GDPD5

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	GDPD5	ENSG00000158555.14	1.60	4.95	3.28	ENCSR000AEF
HepG2	GDPD5	ENSG00000158555.14	47.01	19.62	33.31	ENCSR985KAT
K562	GDPD5	ENSG00000158555.14	8.60	5.85	7.22	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for GDPD5 is not avaliable on ENCORE database.

Proteins bound to RNA

GDPD5 RNA is bound by 33 proteins.

eCLIP assay for GDPD5 is not avaliable on ENCORE database.

33 proteins are bound to GDPD5 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	75160927	75161041	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.14032	24.36960	HepG2	PPIG
chr11	75152263	75152285	-	3'-UTR,CDS,intron-Distal	4.21741	4.16554	HepG2	PPIG
chr11	75146095	75146204	-	3'-UTR,intron-Distal	5.50160	8.57616	HepG2	UPF1
chr11	75146151	75146187	-	3'-UTR,intron-Distal	3.77945	3.00640	HepG2	ZC3H11A
chr11	75148005	75148050	-	3'-UTR,CDS,intron-Distal	4.58197	6.09657	HepG2	LSM11
chr11	75190396	75190443	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.24000	7.30560	HepG2	NKRF
chr11	75145903	75146028	-	3'-UTR,intron-Distal,intron-Proximal	3.91273	9.23095	HepG2	PABPN1
chr11	75152154	75152215	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.11445	7.52888	HepG2	PRPF8
chr11	75146067	75146158	-	3'-UTR,intron-Distal	4.92080	6.92572	HepG2	AKAP1
chr11	75188795	75188892	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.64520	5.47851	K562	SF3B4
chr11	75146409	75146459	-	3'-UTR,intron-Distal	3.19234	3.52724	HepG2	PABPN1
chr11	75146095	75146212	-	3'-UTR,intron-Distal	3.42615	9.17095	HepG2	PABPN1
chr11	75160605	75160652	-	3'-UTR,5'-UTR,CDS,intron-Distal	3.32817	6.00907	HepG2	PPIG
chr11	75146370	75146524	-	3'-UTR,intron-Distal,intron-Proximal	3.86215	10.26100	HepG2	LSM11
chr11	75148010	75148055	-	3'-UTR,CDS,intron-Distal	5.26363	7.95724	HepG2	PPIG
chr11	75153617	75153698	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.24102	16.36174	HepG2	SF3A3
chr11	75188828	75188894	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	4.60536	6.30573	HepG2	SF3B4
chr11	75146607	75146687	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.17413	3.41569	HepG2	PABPN1
chr11	75201289	75201364	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.26623	6.49759	HepG2	DDX3X
chr11	75190443	75190477	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	4.15967	11.86825	HepG2	XPO5
chr11	75190443	75190482	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	4.36397	4.36138	HepG2	NKRF
chr11	75146395	75146522	-	3'-UTR,intron-Distal,intron-Proximal	3.00872	3.74115	HepG2	UCHL5
chr11	75148058	75148093	-	3'-UTR,CDS,intron-Distal	3.18796	7.17118	HepG2	PPIG
chr11	75146031	75146080	-	3'-UTR,intron-Distal	4.30154	4.78834	HepG2	PABPN1
chr11	75201242	75201329	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.52197	24.27286	HepG2	PRPF8
chr11	75201233	75201292	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.58059	4.23459	K562	PRPF8
chr11	75155471	75155503	-	3'-UTR,CDS,intron-Distal	3.62712	4.68902	HepG2	PPIG
chr11	75160997	75161031	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.80099	8.98750	HepG2	U2AF2
chr11	75148035	75148094	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.31440	5.15343	HepG2	PABPN1
chr11	75146138	75146270	-	3'-UTR,intron-Distal	3.60059	12.28209	HepG2	DDX55
chr11	75146353	75146499	-	3'-UTR,intron-Distal	5.46369	9.75816	HepG2	UPF1
chr11	75190507	75190559	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.87885	13.62547	HepG2	U2AF2
