TNXB

General Information

Gene Name       : TNXB
Gene ID             : ENSG00000168477.19
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TNXB)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TNXBENSG00000168477.190.010.940.47ENCSR000AEF
HepG2TNXBENSG00000168477.191.480.190.83ENCSR985KAT
K562TNXBENSG00000168477.1917.898.3313.11ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TNXB is not avaliable on ENCORE database.



Proteins bound to RNA
  • TNXB RNA is bound by 15 proteins.  







eCLIP assay for TNXB is not avaliable on ENCORE database.





15 proteins are bound to TNXB RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr63208308132083102-3'-UTR,5'-UTR,intron-Distal4.519594.49052K562DDX6
chr63208306532083113-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.812373.25414K562RBFOX2
chr63207697232077026-5'-UTR,intron-Distal,intron-Proximal4.223824.61649HepG2CSTF2T
chr63208307132083116-3'-UTR,5'-UTR,intron-Distal,intron-Proximal5.074827.60978K562UPF1
chr63208306332083110-3'-UTR,5'-UTR,intron-Distal3.267584.02462K562TIA1
chr63201022832010275-CDS,intron-Distal,intron-Proximal3.034703.58206K562LIN28B
chr63201152432011582-CDS,intron-Distal,intron-Proximal4.354063.57832K562TROVE2
chr63207951932079596-intron-Distal3.593895.06208K562MATR3
chr63207632032076400-intron-Distal3.303106.12137K562CSTF2T
chr63208046432080505-intron-Distal3.481064.48652HepG2PTBP1
chr63208046432080597-intron-Distal3.592595.34579HepG2HNRNPK
chr63207768732077777-intron-Distal4.554055.54639K562CSTF2T
chr63208049232080584-intron-Distal3.729315.33544K562MATR3
chr63207962932079700-intron-Distal4.513123.96879HepG2MATR3
chr63208316232083237-3'-UTR,intron-Distal,intron-Proximal3.488157.80696K562APOBEC3C
chr63208151832081578-intron-Distal4.743624.97123HepG2PCBP2
chr63208046732080606-intron-Distal4.7014712.34903HepG2PCBP2
chr63208097432081058-intron-Distal4.461846.59655K562PTBP1
chr63208103232081113-intron-Distal3.915876.57428HepG2PTBP1
chr63207952732079602-intron-Distal3.194903.31127HepG2MATR3
chr63207422032074272-intron-Distal4.805613.31384K562XRN2
chr63208315832083232-3'-UTR,intron-Distal,intron-Proximal4.2412616.96301K562DDX6
chr63207952532079604-intron-Distal3.688038.57718HepG2PTBP1
chr63207667932076748-intron-Distal3.863233.25631HepG2PRPF4
chr63208315532083244-3'-UTR,intron-Distal,intron-Proximal3.897648.62096K562UPF1
chr63207951132079613-intron-Distal4.5614913.12839K562PTBP1
chr63207667632076755-intron-Distal4.419324.27402K562CSTF2T
chr63208316532083221-3'-UTR,intron-Distal,intron-Proximal4.427967.64619HepG2SUB1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TNXB is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TNXB is not available on ENCORE database.

  • 136 RBPs can affect the levels of TNXB.  








The Knockdown/knockout RNA-Seq assay for TNXB is not available on ENCORE database.





