RNF144A

General Information

Gene Name       : RNF144A
Gene ID             : ENSG00000151692.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RNF144A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RNF144AENSG00000151692.140.340.330.34ENCSR000AEF
HepG2RNF144AENSG00000151692.148.8810.679.78ENCSR985KAT
K562RNF144AENSG00000151692.144.414.974.69ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RNF144A is not avaliable on ENCORE database.



Proteins bound to RNA
  • RNF144A RNA is bound by 8 proteins.  







eCLIP assay for RNF144A is not avaliable on ENCORE database.





8 proteins are bound to RNF144A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr271815947181722+3'-UTR,intron-Distal3.609696.98582K562UPF1
chr271835037183581+3'-UTR,intron-Distal3.256105.75802K562UPF1
chr271822317182311+3'-UTR,intron-Distal4.215446.14808K562UPF1
chr270576087057706+5'-UTR4.0555011.11007HepG2DDX3X
chr271605987160717+CDS,intron-Proximal3.196665.41373HepG2PPIG
chr271702577170358+CDS,intron-Proximal4.053985.24452HepG2PPIG
chr271370747137178+CDS,intron-Distal3.458494.24993HepG2PPIG
chr272002887200360+intron-Distal4.501554.03269HepG2PTBP1
chr271614807161650+intron-Distal4.193474.33022HepG2HNRNPK
chr271467647146874+intron-Distal3.849593.06084HepG2HNRNPK
chr271604057160495+intron-Distal3.741533.14375HepG2RBFOX2
chr270904507090630+intron-Distal3.8449610.16833K562KHSRP
chr270903797090497+intron-Distal3.735314.23286HepG2QKI
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RNF144A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RNF144A is not available on ENCORE database.

  • 147 RBPs can affect the levels of RNF144A.  








The Knockdown/knockout RNA-Seq assay for RNF144A is not available on ENCORE database.