chr11	75148050	75148094	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.30828	5.73167	HepG2	LSM11
chr11	75145735	75146043	-	3'-UTR,intron-Distal,intron-Proximal	4.21917	12.00733	HepG2	UPF1
chr11	75152690	75152735	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.10974	7.84823	HepG2	PPIG
chr11	75146262	75146307	-	3'-UTR,intron-Distal	4.26149	4.20997	HepG2	UPF1
chr11	75190391	75190427	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	5.73553	60.19305	HepG2	XPO5
chr11	75190407	75190451	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.65182	4.61051	HepG2	DDX3X
chr11	75190427	75190443	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	6.10016	62.27230	HepG2	XPO5
chr11	75154142	75154213	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.74225	13.28834	HepG2	PRPF8
chr11	75161758	75161818	-	5'-UTR,intron-Distal	3.29119	4.15366	K562	DROSHA
chr11	75161763	75161832	-	5'-UTR,intron-Distal	3.79148	12.28128	HepG2	CSTF2T
chr11	75236502	75236594	-	5'-UTR,intron-Distal,intron-Proximal	4.49647	34.08100	HepG2	DDX3X
chr11	75163058	75163091	-	5'-UTR,intron-Distal	4.45556	7.43919	HepG2	XPO5
chr11	75163011	75163032	-	5'-UTR,intron-Distal	6.36594	11.78880	HepG2	XPO5
chr11	75163032	75163058	-	5'-UTR,intron-Distal	6.81443	17.30835	HepG2	XPO5
chr11	75161731	75161843	-	5'-UTR,intron-Distal	5.75412	15.17984	K562	DDX24
chr11	75161945	75162004	-	5'-UTR,intron-Distal	3.84961	6.23254	HepG2	PRPF4
chr11	75236406	75236470	-	5'-UTR,intron-Distal,intron-Proximal	3.63448	18.42485	HepG2	DDX3X
chr11	75236671	75236798	-	5'-UTR,intron-Distal	4.54636	39.85103	HepG2	DDX3X
chr11	75236824	75236895	-	5'-UTR,intron-Distal,intron-Proximal	4.28063	28.94777	HepG2	DDX3X
chr11	75161759	75161840	-	5'-UTR,intron-Distal	3.86932	6.22996	K562	CSTF2T
chr11	75161918	75162017	-	5'-UTR,intron-Distal	3.46469	7.46045	HepG2	CSTF2T
chr11	75162298	75162380	-	5'-UTR,intron-Distal,intron-Proximal	3.37377	6.76916	HepG2	HNRNPK
chr11	75161761	75161835	-	5'-UTR,intron-Distal	3.31013	3.30889	K562	GTF2F1
chr11	75161909	75161945	-	5'-UTR,intron-Distal	3.42164	4.59965	HepG2	PRPF4
chr11	75236328	75236395	-	5'-UTR,intron-Distal,intron-Proximal	4.11778	28.03082	HepG2	DDX3X
chr11	75161764	75161860	-	5'-UTR,intron-Distal	3.72828	12.80607	HepG2	NKRF
chr11	75236895	75236942	-	5'-UTR,intron-Distal,intron-Proximal	4.39440	18.74098	HepG2	DDX3X
chr11	75161758	75161842	-	5'-UTR,intron-Distal	4.13640	7.76457	HepG2	GTF2F1
chr11	75161762	75161909	-	5'-UTR,intron-Distal	4.55813	23.25459	HepG2	PRPF4
chr11	75161535	75161570	-	5'-UTR,intron-Distal	4.31836	4.59145	HepG2	XPO5
chr11	75161759	75161835	-	5'-UTR,intron-Distal	4.50603	6.74777	HepG2	CDC40
chr11	75161764	75161822	-	5'-UTR,intron-Distal	3.28788	6.99312	HepG2	EFTUD2
chr11	75161572	75161646	-	5'-UTR,intron-Distal	3.76545	3.46336	HepG2	SRSF1
chr11	75161937	75161983	-	5'-UTR,intron-Distal	4.26906	3.95534	HepG2	CDC40
chr11	75161785	75161851	-	5'-UTR,intron-Distal	3.42555	8.50939	HepG2	PTBP1
chr11	75168779	75168833	-	CDS,intron-Distal,intron-Proximal	3.77832	3.01428	K562	UCHL5
chr11	75168736	75168820	-	CDS,intron-Distal,intron-Proximal	3.59619	18.47216	HepG2	PPIG
chr11	75168787	75168831	-	CDS,intron-Distal	3.18869	5.66280	HepG2	GRWD1
chr11	75167748	75167823	-	CDS,intron-Distal,intron-Proximal	3.19178	13.83410	HepG2	PRPF8
chr11	75168734	75168799	-	CDS,intron-Distal,intron-Proximal	3.67956	4.82082	K562	ZNF622
