TNRC18

General Information

Gene Name       : TNRC18
Gene ID             : ENSG00000182095.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TNRC18)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TNRC18ENSG00000182095.146.5112.429.46ENCSR000AEF
HepG2TNRC18ENSG00000182095.1447.4533.8040.62ENCSR985KAT
K562TNRC18ENSG00000182095.1416.4115.0215.71ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TNRC18 is not avaliable on ENCORE database.



Proteins bound to RNA

  • TNRC18 RNA is bound by 74 proteins.  







eCLIP assay for TNRC18 is not avaliable on ENCORE database.





74 proteins are bound to TNRC18 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr754341505434217-3'-UTR,CDS,intron-Distal3.4268422.98072HepG2DDX3X
chr754297835429838-3'-UTR,intron-Distal3.426878.30481HepG2ILF3
chr753471305347210-3'-UTR,intron-Distal4.796975.07111HepG2UPF1
chr754342215434284-3'-UTR,CDS,intron-Distal,intron-Proximal4.085748.01283HepG2SF3A3
chr753466335346702-3'-UTR,intron-Distal3.180704.44982K562UPF1
chr753466315346731-3'-UTR,intron-Distal3.001678.93908HepG2LARP4
chr753466345346724-3'-UTR,intron-Distal3.010527.15086HepG2CDC40
chr753476695347754-3'-UTR,CDS,intron-Distal3.611148.05338HepG2UPF1
chr753466275346726-3'-UTR,intron-Distal4.1553221.21477HepG2DDX55
chr753469395346990-3'-UTR,intron-Distal7.0765232.85958K562PUM2
chr754341695434270-3'-UTR,CDS,intron-Distal,intron-Proximal3.312513.48123K562XRN2
chr753467495346803-3'-UTR,intron-Distal3.522967.81896HepG2CDC40
chr753467045346724-3'-UTR,intron-Distal3.241883.02845HepG2DDX6
chr754342195434304-3'-UTR,CDS,intron-Distal,intron-Proximal3.133889.86986HepG2SF3B4
chr753474075347496-3'-UTR,intron-Distal3.286444.81596HepG2UPF1
chr754341485434220-3'-UTR,CDS,intron-Distal3.0333710.34629HepG2RPS3
chr754342175434303-3'-UTR,CDS,intron-Distal,intron-Proximal3.269276.67217HepG2PRPF4
chr754630575463212-5'-UTR,intron-Distal,intron-Proximal5.0771713.42224K562NONO
chr754631315463196-5'-UTR,intron-Distal,intron-Proximal4.897956.14086K562GTF2F1
chr754631475463206-5'-UTR,intron-Distal,intron-Proximal3.662687.13163HepG2FKBP4
chr754631375463205-5'-UTR,intron-Distal,intron-Proximal3.098483.87725K562EIF4G2
chr754609645461040-5'-UTR,intron-Distal4.140113.27203K562IGF2BP2
chr754631195463199-5'-UTR,intron-Distal,intron-Proximal3.7639711.37097K562CSTF2T
chr754608675460901-5'-UTR,CDS,intron-Distal3.840936.54942K562NONO
chr754631565463213-5'-UTR,intron-Distal,intron-Proximal3.408218.52842HepG2PRPF4
chr754610945461148-5'-UTR,intron-Distal,intron-Proximal3.3972811.41336K562TIA1
chr754469645447053-5'-UTR,intron-Distal,intron-Proximal3.8668210.91660HepG2PRPF4
chr754631175463209-5'-UTR,intron-Distal,intron-Proximal4.765459.98683K562SLTM
chr754631225463198-5'-UTR,intron-Distal,intron-Proximal3.400166.00630HepG2GTF2F1
chr754631065463209-5'-UTR,intron-Distal,intron-Proximal3.899854.23488K562FAM120A
chr754610565461081-5'-UTR,intron-Distal3.569964.25264K562NONO
chr754608665460927-5'-UTR,CDS,intron-Distal5.3039210.18369K562EWSR1
chr754608105460880-5'-UTR,CDS,intron-Distal3.032489.09653HepG2NKRF
chr754610505461121-5'-UTR,intron-Distal,intron-Proximal3.970724.69442K562PHF6
chr754609955461094-5'-UTR,intron-Distal3.0545314.49916K562TIA1
chr754630845463119-5'-UTR,intron-Distal3.580296.87667K562CSTF2T
chr754630315463074-5'-UTR,intron-Distal4.851555.32906HepG2AQR
chr754609585460995-5'-UTR,intron-Distal3.081246.39395K562TIA1
chr754469925447080-5'-UTR,intron-Distal,intron-Proximal3.149203.99123HepG2XRN2
chr754630915463171-5'-UTR,intron-Distal3.060685.01711K562GEMIN5
chr754611055461154-5'-UTR,intron-Distal,intron-Proximal5.2239810.50469K562NONO
chr754610765461150-5'-UTR,intron-Distal,intron-Proximal4.327174.33867K562FUS
chr754610005461042-5'-UTR,intron-Distal4.894867.09445K562NONO
chr754608435460936-5'-UTR,CDS,intron-Distal3.4708024.27655HepG2DDX3X
chr754105855410629-CDS,intron-Distal4.054709.56778HepG2G3BP1
chr753648125364857-CDS,intron-Distal5.394815.87144HepG2PCBP1
chr753991715399223-CDS,intron-Distal,intron-Proximal4.314013.93614HepG2AQR
chr753968955396901-CDS,intron-Distal3.135213.76566HepG2FXR2
chr754340275434072-CDS,intron-Distal,intron-Proximal5.208596.44303K562AQR
chr754156185415693-CDS,intron-Distal,intron-Proximal3.0760813.89599HepG2PRPF8
chr754287485428789-CDS,intron-Distal3.841038.17224HepG2FXR2
chr753852955385334-CDS,intron-Distal3.275787.54285HepG2FXR2
chr754012315401280-CDS,intron-Distal3.054128.32014HepG2G3BP1
chr754175035417554-CDS,intron-Distal,intron-Proximal4.662808.96422HepG2PRPF8
chr753916775391745-CDS,intron-Distal,intron-Proximal3.066887.34224HepG2AQR
chr754607485460843-CDS,intron-Distal3.3038321.98860HepG2DDX3X
chr753914045391453-CDS,intron-Distal,intron-Proximal4.077506.50183HepG2PRPF8
chr753601865360237-CDS,intron-Distal4.943084.92107K562FXR2
chr754022005402283-CDS,intron-Distal,intron-Proximal3.767466.46098HepG2AQR
chr753967465396790-CDS,intron-Distal3.242296.00722HepG2FXR2
