FN3K

General Information

Gene Name       : FN3K
Gene ID             : ENSG00000167363.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FN3K)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878FN3KENSG00000167363.130.000.000.00ENCSR000AEF
HepG2FN3KENSG00000167363.1337.6619.1028.38ENCSR985KAT
K562FN3KENSG00000167363.137.695.776.73ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for FN3K is not avaliable on ENCORE database.



Proteins bound to RNA
  • FN3K RNA is bound by 31 proteins.  







eCLIP assay for FN3K is not avaliable on ENCORE database.





31 proteins are bound to FN3K RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr178070889680708963+3'-UTR5.293008.50174K562HNRNPK
chr178070863680708780+3'-UTR7.98803190.38012HepG2PCBP2
chr178070899580709060+3'-UTR8.03561101.91690HepG2PCBP2
chr178070879680708843+3'-UTR4.683065.59077K562ILF3
chr178070869580708774+3'-UTR8.12749162.18131HepG2DDX59
chr178070898880709059+3'-UTR3.353467.74417HepG2DROSHA
chr178070877480708787+3'-UTR7.2100754.78876HepG2DDX59
chr178070867180708763+3'-UTR3.515555.00851HepG2LARP4
chr178070869180708774+3'-UTR5.1090721.89527HepG2CSTF2T
chr178070878980708814+3'-UTR6.1881130.10478HepG2PCBP2
chr178070891380708961+3'-UTR4.941527.75663K562CSTF2T
chr178070871780708778+3'-UTR6.60764400.00000HepG2HNRNPK
chr178070899980709044+3'-UTR4.556195.01332HepG2GTF2F1
chr178070878780708865+3'-UTR8.42112110.95435HepG2DDX59
chr178070898280709060+3'-UTR3.7938716.69711HepG2ILF3
chr178070899380709068+3'-UTR4.1711418.80005K562CSTF2T
chr178070888480708966+3'-UTR7.64445122.11660HepG2DDX59
chr178070870580708784+3'-UTR4.3156810.85555K562HNRNPK
chr178070899580709047+3'-UTR4.035145.24056K562GTF2F1
chr178070861680708787+3'-UTR,CDS4.9641717.61186HepG2PCBP1
chr178070899380709051+3'-UTR5.5306619.35526K562HNRNPK
chr178070888280708951+3'-UTR4.9247717.51966K562DROSHA
chr178070899880709067+3'-UTR7.1120939.60167K562ILF3
chr178070898580709051+3'-UTR4.7730941.67018K562DROSHA
chr178070858180708757+3'-UTR,CDS3.7425724.70925K562PCBP1
chr178070865680708695+3'-UTR5.6579426.44752HepG2DDX59
chr178070878580708853+3'-UTR4.0909627.91736K562DROSHA
chr178070869280708778+3'-UTR3.1580720.37091K562DROSHA
chr178070890680708961+3'-UTR5.129187.72686K562ILF3
chr178070877980708847+3'-UTR4.732787.10319HepG2CSTF2T
chr178070880080708849+3'-UTR5.248378.50174K562HNRNPK
chr178070889680708966+3'-UTR4.7402711.39119HepG2CSTF2T
chr178070899180709045+3'-UTR3.563306.03728K562PCBP1
chr178070897680709049+3'-UTR5.7548157.13656HepG2HNRNPK
chr178070870480708766+3'-UTR4.8655615.85434K562ILF3
chr178070898480709053+3'-UTR4.8046918.13697HepG2CSTF2T
chr178070888880708966+3'-UTR7.0576381.69293HepG2PCBP2
chr178070871080708768+3'-UTR4.735093.30705HepG2GTF2F1
chr178070888380708976+3'-UTR6.0849461.97547HepG2HNRNPK
chr178070881480708856+3'-UTR6.8293649.19378HepG2PCBP2
chr178070899980709059+3'-UTR3.874537.24550HepG2XRN2
chr178070864580708717+3'-UTR6.3490683.95845HepG2HNRNPK
chr178070877880708855+3'-UTR6.3292160.08344HepG2HNRNPK
chr178070897980709061+3'-UTR8.19513256.35762HepG2DDX59