chr11	75173850	75173892	-	CDS,intron-Distal	3.80841	5.40651	HepG2	PPIG
chr11	75173830	75173849	-	CDS,intron-Distal,intron-Proximal	4.31934	3.80193	HepG2	GRWD1
chr11	75167845	75167862	-	CDS,intron-Distal,intron-Proximal	4.43490	9.76012	HepG2	PPIG
chr11	75167806	75167861	-	CDS,intron-Distal	3.07059	6.04751	HepG2	GRWD1
chr11	75167795	75167845	-	CDS,intron-Distal,intron-Proximal	3.31432	8.77723	HepG2	PPIG
chr11	75190672	75190750	-	intron-Distal	4.79927	5.83981	HepG2	RBFOX2
chr11	75196975	75197036	-	intron-Distal	4.30736	3.71567	HepG2	RBFOX2
chr11	75194452	75194521	-	intron-Distal	3.19642	4.68402	HepG2	CSTF2T
chr11	75161348	75161435	-	intron-Distal,intron-Proximal	3.65517	5.80375	HepG2	PTBP1
chr11	75161272	75161317	-	intron-Distal	4.99287	20.14217	HepG2	PCBP2
chr11	75167243	75167320	-	intron-Distal	3.90754	3.58835	K562	HNRNPK
chr11	75150296	75150358	-	intron-Distal,intron-Proximal	3.52526	4.39142	HepG2	PCBP2
chr11	75148526	75148682	-	intron-Distal	4.18451	4.07750	HepG2	HNRNPK
chr11	75193496	75193582	-	intron-Distal	3.69345	5.05880	HepG2	NKRF
chr11	75196522	75196587	-	intron-Distal	4.30593	4.66266	K562	TARDBP
chr11	75153701	75153807	-	intron-Distal,intron-Proximal	4.83239	5.28859	HepG2	SF3B4
chr11	75167750	75167796	-	intron-Distal,intron-Proximal	4.18618	3.96535	HepG2	AQR
chr11	75165788	75165854	-	intron-Distal	3.54358	4.66833	HepG2	HNRNPL
chr11	75161338	75161407	-	intron-Distal,intron-Proximal	3.14737	6.99714	HepG2	CSTF2T
chr11	75235565	75235616	-	intron-Distal	3.27728	3.96999	HepG2	CSTF2T
chr11	75162311	75162364	-	intron-Distal,intron-Proximal	3.30175	7.61507	HepG2	CSTF2T
chr11	75167064	75167138	-	intron-Distal	3.14207	5.36578	HepG2	HNRNPK
chr11	75163495	75163621	-	intron-Distal	5.44214	18.85043	HepG2	HNRNPL
chr11	75150137	75150225	-	intron-Distal	3.66719	4.74917	HepG2	PCBP2
chr11	75188209	75188295	-	intron-Distal	5.03156	4.75034	HepG2	XPO5
chr11	75153793	75153835	-	intron-Distal,intron-Proximal	4.85422	5.60100	HepG2	PRPF8
chr11	75149846	75149902	-	intron-Distal,intron-Proximal	5.46074	6.42900	HepG2	PTBP1
chr11	75161196	75161272	-	intron-Distal	4.47777	19.77068	HepG2	PCBP2
chr11	75201554	75201644	-	intron-Distal	4.68918	6.37401	HepG2	RBFOX2
chr11	75160411	75160486	-	intron-Distal,intron-Proximal	3.88890	4.25134	HepG2	RBFOX2
chr11	75167241	75167344	-	intron-Distal	5.42076	8.24380	HepG2	HNRNPK
chr11	75196914	75196975	-	intron-Distal	4.00654	8.69108	HepG2	RBFOX2
chr11	75173712	75173816	-	intron-Distal,intron-Proximal	4.50072	9.49243	HepG2	EFTUD2
chr11	75161031	75161041	-	intron-Distal,intron-Proximal	4.58410	7.64877	HepG2	U2AF2
chr11	75192506	75192634	-	intron-Distal	4.13796	3.89149	HepG2	HNRNPK
chr11	75151009	75151068	-	intron-Distal,intron-Proximal	4.90453	6.80569	HepG2	SF3B4
chr11	75161382	75161413	-	intron-Distal,intron-Proximal	4.51216	4.03786	HepG2	NKRF
chr11	75193054	75193124	-	intron-Distal	3.87355	3.39169	HepG2	HNRNPU
chr11	75166899	75167001	-	intron-Distal	3.25998	8.10159	HepG2	HNRNPK
chr11	75167796	75167802	-	intron-Distal,intron-Proximal	3.94218	3.09957	HepG2	AQR
chr11	75161070	75161188	-	intron-Distal,intron-Proximal	5.08453	27.36324	HepG2	PCBP2
chr11	75197147	75197258	-	intron-Distal	3.33615	5.91000	HepG2	NKRF
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for GDPD5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for GDPD5 is not available on ENCORE database.
139 RBPs can affect the levels of GDPD5.

