LRRC61

General Information

Gene Name       : LRRC61
Gene ID             : ENSG00000127399.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LRRC61)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LRRC61ENSG00000127399.142.264.013.13ENCSR000AEF
HepG2LRRC61ENSG00000127399.1430.088.2319.16ENCSR985KAT
K562LRRC61ENSG00000127399.1425.7312.3919.06ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LRRC61 is not avaliable on ENCORE database.



Proteins bound to RNA
  • LRRC61 RNA is bound by 34 proteins.  







eCLIP assay for LRRC61 is not avaliable on ENCORE database.





34 proteins are bound to LRRC61 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr7150034791150034896+3'-UTR4.8545410.29151K562IGF2BP2
chr7150034734150034886+3'-UTR4.477087.53622K562PCBP1
chr7150035140150035220+3'-UTR3.662397.95735HepG2PCBP2
chr7150033948150033978+3'-UTR,CDS3.330784.47973K562YBX3
chr7150034853150034986+3'-UTR4.1069127.72960K562PABPC4
chr7150034812150034923+3'-UTR3.5791912.24229HepG2DDX55
chr7150034798150034857+3'-UTR3.266395.65251HepG2LARP4
chr7150034857150034937+3'-UTR3.108776.01570HepG2LARP4
chr7150034896150034949+3'-UTR3.458464.54145K562DDX6
chr7150023098150023106+5'-UTR,intron-Distal,intron-Proximal5.2930614.81877K562AQR
chr7150020433150020462+5'-UTR,intron-Distal4.285203.86664K562DDX3X
chr7150023000150023107+5'-UTR,intron-Distal,intron-Proximal3.767805.42118K562GRWD1
chr7150020608150020645+5'-UTR,intron-Distal3.606573.24636K562DDX3X
chr7150022995150023057+5'-UTR,intron-Distal4.233929.88402K562DDX3X
chr7150023082150023141+5'-UTR,intron-Distal,intron-Proximal3.880855.93840HepG2PRPF8
chr7150020479150020542+5'-UTR,intron-Distal3.688965.14244K562DROSHA
chr7150020480150020586+5'-UTR,intron-Distal4.7561666.97865HepG2DDX3X
chr7150020614150020759+5'-UTR,intron-Distal,intron-Proximal3.264849.25476HepG2PRPF8
chr7150020434150020480+5'-UTR,intron-Distal5.0217114.54204HepG2DDX3X
chr7150020586150020650+5'-UTR,intron-Distal,intron-Proximal5.7586852.98763HepG2DDX3X
chr7150022937150023033+5'-UTR,intron-Distal3.670274.41784HepG2GRWD1
chr7150020487150020560+5'-UTR,intron-Distal3.849156.09067HepG2NCBP2
chr7150034065150034116+CDS5.0649211.72256HepG2DDX3X
chr7150028094150028141+CDS,intron-Distal3.6655610.25633K562RBM15
chr7150027316150027385+5'-UTR,intron-Distal3.5471315.58366K562RBM15
chr7150026928150026955+5'-UTR,intron-Distal3.290767.63771K562RBM15
chr7150021992150022079+intron-Distal3.953843.53723HepG2PTBP1
chr7150026924150026969+5'-UTR,intron-Distal5.370176.69401K562DDX3X
chr7150027424150027438+5'-UTR,intron-Distal3.434663.99763K562SLTM
chr7150027131150027173+5'-UTR,intron-Distal5.7028112.85380K562RBM15
chr7150027847150027903+CDS,intron-Distal5.0804215.75859K562RBM15
chr7150026959150027048+5'-UTR,intron-Distal3.7759322.42161K562RBM15
chr7150028878150028942+3'-UTR,intron-Distal4.545379.43510K562UPF1
chr7150029756150029793+3'-UTR,intron-Distal4.178533.31904K562IGF2BP1
chr7150028634150028684+3'-UTR,intron-Distal3.8688613.40708K562TIA1
chr7150026581150026616+intron-Distal3.047137.27613K562XRN2
chr7150030111150030175+intron-Distal3.849064.59145HepG2XPO5
chr7150023132150023141+intron-Distal,intron-Proximal4.979563.88132K562RBM22
chr7150029709150029756+3'-UTR,intron-Distal3.524113.78871K562IGF2BP1
chr7150020688150020765+intron-Distal,intron-Proximal3.888706.62272HepG2EFTUD2
chr7150026559150026586+intron-Distal4.148423.71984K562METAP2
chr7150027457150027498+5'-UTR,CDS,intron-Distal4.244753.03355K562METAP2
