HLF

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	HLF	ENSG00000108924.13	0.00	0.03	0.01	ENCSR000AEF
HepG2	HLF	ENSG00000108924.13	143.68	141.68	142.68	ENCSR985KAT
K562	HLF	ENSG00000108924.13	0.06	0.06	0.06	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for HLF is not avaliable on ENCORE database.

Proteins bound to RNA

HLF RNA is bound by 53 proteins.

eCLIP assay for HLF is not avaliable on ENCORE database.

53 proteins are bound to HLF RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	53399332	53399479	+	3'-UTR	3.62026	51.20226	HepG2	FUBP3
chr17	53399267	53399320	+	3'-UTR	4.35763	3.03253	HepG2	TIA1
chr17	53398120	53398194	+	3'-UTR,CDS	3.72281	14.52285	HepG2	SRSF1
chr17	53400915	53400918	+	3'-UTR	6.33525	35.61728	HepG2	CSTF2
chr17	53399486	53399509	+	3'-UTR	3.65058	18.39098	HepG2	FUBP3
chr17	53398571	53398638	+	3'-UTR	3.30071	7.23655	HepG2	DDX6
chr17	53401502	53401561	+	3'-UTR	3.89095	4.04453	HepG2	IGF2BP3
chr17	53392803	53392916	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.90053	22.40911	HepG2	PRPF8
chr17	53399800	53399836	+	3'-UTR	3.09028	3.53124	HepG2	FUBP3
chr17	53400898	53400915	+	3'-UTR	4.92614	25.92919	HepG2	CSTF2T
chr17	53400179	53400298	+	3'-UTR	3.26683	25.61887	HepG2	FUBP3
chr17	53401724	53401751	+	3'-UTR	4.39931	5.59872	HepG2	IGF2BP1
chr17	53400918	53400946	+	3'-UTR	6.40812	36.82421	HepG2	CSTF2
chr17	53399406	53399460	+	3'-UTR	3.50345	3.08064	HepG2	TIA1
chr17	53402376	53402396	+	3'-UTR	4.13624	6.03781	HepG2	FUBP3
chr17	53400355	53400422	+	3'-UTR	5.33531	9.01569	HepG2	CSTF2
chr17	53400946	53400952	+	3'-UTR	3.41651	5.39744	HepG2	CSTF2
chr17	53400894	53400915	+	3'-UTR,polyA_site	6.32039	35.20155	HepG2	CSTF2
chr17	53400977	53401060	+	3'-UTR	3.59916	10.24885	HepG2	IGF2BP1
chr17	53398598	53398640	+	3'-UTR	4.10360	4.24069	HepG2	IGF2BP3
chr17	53400153	53400201	+	3'-UTR	4.36541	10.28372	HepG2	IGF2BP3
chr17	53400918	53400923	+	3'-UTR	4.70987	25.39479	HepG2	CSTF2T
chr17	53402250	53402279	+	3'-UTR	5.28213	20.87465	HepG2	IGF2BP1
chr17	53401863	53401912	+	3'-UTR	4.31070	5.44143	HepG2	IGF2BP3
chr17	53400923	53400943	+	3'-UTR	4.88877	25.27929	HepG2	CSTF2T
chr17	53402279	53402297	+	3'-UTR	5.19870	18.80586	HepG2	IGF2BP1
chr17	53399215	53399263	+	3'-UTR	3.37424	19.81057	HepG2	PCBP2
chr17	53401080	53401106	+	3'-UTR	4.23553	3.31982	HepG2	IGF2BP1
chr17	53400153	53400207	+	3'-UTR	3.21777	9.69851	HepG2	IGF2BP1
chr17	53400915	53400918	+	3'-UTR	4.92614	25.92919	HepG2	CSTF2T
chr17	53398107	53398203	+	3'-UTR,CDS	3.09393	12.14208	HepG2	PPIG
chr17	53400115	53400153	+	3'-UTR	3.76149	5.69993	HepG2	IGF2BP3
chr17	53402297	53402311	+	3'-UTR	4.96722	15.62466	HepG2	IGF2BP1
chr17	53397982	53398070	+	3'-UTR,CDS,intron-Proximal	3.28867	21.09144	HepG2	U2AF2
chr17	53398411	53398477	+	3'-UTR	3.52801	8.83002	HepG2	IGF2BP1
chr17	53398102	53398120	+	3'-UTR,CDS	3.00113	4.96230	HepG2	SRSF1
chr17	53399086	53399142	+	3'-UTR	3.99584	4.43609	HepG2	IGF2BP3
chr17	53400399	53400425	+	3'-UTR	3.07674	3.15019	HepG2	IGF2BP1
chr17	53342427	53342493	+	5'-UTR	3.93368	13.07890	HepG2	NCBP2
chr17	53342422	53342508	+	5'-UTR	3.10962	73.10914	HepG2	DDX3X
chr17	53343220	53343288	+	5'-UTR,intron-Distal,intron-Proximal	3.05742	6.65734	HepG2	PRPF4
chr17	53345222	53345348	+	5'-UTR,CDS	3.72280	41.80947	HepG2	RBM15
chr17	53343598	53343648	+	5'-UTR,intron-Distal	3.11865	6.64128	HepG2	NCBP2
chr17	53392527	53392617	+	CDS,intron-Proximal	4.56550	4.57682	HepG2	SF3B4
chr17	53392586	53392612	+	CDS,intron-Proximal	3.11879	3.47572	HepG2	IGF2BP3
chr17	53392562	53392612	+	CDS,intron-Proximal	3.35979	9.83200	HepG2	AQR
chr17	53350967	53351006	+	intron-Distal	3.03582	4.49736	HepG2	NKRF
chr17	53390422	53390508	+	intron-Distal	4.82686	47.74374	HepG2	XPO5
chr17	53357778	53357817	+	intron-Distal	3.39716	40.62293	HepG2	HNRNPM
chr17	53363683	53363732	+	intron-Distal	3.54142	24.57217	HepG2	PCBP2
chr17	53360656	53360684	+	intron-Distal	3.40015	7.27504	HepG2	HNRNPM
chr17	53364198	53364209	+	intron-Distal	3.21666	6.46712	HepG2	RBFOX2
chr17	53378379	53378424	+	intron-Distal	3.22335	24.52357	HepG2	SUGP2
chr17	53373005	53373028	+	intron-Distal	3.18988	9.77637	HepG2	CSTF2T
chr17	53355330	53355404	+	intron-Distal	3.61272	6.94724	HepG2	HNRNPL
chr17	53350023	53350067	+	intron-Distal	3.24084	8.66645	HepG2	HNRNPM
chr17	53343514	53343559	+	intron-Distal	3.33279	3.00221	HepG2	CSTF2T
chr17	53372607	53372632	+	intron-Distal	3.47091	8.33940	HepG2	CSTF2