The Knockdown/knockout RNA-Seq assay for GDPD5 is not available on ENCORE database.

139 RBPs can affect the gene expression of GDPD5 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
GDPD5	ENSG00000158555.10	416.60920	962.69870	-1.20840	16.31910	14.05440	HepG2	AATF
GDPD5	ENSG00000158555.10	900.87020	1598.96470	-0.82770	23.92370	22.53440	HepG2	ACO1
GDPD5	ENSG00000158555.10	1183.34810	635.94230	0.89580	4.57490	3.33320	HepG2	ADAR
GDPD5	ENSG00000158555.10	264.85930	1696.14570	-2.67900	9.85830	8.92130	HepG2	AKAP1
GDPD5	ENSG00000158555.10	802.69870	1503.44690	-0.90530	3.12060	2.01630	HepG2	AKAP8
GDPD5	ENSG00000158555.10	1103.67540	1606.30660	-0.54140	10.15840	8.80020	HepG2	AKAP8L
GDPD5	ENSG00000158555.10	1377.82420	2518.49120	-0.87020	12.14640	10.88530	HepG2	AUH
GDPD5	ENSG00000158555.10	274.62530	698.96090	-1.34770	20.14210	18.74980	HepG2	BOP1
GDPD5	ENSG00000158555.10	272.78190	938.98410	-1.78340	32.65080	30.61380	HepG2	CALR
GDPD5	ENSG00000158555.10	648.85750	1333.23430	-1.03900	3.24100	2.40780	HepG2	CIRBP
GDPD5	ENSG00000158555.10	262.17810	1339.80200	-2.35340	5.23320	4.17600	HepG2	CNOT7
GDPD5	ENSG00000158555.10	335.95810	641.66830	-0.93350	9.79270	8.57600	HepG2	CPSF6
GDPD5	ENSG00000158555.10	937.92350	1416.18330	-0.59450	7.06810	5.37710	HepG2	CPSF7
GDPD5	ENSG00000158555.10	830.28800	652.16210	0.34830	3.05150	1.98030	HepG2	YBX3
GDPD5	ENSG00000158555.10	947.77760	501.82300	0.91730	9.12210	7.35330	HepG2	CSTF2
GDPD5	ENSG00000158555.10	505.74360	986.08920	-0.96330	8.51390	5.82230	HepG2	CSTF2T
GDPD5	ENSG00000158555.10	658.18590	1195.66130	-0.86120	18.15200	16.79640	HepG2	CELF1
GDPD5	ENSG00000158555.10	1100.21270	1285.71740	-0.22480	2.45240	1.74900	HepG2	DAZAP1
GDPD5	ENSG00000158555.10	2102.38940	1478.71900	0.50760	5.29610	4.19090	HepG2	DDX19B
GDPD5	ENSG00000158555.10	514.60190	653.05030	-0.34370	2.51500	1.41550	HepG2	DDX1
GDPD5	ENSG00000158555.10	348.66390	1061.21450	-1.60580	35.50560	33.48900	HepG2	DDX21
GDPD5	ENSG00000158555.10	445.25620	747.61410	-0.74770	2.56260	1.32230	HepG2	DDX27
GDPD5	ENSG00000158555.10	267.22200	1624.40420	-2.60380	9.69910	8.58970	HepG2	DDX3X
GDPD5	ENSG00000158555.10	1365.11770	2124.22460	-0.63790	8.78570	6.62940	HepG2	DDX47
GDPD5	ENSG00000158555.10	394.10230	799.27050	-1.02010	3.89590	2.99340	HepG2	DDX55
GDPD5	ENSG00000158555.10	597.44270	1311.09630	-1.13390	10.65490	8.82550	HepG2	DDX5
GDPD5	ENSG00000158555.10	216.60450	640.34350	-1.56380	31.43790	29.36060	HepG2	DNAJC21
GDPD5	ENSG00000158555.10	868.99970	634.73380	0.45310	6.14060	5.22590	HepG2	DNAJC2
GDPD5	ENSG00000158555.10	592.11450	985.31710	-0.73470	6.46670	4.76710	HepG2	EFTUD2
GDPD5	ENSG00000158555.10	626.15230	1341.40130	-1.09920	3.24630	2.60670	HepG2	EIF2S1
GDPD5	ENSG00000158555.10	252.11840	959.53750	-1.92820	24.43020	22.06260	HepG2	EIF3D
GDPD5	ENSG00000158555.10	478.31460	825.27040	-0.78690	6.80370	3.81290	HepG2	EIF3H
GDPD5	ENSG00000158555.10	704.35370	1481.98200	-1.07320	3.44840	2.73590	HepG2	EIF4A3
GDPD5	ENSG00000158555.10	816.06120	1443.72690	-0.82300	1.97200	1.38460	HepG2	EIF4B
GDPD5	ENSG00000158555.10	808.20110	1268.36330	-0.65020	12.04490	10.54240	HepG2	EIF4G1
GDPD5	ENSG00000158555.10	784.17700	1215.02450	-0.63170	7.03450	5.75960	HepG2	EIF4G2
GDPD5	ENSG00000158555.10	1725.75660	2891.73840	-0.74470	14.56780	13.36320	HepG2	ETF1
GDPD5	ENSG00000158555.10	717.14070	1562.29220	-1.12330	19.93870	17.85560	HepG2	EWSR1
GDPD5	ENSG00000158555.10	476.06490	1011.70630	-1.08760	16.44580	14.10860	HepG2	FASTKD2
