FAM168A

General Information

Gene Name       : FAM168A
Gene ID             : ENSG00000054965.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FAM168A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878FAM168AENSG00000054965.108.929.779.34ENCSR000AEF
HepG2FAM168AENSG00000054965.1012.3311.4411.88ENCSR985KAT
K562FAM168AENSG00000054965.103.463.203.33ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for FAM168A is not avaliable on ENCORE database.



Proteins bound to RNA
  • FAM168A RNA is bound by 19 proteins.  







eCLIP assay for FAM168A is not avaliable on ENCORE database.





19 proteins are bound to FAM168A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr117311709673117150-3'-UTR,intron-Distal3.067423.21873K562GTF2F1
chr117311677073116826-3'-UTR,intron-Distal4.7261011.27586K562UPF1
chr117311392273113972-3'-UTR,intron-Distal3.982853.72865HepG2LIN28B
chr117311608373116134-3'-UTR,intron-Distal4.306313.26739K562FAM120A
chr117311741173117514-3'-UTR,intron-Distal3.419597.26174K562FAM120A
chr117311696573117151-3'-UTR,intron-Distal,intron-Proximal,polyA_site8.2308271.33323K562UPF1
chr117311474673114803-3'-UTR,intron-Distal3.153373.29945HepG2LIN28B
chr117311746173117622-3'-UTR,intron-Distal3.8693914.42441HepG2PCBP2
chr117311694273117011-3'-UTR,intron-Distal,intron-Proximal5.557509.46220HepG2UPF1
chr117311855773118631-3'-UTR,CDS,intron-Distal,intron-Proximal3.716793.06143HepG2IGF2BP1
chr117311696173116997-3'-UTR,intron-Distal,intron-Proximal4.906326.77594K562FAM120A
chr117311756873117623-3'-UTR,intron-Distal4.8775914.32215HepG2UPF1
chr117311676073116827-3'-UTR,intron-Distal5.2714617.44157HepG2UPF1
chr117311580673115837-3'-UTR,intron-Distal4.207343.81568K562FAM120A
chr117317944473179538-3'-UTR,CDS,intron-Distal,intron-Proximal4.393964.84481HepG2PPIG
chr117311704273117143-3'-UTR,intron-Distal3.181103.40404K562CSTF2T
chr117311705873117156-3'-UTR,intron-Distal4.2064115.24564HepG2FAM120A
chr117311752673117568-3'-UTR,intron-Distal5.8566515.42180HepG2UPF1
chr117311754573117628-3'-UTR,intron-Distal3.335126.10277HepG2AKAP1
chr117311704573117167-3'-UTR,intron-Distal7.6251449.16095HepG2UPF1
chr117311675873116828-3'-UTR,intron-Distal5.6002812.91326HepG2AKAP1
chr117311693873117015-3'-UTR,intron-Distal,intron-Proximal5.6265213.43839HepG2AKAP1
chr117311704873117158-3'-UTR,intron-Distal4.7016724.88632HepG2AKAP1
chr117311742773117526-3'-UTR,intron-Distal5.3800117.44157HepG2UPF1
chr117311707973117153-3'-UTR,intron-Distal4.2333817.19853K562FAM120A
chr117311474673114848-3'-UTR,intron-Distal3.982353.98564K562LIN28B
chr117311744273117473-3'-UTR,intron-Distal4.110996.48274K562UPF1
chr117311706473117164-3'-UTR,intron-Distal5.5727013.05195HepG2PRPF4
chr117311688973116927-3'-UTR,intron-Distal3.253093.57996HepG2XPO5
chr117311744573117545-3'-UTR,intron-Distal5.7977113.42494HepG2AKAP1
chr117311703773117079-3'-UTR,intron-Distal5.5377011.01056K562FAM120A
chr117330901773309175-5'-UTR,intron-Distal,intron-Proximal3.103293.00343HepG2GRWD1
chr117314167073141771-CDS,intron-Distal,intron-Proximal3.759717.47181HepG2PRPF8
chr117330212173302191-intron-Distal3.106493.07694HepG2HNRNPC
chr117330873473308777-intron-Distal4.086893.58513HepG2GTF2F1
chr117330866773308727-intron-Distal4.085034.10323HepG2PRPF4
chr117314129573141319-intron-Distal4.614704.62242K562AGGF1
chr117330806673308136-intron-Distal4.154453.86417HepG2PRPF4
chr117330359973303689-intron-Distal4.6116319.34756HepG2PCBP2
chr117330371373303747-intron-Distal6.1631814.64583HepG2PCBP2
chr117330368973303713-intron-Distal5.3831916.88044HepG2PCBP2
chr117330805573308123-intron-Distal4.192643.57264HepG2GTF2F1
chr117326624473266355-intron-Distal3.529085.30446HepG2SUGP2
chr117330837773308472-intron-Distal4.438225.59467HepG2PRPF4
chr117314133073141414-intron-Distal3.822489.51000HepG2HNRNPL
chr117322203773222086-intron-Distal4.717544.75034HepG2XPO5
chr117314127873141300-intron-Distal4.725046.10900HepG2HNRNPL
chr117330872573308796-intron-Distal5.349298.41272HepG2FAM120A
chr117328957173289693-intron-Distal4.369003.80778HepG2QKI
chr117330873173308795-intron-Distal4.135384.43799HepG2CSTF2T
chr117330853973308679-intron-Distal4.372774.71107K562CSTF2T
chr117325819773258290-intron-Distal3.896103.41738HepG2PTBP1
chr117330838073308435-intron-Distal4.677675.44892HepG2FAM120A
chr117317388573173917-intron-Distal3.794033.59803HepG2PTBP1
chr117317388173173967-intron-Distal4.220765.63677K562PTBP1
chr117326602073266156-intron-Distal4.103623.53723HepG2PTBP1
chr117313767873137777-intron-Distal4.024373.37631K562HNRNPL
chr117313769473137752-intron-Distal3.469895.84692HepG2HNRNPL
chr117330816573308290-intron-Distal4.802747.00579HepG2PRPF4
chr117314130073141330-intron-Distal4.077679.44047HepG2HNRNPL
chr117317391773173980-intron-Distal3.138393.45713HepG2PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for FAM168A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FAM168A is not available on ENCORE database.