147 RBPs can affect the gene expression of RNF144A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RNF144AENSG00000151692.10532.16420753.79000-0.502304.058702.78410HepG2AATF
RNF144AENSG00000151692.10678.64550931.92670-0.457606.081305.25040HepG2ACO1
RNF144AENSG00000151692.10607.76800995.82970-0.712405.924405.17990HepG2AKAP1
RNF144AENSG00000151692.10552.49340748.31240-0.437702.598701.59090HepG2AKAP8
RNF144AENSG00000151692.101120.54380936.320000.259002.379401.66250HepG2AKAP8L
RNF144AENSG00000151692.10527.87700789.96800-0.581604.046502.91450HepG2BCCIP
RNF144AENSG00000151692.10493.41440686.39560-0.476202.991702.05530HepG2BCLAF1
RNF144AENSG00000151692.10124.72030725.16080-2.5396054.9186052.94250HepG2BOP1
RNF144AENSG00000151692.10725.52780885.46260-0.287402.068901.39540HepG2CALR
RNF144AENSG00000151692.10372.46600782.81720-1.0716013.0417011.49910HepG2CIRBP
RNF144AENSG00000151692.10716.28820931.74200-0.379404.637403.81930HepG2CKAP4
RNF144AENSG00000151692.10327.23200547.80840-0.743404.089703.15240HepG2CNOT7
RNF144AENSG00000151692.10597.78100858.50420-0.522205.011403.54770HepG2CPSF7
RNF144AENSG00000151692.10668.32280929.98050-0.476705.464804.03470HepG2YBX3
RNF144AENSG00000151692.101533.697001145.816800.420506.832305.74390HepG2DAZAP1
RNF144AENSG00000151692.10561.71340931.26540-0.7294010.879108.82690HepG2DDX1
RNF144AENSG00000151692.10314.79550588.35210-0.902308.340306.14300HepG2DDX28
RNF144AENSG00000151692.10535.92240953.90640-0.831808.722707.66520HepG2DDX3X
RNF144AENSG00000151692.10370.58930611.94220-0.723606.738204.79530HepG2DDX47
RNF144AENSG00000151692.10582.25060776.71550-0.415702.357401.63690HepG2DDX55
RNF144AENSG00000151692.101194.00830755.985800.659303.583602.47370HepG2DDX59
RNF144AENSG00000151692.10574.42570919.80820-0.679206.956605.41450HepG2DDX5
RNF144AENSG00000151692.10365.51830819.47980-1.1648013.3169012.08550HepG2DDX6
RNF144AENSG00000151692.10421.40730891.60590-1.0812022.6575021.17290HepG2DKC1
RNF144AENSG00000151692.10672.02220913.15320-0.442304.762803.86220HepG2DNAJC21
RNF144AENSG00000151692.10672.14180905.11590-0.429305.874104.97630HepG2DNAJC2
RNF144AENSG00000151692.10490.54030683.71400-0.479003.204102.01170HepG2EFTUD2
RNF144AENSG00000151692.10484.95580665.74340-0.457102.541101.67080HepG2EIF3D
RNF144AENSG00000151692.10628.94920847.61360-0.430502.122101.51670HepG2EIF4B
RNF144AENSG00000151692.10276.56740478.20780-0.790004.059701.60460HepG2FASTKD1
RNF144AENSG00000151692.10566.33930814.79140-0.524803.710102.94340HepG2G3BP1
RNF144AENSG00000151692.101021.41160592.774000.784905.361204.10920HepG2GEMIN5
RNF144AENSG00000151692.10659.10860995.00650-0.594203.537001.76350HepG2GTF2F1
RNF144AENSG00000151692.10656.98670889.73400-0.437505.345604.03380HepG2HDGF
RNF144AENSG00000151692.10680.19690921.90170-0.438703.448302.73670HepG2HNRNPA1
RNF144AENSG00000151692.10775.282801053.00140-0.441705.534704.29220HepG2HNRNPA2B1
RNF144AENSG00000151692.10732.872901025.45390-0.484604.232203.38790HepG2HNRNPC
RNF144AENSG00000151692.10254.14770474.49700-0.900706.540904.25200HepG2HNRNPD
RNF144AENSG00000151692.10465.43270825.14730-0.826108.962607.76120HepG2HNRNPK
RNF144AENSG00000151692.10775.017201043.77470-0.429506.313505.33490HepG2HNRNPL
RNF144AENSG00000151692.10558.05070720.15830-0.367902.113001.55520HepG2HNRNPLL
RNF144AENSG00000151692.10534.175301018.67360-0.9313020.9231019.36220HepG2HNRNPU
RNF144AENSG00000151692.10353.42570828.20280-1.2286016.9321015.43080HepG2IGF2BP2