GDPD5	ENSG00000158555.10	860.74150	1737.03050	-1.01300	11.29010	9.88540	HepG2	FIP1L1
GDPD5	ENSG00000158555.10	173.27850	642.80120	-1.89130	12.64840	10.53730	HepG2	FTO
GDPD5	ENSG00000158555.10	1531.94930	727.33750	1.07460	15.33610	13.94710	HepG2	GPKOW
GDPD5	ENSG00000158555.10	1030.64430	646.47870	0.67280	3.03730	2.36280	HepG2	HNRNPA1
GDPD5	ENSG00000158555.10	401.11150	719.10280	-0.84220	5.88210	4.89940	HepG2	HNRNPC
GDPD5	ENSG00000158555.10	1472.10010	714.94840	1.04190	7.72090	6.60210	HepG2	HNRNPF
GDPD5	ENSG00000158555.10	2459.25280	1406.63270	0.80590	5.61500	4.64770	HepG2	HNRNPK
GDPD5	ENSG00000158555.10	520.53000	694.11550	-0.41520	2.58520	1.97320	HepG2	HNRNPLL
GDPD5	ENSG00000158555.10	602.08230	1198.14850	-0.99280	13.52720	11.68760	HepG2	HNRNPM
GDPD5	ENSG00000158555.10	1312.83360	714.34750	0.87790	22.04810	20.45000	HepG2	HNRNPU
GDPD5	ENSG00000158555.10	1416.93190	704.00470	1.00900	19.87480	18.12530	HepG2	IGF2BP1
GDPD5	ENSG00000158555.10	415.54810	1410.21090	-1.76280	6.28240	5.30340	HepG2	IGF2BP2
GDPD5	ENSG00000158555.10	528.56610	729.67980	-0.46520	5.83730	4.80830	HepG2	ILF2
GDPD5	ENSG00000158555.10	784.07630	1505.23940	-0.94090	2.74450	2.11570	HepG2	MATR3
GDPD5	ENSG00000158555.10	526.16070	1004.15930	-0.93240	7.43940	5.80390	HepG2	METAP2
GDPD5	ENSG00000158555.10	403.73130	1405.31810	-1.79940	33.40210	31.13400	HepG2	MSI2
GDPD5	ENSG00000158555.10	923.43220	1180.17530	-0.35390	3.06710	1.78790	HepG2	NAA15
GDPD5	ENSG00000158555.10	943.50780	1274.91000	-0.43430	3.79480	2.90050	HepG2	NOL12
GDPD5	ENSG00000158555.10	657.53000	442.08230	0.57260	2.77710	1.31810	HepG2	NOLC1
GDPD5	ENSG00000158555.10	923.64570	615.49780	0.58550	5.24610	4.23010	HepG2	NSUN2
GDPD5	ENSG00000158555.10	600.96870	1371.15970	-1.19000	3.62650	2.80730	HepG2	PABPC4
GDPD5	ENSG00000158555.10	533.82050	707.06310	-0.40550	2.60740	1.78130	HepG2	PARN
GDPD5	ENSG00000158555.10	1602.69820	1398.09330	0.19690	1.93810	1.41540	HepG2	PCBP1
GDPD5	ENSG00000158555.10	1244.98020	637.13830	0.96630	17.46340	15.71960	HepG2	PPIL4
GDPD5	ENSG00000158555.10	558.12370	1239.79990	-1.15150	32.26590	30.19290	HepG2	PRPF4
GDPD5	ENSG00000158555.10	764.32220	1422.67300	-0.89640	16.66690	15.54210	HepG2	PTBP1
GDPD5	ENSG00000158555.10	2159.74330	1216.98870	0.82740	15.09850	13.85680	HepG2	PUF60
GDPD5	ENSG00000158555.10	974.95590	1291.85860	-0.40600	6.80170	5.95680	HepG2	PUM1
GDPD5	ENSG00000158555.10	1056.31670	1290.93280	-0.28940	2.52140	1.88100	HepG2	PUM2
GDPD5	ENSG00000158555.10	797.21230	1628.61930	-1.03060	25.79680	24.26840	HepG2	PUS1
GDPD5	ENSG00000158555.10	584.80230	1540.66040	-1.39750	40.98490	39.09140	HepG2	QKI
GDPD5	ENSG00000158555.10	190.62000	970.82780	-2.34850	6.18090	5.15260	HepG2	RAVER1
GDPD5	ENSG00000158555.10	865.18420	422.33820	1.03450	9.04750	5.89830	HepG2	RBM14
GDPD5	ENSG00000158555.10	1192.45440	1728.40090	-0.53550	4.94490	3.83960	HepG2	RBM15
GDPD5	ENSG00000158555.10	394.18730	2416.92200	-2.61620	119.13950	116.78740	HepG2	RBM22
GDPD5	ENSG00000158555.10	1704.05210	1398.29730	0.28520	2.10640	1.51210	HepG2	RBM25
GDPD5	ENSG00000158555.10	1677.58940	1190.53850	0.49470	3.62890	2.48630	HepG2	RBM27
GDPD5	ENSG00000158555.10	1215.27060	1583.24790	-0.38160	4.97390	4.28480	HepG2	NELFE
GDPD5	ENSG00000158555.10	2572.49280	1474.67190	0.80270	25.87570	24.33030	HepG2	RECQL
GDPD5	ENSG00000158555.10	644.55660	933.79090	-0.53480	4.92900	4.13550	HepG2	RPS19
GDPD5	ENSG00000158555.10	669.91710	1097.89840	-0.71270	3.37080	2.48760	HepG2	RPS2