  • 111 RBPs can affect the levels of FAM168A.  








The Knockdown/knockout RNA-Seq assay for FAM168A is not available on ENCORE database.





111 RBPs can affect the gene expression of FAM168A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FAM168AENSG00000054965.61929.831001331.965500.534804.414803.24520HepG2ABCF1
FAM168AENSG00000054965.61393.169501048.146100.410403.343302.25450HepG2ADAR
FAM168AENSG00000054965.62612.735201746.903500.5807013.7038012.38190HepG2AUH
FAM168AENSG00000054965.6690.692201060.08290-0.618104.394003.21160HepG2BCCIP
FAM168AENSG00000054965.61196.71490921.189800.377402.595601.72370HepG2BCLAF1
FAM168AENSG00000054965.61964.319501084.641000.8567014.5882013.36580HepG2BOP1
FAM168AENSG00000054965.62192.068801599.770400.454303.069402.03940HepG2CCAR1
FAM168AENSG00000054965.61912.532001210.721800.659507.749906.50660HepG2CIRBP
FAM168AENSG00000054965.61305.00180995.756200.390103.062202.34380HepG2CPSF6
FAM168AENSG00000054965.61786.592201527.707000.225702.246101.65650HepG2CELF1
FAM168AENSG00000054965.61860.337901642.609900.179502.030501.38070HepG2DAZAP1
FAM168AENSG00000054965.61557.569201304.475200.255703.206002.31280HepG2DDX19B
FAM168AENSG00000054965.6640.664301076.35580-0.7485012.2068010.04440HepG2DDX1
FAM168AENSG00000054965.6929.424601137.94620-0.292002.022901.43220HepG2DDX21
FAM168AENSG00000054965.61367.03340975.280700.487103.361801.95330HepG2DDX27
FAM168AENSG00000054965.61862.335401130.755500.719704.354203.14070HepG2DDX59
FAM168AENSG00000054965.61642.496701349.445300.283403.308702.57740HepG2DKC1
FAM168AENSG00000054965.6789.544501055.42410-0.418704.681803.78740HepG2DNAJC21
FAM168AENSG00000054965.61222.550301046.123100.224702.344601.73450HepG2DNAJC2
FAM168AENSG00000054965.61835.594201218.334600.591205.952005.09890HepG2EIF2S1
FAM168AENSG00000054965.62129.978301346.384700.661606.675705.68100HepG2EIF4A3
FAM168AENSG00000054965.6996.582101620.57870-0.7014015.5442013.89060HepG2EIF4G1
FAM168AENSG00000054965.61297.27460713.993900.8614013.4482011.77440HepG2FUBP3
FAM168AENSG00000054965.61879.224801358.501100.468004.055603.22890HepG2FXR1
FAM168AENSG00000054965.62134.846801337.880500.674108.249206.69400HepG2G3BP2
FAM168AENSG00000054965.61057.69060797.393800.407502.663501.78460HepG2GEMIN5
FAM168AENSG00000054965.6728.579001337.17590-0.876007.169604.84810HepG2GTF2F1
FAM168AENSG00000054965.6808.193601346.57800-0.7365016.5711014.52080HepG2HDGF
FAM168AENSG00000054965.6822.393101360.23380-0.726004.470502.67400HepG2HLTF
FAM168AENSG00000054965.61449.415701172.790500.305403.147002.38520HepG2HNRNPF
FAM168AENSG00000054965.61879.845701496.276700.329105.718004.78000HepG2HNRNPL
FAM168AENSG00000054965.6950.785001177.38120-0.308403.382902.71840HepG2HNRNPU
FAM168AENSG00000054965.61585.868001280.934900.308002.023001.43660HepG2IGF2BP2