chr753990615399107-CDS,intron-Distal4.315518.20089HepG2FXR2
chr753968535396904-CDS,intron-Distal3.457767.14907HepG2GRWD1
chr754011825401226-CDS,intron-Distal,intron-Proximal5.091964.97857HepG2AQR
chr754108485410965-CDS,intron-Distal4.517868.27565K562FXR2
chr754102895410333-CDS,intron-Distal3.5986514.36417HepG2BUD13
chr754288985428967-CDS,intron-Distal,intron-Proximal3.230568.68715HepG2EFTUD2
chr753556985355750-CDS,intron-Distal,intron-Proximal4.668456.05374HepG2SF3B4
chr754289215428995-CDS,intron-Distal,intron-Proximal3.477033.30959HepG2AQR
chr754272635427309-CDS,intron-Distal,intron-Proximal3.348135.63071HepG2AQR
chr754286985428779-CDS,intron-Distal3.4389718.92562HepG2BUD13
chr754272855427312-CDS,intron-Distal,intron-Proximal5.3669917.51077HepG2PRPF8
chr754023395402389-CDS,intron-Distal4.808064.81990HepG2CDC40
chr753546155354621-CDS,intron-Distal4.102636.05315HepG2FXR2
chr754024075402468-CDS,intron-Distal,intron-Proximal3.9137627.45031HepG2BUD13
chr753725495372611-CDS,intron-Distal,intron-Proximal4.1284112.07820HepG2FXR2
chr753916725391723-CDS,intron-Distal3.5721412.32645HepG2FXR2
chr754105805410627-CDS,intron-Distal3.005866.93806HepG2FXR2
chr754175035417557-CDS,intron-Distal,intron-Proximal3.247313.30959HepG2AQR
chr753637705363848-CDS,intron-Distal,intron-Proximal3.2594713.57685HepG2PRPF8
chr754024015402457-CDS,intron-Distal,intron-Proximal5.491147.22868K562FXR2
chr753852165385244-CDS,intron-Distal3.525513.57687HepG2EIF3H
chr754024025402442-CDS,intron-Distal4.274144.24447K562FMR1
chr753532475353282-CDS,intron-Distal3.265186.11586HepG2G3BP1
chr754136305413715-CDS,intron-Distal,intron-Proximal3.0919613.07474HepG2PRPF8
chr753966985396805-CDS,intron-Distal3.213216.73053HepG2ZNF800
chr754157925415851-CDS,intron-Distal3.6523312.63049HepG2EIF3H
chr754340315434072-CDS,intron-Distal,intron-Proximal3.857226.57821HepG2AQR
chr753546295354654-CDS,intron-Distal3.142425.97777HepG2PPIG
chr754023475402401-CDS,intron-Distal4.715483.94867K562FXR2
chr754103505410480-CDS,intron-Distal4.0185625.97609HepG2FXR2
chr754175715417614-CDS,intron-Distal3.1938515.37536HepG2BUD13
chr754164775416605-CDS,intron-Distal,intron-Proximal4.397007.99930K562DDX24
chr754277255427794-CDS,intron-Distal,intron-Proximal5.209646.23448K562FXR2
chr753608125360886-CDS,intron-Distal,intron-Proximal3.816065.99700HepG2AQR
chr754165425416608-CDS,intron-Distal3.074695.37811HepG2ZNF800
chr753965465396555-CDS,intron-Distal,intron-Proximal4.020695.73518HepG2G3BP1
chr754274905427547-CDS,intron-Distal3.072784.41795HepG2EIF3H
chr753968055396852-CDS,intron-Distal3.362544.48593HepG2FTO
chr754273205427362-CDS,intron-Distal3.875545.65930HepG2RBM15
chr753965495396567-CDS,intron-Distal3.458057.02403HepG2FXR2
chr754103585410454-CDS,intron-Distal4.2128221.28575HepG2EIF3H
chr754165515416617-CDS,intron-Distal3.8507410.54046HepG2SDAD1
chr754277655427805-CDS,intron-Distal3.1505512.27399HepG2BUD13
chr754023265402397-CDS,intron-Distal3.4979711.18101HepG2FXR2
chr754273755427442-CDS,intron-Distal4.700364.92107K562FXR2
chr753852235385294-CDS,intron-Distal3.237798.86870HepG2G3BP1
chr753990345399061-CDS,intron-Distal3.620725.24964HepG2FXR2
chr753964965396573-CDS,intron-Distal,intron-Proximal3.9441619.99887HepG2PRPF8
chr754100095410040-CDS,intron-Distal3.588724.88141HepG2GRWD1
chr754608075460875-CDS,intron-Distal4.109728.91139HepG2STAU2
chr753852035385277-CDS,intron-Distal3.5230215.05851HepG2BUD13
chr754275485427608-CDS,intron-Distal3.017756.79412HepG2FXR2
chr754273185427394-CDS,intron-Distal3.625359.29282HepG2FXR2
chr753648305364878-CDS,intron-Distal3.9604711.10802HepG2FXR2
chr753639515363984-CDS,intron-Distal3.612447.27285HepG2G3BP1
chr754012425401325-CDS,intron-Distal3.9377722.47220HepG2FXR2
chr754275705427665-CDS,intron-Distal,intron-Proximal3.611308.38773HepG2GRWD1
chr753489885349043-CDS,intron-Distal,intron-Proximal4.376004.62947HepG2AQR
chr753547555354778-CDS,intron-Distal3.005678.31392HepG2BUD13
chr754277675427807-CDS,intron-Distal3.115775.77687HepG2PPIG
chr753991175399165-CDS,intron-Distal5.5123514.90559HepG2FXR2
chr753525185352542-CDS,intron-Distal5.5245948.98691HepG2PCBP2
chr753524875352621-CDS,intron-Distal3.159799.00262K562PCBP1
chr754023975402454-CDS,intron-Distal3.083786.53828HepG2FXR2
chr754015285401563-CDS,intron-Distal3.080315.18023HepG2GRWD1
chr754024275402510-CDS,intron-Distal,intron-Proximal3.756277.99229HepG2AQR
chr753639505363986-CDS,intron-Distal3.337704.71438HepG2FXR2
chr754275595427617-CDS,intron-Distal3.361614.66920HepG2RBM15
chr753532445353295-CDS,intron-Distal3.4613211.66888HepG2FXR2
chr754013255401353-CDS,intron-Distal4.2452313.49046HepG2FXR2
chr754140195414113-CDS,intron-Distal4.0549318.46043HepG2PPIG
chr754105045410555-CDS,intron-Distal3.1425110.45192HepG2BUD13
chr754608005460840-CDS,intron-Distal3.893106.09306K562NONO
chr754102775410340-CDS,intron-Distal3.742513.58697HepG2UCHL5
chr753726255372731-CDS,intron-Distal,intron-Proximal4.8515510.38579HepG2AQR