GDPD5	ENSG00000158555.10	251.23520	609.37610	-1.27830	5.55750	4.47860	HepG2	RRP9
GDPD5	ENSG00000158555.10	670.50280	937.01690	-0.48280	4.02960	2.89790	HepG2	SERBP1
GDPD5	ENSG00000158555.10	936.96550	497.54610	0.91310	2.61620	1.31170	HepG2	SF1
GDPD5	ENSG00000158555.10	492.92900	687.01210	-0.47900	3.37540	2.60320	HepG2	SF3B1
GDPD5	ENSG00000158555.10	1982.80440	1481.07720	0.42080	7.25430	6.36930	HepG2	SF3B4
GDPD5	ENSG00000158555.10	1959.05140	1166.84370	0.74740	23.45150	21.81030	HepG2	SLBP
GDPD5	ENSG00000158555.10	573.21300	741.84280	-0.37200	3.77710	3.04530	HepG2	SMN1
GDPD5	ENSG00000158555.10	403.81380	993.08740	-1.29820	2.58080	1.65750	HepG2	SMNDC1
GDPD5	ENSG00000158555.10	1592.99690	947.76560	0.74900	3.40690	1.62270	HepG2	SND1
GDPD5	ENSG00000158555.10	378.21240	764.43050	-1.01520	6.31220	5.12040	HepG2	SNRNP70
GDPD5	ENSG00000158555.10	418.62200	2729.76050	-2.70510	128.23520	126.13270	HepG2	SRFBP1
GDPD5	ENSG00000158555.10	1011.27720	1545.96840	-0.61230	11.85330	11.02050	HepG2	SRSF1
GDPD5	ENSG00000158555.10	933.38510	1201.56480	-0.36440	4.44820	3.68770	HepG2	SRSF5
GDPD5	ENSG00000158555.10	1113.01570	702.46640	0.66390	7.21270	6.17140	HepG2	SRSF7
GDPD5	ENSG00000158555.10	708.54990	1257.76600	-0.82790	19.45850	18.23830	HepG2	SRSF9
GDPD5	ENSG00000158555.10	1686.22680	2369.96680	-0.49110	11.11860	10.22440	HepG2	SSB
GDPD5	ENSG00000158555.10	933.74150	1631.12850	-0.80480	2.61200	1.36390	HepG2	SSRP1
GDPD5	ENSG00000158555.10	331.47360	1159.74420	-1.80680	28.58620	25.58310	HepG2	STAU1
GDPD5	ENSG00000158555.10	839.01100	1366.53960	-0.70380	16.69280	15.37180	HepG2	SUCLG1
GDPD5	ENSG00000158555.10	897.78570	1650.53570	-0.87850	3.08160	1.67940	HepG2	SUGP2
GDPD5	ENSG00000158555.10	536.78830	1172.47950	-1.12710	16.69240	14.55140	HepG2	SUPT6H
GDPD5	ENSG00000158555.10	367.19260	795.51700	-1.11540	4.46180	3.63350	HepG2	SUPV3L1
GDPD5	ENSG00000158555.10	967.96640	1389.70010	-0.52170	7.31880	6.48210	HepG2	TAF15
GDPD5	ENSG00000158555.10	507.03540	700.33060	-0.46590	5.03030	4.31530	HepG2	TRIM56
GDPD5	ENSG00000158555.10	1658.42700	1188.89970	0.48010	5.56590	4.27390	HepG2	TUFM
GDPD5	ENSG00000158555.10	714.88320	1485.62010	-1.05530	13.12190	11.71710	HepG2	U2AF1
GDPD5	ENSG00000158555.10	416.53480	1366.34290	-1.71380	70.89040	68.43450	HepG2	UPF1
GDPD5	ENSG00000158555.10	378.51190	1319.15030	-1.80120	69.31310	66.96850	HepG2	UTP3
GDPD5	ENSG00000158555.10	1367.23160	783.10360	0.80390	5.19810	4.21250	HepG2	XRN2
GDPD5	ENSG00000158555.10	887.51040	1223.51490	-0.46320	7.51270	6.49380	HepG2	ZC3H8
GDPD5	ENSG00000158555.10	527.05450	1502.71550	-1.51150	71.06850	69.27390	HepG2	ZNF622
GDPD5	ENSG00000158555.10	214.46400	312.45850	-0.54290	2.80240	1.61330	K562	AARS
GDPD5	ENSG00000158555.10	1181.39760	869.82150	0.44160	4.08500	2.83970	K562	AKAP8
GDPD5	ENSG00000158555.10	492.74750	291.58000	0.75690	4.77350	3.49470	K562	BCLAF1
GDPD5	ENSG00000158555.10	341.55840	217.03470	0.65410	3.61200	2.61600	K562	BOP1
GDPD5	ENSG00000158555.10	679.21720	388.81290	0.80470	4.54270	3.13940	K562	CNOT7
GDPD5	ENSG00000158555.10	419.97340	230.74670	0.86390	7.63600	6.32560	K562	CPSF6
GDPD5	ENSG00000158555.10	348.31910	221.20680	0.65490	4.49820	3.10560	K562	CSTF2
GDPD5	ENSG00000158555.10	809.79840	593.03150	0.44940	4.57160	2.99440	K562	DDX21
GDPD5	ENSG00000158555.10	373.92080	255.70260	0.54820	2.93930	1.57180	K562	DDX27
GDPD5	ENSG00000158555.10	412.70280	290.56150	0.50620	2.12870	1.32750	K562	EFTUD2
GDPD5	ENSG00000158555.10	648.41170	493.65370	0.39330	3.46710	2.09810	K562	EIF2S1