FAM168AENSG00000054965.6998.533301202.65480-0.268303.113102.33950HepG2ILF2
FAM168AENSG00000054965.61818.635901288.421000.497203.462002.32420HepG2KHSRP
FAM168AENSG00000054965.61097.252601689.50370-0.622705.100203.95870HepG2LARP4
FAM168AENSG00000054965.6860.799801088.02260-0.338002.459401.69520HepG2MSI2
FAM168AENSG00000054965.61586.023201098.619300.529603.114702.08190HepG2MTPAP
FAM168AENSG00000054965.61223.87650955.146500.357602.460501.75470HepG2NSUN2
FAM168AENSG00000054965.61568.052101245.649600.332002.161201.51780HepG2PABPC4
FAM168AENSG00000054965.6940.847801165.39800-0.308803.240302.33060HepG2PARN
FAM168AENSG00000054965.62218.175301168.315200.9248031.1763029.51770HepG2PCBP1
FAM168AENSG00000054965.61442.272701124.718200.358704.574003.60560HepG2PRPF4
FAM168AENSG00000054965.61037.33910804.183900.367202.576101.79560HepG2PRPF8
FAM168AENSG00000054965.61552.796001188.817000.385205.285304.57960HepG2PTBP1
FAM168AENSG00000054965.61073.608201554.85680-0.534306.273505.42450HepG2PUF60
FAM168AENSG00000054965.6849.104501649.34960-0.9579021.0302019.28970HepG2PUM2
FAM168AENSG00000054965.61644.970601436.672600.195201.984201.44340HepG2PUS1
FAM168AENSG00000054965.61550.243501287.491300.267802.389201.80170HepG2QKI
FAM168AENSG00000054965.6889.884401295.90990-0.542302.662601.97060HepG2RAVER1
FAM168AENSG00000054965.62128.333801625.436700.388804.641403.56600HepG2RBM15
FAM168AENSG00000054965.61373.917801676.40530-0.287103.248502.69960HepG2RBM22
FAM168AENSG00000054965.61518.194901168.491300.377603.644102.87680HepG2RBM25
FAM168AENSG00000054965.6998.189101357.19670-0.443203.234802.15770HepG2RBM27
FAM168AENSG00000054965.62162.370401323.028700.7087017.7512016.61070HepG2NELFE
FAM168AENSG00000054965.61864.293001232.240400.5972012.7833011.60420HepG2RECQL
FAM168AENSG00000054965.6904.368401277.70660-0.498604.179802.84610HepG2RPS5
FAM168AENSG00000054965.61091.86850795.521300.456703.333902.48120HepG2RRP9
FAM168AENSG00000054965.6903.262501410.14690-0.642604.232102.32390HepG2RTF1
FAM168AENSG00000054965.6847.705301593.97860-0.911008.561307.32260HepG2SF3A3
FAM168AENSG00000054965.61335.732601066.205600.325002.326501.67670HepG2SF3B1
FAM168AENSG00000054965.61425.481101237.689300.203701.821401.32500HepG2SF3B4
FAM168AENSG00000054965.6975.568401222.72940-0.325804.382703.60590HepG2SMN1
FAM168AENSG00000054965.61338.480201893.42120-0.5004010.446609.64180HepG2SRFBP1
FAM168AENSG00000054965.61503.863901291.888900.219102.117201.68760HepG2SRSF1
FAM168AENSG00000054965.61962.411301051.028400.9007030.4359028.98420HepG2SRSF9
FAM168AENSG00000054965.62037.140201643.908200.309304.492803.87100HepG2SSB
FAM168AENSG00000054965.6747.320901113.41330-0.575204.162402.78670HepG2STIP1
FAM168AENSG00000054965.61294.47240907.754300.511905.334104.04820HepG2SUPT6H
FAM168AENSG00000054965.61614.036801161.225700.474906.904006.08830HepG2TAF15