136 RBPs can affect the gene expression of TNXB :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TNXBENSG00000168477.13247.6436082.953501.5778015.0086013.63590HepG2AUH
TNXBENSG00000168477.1393.0028052.085200.836302.232301.68950HepG2BOP1
TNXBENSG00000168477.13201.89360108.122500.900803.874702.70690HepG2CCAR1
TNXBENSG00000168477.13121.0647042.120501.523104.373303.42410HepG2DDX55
TNXBENSG00000168477.131322.5352079.206204.0614040.1854038.24650HepG2DDX6
TNXBENSG00000168477.13115.6931035.559601.701908.747907.55260HepG2DNAJC21
TNXBENSG00000168477.1362.1884035.242700.819201.932801.37010HepG2DNAJC2
TNXBENSG00000168477.13215.4398084.008901.358606.767305.76490HepG2EIF4A3
TNXBENSG00000168477.1389.8109051.449400.803602.023401.31940HepG2EIF4G2
TNXBENSG00000168477.13110.5506052.723501.068104.133302.67590HepG2FAM120A
TNXBENSG00000168477.13107.6333054.195200.989802.913402.25780HepG2GPKOW
TNXBENSG00000168477.13165.8187093.018200.833902.407301.48870HepG2HDGF
TNXBENSG00000168477.1319.6566061.29830-1.640803.746302.11680HepG2HLTF
TNXBENSG00000168477.13139.8653039.931401.808303.814803.01130HepG2HNRNPC
TNXBENSG00000168477.13102.7998049.605701.051203.762802.98410HepG2HNRNPL
TNXBENSG00000168477.1395.1574039.667501.262305.031804.23430HepG2HNRNPU
TNXBENSG00000168477.13290.96600137.361301.082805.437303.55160HepG2ILF3
TNXBENSG00000168477.13397.65610128.817201.626103.577002.55770HepG2PABPC1
TNXBENSG00000168477.13139.3054051.536601.434507.044706.15060HepG2PUF60
TNXBENSG00000168477.13272.4500054.666502.3172020.1105018.39960HepG2PUM2
TNXBENSG00000168477.1352.3985099.22000-0.921102.048701.50020HepG2PUS1
TNXBENSG00000168477.13422.02850116.215701.8604015.7626013.98880HepG2RBM15
TNXBENSG00000168477.13179.7588079.605701.175006.776506.05060HepG2RBM22
TNXBENSG00000168477.1375.3978035.326201.093703.231102.54570HepG2SAFB2
TNXBENSG00000168477.1392.1052049.405200.898502.723102.02620HepG2SLBP
TNXBENSG00000168477.1373.2543041.197300.830302.169801.58890HepG2SMN1
TNXBENSG00000168477.13259.0844089.911001.5268014.7831013.86910HepG2SRFBP1
TNXBENSG00000168477.1347.91290102.67110-1.099503.514902.99810HepG2SRSF1
TNXBENSG00000168477.13117.0872050.878801.202305.096704.28790HepG2SRSF5
TNXBENSG00000168477.13606.3871083.537702.8596068.4344066.45030HepG2SRSF9
TNXBENSG00000168477.13247.76720123.315501.006505.213203.65830HepG2STIP1
TNXBENSG00000168477.13173.1586057.868501.5811010.710809.62150HepG2SUCLG1
TNXBENSG00000168477.13119.9652038.548001.637804.345903.74800HepG2TIAL1
TNXBENSG00000168477.13111.1953038.888701.515607.636006.77650HepG2TRIM56
TNXBENSG00000168477.13104.5777050.340801.054703.417102.43420HepG2TUFM
TNXBENSG00000168477.1382.4534043.923600.908502.697402.03350HepG2ZC3H8
TNXBENSG00000168477.132262.192501264.385500.8392013.9174011.32970K562ABCF1
TNXBENSG00000168477.132262.80580723.552601.6448010.939507.75980K562ADAR
TNXBENSG00000168477.13896.80660602.093000.574707.845806.95960K562AGGF1
TNXBENSG00000168477.13862.07310661.624500.381702.926601.90740K562AKAP8
TNXBENSG00000168477.131806.16420626.508801.5274012.2807010.76910K562AKAP8L
TNXBENSG00000168477.131893.651901177.843400.684909.126808.16110K562AQR
TNXBENSG00000168477.132082.56670860.659901.2747053.3618049.82940K562BCLAF1
TNXBENSG00000168477.131877.59550861.474001.1239020.6601018.30790K562BOP1
TNXBENSG00000168477.131594.83700880.805400.8564011.223608.43850K562BUD13
TNXBENSG00000168477.131879.21460708.570001.407007.816005.79700K562CCAR1
TNXBENSG00000168477.131780.28590719.521901.3069035.9529032.50290K562CCDC124
TNXBENSG00000168477.132124.223901612.602400.397403.255601.60960K562CEBPZ
TNXBENSG00000168477.131080.93410459.446701.2342022.3239019.51660K562CIRBP
TNXBENSG00000168477.133992.192501728.896101.2072016.8009013.34610K562CKAP4
TNXBENSG00000168477.132479.055701038.355401.2554013.1098010.83910K562CNOT7
TNXBENSG00000168477.132451.474301426.811500.780806.259504.56070K562CPEB4
TNXBENSG00000168477.131573.58490915.927600.7806013.4276011.68680K562CPSF6
TNXBENSG00000168477.131323.49040652.938601.019209.061907.00880K562CSTF2