chr754014615401560-CDS,intron-Distal,intron-Proximal3.4350118.66001HepG2PRPF8
chr754275555427612-CDS,intron-Distal3.3489616.60762HepG2BUD13
chr754340755434150-CDS,intron-Distal3.2331011.94397HepG2DDX3X
chr754137385413784-CDS,intron-Distal3.237507.40596HepG2G3BP1
chr753525425352647-CDS,intron-Distal,intron-Proximal5.1155554.50226HepG2PCBP2
chr753965675396618-CDS,intron-Distal3.201828.72026HepG2FXR2
chr753968355396886-CDS,intron-Distal3.4168814.69806HepG2FXR2
chr754156255415678-CDS,intron-Distal,intron-Proximal3.270963.60559HepG2AQR
chr754102785410346-CDS,intron-Distal5.441866.56513K562FXR2
chr754100775410141-CDS,intron-Distal3.676159.41862HepG2FXR2
chr753647345364823-CDS,intron-Distal4.2974415.61588HepG2FXR2
chr753967145396746-CDS,intron-Distal3.148766.58907HepG2FXR2
chr754100045410075-CDS,intron-Distal,intron-Proximal3.4789314.81747HepG2EIF3H
chr754156735415717-CDS,intron-Distal,intron-Proximal3.386094.88141HepG2GRWD1
chr753524785352518-CDS,intron-Distal5.5797737.40449HepG2PCBP2
chr754277655427799-CDS,intron-Distal3.257847.55550HepG2EIF3H
chr754287045428791-CDS,intron-Distal3.628655.05467HepG2LIN28B
chr753991185399169-CDS,intron-Distal3.214827.86141HepG2G3BP1
chr754273355427350-CDS,intron-Distal3.061933.01293HepG2NKRF
chr754287075428768-CDS,intron-Distal4.175126.65221HepG2PCBP1
chr754102605410350-CDS,intron-Distal3.521679.71756HepG2FXR2
chr754024185402457-CDS,intron-Distal,intron-Proximal3.8399512.50573HepG2EIF3H
chr754023365402385-CDS,intron-Distal4.672535.07810HepG2ZNF800
chr754015285401561-CDS,intron-Distal4.4488910.62845HepG2FXR2
chr754302195430277-CDS,intron-Distal,intron-Proximal4.132737.37756HepG2AQR
chr754011865401228-CDS,intron-Distal,intron-Proximal3.827999.25254HepG2PRPF8
chr754109605411062-CDS,intron-Distal,intron-Proximal4.1684912.44329HepG2AQR
chr753967725396910-CDS,intron-Distal,intron-Proximal3.916746.11943K562UCHL5
chr753647075364728-CDS,intron-Distal,intron-Proximal3.124753.30959HepG2AQR
chr754171785417248-CDS,intron-Distal,intron-Proximal3.314117.19609HepG2EFTUD2
chr754104805410556-CDS,intron-Distal3.1090110.54309HepG2FXR2
chr753546215354667-CDS,intron-Distal3.9479710.11318HepG2FXR2
chr753967465396804-CDS,intron-Distal3.192807.38941HepG2GRWD1
chr754176305417697-CDS,intron-Distal,intron-Proximal4.135809.86309HepG2AQR
chr754165645416597-CDS,intron-Distal3.611476.76273HepG2G3BP1
chr753991815399196-CDS,intron-Distal4.673845.03746HepG2BCLAF1
chr754136685413705-CDS,intron-Distal,intron-Proximal5.007525.32906HepG2AQR
chr754273135427396-CDS,intron-Distal3.3084411.22550HepG2EIF3H
chr753647545364866-CDS,intron-Distal3.2728012.42075HepG2G3BP1
chr754276265427665-CDS,intron-Distal,intron-Proximal3.238326.58818HepG2PPIG
chr753852995385442-CDS,intron-Distal,intron-Proximal3.297694.56550HepG2UPF1
chr754102885410336-CDS,intron-Distal3.402363.97363HepG2EIF3H
chr754300155430056-CDS,intron-Distal,intron-Proximal4.428686.46571HepG2RBM22
chr754285465428603-CDS,intron-Distal3.183985.68263HepG2EIF3H
chr753966835396714-CDS,intron-Distal3.668499.56108HepG2FXR2
chr753638445363909-CDS,intron-Distal,intron-Proximal3.3105410.62401HepG2FXR2
chr754276275427670-CDS,intron-Distal,intron-Proximal4.040984.22136HepG2RBM15
chr753965615396603-CDS,intron-Distal3.4679712.00294HepG2BUD13
chr753608025360820-CDS,intron-Distal3.234745.79724HepG2FXR2
chr754276435427656-CDS,intron-Distal4.346408.68179HepG2BUD13
chr753524405352540-CDS,intron-Distal4.922339.37605HepG2PCBP1
chr754139285414063-CDS,intron-Distal4.8471816.62180HepG2G3BP1
chr754104855410533-CDS,intron-Distal4.056837.69623HepG2RBM15
chr754276475427648-CDS,intron-Distal3.088653.40455HepG2FXR2
chr754282415428378-CDS,intron-Distal3.6980319.49013HepG2SDAD1
chr754105855410692-CDS,intron-Distal5.642069.90572K562FXR2
chr754015915401661-CDS,intron-Distal,intron-Proximal3.164666.88174HepG2FXR2
chr753607145360803-CDS,intron-Distal3.395519.66295HepG2GRWD1
chr754140915414111-CDS,intron-Distal3.107183.80299HepG2GRWD1
chr754140785414160-CDS,intron-Distal,intron-Proximal5.319387.45424HepG2AQR
chr753534865353490-CDS,intron-Distal4.530166.74492HepG2FXR2
chr753647265364734-CDS,intron-Distal,intron-Proximal3.083783.35780HepG2FXR2
chr754105065410541-CDS,intron-Distal3.160473.94177HepG2FASTKD2
chr754170585417098-CDS,intron-Distal3.312766.11586HepG2G3BP1
chr754277145427803-CDS,intron-Distal,intron-Proximal3.302526.67987HepG2RBM15
chr753600285360050-CDS,intron-Distal3.245424.55847HepG2G3BP1
chr754101465410231-CDS,intron-Distal5.025476.89655K562FXR2
chr754165865416679-CDS,intron-Distal,intron-Proximal4.7936910.73647HepG2AQR
chr753851995385273-CDS,intron-Distal5.3995716.95431HepG2FXR2
chr754156655415704-CDS,intron-Distal,intron-Proximal3.451599.28206HepG2PPIG
chr754628425462870-intron-Distal3.679993.49390K562DROSHA
chr754589135458984-intron-Distal3.1630838.61917HepG2CSTF2T
chr754612545461274-intron-Distal3.786146.18635K562TIA1
chr754597235459754-intron-Distal3.8328728.46420HepG2CSTF2T
chr754589155458962-intron-Distal4.930666.99833HepG2GTF2F1
