GGT1

General Information

Gene Name       : GGT1
Gene ID             : ENSG00000100031.18
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GGT1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GGT1ENSG00000100031.181.355.013.18ENCSR000AEF
HepG2GGT1ENSG00000100031.1855.6217.8136.71ENCSR985KAT
K562GGT1ENSG00000100031.187.494.806.14ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GGT1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • GGT1 RNA is bound by 9 proteins.  







eCLIP assay for GGT1 is not avaliable on ENCORE database.





9 proteins are bound to GGT1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr222500391525003940+3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.690237.46114HepG2DDX3X
chr222502382825023938+3'-UTR,CDS5.068388.51975HepG2PABPN1
chr222502483025024902+3'-UTR3.259093.28107HepG2PABPN1
chr222502407225024160+3'-UTR,CDS,intron-Distal,intron-Proximal3.488143.44847HepG2PABPN1
chr222499921224999294+5'-UTR,intron-Distal,intron-Proximal3.7589817.11202HepG2DDX3X
chr222499921124999290+5'-UTR,intron-Distal,intron-Proximal3.988075.68852HepG2RPS3
chr222500537225005434+5'-UTR,intron-Distal5.6543113.88286HepG2RBFOX2
chr222499916224999212+5'-UTR,intron-Distal4.1135712.55615HepG2DDX3X
chr222500557425005616+5'-UTR,intron-Distal4.127123.45219HepG2RBFOX2
chr222501701425017037+CDS,intron-Distal3.402413.77917HepG2SND1
chr222501689025016973+CDS,intron-Distal3.425255.54305HepG2LIN28B
chr222501690225017014+CDS,intron-Distal3.602686.28249HepG2SND1
chr222501638725016460+CDS3.013026.16530HepG2SND1
chr222500529725005414+intron-Distal,intron-Proximal3.451663.91530HepG2PRPF4
chr222500528925005340+intron-Distal,intron-Proximal3.8937811.26755HepG2RBFOX2
chr222500015825000220+intron-Distal3.579315.82968HepG2CSTF2T
chr222500534025005372+intron-Distal4.1525015.71971HepG2RBFOX2
chr222501091325010975+intron-Proximal5.419406.82887HepG2EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GGT1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GGT1 is not available on ENCORE database.

  • 131 RBPs can affect the levels of GGT1.  








The Knockdown/knockout RNA-Seq assay for GGT1 is not available on ENCORE database.





131 RBPs can affect the gene expression of GGT1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GGT1ENSG00000100031.14258.85350696.01200-1.427006.318804.76810HepG2AATF
GGT1ENSG00000100031.14568.069101486.95930-1.3882015.3324013.43050HepG2ABCF1
GGT1ENSG00000100031.14647.281101191.16740-0.8799022.1245020.77650HepG2ACO1
GGT1ENSG00000100031.14255.04580568.61860-1.156706.984505.49130HepG2ADAR
GGT1ENSG00000100031.14610.664501451.56360-1.249206.561505.78100HepG2AKAP1
GGT1ENSG00000100031.142207.490001235.597000.837106.376504.83560HepG2AKAP8
GGT1ENSG00000100031.141941.430601196.661000.6980017.2797015.58660HepG2AKAP8L
GGT1ENSG00000100031.141901.721901200.932400.663105.969304.83760HepG2ASCC1
GGT1ENSG00000100031.142021.778901538.223200.394303.722702.94760HepG2AUH
GGT1ENSG00000100031.141245.08800634.433000.972603.923302.80650HepG2BCCIP