chr17	53372368	53372378	+	intron-Distal	6.69558	64.82158	HepG2	CSTF2
chr17	53371716	53371795	+	intron-Distal	3.48507	10.51715	HepG2	CSTF2
chr17	53395180	53395247	+	intron-Distal	5.80111	28.20255	HepG2	RBFOX2
chr17	53347113	53347212	+	intron-Distal	3.65743	6.00124	HepG2	TIA1
chr17	53378596	53378651	+	intron-Distal	4.61480	10.60267	HepG2	QKI
chr17	53354653	53354750	+	intron-Distal	4.16737	9.51401	HepG2	FUBP3
chr17	53397921	53397988	+	intron-Distal,intron-Proximal	3.47513	17.50881	HepG2	SF3A3
chr17	53396245	53396311	+	intron-Distal	3.28083	6.70549	HepG2	HNRNPK
chr17	53374209	53374219	+	intron-Distal	3.67514	10.86562	HepG2	U2AF1
chr17	53354662	53354751	+	intron-Distal	3.25200	6.95711	HepG2	SRSF7
chr17	53354543	53354575	+	intron-Distal	3.42381	5.04671	HepG2	SFPQ
chr17	53358352	53358408	+	intron-Distal	3.57434	23.40819	HepG2	HNRNPM
chr17	53378178	53378282	+	intron-Distal	3.55134	34.49328	HepG2	SUGP2
chr17	53373000	53373061	+	intron-Distal	4.35993	21.61262	HepG2	CSTF2
chr17	53377718	53377816	+	intron-Distal	3.75003	69.65416	HepG2	SUGP2
chr17	53368980	53369025	+	intron-Distal	3.50150	13.72485	HepG2	HLTF
chr17	53363046	53363062	+	intron-Distal	3.50453	4.88067	HepG2	LIN28B
chr17	53348760	53348792	+	intron-Distal	3.36302	4.48600	HepG2	HNRNPU
chr17	53373824	53373858	+	intron-Distal	4.07523	4.10339	HepG2	CSTF2T
chr17	53349218	53349288	+	intron-Distal	3.33531	11.88509	HepG2	HNRNPK
chr17	53381982	53382031	+	intron-Distal	3.30590	4.63569	HepG2	RBFOX2
chr17	53391688	53391772	+	intron-Distal	4.30213	25.15993	HepG2	QKI
chr17	53349914	53350030	+	intron-Distal	3.07873	17.10871	HepG2	SFPQ
chr17	53360694	53360741	+	intron-Distal	4.38590	41.04550	HepG2	HNRNPM
chr17	53383947	53384023	+	intron-Distal	3.03453	3.19528	HepG2	KHSRP
chr17	53372866	53372897	+	intron-Distal	3.68351	11.02590	HepG2	CSTF2
chr17	53369025	53369055	+	intron-Distal	4.11890	13.15145	HepG2	HLTF
chr17	53377994	53378066	+	intron-Distal	3.11634	5.34045	HepG2	MATR3
chr17	53378107	53378174	+	intron-Distal	3.17486	9.03699	HepG2	MATR3
chr17	53377999	53378079	+	intron-Distal	3.55198	32.70609	HepG2	SUGP2
chr17	53360745	53360837	+	intron-Distal	5.11492	76.82402	HepG2	HNRNPM
chr17	53390686	53390751	+	intron-Distal	3.58928	6.07576	HepG2	IGF2BP1
chr17	53372430	53372462	+	intron-Distal	3.70938	10.80796	HepG2	CSTF2
chr17	53378505	53378573	+	intron-Distal	3.60163	23.54969	HepG2	SUGP2
chr17	53392385	53392480	+	intron-Distal	4.13778	32.09178	HepG2	XPO5
chr17	53397901	53397984	+	intron-Distal,intron-Proximal	3.24194	8.51443	HepG2	RBM5
chr17	53378696	53378737	+	intron-Distal	3.78846	6.47506	HepG2	SFPQ
chr17	53371462	53371554	+	intron-Distal	3.47387	15.01638	HepG2	CSTF2
chr17	53373208	53373258	+	intron-Distal	3.05988	7.38033	HepG2	CSTF2
chr17	53378587	53378647	+	intron-Distal	3.11430	8.07462	HepG2	SFPQ
chr17	53354619	53354698	+	intron-Distal	4.60077	8.40843	HepG2	PRPF4
chr17	53367797	53367854	+	intron-Distal	3.20977	3.81699	HepG2	KHSRP
chr17	53348716	53348760	+	intron-Distal	3.46199	4.95862	HepG2	HNRNPU
chr17	53368580	53368668	+	intron-Distal	3.73687	27.70483	HepG2	HLTF
chr17	53360580	53360642	+	intron-Distal	3.44406	27.13329	HepG2	HNRNPM
chr17	53372795	53372840	+	intron-Distal	3.40839	10.44731	HepG2	CSTF2
chr17	53354987	53355069	+	intron-Distal	3.23227	12.00295	HepG2	SFPQ
chr17	53384230	53384268	+	intron-Distal	5.98375	400.00000	HepG2	PTBP1
chr17	53369553	53369601	+	intron-Distal	3.77125	6.06296	HepG2	SAFB
chr17	53351702	53351717	+	intron-Distal	3.04385	3.97172	HepG2	QKI
chr17	53343385	53343403	+	intron-Distal	4.19255	6.56790	HepG2	FAM120A
chr17	53392943	53392956	+	intron-Distal	3.91754	3.81373	HepG2	DROSHA
chr17	53343015	53343095	+	intron-Distal,intron-Proximal	3.10468	3.52395	HepG2	HNRNPK
chr17	53365825	53365887	+	intron-Distal	3.33796	6.95922	HepG2	ILF3
chr17	53377820	53377883	+	intron-Distal	3.30077	15.69306	HepG2	SUGP2
chr17	53355309	53355405	+	intron-Distal	3.01438	9.08385	HepG2	PTBP1
chr17	53377926	53377994	+	intron-Distal	4.13211	34.80637	HepG2	SUGP2
chr17	53370677	53370702	+	intron-Distal	3.23526	5.36478	HepG2	CSTF2
chr17	53372213	53372270	+	intron-Distal	3.65881	10.25388	HepG2	CSTF2
chr17	53366208	53366271	+	intron-Distal,intron-Proximal	3.33227	3.30959	HepG2	AQR
chr17	53383876	53383962	+	intron-Distal	4.17424	4.33846	HepG2	IGF2BP1
chr17	53371716	53371768	+	intron-Distal	3.07460	16.65791	HepG2	HLTF