GDPD5	ENSG00000158555.10	522.36210	376.61840	0.47180	3.74540	2.93130	K562	EIF2S2
GDPD5	ENSG00000158555.10	976.76960	743.01260	0.39450	3.38140	2.34580	K562	EIF4G2
GDPD5	ENSG00000158555.10	423.74340	296.70460	0.51410	3.12270	2.21840	K562	FIP1L1
GDPD5	ENSG00000158555.10	205.54930	296.96810	-0.53080	2.48730	1.42640	K562	FKBP4
GDPD5	ENSG00000158555.10	328.18550	234.82480	0.48280	2.35340	1.56290	K562	FMR1
GDPD5	ENSG00000158555.10	312.53000	199.05500	0.65070	3.57680	2.52610	K562	FTO
GDPD5	ENSG00000158555.10	306.73820	488.29430	-0.67070	6.31850	5.45930	K562	FXR1
GDPD5	ENSG00000158555.10	55.46440	156.86360	-1.49990	7.75770	6.44880	K562	G3BP2
GDPD5	ENSG00000158555.10	686.78270	459.30270	0.58030	6.28810	4.60730	K562	GLRX3
GDPD5	ENSG00000158555.10	511.60170	220.28750	1.21550	14.18270	12.35000	K562	GPKOW
GDPD5	ENSG00000158555.10	847.89870	501.83940	0.75660	8.43600	7.10360	K562	GRSF1
GDPD5	ENSG00000158555.10	822.56340	592.30890	0.47370	4.85320	3.65870	K562	HNRNPU
GDPD5	ENSG00000158555.10	498.85040	273.18500	0.86860	4.76960	3.26380	K562	IGF2BP2
GDPD5	ENSG00000158555.10	388.64750	277.78070	0.48440	2.60850	1.46190	K562	IGF2BP3
GDPD5	ENSG00000158555.10	406.57220	286.28110	0.50600	3.38960	2.35420	K562	MATR3
GDPD5	ENSG00000158555.10	318.21060	215.03310	0.56530	3.09580	2.16680	K562	METAP2
GDPD5	ENSG00000158555.10	727.53660	482.89820	0.59120	7.36810	6.10340	K562	MTPAP
GDPD5	ENSG00000158555.10	817.07670	536.53600	0.60670	9.29240	8.03330	K562	NSUN2
GDPD5	ENSG00000158555.10	594.18710	373.53800	0.66960	3.64900	2.21220	K562	PABPC1
GDPD5	ENSG00000158555.10	767.86550	523.77670	0.55180	4.04780	3.04170	K562	PCBP3
GDPD5	ENSG00000158555.10	568.97960	401.76260	0.50190	3.82430	2.87650	K562	POLR2G
GDPD5	ENSG00000158555.10	489.48400	306.37870	0.67580	5.33390	4.02290	K562	PSIP1
GDPD5	ENSG00000158555.10	695.51980	862.43940	-0.31030	2.62720	1.58980	K562	PUM1
GDPD5	ENSG00000158555.10	630.65850	354.21850	0.83210	2.99480	1.41290	K562	SBDS
GDPD5	ENSG00000158555.10	680.32460	529.43500	0.36170	3.01940	2.17030	K562	SF3A3
GDPD5	ENSG00000158555.10	842.07680	410.63010	1.03600	5.32240	3.27490	K562	SFPQ
GDPD5	ENSG00000158555.10	407.12060	258.16450	0.65710	2.29780	1.35670	K562	SRSF5
GDPD5	ENSG00000158555.10	280.39010	402.96730	-0.52320	3.51470	2.58920	K562	SYNCRIP
GDPD5	ENSG00000158555.10	482.98840	276.54030	0.80440	4.26690	3.38220	K562	TARDBP
GDPD5	ENSG00000158555.10	517.01030	266.76780	0.95450	10.75080	9.01830	K562	TIA1
GDPD5	ENSG00000158555.10	473.13320	261.89970	0.85310	7.84160	5.75610	K562	TRA2A
GDPD5	ENSG00000158555.10	532.48740	313.18800	0.76560	6.74400	5.12110	K562	TRIM56
GDPD5	ENSG00000158555.10	857.27700	666.03400	0.36410	3.70470	2.22340	K562	TROVE2
GDPD5	ENSG00000158555.10	79.83990	151.94090	-0.92830	2.56450	1.51790	K562	U2AF1
GDPD5	ENSG00000158555.10	87.68320	156.95820	-0.84000	3.88800	2.93610	K562	U2AF2
GDPD5	ENSG00000158555.10	464.28520	289.64510	0.68060	4.36480	3.05890	K562	UCHL5
GDPD5	ENSG00000158555.10	866.56400	568.90100	0.60700	8.85870	7.66180	K562	UPF1
GDPD5	ENSG00000158555.10	739.38830	486.78970	0.60290	6.12420	4.78990	K562	WDR3
GDPD5	ENSG00000158555.10	665.64310	506.21130	0.39490	3.88690	2.89500	K562	WDR43
GDPD5	ENSG00000158555.10	951.29210	739.64930	0.36290	2.88700	1.56410	K562	WRN
GDPD5	ENSG00000158555.10	442.47020	295.08530	0.58430	3.12520	1.81240	K562	XRN2
GDPD5	ENSG00000158555.10	1024.62070	703.04230	0.54330	5.60020	4.30040	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for GDPD5 is not available on ENCORE database.