GGT1ENSG00000100031.14933.96830682.101400.453302.821102.21710HepG2BOP1
GGT1ENSG00000100031.141480.488401113.683400.410603.514102.13680HepG2BUD13
GGT1ENSG00000100031.14840.163901503.28700-0.839405.653504.23340HepG2CCAR1
GGT1ENSG00000100031.14621.976301141.00550-0.875403.808402.91040HepG2CIRBP
GGT1ENSG00000100031.141885.648501190.784900.6630018.9919017.59320HepG2CKAP4
GGT1ENSG00000100031.141214.04490626.171700.9551013.6419012.25150HepG2CPSF6
GGT1ENSG00000100031.141876.298301224.064400.616108.073806.28270HepG2CPSF7
GGT1ENSG00000100031.141264.02730583.140501.116009.949008.08100HepG2YBX3
GGT1ENSG00000100031.141238.87520933.717200.407903.536002.82780HepG2CELF1
GGT1ENSG00000100031.141451.774101003.842900.532205.638904.63260HepG2DAZAP1
GGT1ENSG00000100031.14919.21410583.898200.654606.192104.52860HepG2DDX1
GGT1ENSG00000100031.14427.15490751.26550-0.814602.959702.01170HepG2DDX24
GGT1ENSG00000100031.142164.507701390.242100.638605.979305.09300HepG2DDX3X
GGT1ENSG00000100031.14893.45320552.223100.694003.172602.12620HepG2DHX30
GGT1ENSG00000100031.14468.866301139.59250-1.2813035.8261034.11310HepG2DKC1
GGT1ENSG00000100031.141389.29530572.521101.2789022.4286020.63870HepG2DNAJC21
GGT1ENSG00000100031.141023.89360567.580600.8511014.4681013.09340HepG2DNAJC2
GGT1ENSG00000100031.141668.075801148.040300.538903.413802.75910HepG2EIF2S1
GGT1ENSG00000100031.14857.852201268.44140-0.564302.279201.69680HepG2EIF4A3
GGT1ENSG00000100031.141672.40820990.466600.755603.121502.24220HepG2EIF4G1
GGT1ENSG00000100031.141290.72870948.783200.443904.055503.08270HepG2EIF4G2
GGT1ENSG00000100031.142511.903501766.191900.508005.564204.76100HepG2ETF1
GGT1ENSG00000100031.14755.737001163.87360-0.623007.438606.07270HepG2EWSR1
GGT1ENSG00000100031.14427.99910731.11540-0.772503.079301.87900HepG2FASTKD2
GGT1ENSG00000100031.14861.106601501.37240-0.802008.333807.07880HepG2FIP1L1
GGT1ENSG00000100031.141879.88130627.316901.583302.395301.45710HepG2FTO
GGT1ENSG00000100031.141630.058101129.980300.528506.175005.02510HepG2FUBP3
GGT1ENSG00000100031.142521.621801187.544001.0863017.7319016.12350HepG2G3BP1
GGT1ENSG00000100031.14471.94880776.65330-0.718604.013902.92270HepG2GEMIN5
GGT1ENSG00000100031.141940.73320751.758701.3682026.0787023.11840HepG2GNB2L1
GGT1ENSG00000100031.141775.78980709.719801.3230012.9912011.70130HepG2GPKOW
GGT1ENSG00000100031.141542.655801137.148900.439907.082505.60870HepG2HDGF
GGT1ENSG00000100031.14377.89870578.00730-0.613103.269702.57480HepG2HNRNPA1
GGT1ENSG00000100031.141352.50700840.043900.6870013.3320011.91310HepG2HNRNPF
GGT1ENSG00000100031.141737.76750677.307201.3593027.4860025.84560HepG2HNRNPLL
GGT1ENSG00000100031.141183.34510638.710700.8895015.8689014.51320HepG2HNRNPU
GGT1ENSG00000100031.141432.29020827.196800.7919013.7000012.21690HepG2IGF2BP1
GGT1ENSG00000100031.142118.747401206.955000.8117010.622809.39210HepG2IGF2BP2
GGT1ENSG00000100031.14562.144201133.30950-1.011503.040102.00800HepG2IGF2BP3
GGT1ENSG00000100031.141153.54060652.415300.8221014.9765013.42780HepG2ILF2
GGT1ENSG00000100031.141953.097001214.285100.685604.348503.06390HepG2KHSRP