TNXBENSG00000168477.133655.691902050.079000.8344020.5293018.16590K562CELF1
TNXBENSG00000168477.131280.27840706.420200.8578012.467609.58510K562DDX19B
TNXBENSG00000168477.131641.78160746.826901.136304.506802.14650K562DDX1
TNXBENSG00000168477.133160.805301853.492600.7699022.7210019.54630K562DDX21
TNXBENSG00000168477.13956.75000760.491600.331102.523501.52940K562DDX3X
TNXBENSG00000168477.131241.982801476.07810-0.249101.984101.41530K562DDX47
TNXBENSG00000168477.131610.98840710.520601.180904.746802.56440K562DDX51
TNXBENSG00000168477.131110.06480771.024300.525706.470204.18910K562DDX6
TNXBENSG00000168477.131847.57540793.309101.2196023.7834020.03350K562DHX30
TNXBENSG00000168477.13503.30110674.14470-0.421603.517002.51250K562DKC1
TNXBENSG00000168477.131647.44210761.925901.1124021.5570018.45830K562DNAJC21
TNXBENSG00000168477.131500.25150680.276201.140902.536801.31870K562EEF2
TNXBENSG00000168477.131620.20880656.900901.302306.501905.05520K562EFTUD2
TNXBENSG00000168477.131117.79740835.275700.420205.298603.59760K562EIF2S1
TNXBENSG00000168477.13463.016901170.93020-1.3385018.8076017.17900K562EIF2S2
TNXBENSG00000168477.13440.19880294.596500.579304.193003.22160K562EIF3G
TNXBENSG00000168477.131291.66010715.473200.8522017.4418014.52870K562EIF4B
TNXBENSG00000168477.132296.107301667.087400.461807.367805.84940K562EIF4G2
TNXBENSG00000168477.131096.54870693.507300.660909.545006.86900K562EWSR1
TNXBENSG00000168477.132825.426901373.761401.0402019.0739015.91650K562EXOSC5
TNXBENSG00000168477.132285.13110909.034801.3298033.8203030.64780K562FIP1L1
TNXBENSG00000168477.13474.05040788.99690-0.735004.627203.10410K562FKBP4
TNXBENSG00000168477.131597.04050932.063200.7768010.732608.99460K562FMR1
TNXBENSG00000168477.131387.95480790.063400.812802.993102.04030K562FTO
TNXBENSG00000168477.13598.21030826.24710-0.465904.968604.19170K562FXR1
TNXBENSG00000168477.1334.99740186.13930-2.4111015.3786013.39910K562G3BP2
TNXBENSG00000168477.131440.73370658.653101.129103.697002.01500K562GEMIN5
TNXBENSG00000168477.132355.158201316.331000.8392021.6517019.03000K562GLRX3
TNXBENSG00000168477.131811.41470874.432401.0506021.2540018.91070K562GPKOW
TNXBENSG00000168477.132316.893501560.204700.570407.878706.59170K562GRSF1
TNXBENSG00000168477.131767.32470931.918400.923204.906202.52190K562HNRNPA0
TNXBENSG00000168477.131003.450901313.34010-0.388303.020301.89510K562HNRNPA1
TNXBENSG00000168477.131808.63830971.920500.895903.088201.41920K562HNRNPAB
TNXBENSG00000168477.132133.47320907.725801.2328031.9116029.94910K562HNRNPC
TNXBENSG00000168477.131594.69330810.864100.975607.083005.18010K562HNRNPF
TNXBENSG00000168477.13512.02050747.77660-0.546402.655201.74460K562HNRNPM
TNXBENSG00000168477.133132.748301454.490901.1068039.4879036.55550K562HNRNPU
TNXBENSG00000168477.13787.633801232.34250-0.645805.151604.08150K562HSPD1
TNXBENSG00000168477.133248.849301854.301400.809006.491003.81490K562IGF2BP1
TNXBENSG00000168477.131212.92640429.009001.499303.715502.45860K562IGF2BP2
TNXBENSG00000168477.13772.27930436.225900.823906.454904.51830K562IGF2BP3
TNXBENSG00000168477.131107.77180740.352200.581305.510303.40460K562ILF3
TNXBENSG00000168477.131518.83200715.304001.0862010.559907.81380K562KHDRBS1
TNXBENSG00000168477.131010.67090664.869200.604106.831305.39760K562KIF1C
TNXBENSG00000168477.131471.92630746.795400.978803.468302.40840K562KRR1
TNXBENSG00000168477.13833.89040636.454200.389703.160101.99040K562MAK16
TNXBENSG00000168477.13538.69120744.82330-0.467403.559502.50970K562MBNL1
TNXBENSG00000168477.131815.62110853.566001.0888019.6034017.20620K562METAP2
TNXBENSG00000168477.134135.098201776.905301.218508.201006.30540K562MSI2
TNXBENSG00000168477.132312.583301383.920300.740606.491705.30130K562MTPAP
TNXBENSG00000168477.13895.48970522.068400.778302.054801.31770K562NAA15
TNXBENSG00000168477.131572.52990648.827801.277105.550303.56790K562NONO
TNXBENSG00000168477.134101.286101537.828301.4151077.3309074.35430K562NSUN2
TNXBENSG00000168477.132376.59040997.560301.2523013.6628010.97240K562PABPC1
TNXBENSG00000168477.131206.93010558.969001.110406.169704.51530K562PABPN1