chr17	53354940	53355047	+	intron-Distal	3.23676	11.72948	HepG2	GTF2F1
chr17	53354633	53354719	+	intron-Distal	3.09135	5.66653	HepG2	NKRF
chr17	53354623	53354722	+	intron-Distal	4.45922	26.41247	HepG2	IGF2BP1
chr17	53390566	53390597	+	intron-Distal	4.99578	3.71151	HepG2	SRSF7
chr17	53354642	53354699	+	intron-Distal	3.87695	4.91329	HepG2	FASTKD2
chr17	53354618	53354662	+	intron-Distal	3.82065	3.87186	HepG2	SRSF7
chr17	53372368	53372413	+	intron-Distal	4.13979	4.43128	HepG2	TIA1
chr17	53373736	53373763	+	intron-Distal	3.32389	4.05586	HepG2	U2AF2
chr17	53372542	53372599	+	intron-Distal	3.74921	10.05503	HepG2	TAF15
chr17	53372392	53372421	+	intron-Distal	3.33761	12.47547	HepG2	CSTF2T
chr17	53369791	53369855	+	intron-Distal	4.05562	4.87318	HepG2	TIA1
chr17	53377906	53377926	+	intron-Distal	4.44973	16.35924	HepG2	SUGP2
chr17	53379879	53379959	+	intron-Distal	3.01111	13.40002	HepG2	PRPF4
chr17	53357995	53358016	+	intron-Distal	3.06196	8.48249	HepG2	HNRNPM
chr17	53360838	53360887	+	intron-Distal	3.72665	20.38097	HepG2	HNRNPM
chr17	53345486	53345549	+	intron-Distal,intron-Proximal	3.11959	9.19647	HepG2	AQR
chr17	53373443	53373479	+	intron-Distal	3.03952	4.14643	HepG2	KHSRP
chr17	53365696	53365817	+	intron-Distal	4.71772	17.81908	HepG2	ILF3
chr17	53363200	53363233	+	intron-Distal	3.49622	9.52820	HepG2	SUGP2
chr17	53371805	53371854	+	intron-Distal	3.23122	8.11035	HepG2	CSTF2
chr17	53372462	53372525	+	intron-Distal	3.18757	16.29406	HepG2	CSTF2
chr17	53372973	53373000	+	intron-Distal	3.92043	7.65563	HepG2	CSTF2
chr17	53349874	53349994	+	intron-Distal	3.06242	14.67072	HepG2	PRPF4
chr17	53372368	53372392	+	intron-Distal	3.62421	12.63110	HepG2	CSTF2T
chr17	53367729	53367784	+	intron-Distal	3.56691	7.38324	HepG2	CSTF2
chr17	53377495	53377563	+	intron-Distal	3.87925	20.02592	HepG2	SUGP2
chr17	53394341	53394395	+	intron-Distal	3.39390	4.07077	HepG2	HNRNPC
chr17	53374219	53374241	+	intron-Distal	3.77436	11.98536	HepG2	U2AF1
chr17	53368724	53368755	+	intron-Distal	3.46753	15.10286	HepG2	HLTF
chr17	53363477	53363530	+	intron-Distal	3.15237	4.07634	HepG2	YBX3
chr17	53378647	53378696	+	intron-Distal	4.35861	9.76056	HepG2	SFPQ
chr17	53372632	53372676	+	intron-Distal	3.68238	13.73735	HepG2	CSTF2
chr17	53369379	53369420	+	intron-Distal	4.01745	6.34623	HepG2	RBM22
chr17	53363732	53363766	+	intron-Distal	3.31606	5.92724	HepG2	MATR3
chr17	53369061	53369114	+	intron-Distal	3.18745	19.14539	HepG2	HLTF
chr17	53378066	53378107	+	intron-Distal	3.20933	7.15570	HepG2	MATR3
chr17	53393546	53393576	+	intron-Distal	4.74932	5.31925	HepG2	QKI
chr17	53371988	53372051	+	intron-Distal	3.24986	4.95235	HepG2	SRSF9
chr17	53389756	53389823	+	intron-Distal	3.17078	4.38902	HepG2	HNRNPL
chr17	53375781	53375792	+	intron-Distal	3.06546	7.98949	HepG2	SUGP2
chr17	53384268	53384281	+	intron-Distal	6.13283	49.15911	HepG2	PTBP1
chr17	53361383	53361409	+	intron-Distal,intron-Proximal	3.67857	9.52427	HepG2	HNRNPM
chr17	53350115	53350143	+	intron-Distal	4.36254	6.13321	HepG2	TIA1
chr17	53361282	53361338	+	intron-Distal,intron-Proximal	3.83702	3.80782	HepG2	HNRNPA1
chr17	53350475	53350555	+	intron-Distal	3.55658	62.13016	HepG2	XPO5
chr17	53372525	53372607	+	intron-Distal	3.96198	22.76155	HepG2	CSTF2
chr17	53381750	53381818	+	intron-Distal	4.06311	13.56056	HepG2	XPO5
chr17	53343523	53343565	+	intron-Distal	3.44466	3.66710	HepG2	GTF2F1
chr17	53384182	53384230	+	intron-Distal	5.36503	87.60693	HepG2	PTBP1
chr17	53395468	53395505	+	intron-Distal	4.24057	18.21680	HepG2	RBFOX2
chr17	53354776	53354820	+	intron-Distal	3.78124	5.09362	HepG2	FUS
chr17	53389879	53389957	+	intron-Distal	3.31700	11.23641	HepG2	QKI
chr17	53372537	53372595	+	intron-Distal	3.28624	11.04326	HepG2	CSTF2T
chr17	53372686	53372747	+	intron-Distal	4.06805	12.49803	HepG2	CSTF2
chr17	53397905	53397989	+	intron-Distal,intron-Proximal	4.09596	18.93048	HepG2	SF3B4
chr17	53384187	53384282	+	intron-Distal	3.69811	31.23085	HepG2	MATR3
chr17	53372315	53372340	+	intron-Distal	7.19030	39.61746	HepG2	CSTF2
chr17	53395443	53395468	+	intron-Distal	3.65887	10.67764	HepG2	RBFOX2
chr17	53378521	53378559	+	intron-Distal	3.31449	5.58751	HepG2	MATR3
chr17	53373434	53373499	+	intron-Distal	4.31413	13.69638	HepG2	CSTF2
chr17	53373389	53373409	+	intron-Distal	4.45442	5.84425	HepG2	CSTF2
chr17	53354619	53354760	+	intron-Distal	3.63272	25.87949	HepG2	KHSRP
chr17	53363718	53363732	+	intron-Distal	3.51813	8.66164	HepG2	MATR3