GGT1ENSG00000100031.141921.088701088.799500.8191028.7646025.99700HepG2KIF1C
GGT1ENSG00000100031.14922.337901588.30580-0.784104.426703.36770HepG2LARP4
GGT1ENSG00000100031.141067.24580773.273200.464703.640402.24450HepG2LIN28B
GGT1ENSG00000100031.14869.086701288.12990-0.567702.289501.71200HepG2MATR3
GGT1ENSG00000100031.14586.03270912.86840-0.639403.208902.07600HepG2METAP2
GGT1ENSG00000100031.141902.687801214.674200.647408.964907.58910HepG2MSI2
GGT1ENSG00000100031.141449.16790690.972201.068404.496403.24120HepG2MTPAP
GGT1ENSG00000100031.14973.24430666.034200.547104.802702.91840HepG2NIP7
GGT1ENSG00000100031.141526.40630995.415600.616706.742105.55760HepG2NOL12
GGT1ENSG00000100031.14850.32840505.082500.751405.024203.11380HepG2NOLC1
GGT1ENSG00000100031.14987.89060600.631100.717805.925504.85610HepG2NSUN2
GGT1ENSG00000100031.142012.375601173.575400.777908.596207.34270HepG2PABPC4
GGT1ENSG00000100031.141448.209501197.721500.273902.906102.28770HepG2PCBP1
GGT1ENSG00000100031.141519.733001132.719100.423903.500801.55240HepG2PES1
GGT1ENSG00000100031.141180.98690569.672301.0517018.9356017.13680HepG2PPIL4
GGT1ENSG00000100031.14673.88960887.41330-0.397104.167803.23950HepG2PRPF4
GGT1ENSG00000100031.14952.44530480.747600.986303.305402.43010HepG2PRPF8
GGT1ENSG00000100031.141385.73950950.248000.544206.607305.73990HepG2PUF60
GGT1ENSG00000100031.141603.065201008.009600.669208.492207.34560HepG2PUM2
GGT1ENSG00000100031.141829.491601213.263200.5925014.1490012.94520HepG2PUS1
GGT1ENSG00000100031.141573.752801319.940300.253602.127301.56740HepG2QKI
GGT1ENSG00000100031.14203.81920638.27300-1.646903.198302.44390HepG2RAVER1
GGT1ENSG00000100031.14722.28550482.592100.581703.288101.40620HepG2RBM14
GGT1ENSG00000100031.141052.668901476.18750-0.487807.072306.33390HepG2RBM22
GGT1ENSG00000100031.14783.092701356.31750-0.7924016.8908015.77280HepG2NELFE
GGT1ENSG00000100031.141582.22510905.032900.805802.829402.13970HepG2RPLP0
GGT1ENSG00000100031.141079.97310848.959400.347101.979301.45130HepG2RPS19
GGT1ENSG00000100031.141131.25680819.191500.465603.459402.56470HepG2RPS2
GGT1ENSG00000100031.141395.58940810.235300.784404.879603.81550HepG2RPS3A
GGT1ENSG00000100031.141288.53930836.259600.623604.417003.04370HepG2RPS5
GGT1ENSG00000100031.141380.39530568.777701.2790035.9051033.98340HepG2SAFB2
GGT1ENSG00000100031.14999.594501450.76340-0.537403.404902.65450HepG2SF3A3
GGT1ENSG00000100031.14909.844901268.87270-0.479907.062106.18620HepG2SF3B4
GGT1ENSG00000100031.141563.67400911.227800.7790023.1153021.47810HepG2SLBP
GGT1ENSG00000100031.141072.66640623.326000.783003.109601.42000HepG2SND1
GGT1ENSG00000100031.141227.32720498.486601.299805.205703.27140HepG2SNRNP200
GGT1ENSG00000100031.142310.30870745.896701.6309023.4876021.29030HepG2SNRNP70
GGT1ENSG00000100031.14638.760901667.26040-1.3841054.3995052.91420HepG2SRFBP1
GGT1ENSG00000100031.14615.554901324.40770-1.1054031.3476030.13590HepG2SRSF1
GGT1ENSG00000100031.14432.62160721.44970-0.737802.868501.84750HepG2SRSF3
GGT1ENSG00000100031.142573.28100938.282901.4554019.4400017.98630HepG2SRSF5