chr7150026651150026721+intron-Distal4.301333.79154K562FUS
chr7150026950150027002+5'-UTR,intron-Distal3.489964.07500HepG2SLTM
chr7150027173150027210+5'-UTR,intron-Distal5.548339.68097K562RBM15
chr7150027702150027712+CDS,intron-Distal3.919638.27517K562RBM15
chr7150025841150025890+intron-Distal3.223059.11886K562RBM15
chr7150029494150029618+3'-UTR,intron-Distal3.1024715.79748K562UPF1
chr7150020649150020655+intron-Distal,intron-Proximal5.559498.34710K562AQR
chr7150028085150028135+CDS,intron-Distal3.836963.84718K562METAP2
chr7150028583150028598+3'-UTR,intron-Distal5.6460914.24972K562TIA1
chr7150023141150023201+intron-Distal,intron-Proximal4.113335.25794K562RBM22
chr7150027634150027675+CDS,intron-Distal3.8790015.83923K562RBM15
chr7150027238150027297+5'-UTR,intron-Distal4.6421027.49210K562RBM15
chr7150028593150028667+3'-UTR,intron-Distal3.072314.37706K562HNRNPC
chr7150026915150026925+intron-Distal3.8840812.46836K562LIN28B
chr7150027905150027970+CDS,intron-Distal3.553858.34235K562RBM15
chr7150026937150027009+5'-UTR,intron-Distal4.2695114.15498K562LIN28B
chr7150029929150030050+intron-Distal3.480664.92762HepG2CSTF2T
chr7150023142150023213+intron-Distal,intron-Proximal3.3138015.59865K562AQR
chr7150028578150028666+3'-UTR,intron-Distal3.208738.95865K562UPF1
chr7150021199150021281+intron-Distal4.654866.11515K562PTBP1
chr7150027412150027473+5'-UTR,intron-Distal3.9652212.03308K562RBM15
chr7150028804150028908+3'-UTR,intron-Distal3.197224.89654K562FTO
chr7150020858150020931+intron-Distal4.128813.16986HepG2QKI
chr7150028872150028947+3'-UTR,intron-Distal5.274747.20578K562ILF3
chr7150029100150029199+3'-UTR,intron-Distal4.076113.98468HepG2ILF3
chr7150029378150029493+3'-UTR,intron-Distal3.2939514.04327K562UPF1
chr7150027712150027791+CDS,intron-Distal4.8605725.56828K562RBM15
chr7150020652150020753+intron-Distal,intron-Proximal3.599926.74060K562PRPF8
chr7150027056150027102+5'-UTR,intron-Distal3.924139.54304K562RBM15
chr7150026555150026581+intron-Distal3.506879.90763K562XRN2
chr7150028598150028634+3'-UTR,intron-Distal5.2357831.33075K562TIA1
chr7150026926150026986+5'-UTR,intron-Distal3.201505.08552K562GEMIN5
chr7150023106150023142+intron-Distal,intron-Proximal5.8176422.31003K562AQR
chr7150026281150026369+intron-Distal3.655267.03354K562DDX3X
chr7150020669150020729+intron-Distal,intron-Proximal3.887457.39116HepG2RBM22
chr7150027593150027634+CDS,intron-Distal3.407127.69141K562RBM15
chr7150028797150028878+3'-UTR,intron-Distal3.6848610.72506K562UPF1
chr7150026925150027029+5'-UTR,intron-Distal3.8775011.30933K562UPF1
chr7150027916150027984+CDS,intron-Distal4.388076.20747HepG2SLTM
chr7150027499150027558+CDS,intron-Distal5.0712913.84893K562RBM15
chr7150029296150029470+3'-UTR,intron-Distal3.086616.98172K562FUS
chr7150020655150020693+intron-Distal,intron-Proximal3.658829.40811K562AQR
chr7150026728150026756+intron-Distal3.572835.32141K562UPF1
chr7150027595150027663+CDS,intron-Distal3.294768.46624K562GEMIN5
chr7150026165150026206+intron-Distal3.148655.03702K562DDX3X
chr7150028681150028733+3'-UTR,intron-Distal4.6908116.79649K562PUM2
chr7150020302150020343+intron-Proximal4.092934.98250K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LRRC61 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LRRC61 is not available on ENCORE database.

  • 114 RBPs can affect the levels of LRRC61.  








The Knockdown/knockout RNA-Seq assay for LRRC61 is not available on ENCORE database.