chr178069347980693632+5'-UTR,CDS4.664916.82597K562DDX3X
chr178070675080706836+CDS3.202904.79633HepG2G3BP1
chr178069364480693699+CDS,intron-Proximal3.619065.73990HepG2PRPF8
chr178069863980698683+CDS3.370197.72558K562CSTF2T
chr178069922180699282+CDS,intron-Proximal3.193399.76148HepG2PPIG
chr178069922080699277+CDS,intron-Proximal3.073686.17838K562ZNF622
chr178069645180696517+CDS,intron-Proximal3.613883.69481K562UCHL5
chr178069866880698694+CDS3.037414.64055K562GRWD1
chr178070846580708542+CDS3.459656.93757K562CSTF2T
chr178070834280708353+CDS4.194423.43867K562CSTF2T
chr178069918280699221+CDS,intron-Proximal4.596428.98365HepG2PPIG
chr178069636380696373+CDS,intron-Proximal3.945938.08045K562YBX3
chr178070854880708615+CDS3.8084811.71215K562ILF3
chr178070856680708607+CDS3.068604.77516HepG2CSTF2T
chr178069864180698768+CDS,intron-Proximal3.3883811.99332K562UCHL5
chr178070830480708386+CDS3.103593.26655HepG2LSM11
chr178070854280708614+CDS4.0065713.11755K562CSTF2T
chr178070854880708603+CDS4.392294.01795HepG2LARP4
chr178070680780706905+CDS,intron-Proximal3.2078111.13321HepG2PRPF8
chr178069645180696517+CDS,intron-Proximal3.174134.91547HepG2GRWD1
chr178069868380698731+CDS,intron-Proximal3.141649.16318K562CSTF2T
chr178069646880696519+CDS,intron-Proximal4.079723.44423K562BUD13
chr178069925480699314+CDS,intron-Proximal3.513027.83009HepG2PRPF8
chr178069644680696517+CDS,intron-Proximal3.379058.33070HepG2PPIG
chr178070831380708374+CDS4.724636.57313K562RBM15
chr178070845480708518+CDS3.423307.33428K562ILF3
chr178069643980696508+CDS4.283049.51280K562CSTF2T
chr178069867180698687+CDS3.059076.81934HepG2GRWD1
chr178069866380698732+CDS,intron-Proximal4.7666211.54096HepG2BCLAF1
chr178069920480699304+CDS,intron-Proximal3.048477.95067HepG2GRWD1
chr178070832080708378+CDS5.652555.44904HepG2RPS3
chr178069637980696432+CDS3.081684.86139HepG2CSTF2T
chr178069863680698732+CDS,intron-Proximal3.558763.95463K562ZNF800
chr178069364680693654+CDS,intron-Proximal3.392016.74819K562YBX3
chr178070672780706807+CDS,intron-Proximal3.970123.15006K562RBM15
chr178070823480708307+CDS,intron-Proximal3.600695.00060HepG2SF3B4
chr178070854780708600+CDS3.519725.07173K562HNRNPK
chr178070840180708441+CDS4.121073.21228K562TIA1
chr178070854380708609+CDS4.028175.77902K562PABPC4
chr178069363480693646+CDS3.426597.18470K562YBX3
chr178069922280699271+CDS,intron-Proximal3.569965.14242HepG2G3BP1
chr178069585580695956+intron-Distal4.020033.20376K562XRN2
chr178069369280693819+intron-Distal,intron-Proximal5.2274234.58316HepG2EFTUD2
chr178069371480693823+intron-Distal,intron-Proximal5.246557.72419HepG2NKRF
chr178069881280698917+intron-Distal,intron-Proximal3.225113.68839K562KHSRP
chr178069370680693815+intron-Distal,intron-Proximal3.586466.71630HepG2PRPF4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for FN3K is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FN3K is not available on ENCORE database.

  • 109 RBPs can affect the levels of FN3K.  








The Knockdown/knockout RNA-Seq assay for FN3K is not available on ENCORE database.