GGT1ENSG00000100031.141106.78820825.338400.423204.523403.66630HepG2SRSF7
GGT1ENSG00000100031.14931.957001077.45840-0.209301.812301.34820HepG2SRSF9
GGT1ENSG00000100031.14180.952101447.50870-2.99990138.71210136.59220HepG2SSB
GGT1ENSG00000100031.141553.555001002.415700.632004.824503.23420HepG2STAU1
GGT1ENSG00000100031.141855.951601067.042100.7984023.7484022.21950HepG2SUCLG1
GGT1ENSG00000100031.141304.993301013.422500.364702.984002.01090HepG2SUPT6H
GGT1ENSG00000100031.141064.51350620.907900.777602.630301.96830HepG2SUPV3L1
GGT1ENSG00000100031.14825.385501190.37200-0.528302.303901.78410HepG2TAF15
GGT1ENSG00000100031.141586.34880660.415801.2642025.8040024.02820HepG2TARDBP
GGT1ENSG00000100031.141270.07420620.483501.0333016.0218014.99750HepG2TIAL1
GGT1ENSG00000100031.141228.76530626.184000.9725025.6311024.13130HepG2TRIM56
GGT1ENSG00000100031.142950.40260928.422101.6680013.0346010.94560HepG2TUFM
GGT1ENSG00000100031.141857.27010982.766300.918206.174404.89490HepG2UBE2L3
GGT1ENSG00000100031.143526.641001286.607301.4546094.6760091.92410HepG2UPF1
GGT1ENSG00000100031.141874.002301322.437600.502809.039707.27450HepG2UTP18
GGT1ENSG00000100031.14775.816501242.16580-0.6791012.6492011.50930HepG2UTP3
GGT1ENSG00000100031.141132.28400725.781200.641503.334402.12180HepG2XPO5
GGT1ENSG00000100031.143112.758001415.019001.1373069.8561068.07680HepG2ZNF622
GGT1ENSG00000100031.1491.74490154.29130-0.750002.870201.66450K562AARS
GGT1ENSG00000100031.14447.59190334.439900.420302.474701.55280K562AKAP8
GGT1ENSG00000100031.14423.96880316.659200.420902.241301.65060K562AKAP8L
GGT1ENSG00000100031.14194.76880118.098200.721703.653102.54350K562BCLAF1
GGT1ENSG00000100031.14172.05690100.530100.775203.119301.59250K562BUD13
GGT1ENSG00000100031.14193.39910128.442600.590402.420801.44870K562CCAR1
GGT1ENSG00000100031.14150.8351089.886700.746702.880702.08240K562CPSF6
GGT1ENSG00000100031.14304.88540220.277900.468802.583501.41540K562DDX21
GGT1ENSG00000100031.14146.81290252.87520-0.784403.325202.62050K562DDX47
GGT1ENSG00000100031.14168.2887095.841200.812103.103501.30200K562DDX51
GGT1ENSG00000100031.1461.22720130.64640-1.093403.139002.05960K562EIF3A
GGT1ENSG00000100031.14242.50190161.619400.585303.316402.02730K562EIF4B
GGT1ENSG00000100031.14251.98230131.361500.939706.566804.56620K562EXOSC5
GGT1ENSG00000100031.1488.02600146.58800-0.735802.579401.49810K562FKBP4
GGT1ENSG00000100031.14138.8495077.548600.840203.137402.15940K562FTO
GGT1ENSG00000100031.14106.39650186.64520-0.810804.199803.47710K562FXR1
GGT1ENSG00000100031.1413.3882052.06340-1.959302.137801.52770K562G3BP2
GGT1ENSG00000100031.14266.8849085.809901.6369014.0894012.27080K562GPKOW
GGT1ENSG00000100031.14230.5879095.172501.276607.732205.69480K562IGF2BP2
GGT1ENSG00000100031.14131.9370083.764200.655302.151801.37920K562METAP2
GGT1ENSG00000100031.14182.44200361.76360-0.987607.652705.15800K562NOL12
GGT1ENSG00000100031.14365.41980235.202800.635505.103304.13320K562NSUN2
GGT1ENSG00000100031.14318.12320187.444900.763002.623301.66590K562PABPN1
GGT1ENSG00000100031.14104.73900167.09160-0.673802.342001.57700K562PCBP3