chr754627545462792-intron-Distal3.631324.70126HepG2SFPQ
chr754599915460021-intron-Distal3.414456.32106HepG2XRN2
chr753606665360704-intron-Distal,intron-Proximal3.756273.96535HepG2AQR
chr754346125434701-intron-Distal4.996946.87697K562NONO
chr754366595436782-intron-Distal3.265369.43950HepG2FAM120A
chr754628475462874-intron-Distal3.198703.80158K562NONO
chr754169525416994-intron-Distal,intron-Proximal3.804703.39008HepG2AQR
chr754598825459920-intron-Distal3.511176.33927HepG2SFPQ
chr754589305459024-intron-Distal4.026233.03671K562HNRNPM
chr754622275462256-intron-Distal4.0289520.04902HepG2CSTF2T
chr754604145460476-intron-Distal5.216977.35452K562NONO
chr754370785437130-intron-Distal4.519423.34123HepG2FKBP4
chr754601515460207-intron-Distal3.3685717.59913HepG2CSTF2T
chr754598965459943-intron-Distal4.061879.97019HepG2FKBP4
chr754613875461459-intron-Distal4.018654.52383K562FUS
chr753925625392614-intron-Distal7.0851035.56293HepG2HNRNPM
chr753506205350656-intron-Distal3.445318.79534HepG2HNRNPL
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chr754626505462691-intron-Distal3.361725.64759K562NONO
chr753948225394872-intron-Distal4.111193.53404K562HNRNPM
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chr754622325462322-intron-Distal3.764344.24485K562GTF2F1
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chr754346535434704-intron-Distal4.343595.43878K562TIA1
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chr754593505459398-intron-Distal4.363699.24802K562CSTF2T
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chr754596325459663-intron-Distal4.421665.34533K562NONO
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chr754575175457640-intron-Distal5.3489827.31051HepG2QKI
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chr754590225459091-intron-Distal3.3491110.03675K562EWSR1
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chr754589285458972-intron-Distal3.277913.97762K562DDX52
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chr754622815462306-intron-Distal4.013943.99137K562NONO
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chr753506685350705-intron-Distal3.5307411.28503HepG2HNRNPL
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chr753962455396298-intron-Distal4.4114017.77792HepG2HNRNPM
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chr754622545462352-intron-Distal3.620266.03403K562DDX51
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chr754342395434305-intron-Distal,intron-Proximal3.2361711.00283HepG2CSTF2T
chr754632385463340-intron-Distal,intron-Proximal3.5790012.07249K562CSTF2T
chr754589015458964-intron-Distal3.956587.67350K562EIF4G2
chr754369445437038-intron-Distal3.782315.35283K562CSTF2T
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chr754622345462332-intron-Distal3.952574.34492K562XRN2
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chr754346615434712-intron-Distal3.483663.94360HepG2GTF2F1
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chr754590275459080-intron-Distal3.671588.90751K562CSTF2T
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chr754582005458274-intron-Distal3.7224410.17572K562NONO
chr754591595459228-intron-Distal3.411035.58434HepG2FASTKD2
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chr753960615396088-intron-Distal5.6373411.50362HepG2HNRNPM
chr753939675394023-intron-Distal4.784656.73640K562EXOSC5
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chr754612265461264-intron-Distal3.705274.20405K562EWSR1
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chr754625795462631-intron-Distal4.135748.89436K562CSTF2T
chr754588235458869-intron-Distal3.143637.48668HepG2RBFOX2
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chr754626455462683-intron-Distal3.737127.95357K562CSTF2T
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chr754588285459003-intron-Distal3.1544323.04206HepG2SFPQ
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chr754600455460211-intron-Distal3.1433911.48087HepG2XRN2
chr754622335462297-intron-Distal3.545667.97151HepG2FKBP4
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chr754366445436737-intron-Distal4.588034.46290K562EWSR1
chr754586665458682-intron-Distal4.151864.23929HepG2STAU2
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chr754347015434751-intron-Distal3.462094.25264K562NONO
chr754622565462286-intron-Distal3.8552920.00288HepG2CSTF2T
chr753768155376864-intron-Distal3.985843.79098HepG2SUGP2
chr753945635394616-intron-Distal4.606464.69680HepG2BCCIP
chr753924965392543-intron-Distal3.082066.69536HepG2HNRNPM
chr754632385463297-intron-Distal,intron-Proximal4.103955.27813K562EWSR1
chr754622265462305-intron-Distal4.112574.06255HepG2POLR2G
chr754370735437134-intron-Distal3.039333.02792HepG2RBFOX2
chr754600025460044-intron-Distal5.432644.00372K562DDX51
chr753646895364707-intron-Distal,intron-Proximal4.735954.62947HepG2AQR
chr753696155369660-intron-Distal,intron-Proximal4.081713.56713HepG2SF3B4