114 RBPs can affect the gene expression of LRRC61 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LRRC61ENSG00000127399.10767.40130956.62110-0.318002.848602.15400HepG2AUH
LRRC61ENSG00000127399.10169.16290351.29140-1.054304.326303.38720HepG2CALR
LRRC61ENSG00000127399.10345.23200604.08650-0.807202.058901.38500HepG2CIRBP
LRRC61ENSG00000127399.10488.62300248.480100.975506.073904.93980HepG2CNOT7
LRRC61ENSG00000127399.10481.35630353.982800.443303.588302.76380HepG2DAZAP1
LRRC61ENSG00000127399.10617.39060470.739900.391203.869702.90330HepG2DDX19B
LRRC61ENSG00000127399.10311.98330604.23400-0.953604.897303.61070HepG2DDX59
LRRC61ENSG00000127399.10373.46080212.307500.814702.882902.16810HepG2DNAJC21
LRRC61ENSG00000127399.10375.06670210.400100.833907.555106.54960HepG2DNAJC2
LRRC61ENSG00000127399.10229.41010559.44770-1.2861017.8907015.98580HepG2FUBP3
LRRC61ENSG00000127399.10418.81910210.406600.993005.603803.58480HepG2HNRNPA0
LRRC61ENSG00000127399.10463.77310322.456700.524204.145103.33280HepG2HNRNPL
LRRC61ENSG00000127399.10325.54100575.57930-0.822206.807605.87050HepG2HNRNPLL
LRRC61ENSG00000127399.10335.85920236.828600.503903.335402.67500HepG2HNRNPU
LRRC61ENSG00000127399.10409.32290237.059600.787905.122903.43130HepG2KHDRBS1
LRRC61ENSG00000127399.10357.13530587.10320-0.717103.782002.63740HepG2MTPAP
LRRC61ENSG00000127399.10270.98890428.10750-0.659703.219901.90710HepG2NAA15
LRRC61ENSG00000127399.10588.51890351.007600.745502.114401.44580HepG2NOL12
LRRC61ENSG00000127399.10502.94900189.695501.4066011.380008.42360HepG2NOLC1
LRRC61ENSG00000127399.10317.41200621.25320-0.968802.598501.89660HepG2PABPC4
LRRC61ENSG00000127399.10287.81590190.329800.596503.355601.99670HepG2PKM
LRRC61ENSG00000127399.10331.11530211.234100.648403.131602.35180HepG2PPIL4
LRRC61ENSG00000127399.10267.52350436.74810-0.707106.653605.51360HepG2PRPF4
LRRC61ENSG00000127399.10434.96130335.062400.376401.950601.43780HepG2PUF60
LRRC61ENSG00000127399.10702.96380355.677600.9828019.2145017.93680HepG2PUM1
LRRC61ENSG00000127399.10421.21720518.44640-0.299602.017601.47260HepG2PUS1
LRRC61ENSG00000127399.10767.46230560.505500.453303.942202.93950HepG2RBM15
LRRC61ENSG00000127399.10659.76380918.01570-0.476605.034704.38840HepG2RBM22
LRRC61ENSG00000127399.10597.40030302.918800.979702.415701.49560HepG2RBM27
LRRC61ENSG00000127399.10400.82970223.975500.839505.591604.75220HepG2RPS19
LRRC61ENSG00000127399.10430.04350249.793100.783604.786103.73440HepG2RPS3A
LRRC61ENSG00000127399.10348.39180210.912700.724004.546903.75430HepG2SAFB2
LRRC61ENSG00000127399.10400.03890235.215900.766103.407201.96380HepG2SART3
LRRC61ENSG00000127399.10332.67850492.39740-0.565702.865602.17930HepG2SF3A3
LRRC61ENSG00000127399.10290.79650569.68670-0.9702010.221208.94200HepG2SF3B1
LRRC61ENSG00000127399.10535.52200648.67320-0.276501.848001.34850HepG2SF3B4
LRRC61ENSG00000127399.10434.03690321.260500.434002.600201.91780HepG2SLBP
LRRC61ENSG00000127399.10356.88300245.970700.536903.982503.23290HepG2SMN1
LRRC61ENSG00000127399.10404.05840225.288900.842703.461602.37410HepG2SMNDC1
LRRC61ENSG00000127399.10391.96210633.88470-0.693502.747301.96920HepG2SNRNP70
LRRC61ENSG00000127399.10819.303401036.85560-0.339703.908603.34330HepG2SRFBP1
LRRC61ENSG00000127399.10340.88310677.08450-0.9901015.3441014.42280HepG2SRSF1
LRRC61ENSG00000127399.10606.26210330.818200.8738012.2671011.07560HepG2SRSF5
LRRC61ENSG00000127399.10375.85160550.85300-0.551505.682404.94120HepG2SRSF9