FAM168AENSG00000054965.61463.488501049.956300.479004.598903.69600HepG2TARDBP
FAM168AENSG00000054965.61462.362801066.981100.454705.350604.20030HepG2TIA1
FAM168AENSG00000054965.61441.997201154.274200.321004.110103.45030HepG2TRIM56
FAM168AENSG00000054965.61084.788201519.05570-0.485805.556904.26600HepG2TUFM
FAM168AENSG00000054965.6416.30220612.97270-0.558203.785802.89810HepG2UCHL5
FAM168AENSG00000054965.61621.529901109.929400.5468012.1013010.86290HepG2ZC3H8
FAM168AENSG00000054965.61336.061601554.70490-0.218702.367401.85020HepG2ZNF622
FAM168AENSG00000054965.6523.41300385.598000.440802.546901.38100K562ABCF1
FAM168AENSG00000054965.6338.11500517.16040-0.613104.643103.79040K562AKAP8L
FAM168AENSG00000054965.6823.68190435.752400.9185010.644409.60440K562AQR
FAM168AENSG00000054965.6432.30470542.62400-0.327902.102801.31440K562ATP5C1
FAM168AENSG00000054965.6643.14640305.013301.0762011.9878010.13350K562BOP1
FAM168AENSG00000054965.6262.67990157.947200.733804.378402.99310K562CCAR1
FAM168AENSG00000054965.6570.76180335.434200.766804.027702.70360K562CNOT7
FAM168AENSG00000054965.6528.12380411.252300.360802.528701.47270K562CPEB4
FAM168AENSG00000054965.6480.62350324.293700.567504.139003.17780K562CPSF6
FAM168AENSG00000054965.6540.66210425.574300.345202.425501.80990K562DDX47
FAM168AENSG00000054965.6414.53880556.50750-0.424903.333002.36130K562DKC1
FAM168AENSG00000054965.6353.10920230.650100.614303.381402.36820K562EFTUD2
FAM168AENSG00000054965.6455.39160334.080500.446803.251901.92540K562EIF2S1
FAM168AENSG00000054965.6434.69620246.892600.816005.395303.88680K562EIF3D
FAM168AENSG00000054965.6477.49230317.775000.587404.292003.26940K562EIF4A3
FAM168AENSG00000054965.6646.16880530.465100.284602.203401.36030K562EIF4G2
FAM168AENSG00000054965.6286.30480177.506400.689603.677202.35210K562FKBP4
FAM168AENSG00000054965.6637.29770330.005700.9494010.031608.35430K562FMR1
FAM168AENSG00000054965.6407.74200279.728900.543502.958002.01140K562FTO
FAM168AENSG00000054965.6354.32790216.213300.712505.503603.55010K562FUS
FAM168AENSG00000054965.6440.16720231.248800.928507.199504.90750K562GEMIN5
FAM168AENSG00000054965.6461.37270309.602300.575403.889102.95400K562GPKOW
FAM168AENSG00000054965.6434.10020322.344700.429302.682701.62700K562HNRNPA1
FAM168AENSG00000054965.6427.23950204.566201.0624010.335709.24210K562HNRNPC
FAM168AENSG00000054965.6262.20010182.651000.521502.431801.37440K562HNRNPF
FAM168AENSG00000054965.6522.94910384.595400.443203.004301.89960K562HNRNPL
FAM168AENSG00000054965.6501.89880344.203900.544003.066101.96620K562IGF2BP2
FAM168AENSG00000054965.6494.85000350.168000.498803.568402.17450K562IGF2BP3
FAM168AENSG00000054965.6404.35290264.410000.612703.010602.03180K562KRR1
FAM168AENSG00000054965.6535.21960331.599200.690607.777106.48150K562MTPAP
