CNOT1

General Information

Gene Name       : CNOT1
Gene ID             : ENSG00000125107.17
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: CNOT1)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CNOT1ENSG00000125107.17140.75149.32145.03ENCSR000AEF
HepG2CNOT1ENSG00000125107.17343.78244.03293.90ENCSR985KAT
K562CNOT1ENSG00000125107.17194.31168.64181.47ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CNOT1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • CNOT1 RNA is bound by 61 proteins.  







eCLIP assay for CNOT1 is not avaliable on ENCORE database.





61 proteins are bound to CNOT1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr165855915358559186-3'-UTR,CDS,intron-Distal3.165109.06050HepG2IGF2BP1
chr165855489058554942-3'-UTR,CDS,intron-Distal,intron-Proximal4.9662412.81487HepG2DDX55
chr165861032658610391-3'-UTR,CDS,intron-Distal,intron-Proximal4.3133118.19115HepG2PRPF8
chr165855736758557406-3'-UTR,CDS,intron-Distal3.104055.33443K562IGF2BP2
chr165855924058559318-3'-UTR,CDS,intron-Distal,intron-Proximal3.927897.79506K562AQR
chr165857617658576242-3'-UTR,CDS,intron-Distal,intron-Proximal3.484229.02130K562EFTUD2
chr165857634158576386-3'-UTR,CDS,intron-Distal3.4803311.85307HepG2BCLAF1
chr165855488758554938-3'-UTR,CDS,intron-Distal,intron-Proximal3.229343.77473HepG2PABPN1
chr165863336558633414-3'-UTR,5'-UTR,intron-Distal4.2230424.23570HepG2BCLAF1
chr165860895258609016-3'-UTR,CDS,intron-Distal,intron-Proximal5.126759.21403K562FXR1
chr165855520458555222-3'-UTR,CDS,intron-Distal,intron-Proximal4.822069.25286K562PUM2
chr165855455658554609-3'-UTR,intron-Distal,intron-Proximal,polyA_site4.080055.53799K562FAM120A
chr165855989958559932-3'-UTR,CDS,intron-Distal3.644003.42386K562FXR1
chr165860902058609031-3'-UTR,CDS,intron-Distal,intron-Proximal3.6165110.10467HepG2BCLAF1
chr165860901658609032-3'-UTR,CDS,intron-Distal,intron-Proximal3.922313.92527K562FXR1
chr165855731658557386-3'-UTR,CDS,intron-Distal3.923198.33492HepG2IGF2BP1
chr165857619258576226-3'-UTR,CDS,intron-Distal3.297815.62825HepG2FXR2
chr165855470958554770-3'-UTR,intron-Distal3.202233.53786HepG2SUB1
chr165861036958610388-3'-UTR,CDS,intron-Distal4.1368413.42460HepG2BCLAF1
chr165855492058554939-3'-UTR,CDS,intron-Distal3.118104.06225HepG2FXR2
chr165863331658633418-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.735268.95010HepG2TRA2A
chr165855403258554082-3'-UTR,intron-Distal3.9385710.38424K562FAM120A
chr165855913558559264-3'-UTR,CDS,intron-Distal,intron-Proximal3.205784.02618HepG2IGF2BP3
chr165855489658554920-3'-UTR,CDS,intron-Distal,intron-Proximal3.396996.00923HepG2FXR2
chr165855515258555204-3'-UTR,CDS,intron-Distal6.1223653.51007K562PUM2
chr165855388458553943-3'-UTR,intron-Distal4.178488.93225K562FAM120A
chr165863329158633344-3'-UTR,5'-UTR,intron-Distal3.394138.45427K562UCHL5
chr165855728958557316-3'-UTR,CDS,intron-Distal3.365485.84875HepG2FXR2
chr165856001158560055-3'-UTR,CDS,intron-Distal,intron-Proximal4.878236.59451HepG2PRPF8
chr165857613858576163-3'-UTR,CDS,intron-Distal3.5175710.50604HepG2BCLAF1
chr165863323658633285-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.213389.42763K562FMR1
chr165857609258576152-3'-UTR,CDS,intron-Distal,intron-Proximal4.3098411.87912HepG2PRPF8
chr165863323658633290-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.1068611.96908K562FXR2
chr165863335458633415-3'-UTR,5'-UTR,intron-Distal3.001674.57125HepG2UCHL5
chr165857617958576234-3'-UTR,CDS,intron-Distal,intron-Proximal3.258284.82595K562FXR1
chr165855989158559946-3'-UTR,CDS,intron-Distal,intron-Proximal3.262247.49421K562IGF2BP1
chr165863333958633416-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.6000713.46529HepG2GRWD1
chr165863338158633416-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.169287.23254K562DDX3X
chr165857635458576413-3'-UTR,CDS,intron-Distal5.4801610.78702K562LIN28B
chr165855519358555221-3'-UTR,CDS,intron-Distal3.931654.53300K562LIN28B
chr165855490558554927-3'-UTR,CDS,intron-Distal,intron-Proximal3.1446413.95273K562YBX3
chr165855508558555194-3'-UTR,CDS,intron-Distal,intron-Proximal3.6227111.17747HepG2DDX55
chr165857620658576296-3'-UTR,CDS,intron-Distal,intron-Proximal3.6766810.54702HepG2EFTUD2
chr165855727358557314-3'-UTR,CDS,intron-Distal,intron-Proximal3.435283.91115K562LIN28B
chr165855492758554939-3'-UTR,CDS,intron-Distal3.0091311.87215K562YBX3
chr165856003458560099-3'-UTR,CDS,intron-Distal,intron-Proximal4.782514.97857HepG2AQR
chr165855728758557357-3'-UTR,CDS,intron-Distal4.311595.78644K562FXR1
chr165860901558609030-3'-UTR,CDS,intron-Distal,intron-Proximal4.272434.39669K562BUD13
chr165863320858633278-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.3937113.86851HepG2FXR2
