ECI2

General Information

Gene Name : ECI2
Gene ID : ENSG00000198721.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ECI2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ECI2	ENSG00000198721.12	62.69	49.86	56.27	ENCSR000AEF
HepG2	ECI2	ENSG00000198721.12	133.66	185.39	159.52	ENCSR985KAT
K562	ECI2	ENSG00000198721.12	129.64	153.27	141.45	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ECI2 is not avaliable on ENCORE database.

Proteins bound to RNA

ECI2 RNA is bound by 20 proteins.

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eCLIP assay for ECI2 is not avaliable on ENCORE database.

20 proteins are bound to ECI2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	4116039	4116094	-	3'-UTR,intron-Distal	5.88478	48.97877	K562	TROVE2
chr6	4116094	4116115	-	3'-UTR,CDS,intron-Distal	6.98532	47.29240	K562	TROVE2
chr6	4115957	4116060	-	3'-UTR,intron-Distal	5.33299	23.19430	K562	PABPC4
chr6	4135743	4135806	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.47221	17.91151	K562	DDX3X
chr6	4133867	4133946	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.21429	16.95413	K562	DDX3X
chr6	4119480	4119494	-	3'-UTR,CDS,intron-Distal	4.00958	15.21546	K562	YBX3
chr6	4131050	4131153	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.66281	14.36417	HepG2	BUD13
chr6	4116115	4116158	-	3'-UTR,CDS,intron-Distal	4.94493	13.78955	K562	TROVE2
chr6	4119444	4119480	-	3'-UTR,CDS,intron-Distal	3.60713	12.55809	K562	YBX3
chr6	4135665	4135774	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.02969	11.72792	HepG2	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 43 entries

eCLIP assay for ECI2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ECI2 is not available on ENCORE database.
128 RBPs can affect the levels of ECI2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ECI2 is not available on ENCORE database.

128 RBPs can affect the gene expression of ECI2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ECI2	ENSG00000198721.8	8745.58230	3782.75420	1.20900	88.48740	86.64730	HepG2	SSB
ECI2	ENSG00000198721.8	2027.56160	6509.12490	-1.68270	71.69490	69.86720	HepG2	NELFE
ECI2	ENSG00000198721.8	2430.11750	4276.16660	-0.81530	42.75980	41.00160	HepG2	PUM1
ECI2	ENSG00000198721.8	2720.43210	5848.60170	-1.10430	41.89570	40.29870	HepG2	PTBP1
ECI2	ENSG00000198721.8	2686.82110	5748.02830	-1.09720	40.08320	38.25640	HepG2	PCBP1
ECI2	ENSG00000198721.8	2461.05930	5170.81290	-1.07110	39.38920	37.78150	HepG2	SRSF9
ECI2	ENSG00000198721.8	3146.73550	6062.01560	-0.94590	37.01740	35.25680	HepG2	RECQL
ECI2	ENSG00000198721.8	2987.14080	6089.56530	-1.02760	36.19560	34.50520	HepG2	SF3B4
ECI2	ENSG00000198721.8	1414.81280	2428.90970	-0.77970	31.17700	29.40570	HepG2	SMN1
ECI2	ENSG00000198721.8	3414.67730	6334.67450	-0.89150	29.21240	27.51530	HepG2	QKI
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 147 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ECI2 is not available on ENCORE database.

27 RBPs can affect the splicing of ECI2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	ECI2	ENSG00000198721.8	chr6	-	4119419	4119509	4117541	4117685	4125483	4125604	-0.07700	0.00000	excluded	HepG2	U2AF1
SE	ECI2	ENSG00000198721.8	chr6	-	4119419	4119509	4117541	4117685	4125483	4125604	-0.11000	0.00000	excluded	HepG2	U2AF2
SE	ECI2	ENSG00000198721.8	chr6	-	4119419	4119509	4117541	4117685	4125483	4125604	-0.10000	0.00000	excluded	HepG2	SF3A3
A3SS	ECI2	ENSG00000198721.8	chr6	-	4117541	4119509	4117541	4117685	4125483	4125652	-0.12700	0.00000	shorter	HepG2	SF3A3
A3SS	ECI2	ENSG00000198721.8	chr6	-	4133782	4133945	4133782	4133935	4135744	4135831	-0.29500	0.00000	shorter	K562	U2AF2
A3SS	ECI2	ENSG00000198721.8	chr6	-	4133782	4133945	4133782	4133935	4135744	4135831	-0.29200	0.00000	shorter	K562	FXR1
A3SS	ECI2	ENSG00000198721.8	chr6	-	4133782	4133945	4133782	4133935	4135744	4135831	-0.36200	0.00000	shorter	HepG2	U2AF2
A3SS	ECI2	ENSG00000198721.8	chr6	-	4117541	4119509	4117541	4117685	4125483	4126471	-0.13500	0.00000	shorter	HepG2	U2AF2
A3SS	ECI2	ENSG00000198721.8	chr6	-	4133782	4133945	4133782	4133935	4135744	4135831	0.15900	0.00050	longer	HepG2	TAF15
A3SS	ECI2	ENSG00000198721.8	chr6	-	4133782	4134021	4133782	4133935	4135744	4135825	0.25600	0.00000	longer	K562	AQR

Showing 1 to 10 of 50 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ECI2

General Information

Functions

Localization

Domains (AlphaFold: ECI2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ECI2 is not avaliable on ENCORE database.

20 proteins are bound to ECI2 RNA:

eCLIP assay for ECI2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ECI2 is not available on ENCORE database.

128 RBPs can affect the gene expression of ECI2 :

The Knockdown/knockout RNA-Seq assay for ECI2 is not available on ENCORE database.

27 RBPs can affect the splicing of ECI2 :

The Knockdown/knockout RNA-Seq assay for ECI2 is not avaliable on ENCORE database.