chr17	53354682	53354766	+	intron-Distal	3.65378	15.84866	HepG2	SFPQ
chr17	53377714	53377773	+	intron-Distal	3.70079	15.88442	HepG2	MATR3
chr17	53379853	53379951	+	intron-Distal	3.41011	9.14467	HepG2	GTF2F1
chr17	53371905	53371969	+	intron-Distal	3.52063	13.15338	HepG2	CSTF2
chr17	53355454	53355492	+	intron-Distal	3.07563	5.41351	HepG2	HNRNPU
chr17	53372002	53372035	+	intron-Distal	3.44837	6.65451	HepG2	CSTF2
chr17	53372847	53372855	+	intron-Distal	3.64690	10.60476	HepG2	CSTF2
chr17	53362614	53362636	+	intron-Distal	3.13467	3.47155	HepG2	FUS
chr17	53379137	53379205	+	intron-Distal	3.35413	9.56177	HepG2	HNRNPU
chr17	53372378	53372430	+	intron-Distal	5.20153	43.09462	HepG2	CSTF2
chr17	53372057	53372142	+	intron-Distal	3.22394	5.03405	HepG2	SRSF9
chr17	53378282	53378372	+	intron-Distal	3.14853	33.37901	HepG2	SUGP2
chr17	53378655	53378704	+	intron-Distal	3.07977	14.48286	HepG2	SUGP2
chr17	53354686	53354716	+	intron-Distal	4.43535	8.69336	HepG2	FUS
chr17	53384113	53384182	+	intron-Distal	5.13429	39.28943	HepG2	PTBP1
chr17	53356303	53356381	+	intron-Distal	4.03952	4.14688	HepG2	TRA2A
chr17	53377644	53377718	+	intron-Distal	3.15047	23.26655	HepG2	SUGP2
chr17	53372855	53372866	+	intron-Distal	3.98119	15.65460	HepG2	CSTF2
chr17	53378744	53378787	+	intron-Distal	3.44206	7.21600	HepG2	HNRNPM
chr17	53343525	53343548	+	intron-Distal	3.94614	5.72412	HepG2	FAM120A
chr17	53363813	53363898	+	intron-Distal	3.18361	14.54148	HepG2	MATR3
chr17	53368668	53368724	+	intron-Distal	4.08461	30.68265	HepG2	HLTF
chr17	53354658	53354714	+	intron-Distal	3.64645	13.00879	HepG2	PCBP2
chr17	53363062	53363128	+	intron-Distal	4.53618	12.75910	HepG2	LIN28B
chr17	53368670	53368761	+	intron-Distal	3.44290	10.51337	HepG2	SAFB
chr17	53358016	53358074	+	intron-Distal	4.24455	21.79339	HepG2	HNRNPM
chr17	53392481	53392529	+	intron-Distal,intron-Proximal	4.42052	15.89079	HepG2	SF3A3
chr17	53379843	53379879	+	intron-Distal	3.24653	7.12794	HepG2	PRPF4
chr17	53372939	53372973	+	intron-Distal	3.23109	7.92863	HepG2	CSTF2
chr17	53354621	53354740	+	intron-Distal	3.44646	14.36710	HepG2	DKC1
chr17	53373310	53373338	+	intron-Distal	4.12617	9.91077	HepG2	CSTF2
chr17	53375121	53375126	+	intron-Distal	3.33835	9.08140	HepG2	HNRNPC
chr17	53350101	53350115	+	intron-Distal	3.36254	5.07746	HepG2	TIA1
chr17	53371458	53371559	+	intron-Distal	3.27540	35.21762	HepG2	HLTF
chr17	53343386	53343458	+	intron-Distal	3.85229	11.80941	HepG2	GTF2F1
chr17	53355329	53355403	+	intron-Distal	3.27261	16.89901	HepG2	QKI
chr17	53369382	53369434	+	intron-Distal	3.24797	13.65521	HepG2	HLTF
chr17	53372340	53372368	+	intron-Distal	7.77018	63.32449	HepG2	CSTF2
chr17	53378599	53378627	+	intron-Distal	3.26838	10.66621	HepG2	SUGP2
chr17	53349904	53349981	+	intron-Distal	3.25566	10.72767	HepG2	GTF2F1
chr17	53343510	53343583	+	intron-Distal	4.99474	15.82560	HepG2	PRPF4
chr17	53354918	53354971	+	intron-Distal	3.28049	9.27003	HepG2	PRPF4
chr17	53354629	53354686	+	intron-Distal	3.13517	5.34663	HepG2	FUS
chr17	53372840	53372847	+	intron-Distal	3.52754	9.90306	HepG2	CSTF2
chr17	53379859	53379924	+	intron-Distal	3.90880	3.10582	HepG2	TIAL1
chr17	53393576	53393654	+	intron-Distal	4.17786	18.68869	HepG2	QKI
chr17	53373805	53373888	+	intron-Distal	3.57787	12.54091	HepG2	SFPQ
chr17	53354942	53355058	+	intron-Distal	4.74956	25.30808	HepG2	RBFOX2
chr17	53351482	53351553	+	intron-Distal	3.20405	6.87592	HepG2	QKI
chr17	53365160	53365227	+	intron-Distal	4.24972	27.59986	HepG2	HNRNPM
chr17	53354616	53354724	+	intron-Distal	3.09378	5.72610	HepG2	TIAL1
chr17	53363718	53363767	+	intron-Distal	3.01109	3.27712	HepG2	U2AF1
chr17	53373537	53373623	+	intron-Distal	3.38229	8.56393	HepG2	CSTF2
chr17	53375126	53375177	+	intron-Distal	3.62414	12.22126	HepG2	HNRNPC
chr17	53363642	53363684	+	intron-Distal	3.20509	6.87018	HepG2	PTBP1
chr17	53377568	53377616	+	intron-Distal	3.34337	6.20132	HepG2	MATR3
chr17	53363429	53363550	+	intron-Distal	3.01932	11.46866	HepG2	MATR3
chr17	53345457	53345486	+	intron-Proximal	3.28513	6.50749	HepG2	AQR
chr17	53392525	53392562	+	intron-Proximal	3.96254	6.49379	HepG2	AQR
chr17	53342975	53343028	+	intron-Proximal	4.61771	12.78199	HepG2	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for HLF is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for HLF is not available on ENCORE database.
134 RBPs can affect the levels of HLF.