chr165855457358554600-3'-UTR,intron-Distal,intron-Proximal,polyA_site5.3671423.47213K562PUM2
chr165855460058554672-3'-UTR,intron-Distal,intron-Proximal5.05006400.00000K562PUM2
chr165857642958576469-3'-UTR,CDS,intron-Distal4.9550810.13648HepG2FXR2
chr165855989858559939-3'-UTR,CDS,intron-Distal3.596266.39233HepG2FXR2
chr165860894858608991-3'-UTR,CDS,intron-Distal,intron-Proximal3.257866.82055K562YBX3
chr165863330958633418-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.257934.17566K562SRSF7
chr165855516658555222-3'-UTR,CDS,intron-Distal,intron-Proximal5.154887.56505HepG2LIN28B
chr165857613558576177-3'-UTR,CDS,intron-Distal3.020694.43975HepG2G3BP1
chr165855509758555103-3'-UTR,CDS,intron-Distal3.147928.02162HepG2BCLAF1
chr165863333958633365-3'-UTR,5'-UTR,intron-Distal5.3066833.03786HepG2BCLAF1
chr165863329058633339-3'-UTR,5'-UTR,intron-Distal3.9341630.62220HepG2BCLAF1
chr165858550558585538-5'-UTR,CDS,intron-Distal,intron-Proximal4.5124118.05478K562YBX3
chr165866363158663634-5'-UTR,intron-Distal3.190596.81934HepG2GRWD1
chr165866363058663717-5'-UTR,intron-Distal3.5372817.49632K562DDX3X
chr165866363058663716-5'-UTR,intron-Distal3.1724732.30736HepG2DDX3X
chr165866363058663667-5'-UTR,intron-Distal3.3557013.30568HepG2NCBP2
chr165866363158663672-5'-UTR,intron-Distal3.2959910.69984K562UCHL5
chr165866363458663667-5'-UTR,intron-Distal3.324317.38941HepG2GRWD1
chr165866363158663640-5'-UTR,intron-Distal3.070346.52802K562ZNF622
chr165858504958585066-5'-UTR,CDS,intron-Distal4.2090313.42460HepG2BCLAF1
chr165865729458657333-5'-UTR,intron-Distal,intron-Proximal4.699634.65563K562AQR
chr165858549458585505-5'-UTR,CDS,intron-Distal,intron-Proximal4.933248.97367K562YBX3
chr165858503558585049-5'-UTR,CDS,intron-Distal,intron-Proximal5.2613114.84999HepG2BCLAF1
chr165865729258657341-5'-UTR,intron-Distal,intron-Proximal4.124753.59236HepG2AQR
chr165858503658585068-5'-UTR,CDS,intron-Distal4.531097.16354HepG2FXR2
chr165858511458585149-5'-UTR,CDS,intron-Distal5.5930810.23443HepG2FXR2
chr165866363158663670-5'-UTR,intron-Distal3.285806.40565K562DDX24
chr165859083158590897-CDS,intron-Distal,intron-Proximal3.638484.78882K562IGF2BP2
chr165857771558577830-CDS,intron-Distal,intron-Proximal3.696669.15722K562U2AF2
chr165861464758614663-CDS,intron-Distal3.0596910.90260HepG2BCLAF1
chr165858052758580608-CDS,intron-Distal,intron-Proximal4.9343515.84669HepG2PRPF8
chr165859417758594194-CDS,intron-Distal3.1350611.16611K562YBX3
chr165859076958590842-CDS,intron-Distal3.036998.08354K562FXR2
chr165858911058589162-CDS,intron-Distal,intron-Proximal3.080484.29223HepG2PRPF8
chr165857268858572728-CDS,intron-Distal3.814386.55815K562FMR1
chr165858976558589824-CDS,intron-Distal,intron-Proximal3.1059917.41799HepG2U2AF2
chr165861455558614644-CDS,intron-Distal3.055973.90285K562IGF2BP1
chr165859242858592492-CDS,intron-Distal,intron-Proximal3.307224.19285K562IGF2BP1
chr165856592658565977-CDS,intron-Distal4.595736.75859K562FXR1
chr165857195458571963-CDS,intron-Distal,intron-Proximal3.8759012.80995HepG2BCLAF1
chr165861274958612809-CDS,intron-Distal3.910429.04968HepG2G3BP1
chr165858057958580618-CDS,intron-Distal,intron-Proximal3.962934.11409K562FXR1
chr165861045558610500-CDS,intron-Distal,intron-Proximal3.659954.90219HepG2AQR
chr165859424258594259-CDS,intron-Distal3.3707111.20660HepG2BCLAF1
chr165861042058610455-CDS,intron-Distal,intron-Proximal3.050596.79959HepG2BUD13
chr165859407858594166-CDS,intron-Distal,intron-Proximal4.3782310.59445HepG2PRPF8
chr165857181658571889-CDS,intron-Distal3.7296415.42293HepG2FXR2
chr165862063358620652-CDS,intron-Distal3.7089521.19068HepG2BCLAF1
chr165862060658620633-CDS,intron-Distal3.223279.69611HepG2BCLAF1
chr165858362058583687-CDS,intron-Distal,intron-Proximal3.101235.94696HepG2ZNF800
chr165858022358580266-CDS,intron-Distal,intron-Proximal3.354318.50380HepG2GRWD1
chr165857206258572084-CDS,intron-Distal,intron-Proximal3.705813.72388HepG2FXR2
chr165856234458562396-CDS,intron-Distal,intron-Proximal3.963095.73990HepG2PRPF8
chr165857930858579392-CDS,intron-Distal4.017978.55200HepG2IGF2BP3
chr165861454958614610-CDS,intron-Distal3.045245.09999HepG2ZNF800
chr165861260158612634-CDS,intron-Distal,intron-Proximal4.2147915.01351K562DDX24
chr165857778758577846-CDS,intron-Distal,intron-Proximal3.914789.48554K562SF3B4
chr165856817058568243-CDS,intron-Distal3.512449.66746HepG2FXR2
chr165861674858616805-CDS,intron-Distal3.241834.64720K562U2AF2
chr165856828458568292-CDS,intron-Distal3.007523.17744HepG2GRWD1
chr165857208558572139-CDS,intron-Distal3.178926.39334K562FXR1
chr165857209558572138-CDS,intron-Distal4.190689.58229K562FXR2
chr165861040758610434-CDS,intron-Distal,intron-Proximal3.9628013.66456HepG2BCLAF1