GGT1ENSG00000100031.1469.21590128.16740-0.888903.393502.49960K562POLR2G
GGT1ENSG00000100031.14178.30270117.795000.598002.432001.66650K562PPIG
GGT1ENSG00000100031.14256.87230360.82140-0.490202.748401.93550K562PUF60
GGT1ENSG00000100031.14287.56510383.84600-0.416602.495001.48510K562PUM1
GGT1ENSG00000100031.14153.1436086.204000.829003.065101.34320K562SRP68
GGT1ENSG00000100031.14170.0899089.967800.918704.598903.18460K562SRSF5
GGT1ENSG00000100031.14166.0043092.994800.835903.816202.83300K562TIA1
GGT1ENSG00000100031.14157.6516091.261600.788603.168301.98670K562TRA2A
GGT1ENSG00000100031.14219.60530154.668100.505602.123201.31020K562TRIM56
GGT1ENSG00000100031.14206.0621088.376301.221206.832805.15230K562UCHL5
GGT1ENSG00000100031.14355.00870249.389700.509403.403402.61230K562UPF1
GGT1ENSG00000100031.14161.7163090.043900.844702.507101.37380K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GGT1 is not available on ENCORE database.





13 RBPs can affect the splicing of GGT1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEGGT1ENSG00000100031.14chr22+250230922502324525019746250198832502337625023586-0.051000.000440.01030excludedHepG2U2AF1
SEGGT1ENSG00000100031.14chr22+250059312500600025003920250039902500632425006498-0.386000.005730.05903excludedHepG2U2AF2
SEGGT1ENSG00000100031.14chr22+2500495625005198250039202500399025005931250060000.169000.000190.02389includedHepG2SRSF7
SEGGT1ENSG00000100031.14chr22+250049562500519825003920250039902500593125006000-0.089000.001280.08190excludedHepG2DDX3X
SEGGT1ENSG00000100031.14chr22+2500593125006000250039202500399025006324250064980.205000.000470.03259includedHepG2NCBP2
SEGGT1ENSG00000100031.14chr22+250049562500519825003920250039902500593125006000-0.123000.000590.01657excludedHepG2SRSF1
SEGGT1ENSG00000100031.14chr22+250230922502324525019746250198832502337625023586-0.146000.000880.06151excludedHepG2TIAL1
A3SSGGT1ENSG00000100031.14chr22+250233762502358625023398250235862501974625019883-0.155000.000000.00135shorterHepG2DROSHA
A3SSGGT1ENSG00000100031.14chr22+2502337625023586250233982502358625019746250198830.234000.000000.00001longerHepG2U2AF2
A3SSGGT1ENSG00000100031.14chr22+2502337625023586250233982502358625019746250198830.089000.000080.01921longerHepG2TIAL1
A3SSGGT1ENSG00000100031.14chr22+2502337625023586250233982502358625019746250198830.557000.000000.00006longerK562SF3B1
A3SSGGT1ENSG00000100031.14chr22+2502337625023586250233982502358625019746250198830.227000.000000.00000longerHepG2U2AF1
A3SSGGT1ENSG00000100031.14chr22+2502337625023586250233982502358625019746250198830.093000.000840.09360longerHepG2PCBP1
A3SSGGT1ENSG00000100031.14chr22+2502337625023586250233982502358625019746250198830.131000.000020.00337longerHepG2SF3B4
A5SSGGT1ENSG00000100031.14chr22+249991792499942724999179249992882500392025003990-0.197000.000370.04179shorterHepG2SRSF9
MXEGGT1ENSG00000100031.14chr22+25003920250039902500593125006000249991792499928825006324250064980.156000.002390.068631includedHepG2SUPV3L1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for GGT1 is not avaliable on ENCORE database.