The Knockdown/knockout RNA-Seq assay for HLF is not available on ENCORE database.

134 RBPs can affect the gene expression of HLF :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
HLF	ENSG00000108924.9	12496.54640	16550.93950	-0.40540	4.34900	3.18740	HepG2	ABCF1
HLF	ENSG00000108924.9	9326.17360	12715.93620	-0.44730	15.87760	14.67580	HepG2	ACO1
HLF	ENSG00000108924.9	7424.60250	9099.73850	-0.29350	2.46490	1.52380	HepG2	ADAR
HLF	ENSG00000108924.9	4834.19940	23891.00360	-2.30510	80.24480	78.03760	HepG2	AKAP1
HLF	ENSG00000108924.9	12216.59540	17705.16270	-0.53530	5.65940	4.19520	HepG2	AKAP8
HLF	ENSG00000108924.9	6487.39050	12775.94950	-0.97770	56.15360	53.47280	HepG2	AKAP8L
HLF	ENSG00000108924.9	12189.21220	14932.93470	-0.29290	3.23470	1.72430	HepG2	ATP5C1
HLF	ENSG00000108924.9	19520.68510	17362.03490	0.16900	2.47000	1.81440	HepG2	AUH
HLF	ENSG00000108924.9	5589.19900	7877.96360	-0.49520	4.21910	3.06130	HepG2	BCCIP
HLF	ENSG00000108924.9	8192.98890	12159.42700	-0.56960	12.71880	11.26400	HepG2	CALR
HLF	ENSG00000108924.9	10819.89940	16215.50060	-0.58370	5.43730	4.04870	HepG2	CCAR1
HLF	ENSG00000108924.9	7884.92520	18780.72900	-1.25210	33.57460	31.36250	HepG2	CIRBP
HLF	ENSG00000108924.9	11524.47450	12713.49770	-0.14170	2.40680	1.77840	HepG2	CKAP4
HLF	ENSG00000108924.9	5821.69500	4866.68170	0.25840	2.33360	1.33840	HepG2	CSTF2
HLF	ENSG00000108924.9	10297.92380	14456.78500	-0.48940	13.96740	12.73900	HepG2	CELF1
HLF	ENSG00000108924.9	14022.17510	15545.26800	-0.14880	2.81640	2.06850	HepG2	DAZAP1
HLF	ENSG00000108924.9	5156.00460	11220.72990	-1.12180	34.12690	32.15250	HepG2	DDX21
HLF	ENSG00000108924.9	9063.90400	10979.49160	-0.27660	3.24940	2.25780	HepG2	DDX24
HLF	ENSG00000108924.9	9137.50300	22885.63200	-1.32460	34.10550	32.17730	HepG2	DDX3X
HLF	ENSG00000108924.9	9250.58750	11424.16060	-0.30450	3.58220	2.04600	HepG2	DDX52
HLF	ENSG00000108924.9	4898.82000	7745.48580	-0.66090	7.44420	6.24690	HepG2	DDX55
HLF	ENSG00000108924.9	15064.99930	19659.56590	-0.38400	3.09890	2.44830	HepG2	DDX6
HLF	ENSG00000108924.9	9529.75160	12165.78920	-0.35230	8.51600	7.45780	HepG2	DKC1
HLF	ENSG00000108924.9	7554.25290	9082.06490	-0.26570	6.77930	5.82190	HepG2	DNAJC2
HLF	ENSG00000108924.9	7718.09570	13630.65580	-0.82050	15.55220	13.64510	HepG2	EEF2
HLF	ENSG00000108924.9	8663.53350	11363.40380	-0.39140	3.98050	2.64480	HepG2	EFTUD2
HLF	ENSG00000108924.9	7711.92710	18898.88560	-1.29310	33.00380	31.11460	HepG2	EIF2S1
HLF	ENSG00000108924.9	7261.12630	11065.18410	-0.60780	7.94910	6.49170	HepG2	EIF3D
HLF	ENSG00000108924.9	6749.81470	10595.59660	-0.65050	14.83810	12.74650	HepG2	EIF3G
HLF	ENSG00000108924.9	9062.57720	20885.32940	-1.20450	23.89810	22.06210	HepG2	EIF4A3
HLF	ENSG00000108924.9	12862.05120	20335.10600	-0.66090	6.28460	5.27900	HepG2	EIF4B
HLF	ENSG00000108924.9	21379.13450	15335.77970	0.47920	15.24250	13.59610	HepG2	EIF4G1
HLF	ENSG00000108924.9	11632.33340	14336.09610	-0.30150	3.08570	1.93560	HepG2	ESF1
HLF	ENSG00000108924.9	8882.77570	19933.67280	-1.16610	85.03200	82.61280	HepG2	ETF1
HLF	ENSG00000108924.9	9708.21440	12426.03020	-0.35610	4.62990	3.55420	HepG2	EWSR1
HLF	ENSG00000108924.9	7741.82250	9889.27090	-0.35320	5.12670	3.50060	HepG2	FAM120A
HLF	ENSG00000108924.9	10935.21730	16712.08140	-0.61190	7.98540	6.75320	HepG2	FIP1L1
HLF	ENSG00000108924.9	9599.68620	6447.19100	0.57420	7.34030	5.41390	HepG2	FKBP4
HLF	ENSG00000108924.9	8728.98910	14635.39580	-0.74560	7.30790	5.56040	HepG2	FUS
HLF	ENSG00000108924.9	11644.64960	21072.90840	-0.85570	15.67140	14.16440	HepG2	FXR1
HLF	ENSG00000108924.9	10475.17200	19547.95660	-0.90000	15.15780	13.66250	HepG2	G3BP1
HLF	ENSG00000108924.9	15414.29630	20752.99630	-0.42910	4.65440	3.48570	HepG2	G3BP2
HLF	ENSG00000108924.9	4640.54000	9852.15560	-1.08610	25.52520	23.20260	HepG2	GEMIN5
HLF	ENSG00000108924.9	7121.18440	11562.50610	-0.69930	6.76630	5.15820	HepG2	GNB2L1
HLF	ENSG00000108924.9	11114.47830	8361.64210	0.41050	3.65150	2.92490	HepG2	GPKOW