chr165861924258619284-CDS,intron-Distal4.2452310.09214K562DDX24
chr165857747358577531-CDS,intron-Distal,intron-Proximal5.4369210.76264HepG2PRPF8
chr165858363458583679-CDS,intron-Distal4.122373.65778K562GRWD1
chr165856617058566198-CDS,intron-Distal3.4778610.50604HepG2BCLAF1
chr165858372158583771-CDS,intron-Distal4.078344.88762K562FXR1
chr165861936058619423-CDS,intron-Distal,intron-Proximal3.6050115.41421HepG2U2AF2
chr165861454058614622-CDS,intron-Distal3.6646334.82766HepG2BCLAF1
chr165856808958568124-CDS,intron-Distal4.884187.38783HepG2G3BP1
chr165861524858615343-CDS,intron-Distal,intron-Proximal4.4919510.57610HepG2EIF3H
chr165856819058568225-CDS,intron-Distal3.365925.49938HepG2G3BP1
chr165861453658614609-CDS,intron-Distal,intron-Proximal3.090507.73471HepG2PPIG
chr165857279258572827-CDS,intron-Distal,intron-Proximal3.701344.50744HepG2U2AF2
chr165858377558583802-CDS,intron-Distal3.007527.44115K562ZNF622
chr165858370958583773-CDS,intron-Distal3.8599027.22884HepG2BCLAF1
chr165857090158570950-CDS,intron-Distal3.580636.67863K562FXR2
chr165858940658589454-CDS,intron-Distal,intron-Proximal4.225855.47725K562U2AF2
chr165857206458572086-CDS,intron-Distal3.106213.80065HepG2PPIG
chr165857550858575519-CDS,intron-Distal3.766426.05315HepG2FXR2
chr165859233558592412-CDS,intron-Distal,intron-Proximal4.2383623.60801HepG2PRPF8
chr165861533558615366-CDS,intron-Distal3.780455.97027HepG2GRWD1
chr165862056958620635-CDS,intron-Distal3.041737.78685HepG2GRWD1
chr165858923258589288-CDS,intron-Distal4.422316.56854K562FXR1
chr165858922558589269-CDS,intron-Distal3.186035.85254K562FXR2
chr165862061058620643-CDS,intron-Distal3.197748.52352K562YBX3
chr165858019458580319-CDS,intron-Distal,intron-Proximal3.491555.62401HepG2TRA2A
chr165861676158616803-CDS,intron-Distal4.481968.51520K562DDX24
chr165857548858575550-CDS,intron-Distal,intron-Proximal3.052955.69184K562AQR
chr165856627358566297-CDS,intron-Distal3.214316.35478K562YBX3
chr165858968758589739-CDS,intron-Distal,intron-Proximal3.227699.38233K562ZNF622
chr165862276258622807-CDS,intron-Distal3.127185.59535K562FXR2
chr165862064058620652-CDS,intron-Distal4.981966.93329K562DDX24
chr165861260258612636-CDS,intron-Distal,intron-Proximal3.296283.50849HepG2PPIG
chr165857762858577651-CDS,intron-Distal3.837635.69815HepG2G3BP1
chr165861696358617025-CDS,intron-Distal4.0168517.21811K562DDX24
chr165857089858570959-CDS,intron-Distal3.348836.77101K562FMR1
chr165858022558580293-CDS,intron-Distal,intron-Proximal3.1119411.81003HepG2FXR2
chr165858566758585725-CDS,intron-Distal,intron-Proximal3.2642110.70187K562SF3B4
chr165857537458575423-CDS,intron-Distal,intron-Proximal3.100804.71929HepG2PRPF8
chr165860858258608616-CDS,intron-Distal,intron-Proximal4.030866.19451K562FXR2
chr165862039358620451-CDS,intron-Distal,intron-Proximal4.8856010.46790HepG2PCBP2
chr165861936258619411-CDS,intron-Distal,intron-Proximal4.182964.13361HepG2U2AF1
chr165862057958620624-CDS,intron-Distal3.738963.73303HepG2UCHL5
chr165861046758610486-CDS,intron-Distal,intron-Proximal3.0342810.46509K562YBX3
chr165861708158617087-CDS,intron-Distal,intron-Proximal4.350444.67299K562DDX24
chr165862169858621721-CDS,intron-Distal,intron-Proximal4.7571145.15934K562YBX3
chr165861260858612631-CDS,intron-Distal3.3928312.75252K562YBX3
chr165861525658615278-CDS,intron-Distal4.397356.32827HepG2FXR2
chr165861675958616797-CDS,intron-Distal3.2346813.41553HepG2BCLAF1
chr165861936958619437-CDS,intron-Distal,intron-Proximal3.433796.60787K562ILF3
chr165857547358575550-CDS,intron-Distal,intron-Proximal3.145696.26762K562U2AF2
chr165862270258622709-CDS,intron-Distal,intron-Proximal3.3918912.26549HepG2BCLAF1
chr165862172758621733-CDS,intron-Distal,intron-Proximal5.0744937.25277K562YBX3
chr165856818058568234-CDS,intron-Distal4.443474.28193HepG2AQR
chr165861527658615342-CDS,intron-Distal4.7559028.06240HepG2BCLAF1
chr165862277058622812-CDS,intron-Distal,intron-Proximal3.391188.69261K562BUD13
chr165862277658622798-CDS,intron-Distal3.4429111.20660HepG2BCLAF1
chr165860851758608542-CDS,intron-Distal,intron-Proximal3.041933.84967HepG2G3BP1
chr165857179458571816-CDS,intron-Distal,intron-Proximal3.474636.39233HepG2FXR2
chr165858561958585645-CDS,intron-Distal,intron-Proximal3.651426.77731HepG2FXR2
chr165861280958612833-CDS,intron-Distal3.7720620.45628HepG2BCLAF1
chr165861535058615387-CDS,intron-Distal4.4886319.07763K562YBX3
chr165861260158612641-CDS,intron-Distal,intron-Proximal3.172084.50889HepG2EIF3H
chr165857931658579390-CDS,intron-Distal4.212979.16506K562IGF2BP1
chr165861525058615277-CDS,intron-Distal4.735786.01390HepG2GRWD1
chr165857273958572809-CDS,intron-Distal3.143285.39677K562FXR2
chr165861699658617069-CDS,intron-Distal3.491255.22339HepG2ZNF800
