ENSG00000167513.4585.94480958.73140-0.710405.025604.09840HepG2SF3A3
CDT1ENSG00000167513.4269.34220559.69620-1.055202.664001.97180HepG2SF3B1
CDT1ENSG00000167513.4456.20010632.23780-0.470804.370203.65300HepG2SF3B4
CDT1ENSG00000167513.4760.66390426.846500.833403.194902.44960HepG2SLBP
CDT1ENSG00000167513.4172.96430622.78480-1.848305.099004.02750HepG2SNRNP70
CDT1ENSG00000167513.4148.530801341.96930-3.1755045.6063044.21900HepG2SRFBP1
CDT1ENSG00000167513.4340.71790659.91760-0.9537014.0502013.16100HepG2SRSF1
CDT1ENSG00000167513.4282.41930387.11410-0.454902.474001.81170HepG2SRSF7
CDT1ENSG00000167513.4179.39430536.87650-1.5815030.8345029.37480HepG2SRSF9
CDT1ENSG00000167513.4486.545301165.05100-1.2597012.7322011.79060HepG2SSB
CDT1ENSG00000167513.4609.04390499.928000.284701.888501.35660HepG2SUCLG1
CDT1ENSG00000167513.4167.42140360.13230-1.105002.949601.57660HepG2SUGP2
CDT1ENSG00000167513.460.83190317.82790-2.385304.836103.97980HepG2SUPV3L1
CDT1ENSG00000167513.4215.18140593.15460-1.4629025.7245024.24740HepG2TAF15
CDT1ENSG00000167513.4166.61060551.53440-1.727004.219503.34810HepG2TARDBP
CDT1ENSG00000167513.4342.17460545.03360-0.671602.638301.82050HepG2TIA1
CDT1ENSG00000167513.478.35630217.38660-1.4721011.6287010.72940HepG2TIAL1
CDT1ENSG00000167513.4347.33800219.363000.662905.309404.57960HepG2TRIM56
CDT1ENSG00000167513.4377.75690847.46490-1.165705.740504.85270HepG2U2AF1
CDT1ENSG00000167513.4207.75040850.25110-2.0330046.3658044.26600HepG2UPF1
CDT1ENSG00000167513.4393.62030873.91730-1.1507021.5171019.05080HepG2UTP18
CDT1ENSG00000167513.4558.50820820.87960-0.555606.773505.90660HepG2UTP3
CDT1ENSG00000167513.4594.75020312.869500.926603.142802.37170HepG2XRN2
CDT1ENSG00000167513.4547.65970765.25390-0.482705.748404.83470HepG2ZC3H8
CDT1ENSG00000167513.491.13200935.10930-3.3591098.6900096.69530HepG2ZNF622
CDT1ENSG00000167513.48736.106604418.199400.9834027.6191025.93370K562AGGF1
CDT1ENSG00000167513.42856.368002299.473300.312803.963502.12690K562AKAP1
CDT1ENSG00000167513.47175.857104855.456500.563403.554502.40580K562AKAP8
CDT1ENSG00000167513.46929.829404597.465400.591902.469301.85150K562AKAP8L
CDT1ENSG00000167513.46138.333004824.091200.347502.483201.62140K562ATP5C1
CDT1ENSG00000167513.41489.19120761.094700.968302.937801.58180K562BCCIP
CDT1ENSG00000167513.42175.79260735.583201.5645019.6905017.15810K562BCLAF1
CDT1ENSG00000167513.4988.60380673.837400.552904.769403.61200K562BOP1
CDT1ENSG00000167513.41715.926201061.008600.693502.245601.31360K562CCAR1
CDT1ENSG00000167513.41316.60800726.694700.857304.019302.46210K562CIRBP
CDT1ENSG00000167513.41011.64000716.459300.497604.945503.90350K562CPSF6
CDT1ENSG00000167513.41910.56970558.049701.7754011.260708.95280K562CSTF2
CDT1ENSG00000167513.43396.928502300.400400.562202.507101.35770K562DDX21
CDT1ENSG00000167513.4994.64550644.825900.625202.735301.42390K562DDX27
CDT1ENSG00000167513.41736.762102515.97570-0.534703.756403.01340K562DDX47
CDT1ENSG00000167513.41316.57760644.479701.030503.959402.85290K562EFTUD2
CDT1ENSG00000167513.41978.522501305.189000.600104.949004.02700K562EIF2S2
CDT1ENSG00000167513.42929.568302192.418900.418106.773704.83930K562EIF4B
CDT1ENSG00000167513.42651.206001647.427600.6863010.410607.96730K562EXOSC5
CDT1ENSG00000167513.41721.265301139.461200.595006.592805.24180K562FIP1L1
CDT1ENSG00000167513.4568.12950729.02520-0.359702.170501.40970K562FMR1