TNXBENSG00000168477.131510.36180710.426701.088004.750502.02560K562PARN
TNXBENSG00000168477.13605.35670440.557600.458403.261101.78930K562PCBP1
TNXBENSG00000168477.13860.68570400.807701.102505.744404.32550K562PCBP2
TNXBENSG00000168477.131350.75470622.755801.116904.047101.81140K562PES1
TNXBENSG00000168477.131504.076101032.053200.543303.500002.55890K562PPIG
TNXBENSG00000168477.13718.27670437.751900.714308.421907.30400K562PTBP1
TNXBENSG00000168477.132752.114001895.580400.5378010.218708.35080K562PUM2
TNXBENSG00000168477.132280.23300621.297901.8757012.4158011.31230K562PUS1
TNXBENSG00000168477.131384.69600755.998400.873006.577803.48420K562RBFOX2
TNXBENSG00000168477.131267.96410605.383501.0665024.6784022.83120K562RBM15
TNXBENSG00000168477.13822.80860419.570300.9715013.4401011.39480K562RBM22
TNXBENSG00000168477.13310.75060176.404400.816803.251301.80040K562RBM25
TNXBENSG00000168477.13890.05060409.139901.1212011.293608.22160K562RBM34
TNXBENSG00000168477.131352.44970742.972600.864107.792406.12730K562RCC2
TNXBENSG00000168477.13748.21380441.573100.760704.428403.00970K562NELFE
TNXBENSG00000168477.131761.930101151.931900.613005.696103.12230K562SAFB2
TNXBENSG00000168477.132406.89170945.921301.3473015.6263012.22360K562SBDS
TNXBENSG00000168477.133160.721201517.193401.0587039.6298037.02900K562SF3A3
TNXBENSG00000168477.13291.66550193.410600.592503.618502.63590K562SF3B4
TNXBENSG00000168477.131962.46340780.300601.3305030.7297027.14400K562SLBP
TNXBENSG00000168477.131708.81210972.010500.813803.183701.30170K562SMN1
TNXBENSG00000168477.13158.38200270.52190-0.772304.889502.62200K562SND1
TNXBENSG00000168477.131038.79720704.281600.560605.410803.83360K562SRFBP1
TNXBENSG00000168477.131491.92320638.954501.223305.540403.13730K562SRP68
TNXBENSG00000168477.132454.181201554.374800.658808.682007.12490K562SRPK2
TNXBENSG00000168477.13296.57730429.18010-0.533202.486301.80950K562SRSF1
TNXBENSG00000168477.131252.82640767.334400.707202.612701.59600K562SRSF4
TNXBENSG00000168477.13718.81110405.420700.826109.230007.20470K562SRSF5
TNXBENSG00000168477.132058.917901654.073100.315803.954202.53440K562SRSF7
TNXBENSG00000168477.131799.491001090.699700.722208.126105.92330K562STAU1
TNXBENSG00000168477.132145.278201586.975300.434805.592303.55020K562SUCLG1
TNXBENSG00000168477.131889.91520618.108001.612306.927305.26910K562SUPV3L1
TNXBENSG00000168477.13592.793201344.42150-1.181406.870105.56490K562SYNCRIP
TNXBENSG00000168477.131433.85220434.277901.723107.115505.92630K562TARDBP
TNXBENSG00000168477.131225.09730563.949501.119204.123602.09050K562TFIP11
TNXBENSG00000168477.13800.62940418.931200.9343013.4575011.52900K562TIA1
TNXBENSG00000168477.131432.56740782.835700.8717011.235609.23850K562TIAL1
TNXBENSG00000168477.13889.02500411.286401.1120016.9199013.66560K562TRA2A
TNXBENSG00000168477.131771.09470832.056301.089802.528501.63030K562TRIM56
TNXBENSG00000168477.131757.246501062.932800.725209.528106.86480K562TRIP6
TNXBENSG00000168477.134628.928502282.162301.0202050.2652046.34650K562TROVE2
TNXBENSG00000168477.133410.736102050.959600.7337013.1294010.47410K562UBE2L3
TNXBENSG00000168477.131788.10230654.606701.449608.727006.84240K562UCHL5
TNXBENSG00000168477.132954.645901630.578600.8575023.7698021.92200K562UPF1
TNXBENSG00000168477.131618.27890629.958601.361003.269001.82680K562UTP18
TNXBENSG00000168477.131773.798901185.245600.581605.447603.76860K562UTP3
TNXBENSG00000168477.133191.091701395.256401.193409.592107.92100K562WDR3
TNXBENSG00000168477.132150.587101450.755200.5678010.112208.60970K562WDR43
TNXBENSG00000168477.131912.245501395.899800.454005.346503.54930K562WRN
TNXBENSG00000168477.131721.51720667.228101.367307.491105.20550K562XRN2
TNXBENSG00000168477.134140.706201326.696401.6419059.5037055.78430K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TNXB is not available on ENCORE database.






No RBPs affect the alternative splcing events of TNXB on ENCORE database.





The Knockdown/knockout RNA-Seq assay for TNXB is not avaliable on ENCORE database.