chr165856416258564200-CDS,intron-Distal3.803164.97737HepG2G3BP1
chr165857780158577849-CDS,intron-Distal,intron-Proximal3.581398.35379HepG2SF3A3
chr165862040658620459-CDS,intron-Distal,intron-Proximal3.496518.39123HepG2PRPF8
chr165859418858594210-CDS,intron-Distal3.370425.05864HepG2YBX3
chr165861266358612731-CDS,intron-Distal3.6107313.07932K562YBX3
chr165859077258590827-CDS,intron-Distal4.829297.69676K562FXR1
chr165861263158612663-CDS,intron-Distal3.2845210.68687K562YBX3
chr165857540258575442-CDS,intron-Distal,intron-Proximal5.9843114.30518K562FXR2
chr165859078058590818-CDS,intron-Distal4.073446.49445HepG2G3BP1
chr165861465558614659-CDS,intron-Distal4.082724.21087HepG2GRWD1
chr165858379358583802-CDS,intron-Distal3.543573.26047K562FXR1
chr165858362158583692-CDS,intron-Distal,intron-Proximal4.1110734.65031HepG2BCLAF1
chr165858372158583768-CDS,intron-Distal4.215047.94477HepG2GRWD1
chr165862107058621138-CDS,intron-Distal,intron-Proximal5.048068.11807HepG2PRPF8
chr165862172158621727-CDS,intron-Distal,intron-Proximal5.1385239.55889K562YBX3
chr165861278258612820-CDS,intron-Distal3.925317.06029HepG2GRWD1
chr165856588058565909-CDS,intron-Distal3.483737.99373K562YBX3
chr165861042958610487-CDS,intron-Distal,intron-Proximal4.741998.01466HepG2EIF3H
chr165861278358612809-CDS,intron-Distal3.3185916.91614HepG2BCLAF1
chr165862175358621772-CDS,intron-Distal3.3420310.35084HepG2BCLAF1
chr165858061358580659-CDS,intron-Distal,intron-Proximal3.129616.83989HepG2U2AF2
chr165861524658615257-CDS,intron-Distal,intron-Proximal3.476063.95937K562UCHL5
chr165859422358594322-CDS,intron-Distal,intron-Proximal4.4466411.85638K562SF3B4
chr165861043358610467-CDS,intron-Distal,intron-Proximal3.6571619.44309K562YBX3
chr165857276158572801-CDS,intron-Distal4.022894.83756K562FMR1
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chr165858572558585751-intron-Distal,intron-Proximal5.2426814.90111K562SF3B4
chr165858243758582443-intron-Distal4.24437400.00000HepG2DKC1
chr165862007858620126-intron-Distal4.3262110.04245K562CSTF2T
chr165866356158663631-intron-Distal3.237576.13643K562AQR
chr165858160258581690-intron-Distal,intron-Proximal4.7899310.59756HepG2SF3A3
chr165858016958580222-intron-Distal,intron-Proximal3.529186.00776K562PRPF8
chr165862039458620436-intron-Distal,intron-Proximal3.355113.85034K562ILF3
chr165863351658633605-intron-Distal4.076405.50753K562QKI
chr165861473858614880-intron-Distal,intron-Proximal5.055509.39339K562KHSRP
chr165862005158620162-intron-Distal6.0825618.60256K562ILF3
chr165865287258652934-intron-Distal3.805693.24590HepG2ILF3
chr165863769158637751-intron-Distal3.416466.13210HepG2RBFOX2
chr165857163358571765-intron-Distal,intron-Proximal5.627358.73280K562QKI
chr165859065558590734-intron-Distal,intron-Proximal4.228644.39969K562TARDBP
chr165862039158620447-intron-Distal,intron-Proximal3.715025.29044K562CSTF2T
chr165861964858619697-intron-Distal4.623416.51015K562CSTF2T
chr165866341958663464-intron-Distal5.2478410.08328HepG2PRPF4
chr165857169758571751-intron-Distal,intron-Proximal5.480588.68064HepG2QKI
chr165862012658620156-intron-Distal4.896426.36475K562CSTF2T
chr165861878258618850-intron-Distal4.103283.48768HepG2KHSRP
chr165858051058580569-intron-Distal,intron-Proximal5.382178.78545K562PRPF8
chr165858242258582429-intron-Distal4.19733400.00000HepG2DKC1
chr165855903658559080-intron-Distal,intron-Proximal4.300454.89208K562AQR
chr165857332558573414-intron-Distal4.183444.44706K562EIF4G2
chr165858993758590135-intron-Distal3.7850320.62333K562KHSRP
chr165858982558589873-intron-Distal,intron-Proximal3.908235.04653K562SF3B4
chr165859401758594046-intron-Distal,intron-Proximal3.326325.74374K562KHSRP
chr165858098858581039-intron-Distal,intron-Proximal3.824934.93376K562PRPF8
chr165856608358566134-intron-Distal,intron-Proximal3.077074.20978K562AQR
chr165856533058565417-intron-Distal4.322235.25174K562KHSRP
chr165859397858594017-intron-Distal,intron-Proximal4.521324.10688K562KHSRP
chr165857920158579249-intron-Distal,intron-Proximal3.676914.23459K562PRPF8
chr165858249858582508-intron-Distal5.14958400.00000HepG2DKC1
chr165856520558565225-intron-Distal3.517475.94782HepG2U2AF2
chr165860842558608461-intron-Distal,intron-Proximal3.614144.23459K562PRPF8
chr165859378758593825-intron-Distal4.42400400.00000HepG2DKC1
chr165857599258576018-intron-Distal3.950013.92684K562KHSRP
chr165861976458619796-intron-Distal3.865873.43867K562CSTF2T
chr165858950658589570-intron-Distal,intron-Proximal4.6362912.47010K562KHSRP
chr165858241758582421-intron-Distal3.170625.77934K562ZC3H8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CNOT1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CNOT1 is not available on ENCORE database.