HLF	ENSG00000108924.9	9961.88710	15363.32950	-0.62500	5.12730	3.60710	HepG2	GRSF1
HLF	ENSG00000108924.9	14262.54500	12140.27600	0.23230	4.03510	2.86970	HepG2	HDGF
HLF	ENSG00000108924.9	9854.71190	14020.12190	-0.50860	2.87500	1.47240	HepG2	HLTF
HLF	ENSG00000108924.9	6959.92890	9250.79430	-0.41050	5.68720	4.80490	HepG2	HNRNPA1
HLF	ENSG00000108924.9	6449.94220	10289.78730	-0.67390	13.24850	11.83580	HepG2	HNRNPC
HLF	ENSG00000108924.9	12873.48190	9556.75430	0.42970	11.51100	10.18430	HepG2	HNRNPF
HLF	ENSG00000108924.9	14760.28580	19794.67450	-0.42340	5.21410	4.27820	HepG2	HNRNPK
HLF	ENSG00000108924.9	5860.02060	11529.52310	-0.97640	30.94430	28.47340	HepG2	HNRNPM
HLF	ENSG00000108924.9	7782.77370	10221.75820	-0.39330	10.81610	9.68410	HepG2	HNRNPU
HLF	ENSG00000108924.9	14515.59750	19282.82640	-0.40970	2.99900	1.71370	HepG2	HSPD1
HLF	ENSG00000108924.9	11823.22340	9410.64830	0.32920	4.27960	3.39620	HepG2	IGF2BP1
HLF	ENSG00000108924.9	12325.54500	19869.97970	-0.68890	10.58890	9.36050	HepG2	IGF2BP2
HLF	ENSG00000108924.9	11764.04280	18647.48500	-0.66460	2.91500	1.90590	HepG2	IGF2BP3
HLF	ENSG00000108924.9	7423.62890	10441.18960	-0.49210	23.55820	21.67110	HepG2	ILF2
HLF	ENSG00000108924.9	12808.31120	11624.16230	0.13990	2.41420	1.46130	HepG2	KIF1C
HLF	ENSG00000108924.9	10515.72590	17116.81650	-0.70290	7.76740	6.36370	HepG2	LARP4
HLF	ENSG00000108924.9	8798.76980	11325.43460	-0.36420	2.39020	1.34100	HepG2	LARP7
HLF	ENSG00000108924.9	10591.09330	21080.26750	-0.99300	19.67570	18.01160	HepG2	MAGOH
HLF	ENSG00000108924.9	15108.95740	21198.17210	-0.48850	4.84220	4.02610	HepG2	MATR3
HLF	ENSG00000108924.9	5230.93760	11580.80510	-1.14660	14.64500	12.39590	HepG2	METAP2
HLF	ENSG00000108924.9	7079.40970	13523.92580	-0.93380	28.64060	26.48880	HepG2	MSI2
HLF	ENSG00000108924.9	11028.97310	8139.03010	0.43830	2.60100	1.66520	HepG2	MTPAP
HLF	ENSG00000108924.9	9284.11100	21697.44350	-1.22470	28.04090	26.18150	HepG2	NCBP2
HLF	ENSG00000108924.9	11780.65780	18271.26620	-0.63320	5.51420	3.50440	HepG2	NKRF
HLF	ENSG00000108924.9	13495.12600	15414.61970	-0.19190	2.17050	1.49330	HepG2	NOL12
HLF	ENSG00000108924.9	4206.28940	7111.42010	-0.75760	5.03560	3.53440	HepG2	NONO
HLF	ENSG00000108924.9	12957.74760	7075.78750	0.87280	19.52500	17.76940	HepG2	NSUN2
HLF	ENSG00000108924.9	13949.63610	19322.69290	-0.47010	4.92650	3.97210	HepG2	PABPC4
HLF	ENSG00000108924.9	7531.04330	10117.80440	-0.42600	11.47250	9.94020	HepG2	PARN
HLF	ENSG00000108924.9	14354.49530	19195.59430	-0.41930	12.59400	11.44810	HepG2	PCBP1
HLF	ENSG00000108924.9	7022.02940	9150.60860	-0.38200	6.19400	4.39550	HepG2	PKM
HLF	ENSG00000108924.9	9206.36370	14565.69620	-0.66190	5.35760	3.70580	HepG2	PRPF6
HLF	ENSG00000108924.9	4053.07570	5976.04820	-0.56020	6.33270	5.16370	HepG2	PRPF8
HLF	ENSG00000108924.9	13343.79730	19532.17940	-0.54970	20.90000	19.66390	HepG2	PTBP1
HLF	ENSG00000108924.9	8843.57970	14714.41590	-0.73450	17.09940	15.79090	HepG2	PUF60
HLF	ENSG00000108924.9	10025.29140	15619.78210	-0.63970	42.81600	41.05570	HepG2	PUM1
HLF	ENSG00000108924.9	10299.96640	15608.50950	-0.59970	11.01850	9.72910	HepG2	PUM2
HLF	ENSG00000108924.9	9165.86570	12952.05350	-0.49880	19.45980	18.09460	HepG2	PUS1
HLF	ENSG00000108924.9	22289.70110	17180.95420	0.37550	6.29870	5.07150	HepG2	RBM15
HLF	ENSG00000108924.9	4795.55230	16660.91740	-1.79670	151.78110	149.18500	HepG2	RBM22
HLF	ENSG00000108924.9	9379.32570	13656.21460	-0.54200	3.99610	2.78940	HepG2	RBM27
HLF	ENSG00000108924.9	7710.32410	11089.40850	-0.52430	4.89870	3.48150	HepG2	RCC2
HLF	ENSG00000108924.9	11807.43500	21737.48650	-0.88050	52.47650	50.81880	HepG2	NELFE
HLF	ENSG00000108924.9	12765.74500	20245.43080	-0.66530	31.70880	30.04210	HepG2	RECQL
HLF	ENSG00000108924.9	5388.86990	10766.82790	-0.99850	31.16470	29.48340	HepG2	RPS19
HLF	ENSG00000108924.9	6521.95980	12595.38750	-0.94950	12.20450	10.61810	HepG2	RPS2
HLF	ENSG00000108924.9	11038.05160	16664.83840	-0.59430	5.24160	4.13750	HepG2	RPS3A