chr754618685461970-intron-Distal3.246738.97741HepG2PCBP2
chr754593395459378-intron-Distal4.524844.46951K562FAM120A
chr754370695437139-intron-Distal4.074094.23759K562NONO
chr754350355435084-intron-Distal4.009453.30664K562NONO
chr753722145372251-intron-Distal,intron-Proximal4.671313.59236HepG2AQR
chr753948315394865-intron-Distal4.4119112.02410HepG2HNRNPM
chr753622695362330-intron-Distal3.699516.02286HepG2PRPF4
chr753960765396215-intron-Distal5.2581510.00762K562HNRNPM
chr754386685438753-intron-Distal5.136408.70648HepG2GTF2F1
chr753831045383168-intron-Distal4.3822110.63693HepG2ILF3
chr753506485350667-intron-Distal4.868605.18780K562AGGF1
chr753731335373221-intron-Distal3.994746.98486HepG2PRPF4
chr754344715434536-intron-Distal5.006667.86574HepG2GTF2F1
chr753507055350757-intron-Distal3.540136.91966HepG2HNRNPL
chr753610515361143-intron-Distal3.5692210.65420HepG2XPO5
chr754612085461254-intron-Distal,intron-Proximal3.203478.88213K562TIA1
chr754343545434391-intron-Distal3.533164.88931HepG2FAM120A
chr754270005427120-intron-Distal3.632615.13070HepG2HNRNPM
chr753604635360520-intron-Distal3.738116.99774HepG2EFTUD2
chr754593295459408-intron-Distal3.3209252.65683HepG2CSTF2T
chr754596905459757-intron-Distal3.0109615.37517HepG2FAM120A
chr754346515434709-intron-Distal3.599644.35431HepG2PRPF4
chr754599845460025-intron-Distal3.865718.01712HepG2FKBP4
chr753959835396056-intron-Distal7.4639739.66571HepG2HNRNPM
chr754626615462686-intron-Distal3.573234.62996HepG2FKBP4
chr754599845460025-intron-Distal3.160775.87019HepG2SFPQ
chr753581625358255-intron-Distal3.214503.91859HepG2SUGP2
chr753943385394381-intron-Distal4.196273.30687K562EXOSC5
chr754600035460019-intron-Distal3.470654.10368K562AKAP8L
chr753962165396412-intron-Distal3.073854.20629HepG2BCCIP
chr753843195384367-intron-Distal4.080563.91671HepG2RBFOX2
chr753992045399240-intron-Distal,intron-Proximal4.845676.88762HepG2SF3A3
chr753604475360520-intron-Distal4.228593.71567HepG2RBFOX2
chr754547305454806-intron-Distal3.767766.64595HepG2RBFOX2
chr754602395460282-intron-Distal3.2353615.58867HepG2CSTF2T
chr754021525402235-intron-Distal,intron-Proximal5.675358.50915HepG2EFTUD2
chr754627645462790-intron-Distal3.320013.93602K562EWSR1
chr753506565350668-intron-Distal3.511779.16973HepG2HNRNPL
chr754345985434658-intron-Distal3.026095.21953HepG2FAM120A
chr753959125395947-intron-Distal4.204197.32988HepG2HNRNPM
chr754590315459082-intron-Distal3.4772315.49609HepG2NKRF
chr753505805350604-intron-Distal4.4830211.01721HepG2HNRNPL
chr754614175461452-intron-Distal3.622805.29044K562CSTF2T
chr754591755459225-intron-Distal3.509483.47685K562EIF4G2
chr754621015462155-intron-Distal4.350097.92474K562CSTF2T
chr754424315442488-intron-Distal3.086104.34487HepG2STAU2
chr753602465360303-intron-Distal,intron-Proximal4.6006915.41348HepG2SF3B4
chr753611435361202-intron-Distal6.2793727.94480HepG2XPO5
chr754371815437236-intron-Distal3.026833.20331K562CSTF2T
chr754136485413668-intron-Distal,intron-Proximal3.709723.67894HepG2AQR
chr754621185462150-intron-Distal3.5289312.25376HepG2CSTF2T
chr754598745459950-intron-Distal4.4481717.10186K562CSTF2T
chr754597795459832-intron-Distal3.544306.64311K562EWSR1
chr753766985376745-intron-Distal3.516693.68462HepG2MATR3
chr754614065461455-intron-Distal5.018416.64417K562NONO
chr753926695392695-intron-Distal4.052385.12003HepG2HNRNPM
chr754344405434545-intron-Distal3.336607.40698K562AKAP8L
chr754598775459938-intron-Distal3.503948.98343K562EWSR1
chr753629235363008-intron-Distal5.6487413.89103HepG2CSTF2T
chr754586495458673-intron-Distal3.790674.02638HepG2SLTM
chr753882005388371-intron-Distal5.3652812.47085HepG2PCBP2
chr754345015434557-intron-Distal4.2917310.74872HepG2FAM120A
chr754593545459409-intron-Distal3.181528.37891K562SLTM
chr753943065394373-intron-Distal3.669645.29169K562HNRNPM
chr753480485348143-intron-Distal4.289865.16181K562PTBP1
chr754591875459231-intron-Distal4.615115.24683K562AKAP8L
chr754591635459224-intron-Distal4.3793536.11269HepG2CSTF2T
chr754369535437059-intron-Distal4.0000321.97741HepG2CSTF2T
chr753921135392191-intron-Distal3.095445.64015HepG2RBFOX2
chr754598765459942-intron-Distal3.556534.70013HepG2SLTM
chr754344075434527-intron-Distal3.8394310.97289HepG2NKRF
chr753965105396534-intron-Distal,intron-Proximal4.764576.03362HepG2AQR
chr754591575459231-intron-Distal3.561207.55112K562EWSR1
chr754604965460559-intron-Distal4.279037.48999K562NONO
chr754632355463343-intron-Distal,intron-Proximal3.1725811.76445HepG2NCBP2
chr754604005460446-intron-Distal3.381067.19326HepG2SFPQ
chr753946215394656-intron-Distal4.8226320.30836HepG2HNRNPM
chr754597015459744-intron-Distal3.480384.50730K562AKAP8L
chr754603115460350-intron-Distal3.822498.92996HepG2CSTF2T
chr754591725459227-intron-Distal3.575449.43447K562CSTF2T
chr754618725461963-intron-Distal3.106694.55241K562EWSR1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TNRC18 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TNRC18 is not available on ENCORE database.