  • 99 RBPs can affect the levels of CNOT1.  








The Knockdown/knockout RNA-Seq assay for CNOT1 is not available on ENCORE database.





99 RBPs can affect the gene expression of CNOT1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CNOT1ENSG00000125107.127213.158309084.20090-0.332708.699807.74550HepG2ACO1
CNOT1ENSG00000125107.127564.7358010639.10860-0.492004.543603.88430HepG2AKAP1
CNOT1ENSG00000125107.126222.350509319.08690-0.582706.575105.01390HepG2AKAP8
CNOT1ENSG00000125107.129796.0092013328.23830-0.4442012.8801011.59320HepG2AUH
CNOT1ENSG00000125107.125525.837708138.77890-0.558605.790004.41150HepG2BCCIP
CNOT1ENSG00000125107.125391.951707071.87350-0.391303.270002.29370HepG2BCLAF1
CNOT1ENSG00000125107.128817.1625010655.17790-0.273202.524801.94980HepG2BOP1
CNOT1ENSG00000125107.128287.2966011377.19630-0.457208.787307.52360HepG2CALR
CNOT1ENSG00000125107.1210124.596208363.505200.275602.176401.48570HepG2CIRBP
CNOT1ENSG00000125107.127705.680909782.06020-0.344203.338502.59120HepG2CPSF6
CNOT1ENSG00000125107.128152.7132010570.69070-0.374704.787603.35880HepG2CPSF7
CNOT1ENSG00000125107.126089.972308750.73520-0.5230011.680509.67520HepG2YBX3
CNOT1ENSG00000125107.127066.4305010629.10880-0.5890018.4624017.10210HepG2CELF1
CNOT1ENSG00000125107.129408.2988011428.50160-0.280607.736706.58700HepG2DAZAP1
CNOT1ENSG00000125107.124567.935308002.15640-0.8088011.5361010.08760HepG2DDX55
CNOT1ENSG00000125107.129156.1326011459.20090-0.323702.783401.76900HepG2DDX5
CNOT1ENSG00000125107.126990.797608592.44780-0.297604.840403.93280HepG2DNAJC21
CNOT1ENSG00000125107.127122.001008516.74600-0.258006.341905.41330HepG2DNAJC2
CNOT1ENSG00000125107.125457.064006733.37230-0.303202.514001.45590HepG2EFTUD2
CNOT1ENSG00000125107.126097.432208019.56550-0.395302.785001.67540HepG2AGO1
CNOT1ENSG00000125107.125290.940608416.32420-0.669709.358908.30720HepG2EIF2S1
CNOT1ENSG00000125107.129003.3914010800.91850-0.262602.172501.44410HepG2EIF4G2
CNOT1ENSG00000125107.1212219.7764015302.43840-0.324507.326906.42770HepG2ETF1
CNOT1ENSG00000125107.124537.862405860.16150-0.368905.303903.65510HepG2FAM120A
CNOT1ENSG00000125107.126881.893408300.28490-0.270402.791401.64320HepG2FASTKD2
CNOT1ENSG00000125107.126405.634608705.27300-0.442504.034203.23950HepG2G3BP1
CNOT1ENSG00000125107.125481.0495011088.79960-1.0166019.0511017.52600HepG2GPKOW
CNOT1ENSG00000125107.127635.909708672.48220-0.183602.529601.59180HepG2HDGF
CNOT1ENSG00000125107.128416.7919010503.31330-0.319506.482905.15350HepG2HNRNPA2B1
CNOT1ENSG00000125107.126341.326809649.13250-0.6056010.822509.52970HepG2HNRNPC
CNOT1ENSG00000125107.128813.4609010608.87840-0.267505.408804.44620HepG2HNRNPF
CNOT1ENSG00000125107.127975.8453010410.36890-0.3843014.1859012.77150HepG2HNRNPL
CNOT1ENSG00000125107.126963.207108942.51030-0.360904.598903.40450HepG2HNRNPM
CNOT1ENSG00000125107.126615.042509585.33400-0.5351018.8069017.33500HepG2HNRNPU
CNOT1ENSG00000125107.127130.258909791.09160-0.4575019.8532018.09860HepG2ILF2
CNOT1ENSG00000125107.126110.203608045.56290-0.397004.752603.26640HepG2LARP7
CNOT1ENSG00000125107.128659.5505010490.05590-0.276702.864302.04180HepG2MSI2
CNOT1ENSG00000125107.125397.664907274.86450-0.430605.041903.11700HepG2NIP7
CNOT1ENSG00000125107.127720.6062011332.50010-0.5537013.0545011.45450HepG2NOL12
CNOT1ENSG00000125107.125849.436308605.35360-0.556906.426705.33830HepG2PABPC4
CNOT1ENSG00000125107.127915.606009487.76790-0.261404.689903.62130HepG2PARN
CNOT1ENSG00000125107.1210024.700809006.012000.154501.928901.40720HepG2PCBP1
CNOT1ENSG00000125107.126734.443908549.34200-0.344306.049704.99290HepG2PPIL4
CNOT1ENSG00000125107.124684.625706172.78200-0.398003.729002.80820HepG2PRPF8
CNOT1ENSG00000125107.1210157.9271011483.88600-0.177003.507402.85540HepG2PUM1
CNOT1ENSG00000125107.128849.1504013231.17840-0.5803013.2223011.55830HepG2RBM15
CNOT1ENSG00000125107.129003.1051012790.04080-0.5065013.6115012.63690HepG2RBM22
CNOT1ENSG00000125107.127746.485409701.60110-0.324702.845701.84080HepG2RBM27
CNOT1ENSG00000125107.128256.3479011429.44740-0.469207.077206.05990HepG2RPLP0
CNOT1ENSG00000125107.127026.517109374.08300-0.415902.392501.51290HepG2RPS10
CNOT1ENSG00000125107.125227.407506380.04940-0.287503.080702.43690HepG2RPS19