HLF	ENSG00000108924.9	9884.46920	12856.36160	-0.37920	3.00560	1.88450	HepG2	RPS5
HLF	ENSG00000108924.9	8258.60150	5911.65000	0.48220	5.01050	3.98620	HepG2	RRP9
HLF	ENSG00000108924.9	7297.05590	10806.32130	-0.56650	7.65950	6.12030	HepG2	SERBP1
HLF	ENSG00000108924.9	6334.77840	12411.75210	-0.97030	3.19500	1.70760	HepG2	SF1
HLF	ENSG00000108924.9	9097.99780	17477.87720	-0.94190	11.79160	10.34130	HepG2	SF3A3
HLF	ENSG00000108924.9	11542.54930	7898.12370	0.54730	8.36720	7.20200	HepG2	SF3B1
HLF	ENSG00000108924.9	11857.59430	20335.61960	-0.77820	42.44750	40.65630	HepG2	SF3B4
HLF	ENSG00000108924.9	5539.64550	12029.89840	-1.11880	3.74440	1.99360	HepG2	SFPQ
HLF	ENSG00000108924.9	17198.75090	14108.37910	0.28570	8.52140	7.39680	HepG2	SLBP
HLF	ENSG00000108924.9	4397.40150	10615.57050	-1.27150	147.66660	144.64110	HepG2	SMN1
HLF	ENSG00000108924.9	5580.63310	8788.12080	-0.65510	2.51970	1.77560	HepG2	SNRNP70
HLF	ENSG00000108924.9	9028.47240	18817.99140	-1.05960	88.31100	86.50640	HepG2	SRFBP1
HLF	ENSG00000108924.9	11301.81700	21225.94350	-0.90930	66.20260	64.58910	HepG2	SRSF1
HLF	ENSG00000108924.9	6179.99140	8498.98830	-0.45970	3.65350	2.48710	HepG2	SRSF3
HLF	ENSG00000108924.9	12734.04070	9389.28690	0.43950	12.19070	10.90780	HepG2	SRSF7
HLF	ENSG00000108924.9	15210.20830	17268.40060	-0.18310	3.18970	2.60620	HepG2	SRSF9
HLF	ENSG00000108924.9	11148.87790	14496.42690	-0.37880	2.50680	1.46820	HepG2	STIP1
HLF	ENSG00000108924.9	10982.18640	16522.65350	-0.58930	31.68590	29.97520	HepG2	SUCLG1
HLF	ENSG00000108924.9	9310.23120	11283.30570	-0.27730	3.35010	2.32210	HepG2	SUPT6H
HLF	ENSG00000108924.9	5408.15700	7710.81090	-0.51170	4.78870	3.93590	HepG2	SUPV3L1
HLF	ENSG00000108924.9	16777.87720	19078.59280	-0.18540	2.37670	1.85030	HepG2	TAF15
HLF	ENSG00000108924.9	10531.66340	7778.67450	0.43700	5.41730	4.45220	HepG2	TARDBP
HLF	ENSG00000108924.9	10844.15840	18865.73160	-0.79880	4.37690	3.05810	HepG2	TBRG4
HLF	ENSG00000108924.9	4074.53150	5168.46860	-0.34310	2.36260	1.43520	HepG2	TFIP11
HLF	ENSG00000108924.9	5178.28150	9932.38930	-0.93970	32.86320	31.48500	HepG2	TIAL1
HLF	ENSG00000108924.9	6848.27930	10021.13340	-0.54920	19.38810	18.06750	HepG2	TRIM56
HLF	ENSG00000108924.9	8242.76650	14295.10840	-0.79430	15.94740	14.39120	HepG2	U2AF1
HLF	ENSG00000108924.9	4815.98590	12905.76090	-1.42210	6.12410	4.59300	HepG2	U2AF2
HLF	ENSG00000108924.9	9402.09650	15215.47660	-0.69450	10.17230	8.52940	HepG2	UBE2L3
HLF	ENSG00000108924.9	11546.05930	15500.20580	-0.42490	14.31440	12.96000	HepG2	UPF1
HLF	ENSG00000108924.9	4560.89490	7061.53030	-0.63070	4.79180	3.45460	HepG2	UPF2
HLF	ENSG00000108924.9	12436.43960	15932.03710	-0.35740	8.17390	6.48230	HepG2	UTP18
HLF	ENSG00000108924.9	8984.28690	14964.83830	-0.73610	40.20150	38.30690	HepG2	UTP3
HLF	ENSG00000108924.9	8985.81550	14926.71240	-0.73220	7.27560	5.50160	HepG2	XPO5
HLF	ENSG00000108924.9	18633.99380	13146.63350	0.50310	3.56700	2.11390	HepG2	XRCC5
HLF	ENSG00000108924.9	8925.30090	14704.23650	-0.72030	6.85540	5.24970	HepG2	XRCC6
HLF	ENSG00000108924.9	10029.08700	11344.33620	-0.17780	3.42420	2.68980	HepG2	ZC3H8
HLF	ENSG00000108924.9	12826.57430	17047.25800	-0.41040	18.39240	17.29020	HepG2	ZNF622
HLF	ENSG00000108924.9	9.92120	33.04490	-1.73580	2.75290	1.94600	K562	MTPAP
HLF	ENSG00000108924.9	7.48630	36.70890	-2.29380	4.34390	3.43220	K562	NSUN2
HLF	ENSG00000108924.9	2.53400	33.87980	-3.74090	6.76670	4.14330	K562	NUFIP2
HLF	ENSG00000108924.9	14.11220	0.99400	3.82740	2.25290	1.51920	K562	RPS19
HLF	ENSG00000108924.9	4.85570	36.23270	-2.89950	5.53100	4.40690	K562	SF3A3
HLF	ENSG00000108924.9	4.57950	37.12210	-3.01900	5.97640	4.66720	K562	SRPK2
HLF	ENSG00000108924.9	5.17770	38.92380	-2.91030	6.54200	5.49110	K562	UPF1
HLF	ENSG00000108924.9	6.15040	33.30500	-2.43700	4.36240	3.25390	K562	WDR3
HLF	ENSG00000108924.9	7.01300	34.63950	-2.30430	4.48770	3.42790	K562	WDR43
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for HLF is not available on ENCORE database.