109 RBPs can affect the gene expression of FN3K :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FN3KENSG00000167363.91390.24970887.816100.646903.927502.81930HepG2ABCF1
FN3KENSG00000167363.9359.35910679.33500-0.9187015.9990014.79260HepG2ACO1
FN3KENSG00000167363.9469.08310274.203300.774506.338704.91080HepG2ADAR
FN3KENSG00000167363.9467.21910815.22320-0.803106.147805.39090HepG2AKAP1
FN3KENSG00000167363.9715.21590946.77430-0.404604.363103.53570HepG2AUH
FN3KENSG00000167363.9926.20730664.938600.478003.966402.49970HepG2BUD13
FN3KENSG00000167363.9351.24530532.87620-0.601302.422701.69720HepG2CALR
FN3KENSG00000167363.9901.52920640.816600.492403.614702.73950HepG2CIRBP
FN3KENSG00000167363.9959.73000679.215400.498707.493306.49950HepG2CKAP4
FN3KENSG00000167363.9304.72680481.03410-0.658603.231702.40010HepG2CNOT7
FN3KENSG00000167363.9639.83200957.09470-0.581004.479003.62250HepG2CPSF6
FN3KENSG00000167363.9403.03810281.203100.519203.652902.48270HepG2YBX3
FN3KENSG00000167363.9419.20280271.427600.627002.960101.84930HepG2CSTF2
FN3KENSG00000167363.9217.02660376.31060-0.794104.566702.66980HepG2CSTF2T
FN3KENSG00000167363.9514.02280636.94010-0.309302.164201.58470HepG2CELF1
FN3KENSG00000167363.9769.73630628.300500.292802.773201.93860HepG2DDX19B
FN3KENSG00000167363.9394.41140281.574200.486103.167801.93330HepG2DDX1
FN3KENSG00000167363.9251.17220432.29800-0.783303.208602.38480HepG2DDX55
FN3KENSG00000167363.9459.73740266.299100.787705.786004.40420HepG2DHX30
FN3KENSG00000167363.9953.62140649.946800.553007.466906.45530HepG2DKC1
FN3KENSG00000167363.9403.85710273.696100.561205.127204.28340HepG2DNAJC2
FN3KENSG00000167363.9675.74050450.813200.583804.095102.99700HepG2EEF2
FN3KENSG00000167363.9224.84330365.92430-0.702604.608503.46360HepG2EIF3D
FN3KENSG00000167363.9553.64130382.795100.532304.236602.93470HepG2EIF3G
FN3KENSG00000167363.91083.66550712.438100.605004.717303.88500HepG2EIF4A3
FN3KENSG00000167363.9242.30490386.27170-0.672804.165102.80290HepG2FASTKD2
FN3KENSG00000167363.9461.66880896.42010-0.9573010.173708.82260HepG2FIP1L1
FN3KENSG00000167363.9474.02990616.35690-0.378802.501201.75230HepG2FUBP3
FN3KENSG00000167363.9912.70500719.197000.343701.965101.37800HepG2FXR1
FN3KENSG00000167363.91057.46120708.325100.578004.359803.23010HepG2G3BP2
FN3KENSG00000167363.91431.921601084.846400.400402.672202.04120HepG2GPKOW
FN3KENSG00000167363.9430.23880278.735800.626103.394102.68750HepG2HNRNPA1
FN3KENSG00000167363.9752.45960310.056601.279005.205604.27780HepG2HNRNPC
FN3KENSG00000167363.9937.64280510.985200.8757016.7143015.14700HepG2HNRNPF
FN3KENSG00000167363.9467.29480675.82270-0.532302.784702.08360HepG2HNRNPK
FN3KENSG00000167363.91744.408401035.297500.752609.671408.57430HepG2HNRNPLL
FN3KENSG00000167363.9471.91570308.005600.615505.983605.12050HepG2HNRNPU
FN3KENSG00000167363.9622.63330954.12390-0.615802.662001.45880HepG2HSPD1
FN3KENSG00000167363.9969.94150503.172300.9467015.8259014.24910HepG2IGF2BP1
FN3KENSG00000167363.91070.75110677.882300.659406.296505.31550HepG2IGF2BP2
FN3KENSG00000167363.9314.07950636.44720-1.018903.910902.74210HepG2IGF2BP3
FN3KENSG00000167363.9657.13070458.433400.519403.086401.81260HepG2KHDRBS1