CNOT1ENSG00000125107.127248.677808947.52200-0.303802.655201.86990HepG2RPS2
CNOT1ENSG00000125107.127011.779309133.39760-0.381403.857402.57180HepG2RPS5
CNOT1ENSG00000125107.126317.471308536.13000-0.4342014.9086013.59460HepG2SAFB2
CNOT1ENSG00000125107.129178.8082010373.01570-0.176503.261702.51030HepG2SLBP
CNOT1ENSG00000125107.128041.287609954.51320-0.3079010.306209.19330HepG2SMN1
CNOT1ENSG00000125107.127463.239109729.28410-0.382502.389101.50450HepG2SMNDC1
CNOT1ENSG00000125107.127062.2251011654.55610-0.722706.216405.03800HepG2SNRNP70
CNOT1ENSG00000125107.1210619.1195014445.94040-0.4440016.1243015.17730HepG2SRFBP1
CNOT1ENSG00000125107.1217013.445409958.600700.7726045.8812044.46540HepG2SRSF1
CNOT1ENSG00000125107.128049.3546010423.12330-0.372809.119207.98370HepG2SRSF7
CNOT1ENSG00000125107.123519.325005838.65710-0.730307.612205.71800HepG2STIP1
CNOT1ENSG00000125107.124547.516407965.95520-0.8088012.2722011.01690HepG2SUPV3L1
CNOT1ENSG00000125107.1210398.149108950.812600.216102.682902.13040HepG2TAF15
CNOT1ENSG00000125107.128044.5809010314.21540-0.358503.860503.01970HepG2TARDBP
CNOT1ENSG00000125107.123539.223805339.25900-0.593206.979105.51760HepG2TFIP11
CNOT1ENSG00000125107.125479.365509313.72820-0.7653021.9670020.80870HepG2TIAL1
CNOT1ENSG00000125107.126554.044909397.21680-0.5198017.4445016.18850HepG2TRIM56
CNOT1ENSG00000125107.128681.4575011087.02400-0.352903.457102.75980HepG2U2AF1
CNOT1ENSG00000125107.128865.7759011187.16700-0.335502.706401.87830HepG2UBE2L3
CNOT1ENSG00000125107.123059.137004705.68830-0.621307.996806.70880HepG2UCHL5
CNOT1ENSG00000125107.124621.780707294.19610-0.658305.955904.44320HepG2UPF2
CNOT1ENSG00000125107.128882.4098011639.51120-0.3900011.4616010.37490HepG2UTP3
CNOT1ENSG00000125107.126038.180307841.61140-0.377003.590402.77280HepG2XRN2
CNOT1ENSG00000125107.129654.7863013259.20140-0.4577021.6587020.48550HepG2ZNF622
CNOT1ENSG00000125107.1212183.5745016064.85580-0.3990011.7859010.70790K562AGGF1
CNOT1ENSG00000125107.1214680.5374017652.32050-0.266002.540601.60600K562AKAP8
CNOT1ENSG00000125107.1214365.0036016716.08090-0.218701.870901.32920K562AKAP8L
CNOT1ENSG00000125107.129793.2770012813.50570-0.387804.745904.01480K562AQR
CNOT1ENSG00000125107.1214431.1754017538.94750-0.281404.393803.21460K562ATP5C1
CNOT1ENSG00000125107.128487.5071010823.78430-0.350804.929703.88960K562CPSF6
CNOT1ENSG00000125107.127542.617809592.30320-0.346807.394205.37700K562EIF2S1
CNOT1ENSG00000125107.129768.9203010970.69080-0.167401.978201.35200K562EIF2S2
CNOT1ENSG00000125107.1211592.118408596.727100.431203.782702.55760K562EIF3D
CNOT1ENSG00000125107.126788.333409123.87330-0.426605.465704.31520K562EIF4A3
CNOT1ENSG00000125107.129529.7519013460.64350-0.498207.194105.76710K562FIP1L1
CNOT1ENSG00000125107.127331.7322010333.79480-0.495107.637106.31490K562GPKOW
CNOT1ENSG00000125107.128109.6810014619.11540-0.8501023.4967021.20030K562GRSF1
CNOT1ENSG00000125107.125497.292808634.24340-0.6513013.7753012.52720K562HNRNPC
CNOT1ENSG00000125107.127522.1120011071.39170-0.557606.448204.93710K562HNRNPM
CNOT1ENSG00000125107.1212372.1889018250.02680-0.560808.801607.39890K562HSPD1
CNOT1ENSG00000125107.127960.3142011488.58660-0.529308.743507.20470K562MAGOH
CNOT1ENSG00000125107.128242.7746010087.04480-0.291303.120502.18730K562METAP2
CNOT1ENSG00000125107.1210266.9356012203.04410-0.249205.133804.05610K562MTPAP
CNOT1ENSG00000125107.1212189.1414013558.59040-0.153603.808602.94870K562NSUN2
CNOT1ENSG00000125107.129718.9171015280.23370-0.6528010.843908.91170K562PPIG
CNOT1ENSG00000125107.126203.697307741.40710-0.319503.372402.36020K562PSIP1
CNOT1ENSG00000125107.128656.5383011161.99810-0.366705.036204.16330K562PTBP1
CNOT1ENSG00000125107.1216583.6203021417.08170-0.369007.648206.02720K562PUM2
CNOT1ENSG00000125107.1213253.3540016152.67040-0.285404.445803.71270K562RBM15
CNOT1ENSG00000125107.127426.8591010702.17040-0.527107.653906.16720K562RBM22
CNOT1ENSG00000125107.128948.9206011262.52190-0.331703.008901.86460K562NELFE
CNOT1ENSG00000125107.126448.464207958.65960-0.303602.072401.37000K562RPS19
CNOT1ENSG00000125107.1218220.0084010989.574300.729303.409401.99050K562SNRNP200
CNOT1ENSG00000125107.129377.2060010942.65480-0.222702.185001.54820K562SRSF1
CNOT1ENSG00000125107.125330.429307564.89280-0.505105.216003.78280K562SUPV3L1