LRRC61ENSG00000127399.10655.46300900.21990-0.457805.701805.01660HepG2SSB
LRRC61ENSG00000127399.10584.75010376.237500.636107.349706.41730HepG2SUCLG1
LRRC61ENSG00000127399.10267.42850608.61800-1.1864018.2328016.97600HepG2TAF15
LRRC61ENSG00000127399.10337.74740559.20730-0.727405.013303.89760HepG2TIA1
LRRC61ENSG00000127399.10300.57630230.163900.385001.765101.34690HepG2TIAL1
LRRC61ENSG00000127399.10371.40270232.177800.677705.924305.15470HepG2TRIM56
LRRC61ENSG00000127399.10613.51980327.332100.906302.720901.85520HepG2TUFM
LRRC61ENSG00000127399.10242.18970538.92940-1.154005.929505.02710HepG2U2AF1
LRRC61ENSG00000127399.10515.34470346.469500.572702.263201.51090HepG2UBE2L3
LRRC61ENSG00000127399.10562.84370436.682200.366102.943502.22670HepG2UPF1
LRRC61ENSG00000127399.10238.06520480.26540-1.0125014.9046013.88590HepG2ZNF622
LRRC61ENSG00000127399.10240.51550535.08750-1.1536012.057909.65370K562AARS
LRRC61ENSG00000127399.101340.59150562.671301.252408.054105.19880K562ADAR
LRRC61ENSG00000127399.101289.79580903.537100.513405.697804.92970K562AGGF1
LRRC61ENSG00000127399.10823.019601227.71960-0.577004.732103.04320K562APOBEC3C
LRRC61ENSG00000127399.10687.21280986.53350-0.521603.157502.17840K562ATP5C1
LRRC61ENSG00000127399.10958.14900627.569300.610402.786201.47120K562BCCIP
LRRC61ENSG00000127399.101004.51300606.402000.7280012.9681010.84830K562BCLAF1
LRRC61ENSG00000127399.101138.80640693.989200.714407.748306.25900K562BOP1
LRRC61ENSG00000127399.101638.74620858.719400.932206.902105.17140K562CNOT7
LRRC61ENSG00000127399.101913.786801081.497000.8233011.065108.86720K562CPEB4
LRRC61ENSG00000127399.101095.83830737.845700.570506.672505.44810K562CPSF6
LRRC61ENSG00000127399.10980.04500460.046201.0910010.778408.52420K562CSTF2
LRRC61ENSG00000127399.101894.466701315.077300.526509.471207.21840K562DDX21
LRRC61ENSG00000127399.101091.91060808.401900.433604.364603.01340K562DDX3X
LRRC61ENSG00000127399.10775.464301119.05930-0.529208.160907.11920K562DDX47
LRRC61ENSG00000127399.101071.11750592.539900.854003.057601.64490K562DNAJC21
LRRC61ENSG00000127399.10546.88140844.61660-0.627104.641503.57930K562EIF4A3
LRRC61ENSG00000127399.101691.80500783.992101.1096012.7325010.10810K562EXOSC5
LRRC61ENSG00000127399.101023.74380692.682900.563502.404501.61440K562FIP1L1
LRRC61ENSG00000127399.101175.57370750.864300.646606.224004.92700K562FMR1
LRRC61ENSG00000127399.101174.94950636.478900.884306.513205.05170K562FTO
LRRC61ENSG00000127399.10269.92100878.37190-1.7023028.8100026.99200K562FXR1
LRRC61ENSG00000127399.10349.43800508.32060-0.540702.931502.20110K562G3BP2
LRRC61ENSG00000127399.101466.875401087.996200.431005.515503.92940K562GLRX3
LRRC61ENSG00000127399.10903.76330704.410000.359402.542301.77880K562GPKOW
LRRC61ENSG00000127399.102253.51360912.355301.3044021.8217019.58760K562GRSF1
LRRC61ENSG00000127399.10863.47200508.802700.762908.791805.51180K562GRWD1
LRRC61ENSG00000127399.101313.218101064.121700.303302.558201.52440K562HNRNPA1
LRRC61ENSG00000127399.101475.37170803.960700.875803.055701.39930K562HNRNPAB
LRRC61ENSG00000127399.10860.28550585.170700.555905.239104.44190K562HNRNPC
LRRC61ENSG00000127399.10749.16410522.700200.519204.327802.86130K562HNRNPF
LRRC61ENSG00000127399.10356.90740494.83990-0.471402.715701.49730K562HNRNPK
LRRC61ENSG00000127399.101512.881501178.484700.360304.065302.97390K562HNRNPU
LRRC61ENSG00000127399.10794.81490504.035200.657007.001004.97230K562IGF2BP3