FN3KENSG00000167363.91046.95680681.965600.618304.325803.04440HepG2KHSRP
FN3KENSG00000167363.91679.15500906.349300.889507.914506.50130HepG2LARP4
FN3KENSG00000167363.9985.76740719.449800.454303.126902.43000HepG2MAGOH
FN3KENSG00000167363.9234.26340382.94770-0.709002.270001.31620HepG2METAP2
FN3KENSG00000167363.9588.59860725.23470-0.301202.033101.33490HepG2MSI2
FN3KENSG00000167363.91367.85520740.405800.8854010.618409.41750HepG2NCBP2
FN3KENSG00000167363.9633.70290392.340400.691603.789602.11090HepG2NOLC1
FN3KENSG00000167363.91580.59720918.058200.783707.251606.07690HepG2NSUN2
FN3KENSG00000167363.9207.47400304.85460-0.555203.484402.54460HepG2PARN
FN3KENSG00000167363.9734.10500382.558000.940205.566804.13250HepG2PCBP2
FN3KENSG00000167363.9420.85460302.616700.475703.068801.77180HepG2PKM
FN3KENSG00000167363.9576.39230274.713801.069005.055404.08730HepG2PPIL4
FN3KENSG00000167363.9550.58580748.22850-0.442503.341502.75150HepG2PTBP1
FN3KENSG00000167363.91071.58660648.256500.725009.447608.43600HepG2PUF60
FN3KENSG00000167363.9550.80790688.16130-0.321202.922402.31640HepG2PUM1
FN3KENSG00000167363.9846.44110691.950900.290602.624102.01990HepG2PUS1
FN3KENSG00000167363.9708.512001000.00730-0.497105.224204.09000HepG2RBM15
FN3KENSG00000167363.9448.90030908.58770-1.0172018.5295017.42990HepG2RBM22
FN3KENSG00000167363.9592.73990735.38490-0.311101.868301.30540HepG2RBM25
FN3KENSG00000167363.9520.51170358.887400.536302.676501.63690HepG2RCC2
FN3KENSG00000167363.9635.33180832.66250-0.390203.459702.86940HepG2NELFE
FN3KENSG00000167363.9943.51920775.591700.282702.588301.98920HepG2RECQL
FN3KENSG00000167363.91007.61540550.490100.872109.735908.58580HepG2RPLP0
FN3KENSG00000167363.9879.43070362.807701.277307.702006.19520HepG2RPS10
FN3KENSG00000167363.9607.66310407.556000.576203.560102.65480HepG2RPS2
FN3KENSG00000167363.9908.36990483.103800.910808.081306.73470HepG2RPS3A
FN3KENSG00000167363.9453.49350274.284000.725307.787406.78700HepG2SAFB2
FN3KENSG00000167363.9647.32800454.924400.508802.841901.51460HepG2SART3
FN3KENSG00000167363.91273.772201024.685200.313802.045601.43380HepG2SF3B1
FN3KENSG00000167363.9563.76200778.90750-0.466404.625803.89110HepG2SF3B4
FN3KENSG00000167363.9319.765801026.19460-1.6822055.0958053.60060HepG2SRFBP1
FN3KENSG00000167363.9471.64270813.04960-0.7856011.8401011.00790HepG2SRSF1
FN3KENSG00000167363.9790.96750502.033900.655709.291008.14500HepG2SRSF7
FN3KENSG00000167363.91311.49240890.941700.557709.810108.95900HepG2SSB
FN3KENSG00000167363.91788.423301009.346300.825207.991106.84230HepG2TARDBP
FN3KENSG00000167363.91839.81000934.119300.977802.680401.62800HepG2TBRG4
FN3KENSG00000167363.9896.54300299.230501.5830037.2551035.80620HepG2TIAL1
FN3KENSG00000167363.9421.85240301.963900.482303.855203.21190HepG2TRIM56
FN3KENSG00000167363.9798.72740633.332800.334602.348201.55050HepG2TUFM
FN3KENSG00000167363.9940.00650670.381800.487603.227202.32420HepG2UBE2L3
FN3KENSG00000167363.9385.50350254.124200.601103.067802.27000HepG2UCHL5
FN3KENSG00000167363.91200.078901009.310800.249702.478401.81130HepG2UPF1
FN3KENSG00000167363.9601.98640393.802100.612202.456301.51350HepG2UPF2
FN3KENSG00000167363.9164.49320302.19050-0.877403.866202.44400K562AARS