CNOT1ENSG00000125107.128050.7893011074.30290-0.460005.424904.41760K562TARDBP
CNOT1ENSG00000125107.129197.7782010682.51490-0.215902.148801.43560K562TIA1
CNOT1ENSG00000125107.1211253.599409238.068100.284603.622302.70140K562U2AF2
CNOT1ENSG00000125107.1212150.8428014376.46790-0.242703.431802.63710K562UPF1
CNOT1ENSG00000125107.1210799.0896014549.12080-0.430004.027602.57180K562UTP3
CNOT1ENSG00000125107.1212239.7958014434.03720-0.237902.065001.33100K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CNOT1 is not available on ENCORE database.





30 RBPs can affect the splicing of CNOT1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECNOT1ENSG00000125107.12chr16-5865718558657313586332775863341558663631586637890.069000.001350.09311includedHepG2G3BP1
SECNOT1ENSG00000125107.12chr16-5865718558657313586332775863341558663631586637890.080000.002080.06428includedK562PRPF8
SECNOT1ENSG00000125107.12chr16-5865718558657313586332775863341558663631586637890.101000.000010.00023includedHepG2U2AF1
SECNOT1ENSG00000125107.12chr16-5856182658562009585598925856004258562378585625520.072000.000000.00000includedK562AKAP8L
SECNOT1ENSG00000125107.12chr16-5865857658658698586331395863341558663631586637290.221000.000000.00000includedK562XRCC6
SECNOT1ENSG00000125107.12chr16-5865718558657313586331665863341558663631586637890.058000.000030.00063includedK562AQR
SECNOT1ENSG00000125107.12chr16-585941155859426658590765585908975860851258608664-0.057000.001550.01766excludedK562AQR
SECNOT1ENSG00000125107.12chr16-585658615856597958564149585642515856613558566299-0.126000.000000.00000excludedK562AQR
SECNOT1ENSG00000125107.12chr16-585876855858778158585492585857235858915458589441-0.058000.001240.01465excludedK562AQR
SECNOT1ENSG00000125107.12chr16-586571855865731358633166586334155866363158663789-0.052000.000010.01126excludedK562ABCF1
SECNOT1ENSG00000125107.12chr16-5865857658658698586331395863341558663631586637290.325000.000500.08986includedHepG2UCHL5
SECNOT1ENSG00000125107.12chr16-586169595861708658616696586168075861924158619410-0.065000.001250.08564excludedK562SUPV3L1
SECNOT1ENSG00000125107.12chr16-5856182658562009585598925856004258562378585625850.076000.000000.00000includedK562PUS1
SECNOT1ENSG00000125107.12chr16-5865718558657313586332775863341558663631586637890.056000.002030.09411includedHepG2NCBP2
SECNOT1ENSG00000125107.12chr16-5865857658658698586331395863341558663631586637290.090000.000250.05725includedK562GPKOW
SECNOT1ENSG00000125107.12chr16-586585765865869858633139586334155866363158663729-0.058000.000470.01680excludedHepG2SF3A3
SECNOT1ENSG00000125107.12chr16-585618265856200958559892585600425856237858562552-0.075000.000510.07881excludedK562FXR2
SECNOT1ENSG00000125107.12chr16-5865718558657313586332775863341558663631586637890.072000.000850.05836includedHepG2IGF2BP3
SECNOT1ENSG00000125107.12chr16-5865718558657313586332775863341558658556586586980.670000.000160.07385includedHepG2GRSF1
SECNOT1ENSG00000125107.12chr16-585763315857638258576133585762395857751058577807-0.056000.002350.06419excludedK562UTP18
SECNOT1ENSG00000125107.12chr16-586585565865869858657185586573135866363158663719-0.585000.000220.01143excludedK562HNRNPU
SECNOT1ENSG00000125107.12chr16-5856182658562009585598925856004258562378585625850.075000.000000.00000includedK562RBM15
SECNOT1ENSG00000125107.12chr16-5856182658562009585598925856004258562378585625520.063000.000000.00000includedK562AGGF1
SECNOT1ENSG00000125107.12chr16-5865857658658698586331395863341558663631586637290.162000.000290.01466includedHepG2HNRNPC
SECNOT1ENSG00000125107.12chr16-586585765865869858633139586334155866363158663729-0.059000.000430.08273excludedHepG2PRPF4
SECNOT1ENSG00000125107.12chr16-5865718558657313586332775863341558663631586637890.069000.000000.00033includedK562PTBP1
SECNOT1ENSG00000125107.12chr16-5861180658611873586103665861048658612602586128430.063000.000000.00009includedK562HNRNPC
SECNOT1ENSG00000125107.12chr16-5865857658658698586331395863341558663631586637290.213000.000000.00005includedK562HNRNPC
A3SSCNOT1ENSG00000125107.12chr16-5857613358576258585761335857623958576331585765200.081000.000000.00061longerHepG2SF3A3
A3SSCNOT1ENSG00000125107.12chr16-5857613458576258585761345857623958576331585764720.059000.000050.03544longerK562PPIL4