LRRC61ENSG00000127399.10420.41750567.08560-0.431702.872901.45570K562LARP7
LRRC61ENSG00000127399.10394.05420519.66240-0.399202.600201.70770K562MATR3
LRRC61ENSG00000127399.101126.21970687.604300.711709.115307.45190K562METAP2
LRRC61ENSG00000127399.101983.906201483.073300.419702.385901.34060K562MSI2
LRRC61ENSG00000127399.102134.422601143.877700.8998030.3098028.10850K562MTPAP
LRRC61ENSG00000127399.10481.34500783.42530-0.702703.033902.10220K562NAA15
LRRC61ENSG00000127399.102712.516901270.998301.0936063.7475061.01160K562NSUN2
LRRC61ENSG00000127399.10894.11600555.583600.686402.810401.81200K562PABPN1
LRRC61ENSG00000127399.101396.30760786.512400.828005.410404.20180K562PPIG
LRRC61ENSG00000127399.10199.70080527.26600-1.400704.951703.95030K562PRPF8
LRRC61ENSG00000127399.10832.30950524.706400.665505.310004.00260K562PSIP1
LRRC61ENSG00000127399.10271.33150505.93460-0.8989010.300509.07610K562PTBP1
LRRC61ENSG00000127399.10925.788101518.12150-0.713504.696003.63650K562PUF60
LRRC61ENSG00000127399.102558.206101582.123600.693204.531603.29440K562PUM2
LRRC61ENSG00000127399.10553.33850932.25050-0.752605.271104.55260K562PUS1
LRRC61ENSG00000127399.10319.95500485.07270-0.600302.289501.52960K562RBM22
LRRC61ENSG00000127399.10617.35750478.917000.366202.408401.48750K562RCC2
LRRC61ENSG00000127399.10288.23970536.86980-0.897302.950102.10570K562RPS19
LRRC61ENSG00000127399.10481.31710787.29210-0.709906.048104.49530K562RPS3
LRRC61ENSG00000127399.10336.01190681.76090-1.020802.865001.76340K562SAFB
LRRC61ENSG00000127399.102343.149201254.080300.9017011.6149010.04110K562SF3A3
LRRC61ENSG00000127399.10344.09710528.21740-0.618305.833404.55960K562SF3B4
LRRC61ENSG00000127399.101004.17850606.740600.726802.925401.62490K562SLBP
LRRC61ENSG00000127399.10606.61100453.980800.418002.554001.58040K562SRFBP1
LRRC61ENSG00000127399.10898.83030526.788400.770703.316001.49340K562SRP68
LRRC61ENSG00000127399.101098.627401284.82600-0.225902.328701.46140K562SRPK2
LRRC61ENSG00000127399.101187.43360759.961600.643704.854203.39880K562SRSF4
LRRC61ENSG00000127399.101528.792601173.577800.381404.875503.30440K562SRSF7
LRRC61ENSG00000127399.101485.43510765.771900.955804.603702.48470K562STIP1
LRRC61ENSG00000127399.10354.62760767.25620-1.113403.466102.54790K562SYNCRIP
LRRC61ENSG00000127399.10685.09060484.199200.500604.240403.19490K562TIA1
LRRC61ENSG00000127399.101043.87820504.656701.0485014.0007011.78060K562TIAL1
LRRC61ENSG00000127399.10655.99330475.204400.465003.323202.10640K562TRA2A
LRRC61ENSG00000127399.10908.72670536.344900.760602.583101.67560K562TRIM56
LRRC61ENSG00000127399.101257.45000809.611700.635103.139701.64320K562TRIP6
LRRC61ENSG00000127399.10268.73250508.60550-0.920404.619903.58820K562U2AF2
LRRC61ENSG00000127399.10920.62160540.099800.769305.652904.14610K562UCHL5
LRRC61ENSG00000127399.102426.360001347.662600.8482018.0252016.36730K562UPF1
LRRC61ENSG00000127399.102363.422801153.158501.0352025.3361022.82570K562WDR3
LRRC61ENSG00000127399.10814.153701199.10890-0.5586010.298308.78380K562WDR43
LRRC61ENSG00000127399.10971.24670550.268900.819605.247303.38200K562XRN2
LRRC61ENSG00000127399.101992.927301086.302400.875402.628701.79160K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LRRC61 is not available on ENCORE database.






No RBPs affect the alternative splcing events of LRRC61 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for LRRC61 is not avaliable on ENCORE database.