  • 128 RBPs can affect the levels of TNRC18.  








The Knockdown/knockout RNA-Seq assay for TNRC18 is not available on ENCORE database.





128 RBPs can affect the gene expression of TNRC18 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TNRC18ENSG00000182095.101430.60080820.429300.802105.881604.49960HepG2ADAR
TNRC18ENSG00000182095.101122.575702020.27340-0.847702.241201.75780HepG2AKAP1
TNRC18ENSG00000182095.102547.690903035.38450-0.252703.484002.63450HepG2AKAP8L
TNRC18ENSG00000182095.102212.297503561.64700-0.687006.678105.68320HepG2AUH
TNRC18ENSG00000182095.101117.806902006.60790-0.8441015.7033014.12880HepG2CALR
TNRC18ENSG00000182095.102474.368403020.53940-0.287705.495504.61800HepG2CKAP4
TNRC18ENSG00000182095.10686.204001059.55850-0.626802.413301.70190HepG2CNOT7
TNRC18ENSG00000182095.101146.73580841.377900.446605.106503.72110HepG2YBX3
TNRC18ENSG00000182095.101661.565101334.593600.316002.007601.44320HepG2CELF1
TNRC18ENSG00000182095.10770.228901483.28800-0.945402.546201.89230HepG2DDX21
TNRC18ENSG00000182095.103249.927804166.91870-0.358603.614102.13930HepG2DDX47
TNRC18ENSG00000182095.101380.21110818.922200.7530012.2899011.01890HepG2DNAJC2
TNRC18ENSG00000182095.103567.187102770.152600.364704.140402.72090HepG2EIF2S2
TNRC18ENSG00000182095.102019.574401356.188600.574406.743905.49820HepG2EIF4G2
TNRC18ENSG00000182095.102860.251003687.99420-0.366702.825702.04670HepG2FIP1L1
TNRC18ENSG00000182095.103204.612901782.551100.846103.294002.54220HepG2FXR1
TNRC18ENSG00000182095.101452.17480981.025100.565803.446502.20190HepG2GRSF1
TNRC18ENSG00000182095.103613.959202884.365400.325204.027702.86340HepG2HDGF
TNRC18ENSG00000182095.101469.22430896.935400.711904.441402.67170HepG2HNRNPA0
TNRC18ENSG00000182095.101397.69360833.982900.744909.661708.56280HepG2HNRNPA1
TNRC18ENSG00000182095.101280.89380875.768200.548403.720702.08850HepG2HNRNPAB
TNRC18ENSG00000182095.103036.484701583.762000.9389036.4463034.35750HepG2HNRNPF
TNRC18ENSG00000182095.102534.178601675.509200.596802.564201.89090HepG2HNRNPK
TNRC18ENSG00000182095.102219.608601307.228300.7637027.4184025.55450HepG2HNRNPL
TNRC18ENSG00000182095.101372.62700921.564300.574706.470605.57520HepG2HNRNPU
TNRC18ENSG00000182095.102423.839301559.561300.6361010.768809.43210HepG2IGF2BP1
TNRC18ENSG00000182095.101249.66330941.338900.408703.419202.61010HepG2ILF2
TNRC18ENSG00000182095.101605.278801010.586500.667505.265803.54980HepG2KHDRBS1
TNRC18ENSG00000182095.103446.445801783.180600.950606.621305.61840HepG2MAGOH
TNRC18ENSG00000182095.103608.258801792.900801.008906.519905.58340HepG2MATR3
TNRC18ENSG00000182095.101738.396902984.10200-0.7795016.1355014.36890HepG2MSI2
TNRC18ENSG00000182095.103192.521401834.922200.798905.110204.26090HepG2NCBP2
TNRC18ENSG00000182095.102341.297401422.988600.718304.397503.43720HepG2NOL12
TNRC18ENSG00000182095.101987.312001151.517700.787206.324104.16560HepG2NOLC1
TNRC18ENSG00000182095.103160.642101888.444000.742904.388803.45180HepG2NSUN2
TNRC18ENSG00000182095.101422.97950912.128800.6415011.345809.82100HepG2PARN
TNRC18ENSG00000182095.102537.206601675.061500.598905.467204.66030HepG2PCBP1
TNRC18ENSG00000182095.101704.327901206.532100.498202.854701.60410HepG2PKM
TNRC18ENSG00000182095.102185.52830821.953001.4108018.9711017.17110HepG2PPIL4
TNRC18ENSG00000182095.101883.171702558.43840-0.442104.395503.44530HepG2PRPF4
TNRC18ENSG00000182095.101619.104401358.358300.253201.840001.34040HepG2PUF60
TNRC18ENSG00000182095.103038.353301441.946801.0752061.6307059.61160HepG2PUM1
TNRC18ENSG00000182095.101587.296703418.06570-1.1066015.6096014.58330HepG2RBM22
TNRC18ENSG00000182095.102508.205201203.860901.0589018.2190015.70400HepG2RBM27
TNRC18ENSG00000182095.101716.02950977.594500.811707.243605.54020HepG2RCC2
TNRC18ENSG00000182095.104246.576001896.906001.1626060.1743058.43390HepG2NELFE
TNRC18ENSG00000182095.103754.698501766.873301.0874025.8409024.29750HepG2RECQL
TNRC18ENSG00000182095.101274.830701705.98280-0.420303.689802.91940HepG2RPLP0
TNRC18ENSG00000182095.102074.894801064.895000.9622010.763209.23160HepG2RPS3A
TNRC18ENSG00000182095.101685.87090820.664501.0385012.7329011.50150HepG2SAFB2
TNRC18ENSG00000182095.102024.333501002.758101.013405.996604.07860HepG2SART3