RNF144AENSG00000151692.10454.88400833.05820-0.872907.319205.60180HepG2KHSRP
RNF144AENSG00000151692.10648.44170851.90890-0.393704.722203.39740HepG2KIF1C
RNF144AENSG00000151692.10496.89700840.30520-0.758006.799504.27960HepG2LSM11
RNF144AENSG00000151692.101218.36860878.694300.471403.643702.89090HepG2MAGOH
RNF144AENSG00000151692.10506.05740709.29730-0.487103.392601.61960HepG2MARK2
RNF144AENSG00000151692.10443.59290696.79760-0.651502.877901.80420HepG2METAP2
RNF144AENSG00000151692.10598.58990851.93670-0.509204.718403.68330HepG2MSI2
RNF144AENSG00000151692.10529.40110904.40260-0.772607.351806.34330HepG2NCBP2
RNF144AENSG00000151692.10530.33030757.29920-0.514004.013302.29190HepG2NIP7
RNF144AENSG00000151692.10546.32530772.23520-0.499302.752301.32730HepG2NKRF
RNF144AENSG00000151692.10721.812901136.18550-0.654509.939408.52360HepG2NOL12
RNF144AENSG00000151692.10231.00500500.64000-1.115807.410805.90890HepG2PABPC1
RNF144AENSG00000151692.10349.29410805.38140-1.2052015.8222014.15250HepG2PABPC4
RNF144AENSG00000151692.10823.811901008.30160-0.291502.710201.86980HepG2PARN
RNF144AENSG00000151692.10345.09250824.63150-1.2568028.8035027.19690HepG2PCBP1
RNF144AENSG00000151692.10629.65220908.57390-0.529006.483705.39060HepG2PPIL4
RNF144AENSG00000151692.10379.83660768.82590-1.0173018.8926017.18800HepG2PRPF4
RNF144AENSG00000151692.10816.64080599.105100.446802.815001.99930HepG2PRPF8
RNF144AENSG00000151692.10595.00760839.06750-0.495905.827805.09280HepG2PTBP1
RNF144AENSG00000151692.10513.804201151.29090-1.1640037.3116035.64140HepG2PUM1
RNF144AENSG00000151692.10413.82080949.23040-1.1978031.8682030.19870HepG2PUS1
RNF144AENSG00000151692.10263.18400908.78600-1.7879045.3357043.38460HepG2QKI
RNF144AENSG00000151692.10805.997101215.44270-0.592607.936406.58820HepG2RBM15
RNF144AENSG00000151692.10611.46630824.76080-0.431703.634602.86830HepG2RBM25
RNF144AENSG00000151692.10294.82010529.03080-0.843505.783303.59800HepG2RBM47
RNF144AENSG00000151692.10732.75000869.69020-0.247201.945301.41630HepG2RECQL
RNF144AENSG00000151692.10719.54460890.82720-0.308102.229901.60740HepG2RPLP0
RNF144AENSG00000151692.10558.81020947.39850-0.761605.335804.04660HepG2RPS10
RNF144AENSG00000151692.10709.03350931.41160-0.393602.539801.77170HepG2RPS2
RNF144AENSG00000151692.10270.86940592.63220-1.1295011.141009.72860HepG2RRP9
RNF144AENSG00000151692.10619.63640907.16870-0.549908.153807.13480HepG2SAFB2
RNF144AENSG00000151692.10355.11150517.83890-0.544203.097301.71540HepG2SART3
RNF144AENSG00000151692.10352.33600712.79960-1.0165012.0412010.66610HepG2SF3B1
RNF144AENSG00000151692.10631.31780873.62400-0.468605.352204.57540HepG2SF3B4
RNF144AENSG00000151692.10888.931301039.87950-0.226302.149201.51700HepG2SLBP
RNF144AENSG00000151692.10845.473901057.90340-0.323403.944003.19830HepG2SMN1
RNF144AENSG00000151692.10591.71840983.64010-0.733205.745604.32930HepG2SMNDC1
RNF144AENSG00000151692.10379.83260793.11990-1.062206.995805.74670HepG2SNRNP70
RNF144AENSG00000151692.10950.170501249.28290-0.394803.228502.70050HepG2SRFBP1
RNF144AENSG00000151692.10519.57950741.82660-0.513706.365405.58950HepG2SRSF9
RNF144AENSG00000151692.101330.187701084.731700.294203.575003.00870HepG2SSB
RNF144AENSG00000151692.10418.67240703.08270-0.747905.659903.95500HepG2STAU1
RNF144AENSG00000151692.10529.23770901.20950-0.767905.176803.53230HepG2SUB1
RNF144AENSG00000151692.10510.04380773.18860-0.600204.374603.55210HepG2SUPV3L1
RNF144AENSG00000151692.10416.52360819.55860-0.9764016.7914015.57700HepG2TAF15