CDT1ENSG00000167513.41376.993702531.73220-0.8786017.4574016.05110K562FXR1
CDT1ENSG00000167513.478.64680329.16520-2.065406.725505.51790K562G3BP2
CDT1ENSG00000167513.4940.00090684.023800.458503.875502.94320K562GPKOW
CDT1ENSG00000167513.45172.954702877.682600.8460018.3338016.14310K562HNRNPU
CDT1ENSG00000167513.42347.63570678.525301.790602.983501.90610K562IGF2BP2
CDT1ENSG00000167513.41366.89560689.950700.986209.788107.41260K562IGF2BP3
CDT1ENSG00000167513.41486.72390712.605101.0609021.7153019.18520K562MAGOH
CDT1ENSG00000167513.46877.196804670.395000.558206.989204.96870K562MAK16
CDT1ENSG00000167513.41249.98040711.083700.813704.664903.43550K562MATR3
CDT1ENSG00000167513.47434.222105465.337000.443803.999102.87200K562MBNL1
CDT1ENSG00000167513.4958.79310667.691400.521904.980603.78530K562METAP2
CDT1ENSG00000167513.41481.260802430.83950-0.714604.041502.53730K562NCBP2
CDT1ENSG00000167513.41607.01060636.376101.336304.751502.92060K562NONO
CDT1ENSG00000167513.44188.814002954.178900.5037020.9955019.22300K562NSUN2
CDT1ENSG00000167513.43992.715802397.699900.735604.064402.80530K562PABPN1
CDT1ENSG00000167513.41547.17890696.804501.1507012.9762010.17110K562PCBP1
CDT1ENSG00000167513.42181.749401293.698500.753904.131503.10280K562PPIG
CDT1ENSG00000167513.44776.420202851.531500.744103.688701.92390K562PPP1R8
CDT1ENSG00000167513.41081.38550692.377800.643102.254101.64570K562PTBP1
CDT1ENSG00000167513.45934.722004558.504000.380502.819702.27240K562PUS1
CDT1ENSG00000167513.46430.321504442.338000.533505.237804.44430K562RBM15
CDT1ENSG00000167513.41112.14170663.635400.744808.935407.28800K562RBM22
CDT1ENSG00000167513.4698.113201474.59390-1.078804.000402.07810K562RPS3A
CDT1ENSG00000167513.4494.57370341.797800.532902.458401.65430K562SF3B4
CDT1ENSG00000167513.44361.859202674.680300.705503.376501.88240K562SFPQ
CDT1ENSG00000167513.42617.859201547.061000.758804.373902.14990K562SMN1
CDT1ENSG00000167513.4249.75250425.23780-0.767804.984402.68620K562SND1
CDT1ENSG00000167513.41342.70020626.799001.099005.210102.89550K562SRP68
CDT1ENSG00000167513.41769.55530678.817001.3822038.4383035.87270K562SRSF1
CDT1ENSG00000167513.42788.991201310.485301.0895016.9716014.25080K562SRSF4
CDT1ENSG00000167513.41729.95840641.229901.4317034.3489030.58330K562SRSF5
CDT1ENSG00000167513.41060.066601612.23640-0.604903.148202.27250K562SYNCRIP
CDT1ENSG00000167513.42315.16830686.886501.7529013.4199011.64800K562TARDBP
CDT1ENSG00000167513.42080.80720662.611301.650808.757907.18690K562TIA1
CDT1ENSG00000167513.41971.86460650.504101.599807.851705.75990K562TRA2A
CDT1ENSG00000167513.44983.531203703.514200.428203.574902.12200K562TROVE2
CDT1ENSG00000167513.41250.31250642.281000.960902.374701.43760K562UCHL5
CDT1ENSG00000167513.43940.068603132.381400.330906.650905.59090K562UPF1
CDT1ENSG00000167513.41799.039502787.20730-0.631607.747206.39820K562WDR43
CDT1ENSG00000167513.41672.55070654.588201.353303.801302.30130K562XRN2
CDT1ENSG00000167513.41835.138902963.94400-0.691603.189901.44680K562YTHDC2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CDT1 is not available on ENCORE database.





1 RBPs can affect the splicing of CDT1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSCDT1ENSG00000167513.4chr16+8887343788873611888734588887361188872856888730820.056000.000000.00002longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CDT1 is not avaliable on ENCORE database.