TNRC18ENSG00000182095.103518.754301895.370800.892502.674901.35320HepG2SF1
TNRC18ENSG00000182095.103119.385801774.458300.813804.713303.97220HepG2SF3B4
TNRC18ENSG00000182095.102916.727601302.432301.1630044.2340042.13590HepG2SLBP
TNRC18ENSG00000182095.102290.940103860.45510-0.7528011.5781010.74310HepG2SRFBP1
TNRC18ENSG00000182095.101047.078901852.22950-0.8229016.7447015.78930HepG2SRSF1
TNRC18ENSG00000182095.103367.408901341.168401.3280071.5984069.06400HepG2SRSF5
TNRC18ENSG00000182095.102328.137001555.966900.581304.680603.81070HepG2SRSF7
TNRC18ENSG00000182095.101778.563301506.955500.239003.015302.44420HepG2SRSF9
TNRC18ENSG00000182095.102320.887803351.57180-0.530206.977706.23420HepG2SSB
TNRC18ENSG00000182095.101295.93150926.662700.483802.811101.70070HepG2STIP1
TNRC18ENSG00000182095.102422.466601525.288700.6673011.5058010.38390HepG2SUCLG1
TNRC18ENSG00000182095.10655.534401009.18540-0.622402.343701.71470HepG2SUPV3L1
TNRC18ENSG00000182095.10716.338401665.07580-1.2169025.6691024.19360HepG2TAF15
TNRC18ENSG00000182095.101893.21390903.488801.067209.630308.67610HepG2TRIM56
TNRC18ENSG00000182095.103103.722001327.041401.225706.061904.70180HepG2TUFM
TNRC18ENSG00000182095.102432.024603154.42970-0.375203.410102.71830HepG2U2AF1
TNRC18ENSG00000182095.102066.391501404.641200.556802.186101.44710HepG2UBE2L3
TNRC18ENSG00000182095.103333.438403831.57060-0.200902.151501.52300HepG2UPF1
TNRC18ENSG00000182095.102616.097703699.21630-0.4998012.9116011.75860HepG2UTP3
TNRC18ENSG00000182095.101721.37000953.881300.851608.241606.36070HepG2XPO5
TNRC18ENSG00000182095.102178.833902524.78390-0.212602.878402.19570HepG2ZC3H8
TNRC18ENSG00000182095.102619.755504213.98070-0.6858021.5793020.40760HepG2ZNF622
TNRC18ENSG00000182095.102041.745501321.126600.627903.037501.67430HepG2ZRANB2
TNRC18ENSG00000182095.10799.361401060.82520-0.408304.591603.89280K562AGGF1
TNRC18ENSG00000182095.101479.147501165.711800.343502.543401.60820K562AKAP8
TNRC18ENSG00000182095.10708.834401103.84290-0.639007.137306.04630K562AKAP8L
TNRC18ENSG00000182095.10443.21580644.98700-0.541303.527002.88050K562AQR
TNRC18ENSG00000182095.10388.05870209.249900.890908.374806.66860K562BCLAF1
TNRC18ENSG00000182095.10747.92200361.573601.048503.195502.25740K562BOP1
TNRC18ENSG00000182095.10453.74320284.296600.674402.987701.88600K562CCAR1
TNRC18ENSG00000182095.101186.83490817.683300.537407.615405.75600K562CPEB4
TNRC18ENSG00000182095.10643.32710384.478200.742604.281903.30510K562CPSF6
TNRC18ENSG00000182095.10370.70740158.747401.223404.648903.22570K562CSTF2
TNRC18ENSG00000182095.10552.28650983.71040-0.8328012.9122010.89520K562CELF1
TNRC18ENSG00000182095.10306.59700183.407300.741205.666003.77380K562DDX27
TNRC18ENSG00000182095.10600.38330453.832900.403602.815301.76440K562DDX3X
TNRC18ENSG00000182095.10664.08900460.118600.529305.321103.29170K562DDX6
TNRC18ENSG00000182095.10473.51840318.307100.572903.553402.01760K562DHX30
TNRC18ENSG00000182095.10523.27990305.699800.775403.912402.29560K562DNAJC21
TNRC18ENSG00000182095.10458.96800215.952001.0876010.048408.19850K562EFTUD2
TNRC18ENSG00000182095.102066.93370452.501602.19140113.73400110.93010K562EIF2S2
TNRC18ENSG00000182095.10574.67090231.120301.314008.113806.18420K562EIF3D
TNRC18ENSG00000182095.10396.46870231.189500.778003.669501.44550K562EIF3H
TNRC18ENSG00000182095.101141.55960799.913200.513006.061904.68740K562EIF4G2
TNRC18ENSG00000182095.10548.80450407.471400.429503.012701.68930K562EXOSC5
TNRC18ENSG00000182095.10670.96150391.155400.778404.599803.49370K562FMR1
TNRC18ENSG00000182095.10645.40900331.521300.961009.002207.26050K562FTO
TNRC18ENSG00000182095.1083.82120159.62400-0.929304.819503.00280K562FUS
TNRC18ENSG00000182095.1027.69490102.59890-1.889307.805906.49020K562G3BP2
TNRC18ENSG00000182095.10423.90640216.516500.969204.793502.89800K562GEMIN5
TNRC18ENSG00000182095.10500.35300745.27060-0.574806.385804.69220K562GLRX3
TNRC18ENSG00000182095.10639.77480367.099400.801308.148906.78330K562GPKOW
TNRC18ENSG00000182095.10750.82650313.634701.2593019.7990018.28140K562HNRNPC
TNRC18ENSG00000182095.10524.68690764.60220-0.543304.116802.79960K562HNRNPL
TNRC18ENSG00000182095.10888.63980592.879200.583806.608905.21940K562HNRNPU
TNRC18ENSG00000182095.10870.04420577.355500.591505.379504.28590K562HSPD1