RNF144AENSG00000151692.10338.32470701.99940-1.0531012.8663011.48000HepG2TARDBP
RNF144AENSG00000151692.10344.27420518.22910-0.590003.841702.68750HepG2TFIP11
RNF144AENSG00000151692.10489.58720753.11840-0.621306.709305.41170HepG2TIA1
RNF144AENSG00000151692.10655.80290989.79910-0.593907.483506.73460HepG2TIAL1
RNF144AENSG00000151692.10555.72720998.68220-0.8456018.0536016.77830HepG2TRIM56
RNF144AENSG00000151692.10310.36880529.04450-0.769405.536303.37520HepG2TROVE2
RNF144AENSG00000151692.10812.316101059.53530-0.383303.348202.38000HepG2TUFM
RNF144AENSG00000151692.10222.43780456.73280-1.037909.922108.48450HepG2UCHL5
RNF144AENSG00000151692.10609.43660899.89960-0.562308.233307.13500HepG2UPF1
RNF144AENSG00000151692.10458.17620707.95190-0.627703.810102.61780HepG2UPF2
RNF144AENSG00000151692.10479.13040868.82310-0.8586015.5056014.25990HepG2UTP3
RNF144AENSG00000151692.10264.46910492.54410-0.897206.548104.87040HepG2XPO5
RNF144AENSG00000151692.10746.24780989.72230-0.407403.003302.44060HepG2ZNF622
RNF144AENSG00000151692.10694.52860462.277000.587204.791903.16070K562ABCF1
RNF144AENSG00000151692.10394.15560702.69500-0.834109.603108.29630K562AKAP8L
RNF144AENSG00000151692.10428.73190737.26490-0.7821011.194309.18800K562ATP5C1
RNF144AENSG00000151692.10460.15100318.543000.530504.481903.24400K562BCLAF1
RNF144AENSG00000151692.10459.26820253.718700.856004.288803.19500K562BOP1
RNF144AENSG00000151692.10540.96340807.11040-0.577204.463402.92600K562CCDC124
RNF144AENSG00000151692.10491.87780356.970900.462403.200601.56740K562CEBPZ
RNF144AENSG00000151692.10671.02630453.661300.564703.809102.07310K562CKAP4
RNF144AENSG00000151692.10760.35930361.430201.072907.939506.09060K562CNOT7
RNF144AENSG00000151692.10722.02540269.759501.4203024.6220022.25230K562CPSF6
RNF144AENSG00000151692.10384.88650241.662200.671304.827303.37520K562CSTF2
RNF144AENSG00000151692.101469.45140752.815200.9648019.8981017.55670K562CELF1
RNF144AENSG00000151692.10499.53650792.34580-0.665506.824104.52050K562DDX19B
RNF144AENSG00000151692.10549.32790410.299100.420902.909501.66490K562DDX21
RNF144AENSG00000151692.10731.47170447.982900.707309.937708.79330K562DDX47
RNF144AENSG00000151692.10559.66010756.25410-0.434304.083102.98950K562DKC1
RNF144AENSG00000151692.10477.22440289.987900.718605.587304.26340K562EFTUD2
RNF144AENSG00000151692.10458.42630353.948300.373102.598301.43590K562EIF2S1
RNF144AENSG00000151692.10659.80690395.779700.737209.577908.36310K562EIF2S2
RNF144AENSG00000151692.10643.13080332.379100.9522011.306709.47200K562FIP1L1
RNF144AENSG00000151692.10659.87560274.505301.2653016.6860014.50840K562FMR1
RNF144AENSG00000151692.10655.48920232.681601.4941020.9408018.27260K562FTO
RNF144AENSG00000151692.10502.73390290.732900.790006.197904.07490K562GEMIN5
RNF144AENSG00000151692.10417.50020314.126500.410302.627201.51520K562GLRX3
RNF144AENSG00000151692.10556.20480257.541001.1107012.8594011.12960K562GPKOW
RNF144AENSG00000151692.10772.61740527.482500.550504.869403.86850K562GRSF1
RNF144AENSG00000151692.10484.07060297.546500.702005.669704.84550K562HNRNPC
RNF144AENSG00000151692.10290.64170404.86180-0.478202.923001.83340K562HNRNPL
RNF144AENSG00000151692.10387.97560273.429500.504702.601001.70200K562HNRNPM
RNF144AENSG00000151692.10833.59410450.575400.8875010.675609.13860K562HSPD1
RNF144AENSG00000151692.10612.96610410.483300.578403.641401.49290K562IGF2BP1
RNF144AENSG00000151692.10266.75120367.65920-0.462902.692001.52220K562IGF2BP3