12 RBPs can affect the splicing of GDPD5 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	GDPD5	ENSG00000158555.10	chr11	-	75190288	75190533			75188663	75188840	75201281	75201365	-0.75300	0.00102	0.02120	excluded	K562	SRSF1
SE	GDPD5	ENSG00000158555.10	chr11	-	75163860	75164015			75160929	75161028	75167801	75167861	0.42500	0.00059	0.01747	included	HepG2	HNRNPK
SE	GDPD5	ENSG00000158555.10	chr11	-	75190288	75190533			75188663	75188840	75201281	75201365	-0.32300	0.00116	0.07723	excluded	HepG2	DDX3X
SE	GDPD5	ENSG00000158555.10	chr11	-	75153818	75153876			75153407	75153626	75154180	75154331	0.14700	0.00007	0.00181	included	K562	PUS1
SE	GDPD5	ENSG00000158555.10	chr11	-	75190288	75190533			75188663	75188840	75201281	75201365	0.26700	0.00223	0.08143	included	HepG2	SFPQ
SE	GDPD5	ENSG00000158555.10	chr11	-	75150923	75151006			75147980	75148093	75152207	75152355	-0.10300	0.00100	0.04270	excluded	HepG2	MATR3
SE	GDPD5	ENSG00000158555.10	chr11	-	75163860	75164015			75160929	75161028	75167801	75167861	-0.18900	0.00000	0.00002	excluded	HepG2	SRSF1
SE	GDPD5	ENSG00000158555.10	chr11	-	75190288	75190533			75188663	75188840	75201281	75201365	-0.55100	0.00000	0.00003	excluded	HepG2	SRSF1
SE	GDPD5	ENSG00000158555.10	chr11	-	75163860	75164015			75160929	75161028	75167801	75167861	-0.13900	0.00119	0.05499	excluded	HepG2	PCBP1
SE	GDPD5	ENSG00000158555.10	chr11	-	75150923	75151006			75147980	75148093	75152207	75152355	-0.12500	0.00040	0.02358	excluded	HepG2	PCBP1
SE	GDPD5	ENSG00000158555.10	chr11	-	75190288	75190533			75188663	75188840	75201281	75201365	-0.37100	0.00028	0.07144	excluded	HepG2	NOL12
SE	GDPD5	ENSG00000158555.10	chr11	-	75190288	75190533			75188663	75188840	75201281	75201365	-0.24100	0.00097	0.04506	excluded	HepG2	SF3B4
A3SS	GDPD5	ENSG00000158555.10	chr11	-	75152690	75152923			75152690	75152848	75153407	75153626	0.12100	0.00097	0.03953	longer	HepG2	U2AF1
MXE	GDPD5	ENSG00000158555.10	chr11	-	75173830	75173934	75188663	75188840	75168737	75168831	75201281	75201365	0.22800	0.00001	0.00600	1included	HepG2	LARP7
MXE	GDPD5	ENSG00000158555.10	chr11	-	75173830	75173934	75188663	75188840	75168737	75168831	75201281	75201365	0.24300	0.00063	0.05976	1included	HepG2	HNRNPM

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

GDPD5

General Information

Functions

Localization

Domains (AlphaFold: GDPD5)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for GDPD5 is not avaliable on ENCORE database.

33 proteins are bound to GDPD5 RNA:

eCLIP assay for GDPD5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for GDPD5 is not available on ENCORE database.

139 RBPs can affect the gene expression of GDPD5 :

The Knockdown/knockout RNA-Seq assay for GDPD5 is not available on ENCORE database.

12 RBPs can affect the splicing of GDPD5 :

The Knockdown/knockout RNA-Seq assay for GDPD5 is not avaliable on ENCORE database.