A3SSCNOT1ENSG00000125107.12chr16-5858362258583840585836225858380258585035585851760.136000.000000.00000longerK562AQR
A3SSCNOT1ENSG00000125107.12chr16-5855507558555311585550755855522158557273585574710.077000.000000.00000longerK562AQR
A3SSCNOT1ENSG00000125107.12chr16-5857540458575596585754045857552458576134585762390.230000.000000.00000longerK562AQR
A3SSCNOT1ENSG00000125107.12chr16-5855491858554967585549185855494058555086585553110.063000.000000.00000longerK562AQR
A3SSCNOT1ENSG00000125107.12chr16-5861924158619441586192415861941058620448586206520.123000.000000.00000longerK562AQR
A3SSCNOT1ENSG00000125107.12chr16-5861669658616860586166965861680758616959586170860.076000.000000.00000longerK562AQR
A3SSCNOT1ENSG00000125107.12chr16-5857926458579441585792645857939558580224585804430.084000.000000.00000longerK562AQR
A3SSCNOT1ENSG00000125107.12chr16-5862044858620685586204485862065258621104586213510.065000.000000.00000longerK562AQR
A3SSCNOT1ENSG00000125107.12chr16-5858108958581284585810895858120058581469585816240.134000.000000.00000longerK562AQR
A3SSCNOT1ENSG00000125107.12chr16-5858057558580694585805755858065358581089585812000.114000.000000.00000longerK562AQR
A3SSCNOT1ENSG00000125107.12chr16-5855908258559300585590825855926358559892585600420.218000.000000.00000longerK562AQR
A3SSCNOT1ENSG00000125107.12chr16-585907505859092558590750585908945859237658592578-0.070000.021040.09955shorterK562AQR
A3SSCNOT1ENSG00000125107.12chr16-5857613458576258585761345857623958576331585764720.051000.000010.00350longerK562UTP18
A5SSCNOT1ENSG00000125107.12chr16-5857087158571124585708925857112458568050585682990.072000.000090.02175longerK562TARDBP
A5SSCNOT1ENSG00000125107.12chr16-5859075058590897585907655859089758589687585898120.155000.000030.00893longerK562TARDBP
A5SSCNOT1ENSG00000125107.12chr16-5859075058590897585907655859089758589687585898120.123000.000700.02868longerK562PUS1
A5SSCNOT1ENSG00000125107.12chr16-585907505859089758590765585908975858968758589812-0.135000.000440.00942shorterK562AQR
A5SSCNOT1ENSG00000125107.12chr16-585907505859089758590765585908975858968758589812-0.156000.000060.00396shorterHepG2U2AF2
A5SSCNOT1ENSG00000125107.12chr16-585708715857112458570892585711245856805058568299-0.067000.000520.03390shorterHepG2SRSF1
A5SSCNOT1ENSG00000125107.12chr16-5857087158571124585708925857112458568050585682990.098000.000000.00056longerK562PTBP1
A5SSCNOT1ENSG00000125107.12chr16-5859075058590897585907655859089758589687585898120.161000.000180.09435longerK562ZRANB2
A5SSCNOT1ENSG00000125107.12chr16-5857087158571124585708925857112458568050585682990.093000.000000.00002longerK562FXR1
A5SSCNOT1ENSG00000125107.12chr16-5857087158571124585708925857112458568050585682990.195000.000000.00003longerHepG2PRPF8
A5SSCNOT1ENSG00000125107.12chr16-5857087158571124585708925857112458568050585682990.104000.000120.06077longerHepG2XRN2
RICNOT1ENSG00000125107.12chr16-5857613458576382585761345857623958576331585763820.094000.000000.00000includedK562PUS1
RICNOT1ENSG00000125107.12chr16-5857613458576382585761345857623958576331585763820.063000.000000.00000includedK562AGGF1
RICNOT1ENSG00000125107.12chr16-5857613358576382585761335857625858576331585763820.499000.013090.09554includedK562AKAP8L
RICNOT1ENSG00000125107.12chr16-5857613458576382585761345857623958576331585763820.076000.000000.00000includedK562UTP18
MXECNOT1ENSG00000125107.12chr16-58560362585604125856182658562009585598925856004258562378585625520.111000.002130.036771includedK562PUS1
MXECNOT1ENSG00000125107.12chr16-58576331585764725857751058577807585761345857623958579264585793950.087000.007770.090871includedK562SRSF1
MXECNOT1ENSG00000125107.12chr16-58616959586171035861924158619433586166965861680758620448586206520.077000.000000.000001includedK562AQR
MXECNOT1ENSG00000125107.12chr16-58616959586171035861926458619433586166965861680758620448586206520.068000.000000.000001includedK562AQR
MXECNOT1ENSG00000125107.12chr16-58616959586171035861924158619436586166965861680758620448586206520.052000.000000.000081includedK562AQR
MXECNOT1ENSG00000125107.12chr16-5862168358621782586227025862281058621248586213175863313958633415-0.088000.000560.021152includedK562PPIL4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CNOT1 is not avaliable on ENCORE database.