RNF144AENSG00000151692.10603.29580329.916200.870704.798402.89330K562ILF2
RNF144AENSG00000151692.10512.95980745.79310-0.539903.734402.75640K562KIF1C
RNF144AENSG00000151692.10393.66750219.941900.839804.840703.56400K562KRR1
RNF144AENSG00000151692.10512.82720379.894300.432802.911202.04880K562MAGOH
RNF144AENSG00000151692.10624.65380251.394201.313009.028007.37430K562METAP2
RNF144AENSG00000151692.10670.35040330.266901.0212017.4250015.64170K562MTPAP
RNF144AENSG00000151692.10369.28480585.59780-0.665204.113802.98050K562NAA15
RNF144AENSG00000151692.10590.94850366.934300.687408.863407.63010K562NSUN2
RNF144AENSG00000151692.102038.03410570.744501.8362044.8826041.99710K562PCBP3
RNF144AENSG00000151692.101575.94390437.791001.8478042.1207039.44600K562POLR2G
RNF144AENSG00000151692.10490.48370710.55570-0.534704.569803.17300K562PUM1
RNF144AENSG00000151692.10979.10940696.287300.491705.925904.50370K562PUM2
RNF144AENSG00000151692.10387.06700696.99920-0.848608.691707.77790K562PUS1
RNF144AENSG00000151692.10430.11400679.02240-0.658707.431306.49060K562RBM15
RNF144AENSG00000151692.10476.11770353.921200.427802.604601.79110K562RBM22
RNF144AENSG00000151692.10242.54820344.99960-0.508302.629901.30580K562RBM34
RNF144AENSG00000151692.10417.73220287.439700.539202.841202.01370K562RPS19
RNF144AENSG00000151692.10423.17830288.524600.552502.594201.31010K562RRP9
RNF144AENSG00000151692.10648.71890347.961300.898603.209501.88960K562SF1
RNF144AENSG00000151692.10725.68980362.103101.0029017.0905015.20070K562SF3A3
RNF144AENSG00000151692.10706.68460244.977901.5283020.3921017.74960K562SF3B1
RNF144AENSG00000151692.10455.05570325.950900.481303.434602.47760K562SF3B4
RNF144AENSG00000151692.10694.87550424.204100.711902.782801.47870K562SFPQ
RNF144AENSG00000151692.10289.30900192.548000.587303.093901.75250K562SLBP
RNF144AENSG00000151692.10524.40350338.201200.632703.332801.39310K562SMN1
RNF144AENSG00000151692.10562.38370370.985400.600106.521405.15480K562SRPK2
RNF144AENSG00000151692.10607.34400366.161900.729908.790506.70770K562SRSF7
RNF144AENSG00000151692.10574.50270398.773800.526603.513902.07170K562STAU1
RNF144AENSG00000151692.10798.78130582.936500.454404.332602.48600K562SUCLG1
RNF144AENSG00000151692.10968.98210477.998401.019405.226103.05840K562SUPT6H
RNF144AENSG00000151692.10560.11580273.214801.035609.695007.73330K562SUPV3L1
RNF144AENSG00000151692.10238.28620366.19870-0.619903.894803.04870K562TARDBP
RNF144AENSG00000151692.10590.36160388.580400.603303.136301.64150K562TRIP6
RNF144AENSG00000151692.10383.16610529.35000-0.466304.033402.49710K562TROVE2
RNF144AENSG00000151692.10527.93840303.851200.796906.280304.49160K562U2AF1
RNF144AENSG00000151692.10530.69270313.813200.757907.812006.45260K562U2AF2
RNF144AENSG00000151692.10595.93620289.168201.0431011.106109.02010K562UCHL5
RNF144AENSG00000151692.10661.81690411.707300.684705.496503.81170K562UTP3
RNF144AENSG00000151692.10481.35850332.912000.531904.005902.94700K562WDR3
RNF144AENSG00000151692.10620.35980346.209300.8414013.0292011.35360K562WDR43
RNF144AENSG00000151692.101132.59290570.329600.9897016.8551014.14410K562WRN
RNF144AENSG00000151692.10855.40130542.303600.657407.060605.57420K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RNF144A is not available on ENCORE database.






No RBPs affect the alternative splcing events of RNF144A on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RNF144A is not avaliable on ENCORE database.