FN3KENSG00000167363.9772.44330457.108900.756803.163601.84050K562ABCF1
FN3KENSG00000167363.9625.92590497.019400.332602.203301.33700K562AKAP8
FN3KENSG00000167363.9729.95690470.619400.633206.367705.34710K562AKAP8L
FN3KENSG00000167363.9591.26110410.963300.524703.583702.93260K562AQR
FN3KENSG00000167363.9703.20800493.812200.509905.533604.18910K562ATP5C1
FN3KENSG00000167363.9370.51160263.661700.490703.080402.07140K562BCLAF1
FN3KENSG00000167363.9632.67860446.664100.502203.052601.52890K562CKAP4
FN3KENSG00000167363.9959.57560658.344400.543503.646002.52540K562CELF1
FN3KENSG00000167363.9765.98820530.639400.529504.709202.77330K562DDX19B
FN3KENSG00000167363.9829.83390529.178800.649005.803904.01050K562DDX21
FN3KENSG00000167363.9529.95660260.871801.022405.303303.34050K562DHX30
FN3KENSG00000167363.9206.25120319.86620-0.633104.477703.58990K562EIF2S2
FN3KENSG00000167363.9742.38240535.226200.471902.834801.88550K562EIF4G2
FN3KENSG00000167363.9189.92700339.68210-0.838706.892505.99800K562FXR1
FN3KENSG00000167363.952.18720140.71960-1.431103.414602.61330K562G3BP2
FN3KENSG00000167363.9719.19410526.799200.449004.150502.76370K562GLRX3
FN3KENSG00000167363.91150.90040637.111000.853005.590603.08000K562HNRNPA0
FN3KENSG00000167363.9570.83670404.270900.497703.978802.69160K562HNRNPA1
FN3KENSG00000167363.9709.79490330.394501.1031015.0437013.73740K562HNRNPC
FN3KENSG00000167363.991.90620190.65620-1.052705.352203.59090K562HNRNPK
FN3KENSG00000167363.9336.89450190.839700.819803.384202.20550K562IGF2BP2
FN3KENSG00000167363.9319.82960194.127500.720205.104303.39400K562IGF2BP3
FN3KENSG00000167363.9639.87480499.409400.357502.509701.72750K562KIF1C
FN3KENSG00000167363.9196.51010320.28920-0.704802.997301.54260K562LARP7
FN3KENSG00000167363.9914.03620615.395800.570603.816402.95560K562NSUN2
FN3KENSG00000167363.9116.70350257.51520-1.141805.746004.66290K562PRPF8
FN3KENSG00000167363.9117.32170194.90060-0.732303.843903.07270K562PTBP1
FN3KENSG00000167363.9607.85070454.743000.418603.464602.81330K562RBM15
FN3KENSG00000167363.9563.06150404.267300.477903.189601.45560K562RBM17
FN3KENSG00000167363.9378.58190266.266800.507602.743101.69900K562SRSF4
FN3KENSG00000167363.9261.11900180.432200.533202.645301.62280K562SRSF5
FN3KENSG00000167363.9235.68370367.51080-0.640904.643703.57280K562SYNCRIP
FN3KENSG00000167363.9381.11430193.378400.978708.414907.09440K562TARDBP
FN3KENSG00000167363.9297.32600186.532600.672504.171903.13500K562TIA1
FN3KENSG00000167363.9269.12110183.019000.556202.618801.56040K562TRA2A
FN3KENSG00000167363.971.50800136.19290-0.929502.771601.67830K562U2AF1
FN3KENSG00000167363.981.60740140.72640-0.786102.236701.51540K562U2AF2
FN3KENSG00000167363.9778.58120558.338900.479604.243503.15080K562WDR3
FN3KENSG00000167363.9761.27270462.857800.717703.203102.26640K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for FN3K is not available on ENCORE database.





1 RBPs can affect the splicing of FN3K :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
MXEFN3KENSG00000167363.9chr17+8069918680699269807067308070685380698638806987308070829280709073-0.181000.004250.078402includedK562TARDBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for FN3K is not avaliable on ENCORE database.