TNRC18ENSG00000182095.10473.40270251.486900.912502.561401.58620K562IGF2BP2
TNRC18ENSG00000182095.10437.42090255.698300.774506.893404.88400K562IGF2BP3
TNRC18ENSG00000182095.10769.139601171.43140-0.607006.273404.91570K562KIF1C
TNRC18ENSG00000182095.10455.62830313.411600.539702.569301.67330K562KRR1
TNRC18ENSG00000182095.10519.71880264.060600.9768011.235409.46340K562MAGOH
TNRC18ENSG00000182095.10626.92820358.322700.806908.537306.93560K562METAP2
TNRC18ENSG00000182095.10603.89040852.60230-0.497602.724201.60460K562MSI2
TNRC18ENSG00000182095.10396.16420919.83070-1.215307.447205.72900K562NAA15
TNRC18ENSG00000182095.10364.31310213.024800.774104.711502.89430K562NONO
TNRC18ENSG00000182095.10374.82580234.904300.674003.434502.34470K562PCBP2
TNRC18ENSG00000182095.101159.81710821.944400.496704.080902.36760K562PNPT1
TNRC18ENSG00000182095.10582.13130397.530200.550204.683503.64070K562POLR2G
TNRC18ENSG00000182095.10338.40020210.148700.687203.613902.75580K562PRPF8
TNRC18ENSG00000182095.10416.81990281.203500.567703.580602.53350K562PSIP1
TNRC18ENSG00000182095.10494.29170256.569500.9459010.967709.70780K562PTBP1
TNRC18ENSG00000182095.101336.48450909.545500.555107.658906.03720K562PUM2
TNRC18ENSG00000182095.10466.227101094.66490-1.2314020.4295018.98390K562PUS1
TNRC18ENSG00000182095.10498.16990303.348200.715603.942301.62730K562RBFOX2
TNRC18ENSG00000182095.10570.000901066.62280-0.9040015.9727014.53120K562RBM15
TNRC18ENSG00000182095.10550.95350245.887201.1638014.8745012.74360K562RBM22
TNRC18ENSG00000182095.10496.77660258.787900.940705.781304.12060K562NELFE
TNRC18ENSG00000182095.10317.23660213.988400.567902.327401.58140K562RPS19
TNRC18ENSG00000182095.10455.51170255.519400.834005.715404.20970K562RPS3
TNRC18ENSG00000182095.10532.71620349.061300.609803.808702.65760K562SF3B1
TNRC18ENSG00000182095.10340.29700243.202400.484502.441101.49220K562SRFBP1
TNRC18ENSG00000182095.10599.15460880.15580-0.554807.936406.44600K562SRPK2
TNRC18ENSG00000182095.10512.40270251.550901.026306.830505.72900K562SRSF1
TNRC18ENSG00000182095.10519.15650246.660001.0735011.262409.00620K562SRSF4
TNRC18ENSG00000182095.10440.63780237.638100.890708.151006.25140K562SRSF5
TNRC18ENSG00000182095.10306.58080203.341200.592302.628601.63940K562SUPV3L1
TNRC18ENSG00000182095.10573.41670254.527301.171705.517004.50090K562TARDBP
TNRC18ENSG00000182095.10659.25670245.535701.4248019.8461017.50850K562TIA1
TNRC18ENSG00000182095.10397.48890241.082300.721302.789201.69230K562TRA2A
TNRC18ENSG00000182095.10426.96510287.327000.571303.696502.57250K562TRIM56
TNRC18ENSG00000182095.101558.74160923.087800.7557018.4423016.76700K562UPF1
TNRC18ENSG00000182095.10930.51990637.481000.545604.273802.77310K562UTP3
TNRC18ENSG00000182095.10965.10310821.386800.232502.052601.31640K562WDR43
TNRC18ENSG00000182095.10440.16380219.312001.005005.234903.37490K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TNRC18 is not available on ENCORE database.





9 RBPs can affect the splicing of TNRC18 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETNRC18ENSG00000182095.10chr7-5369567536960053647265364879537225253725090.235000.004370.06794includedHepG2U2AF1
SETNRC18ENSG00000182095.10chr7-5460690546112054340705434226546307154631770.260000.000280.00706includedHepG2U2AF1
SETNRC18ENSG00000182095.10chr7-5401224540135353990285399200540152754016640.150000.000930.02537includedHepG2HNRNPK
SETNRC18ENSG00000182095.10chr7-540122454013535399028539920054015275401664-0.119000.000890.07922excludedHepG2DDX59
SETNRC18ENSG00000182095.10chr7-5369567536960053647265364879537225253725090.335000.000510.04610includedHepG2QKI
SETNRC18ENSG00000182095.10chr7-543367254338635430115543025954340705434226-0.175000.000110.03214excludedK562SBDS
SETNRC18ENSG00000182095.10chr7-540122454013535399028539920054015275401664-0.252000.001380.03322excludedHepG2SRSF1
SETNRC18ENSG00000182095.10chr7-5446780544690554340705434226546069054611200.061000.001220.03573includedHepG2SF3A3
SETNRC18ENSG00000182095.10chr7-540122454013535399028539920054015275401664-0.129000.000630.06967excludedHepG2SSB
SETNRC18ENSG00000182095.10chr7-540122454013535399028539920054015275401664-0.235000.001140.06690excludedHepG2SRSF9

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TNRC18 is not avaliable on ENCORE database.