9 RBPs can affect the splicing of HLF :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	HLF	ENSG00000108924.9	chr17	+	53344136	53344216			53342372	53342960	53345111	53345447	0.05700	0.00077	0.01658	included	HepG2	U2AF1
SE	HLF	ENSG00000108924.9	chr17	+	53344136	53344216			53342372	53342960	53345111	53345447	0.05800	0.00001	0.00056	included	HepG2	HNRNPK
SE	HLF	ENSG00000108924.9	chr17	+	53374217	53374295			53366241	53366344	53392587	53392808	-0.25800	0.00044	0.04485	excluded	HepG2	DDX59
SE	HLF	ENSG00000108924.9	chr17	+	53344136	53344216			53343170	53343247	53345111	53345447	-0.49800	0.00617	0.06269	excluded	HepG2	U2AF2
SE	HLF	ENSG00000108924.9	chr17	+	53344136	53344216			53342372	53342960	53345111	53345447	0.12300	0.00001	0.00650	included	HepG2	UCHL5
SE	HLF	ENSG00000108924.9	chr17	+	53344136	53344216			53343582	53343676	53345111	53345447	0.10600	0.00054	0.03611	included	HepG2	NCBP2
SE	HLF	ENSG00000108924.9	chr17	+	53344136	53344216			53343582	53343676	53345111	53345447	0.21000	0.00019	0.01342	included	HepG2	SFPQ
SE	HLF	ENSG00000108924.9	chr17	+	53344136	53344216			53342372	53342960	53345111	53345447	0.09000	0.00001	0.00065	included	HepG2	SF3A3
MXE	HLF	ENSG00000108924.9	chr17	+	53374217	53374295	53391261	53391339	53345176	53345447	53392587	53392808	-0.74000	0.00001	0.00107	2included	HepG2	HNRNPU

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

HLF

General Information

Functions

Localization

Domains (AlphaFold: HLF)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for HLF is not avaliable on ENCORE database.

53 proteins are bound to HLF RNA:

eCLIP assay for HLF is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for HLF is not available on ENCORE database.

134 RBPs can affect the gene expression of HLF :

The Knockdown/knockout RNA-Seq assay for HLF is not available on ENCORE database.

9 RBPs can affect the splicing of HLF :

The Knockdown/knockout RNA-Seq assay for HLF is not avaliable on ENCORE database.