DGCR2

General Information

Gene Name : DGCR2
Gene ID : ENSG00000070413.19
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: DGCR2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	DGCR2	ENSG00000070413.19	7.56	9.85	8.71	ENCSR000AEF
HepG2	DGCR2	ENSG00000070413.19	32.37	20.60	26.48	ENCSR985KAT
K562	DGCR2	ENSG00000070413.19	40.98	40.15	40.56	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for DGCR2 is not avaliable on ENCORE database.

Proteins bound to RNA

DGCR2 RNA is bound by 46 proteins.

CanvasJS.com

eCLIP assay for DGCR2 is not avaliable on ENCORE database.

46 proteins are bound to DGCR2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr22	19025053	19025144	-	3'-UTR,intron-Distal	4.39890	76.99435	K562	UPF1
chr22	19024237	19024368	-	3'-UTR,intron-Distal	6.57520	54.46842	HepG2	UPF1
chr22	19023845	19023885	-	3'-UTR,intron-Distal	5.66389	46.91333	K562	UPF1
chr22	19035970	19036046	-	3'-UTR,CDS,intron-Distal	6.47016	45.94787	HepG2	LIN28B
chr22	19024230	19024342	-	3'-UTR,intron-Distal	5.16037	40.92154	K562	UPF1
chr22	19023885	19023905	-	3'-UTR,intron-Distal	6.40358	40.84282	K562	UPF1
chr22	19025507	19025643	-	3'-UTR,intron-Distal	7.11760	37.21385	HepG2	UPF1
chr22	19023853	19023991	-	3'-UTR,intron-Distal	3.80403	35.71422	K562	PUM2
chr22	19035995	19036045	-	3'-UTR,CDS,intron-Distal	5.30292	35.63210	K562	LIN28B
chr22	19104283	19104472	-	intron-Distal	4.54513	34.27250	K562	RBFOX2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 255 entries

eCLIP assay for DGCR2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for DGCR2 is not available on ENCORE database.
110 RBPs can affect the levels of DGCR2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for DGCR2 is not available on ENCORE database.

110 RBPs can affect the gene expression of DGCR2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
DGCR2	ENSG00000070413.14	970.49500	2485.66360	-1.35680	33.38290	31.47380	K562	PUS1
DGCR2	ENSG00000070413.14	3889.15550	1545.27490	1.33150	25.43160	23.53900	HepG2	EIF4A3
DGCR2	ENSG00000070413.14	1983.67850	1211.17930	0.71170	23.61460	22.22740	HepG2	PUM1
DGCR2	ENSG00000070413.14	2128.08870	1281.17040	0.73200	22.35230	20.85710	HepG2	SUCLG1
DGCR2	ENSG00000070413.14	2184.27110	1141.01340	0.93670	21.46270	19.05550	K562	TIA1
DGCR2	ENSG00000070413.14	3727.06530	1584.42240	1.23400	19.78170	17.53770	HepG2	LARP4
DGCR2	ENSG00000070413.14	1398.07180	2421.64500	-0.79250	18.38190	16.82080	K562	RBM15
DGCR2	ENSG00000070413.14	1749.33980	1126.53410	0.63480	14.23170	12.96720	HepG2	SRSF5
DGCR2	ENSG00000070413.14	917.69820	1527.29010	-0.73490	14.05370	12.93420	HepG2	TAF15
DGCR2	ENSG00000070413.14	1991.34660	1344.57060	0.56650	13.66210	12.52760	HepG2	ACO1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 129 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for DGCR2 is not available on ENCORE database.

7 RBPs can affect the splicing of DGCR2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	DGCR2	ENSG00000070413.14	chr22	-	19039993	19040118			19035952	19036156	19044498	19044675	0.53500	0.00000	0.00000	included	K562	HNRNPC
A3SS	DGCR2	ENSG00000070413.14	chr22	-	19029319	19029561			19029319	19029472	19035952	19036156	0.07300	0.00000	0.00000	longer	K562	AQR
MXE	DGCR2	ENSG00000070413.14	chr22	-	19035952	19036156	19039993	19040118	19029319	19029472	19044498	19044675	0.18800	0.00000	0.00000	1included	K562	HNRNPC
MXE	DGCR2	ENSG00000070413.14	chr22	-	19028570	19029472	19035952	19036156	19025349	19026634	19044498	19044566	-0.42400	0.00000	0.00000	2included	K562	HNRNPC
MXE	DGCR2	ENSG00000070413.14	chr22	-	19039993	19040118	19044498	19044675	19035952	19036156	19050714	19050791	-0.12000	0.00000	0.00001	2included	K562	HNRNPC
MXE	DGCR2	ENSG00000070413.14	chr22	-	19039993	19040118	19044498	19044699	19035952	19036156	19050714	19050791	-0.55900	0.00000	0.00000	2included	K562	HNRNPC
SE	DGCR2	ENSG00000070413.14	chr22	-	19039993	19040118			19035952	19036156	19044498	19044675	-0.09100	0.00001	0.00054	excluded	K562	SRSF1
RI	DGCR2	ENSG00000070413.14	chr22	-	19028570	19029472			19028570	19028807	19029319	19029472	-0.10500	0.00030	0.07082	excluded	HepG2	XRCC6
MXE	DGCR2	ENSG00000070413.14	chr22	-	19044498	19044675	19050714	19050791	19035952	19036156	19052360	19052580	-0.12100	0.00030	0.03320	2included	K562	PUM1
SE	DGCR2	ENSG00000070413.14	chr22	-	19039993	19040118			19035952	19036156	19044498	19044675	0.11500	0.00075	0.03063	included	HepG2	HNRNPC

Showing 1 to 10 of 13 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

DGCR2

General Information

Functions

Localization

Domains (AlphaFold: DGCR2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for DGCR2 is not avaliable on ENCORE database.

46 proteins are bound to DGCR2 RNA:

eCLIP assay for DGCR2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for DGCR2 is not available on ENCORE database.

110 RBPs can affect the gene expression of DGCR2 :

The Knockdown/knockout RNA-Seq assay for DGCR2 is not available on ENCORE database.

7 RBPs can affect the splicing of DGCR2 :

The Knockdown/knockout RNA-Seq assay for DGCR2 is not avaliable on ENCORE database.