FAM168AENSG00000054965.6269.66330430.95710-0.676403.543202.51690K562NAA15
FAM168AENSG00000054965.6448.56810317.330800.499203.053801.76330K562NCBP2
FAM168AENSG00000054965.6797.16500580.200000.458203.779702.01450K562NOL12
FAM168AENSG00000054965.6472.84980368.427600.359902.629901.89960K562NSUN2
FAM168AENSG00000054965.6614.00230322.256300.929906.276904.41020K562PABPC1
FAM168AENSG00000054965.6372.75880512.88800-0.460402.808502.26210K562PUS1
FAM168AENSG00000054965.6351.56110499.72650-0.507403.782603.10540K562RBM15
FAM168AENSG00000054965.6574.38580354.865600.694605.867404.19480K562NELFE
FAM168AENSG00000054965.6347.91460240.869700.530403.608501.80600K562RPS10
FAM168AENSG00000054965.6376.86620228.582100.721203.869702.90200K562RPS19
FAM168AENSG00000054965.6482.72040299.361200.689203.389001.62210K562RPS3A
FAM168AENSG00000054965.6466.78120294.509800.664304.083002.88700K562SF3B1
FAM168AENSG00000054965.6501.05920372.473500.427703.407602.38200K562SRPK2
FAM168AENSG00000054965.6526.27250344.670900.610505.009204.06030K562SRSF1
FAM168AENSG00000054965.6503.41560363.678500.469002.679101.34390K562SSRP1
FAM168AENSG00000054965.6326.55800217.234100.588002.245901.33590K562SUPV3L1
FAM168AENSG00000054965.6481.68340348.869000.465302.821302.10790K562TARDBP
FAM168AENSG00000054965.6281.54300176.411700.674303.400602.35800K562TIAL1
FAM168AENSG00000054965.6326.14640187.374500.799505.411503.98380K562TRIM56
FAM168AENSG00000054965.6855.68810652.492900.391003.114301.62050K562UBE2L3
FAM168AENSG00000054965.6343.76300229.957000.580002.925801.87330K562UCHL5
FAM168AENSG00000054965.6743.38070390.652300.9281016.0864014.51750K562UPF1
FAM168AENSG00000054965.6490.80260334.267700.554004.270703.17390K562WDR3
FAM168AENSG00000054965.6479.47840347.607500.463903.984402.98190K562WDR43
FAM168AENSG00000054965.6701.11420516.457800.440903.509102.04710K562WRN
FAM168AENSG00000054965.6653.04690490.805100.411902.973202.07380K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for FAM168A is not available on ENCORE database.





5 RBPs can affect the splicing of FAM168A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEFAM168AENSG00000054965.6chr11-731309187313104473122438731225817314173473141815-0.151000.003740.04196excludedHepG2U2AF2
SEFAM168AENSG00000054965.6chr11-731309187313104473122438731225817314173473141815-0.125000.000560.05276excludedHepG2SRSF7
SEFAM168AENSG00000054965.6chr11-7313606673136093731309187313104473141734731418150.205000.001910.08397includedHepG2PTBP1
SEFAM168AENSG00000054965.6chr11-7313606673136093731309187313104473141734731418150.120000.000540.05808includedHepG2LARP4
SEFAM168AENSG00000054965.6chr11-731794497317953773141734731418157330896773309234-0.100000.002650.06499excludedHepG2SF3A3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for FAM168A is not avaliable on ENCORE database.