ITFG1

General Information

Gene Name       : ITFG1
Gene ID             : ENSG00000129636.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ITFG1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ITFG1ENSG00000129636.1223.0520.1721.61ENCSR000AEF
HepG2ITFG1ENSG00000129636.1248.8086.3167.56ENCSR985KAT
K562ITFG1ENSG00000129636.1236.6741.1138.89ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ITFG1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ITFG1 RNA is bound by 29 proteins.  







eCLIP assay for ITFG1 is not avaliable on ENCORE database.





29 proteins are bound to ITFG1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr164718930247189429-3'-UTR,intron-Distal,intron-Proximal6.085899.17142K562PUM2
chr164718931447189403-3'-UTR,intron-Distal,intron-Proximal5.8175312.37476HepG2FUBP3
chr164718940347189469-3'-UTR,intron-Distal,intron-Proximal3.127283.18141HepG2FUBP3
chr164718934847189443-3'-UTR,intron-Distal,intron-Proximal4.151007.14815HepG2DDX55
chr164718939647189453-3'-UTR,intron-Distal,intron-Proximal3.483175.80891HepG2LARP4
chr164749489747494991-5'-UTR,CDS,intron-Distal5.45909400.00000HepG2DDX3X
chr164719565847195742-CDS,intron-Distal,intron-Proximal4.222264.77152K562IGF2BP1
chr164729454947294607-CDS,intron-Distal,intron-Proximal3.661853.02250K562YBX3
chr164727187447271921-CDS,intron-Distal,intron-Proximal3.250403.17233HepG2BCLAF1
chr164734520347345293-CDS,intron-Distal3.076134.00731K562UCHL5
chr164740978747409848-CDS,intron-Distal3.758645.52342HepG2PPIG
chr164749469147494758-CDS,intron-Distal3.699564.83899HepG2PRPF8
chr164734763947347732-CDS,intron-Distal,intron-Proximal3.267144.30396K562UCHL5
chr164729257547292652-CDS,intron-Distal,intron-Proximal4.359827.53358HepG2BCLAF1
chr164734763547347666-CDS,intron-Distal,intron-Proximal3.695873.34848HepG2PPIG
chr164739969347399779-CDS,intron-Distal,intron-Proximal3.008884.87174HepG2PPIG
chr164749478947494839-CDS,intron-Distal6.8424631.14351HepG2DDX3X
chr164749475347494848-CDS,intron-Distal3.659435.59242K562DDX3X
chr164729445247294484-CDS,intron-Distal,intron-Proximal3.506503.29945HepG2LIN28B
chr164748535347485382-CDS,intron-Distal,intron-Proximal4.337627.53358HepG2BCLAF1
chr164729262547292651-CDS,intron-Distal,intron-Proximal4.291183.70369HepG2LIN28B
chr164734528647345329-CDS,intron-Distal,intron-Proximal3.620223.93645HepG2PPIG
chr164734763847347679-CDS,intron-Distal,intron-Proximal3.520797.89260HepG2BCLAF1
chr164749484947494888-CDS,intron-Distal5.1673347.51244HepG2DDX3X
chr164738216047382209-intron-Distal4.304794.03915HepG2SUGP2
chr164732653147326592-intron-Distal4.263923.22788K562XRCC6
chr164737392847373979-intron-Distal3.233483.59523HepG2SUGP2
chr164732992047329982-intron-Distal3.883483.25970K562PPIL4
chr164733017647330242-intron-Distal3.738603.43228K562SAFB2
chr164731484047314907-intron-Distal3.872703.10466K562SAFB2
chr164743117647431261-intron-Distal4.1671911.17441HepG2PCBP2
chr164738078947380877-intron-Distal3.061514.40773HepG2SUGP2
chr164737544147375519-intron-Distal3.793324.22415K562PTBP1
chr164747625647476348-intron-Distal3.626754.02190K562EXOSC5
chr164727832947278430-intron-Distal3.6663210.54997HepG2HNRNPL
chr164731756647317645-intron-Distal3.814603.54264K562SAFB2
chr164738076747380893-intron-Distal3.939708.54189HepG2MATR3
chr164746260647462666-intron-Distal,intron-Proximal4.077093.90026K562KHSRP
chr164727852947278571-intron-Distal4.4468113.61511HepG2HNRNPL
chr164739292547392965-intron-Distal4.518184.57427HepG2PCBP2
chr164727833647278395-intron-Distal3.923048.43371K562AGGF1
chr164737474747374952-intron-Distal3.514575.35459K562KHSRP
chr164737407247374112-intron-Distal3.724053.04224HepG2SUGP2
chr164744572147445805-intron-Distal3.770023.16028HepG2SUGP2
chr164724790647247990-intron-Distal3.570984.51091HepG2HNRNPL
chr164727857147278624-intron-Distal4.7706116.94758HepG2HNRNPL
chr164738216747382227-intron-Distal4.240063.62238HepG2MATR3
chr164733302447333123-intron-Distal4.195725.07394K562PPIL4
chr164743424047434300-intron-Distal4.021133.91772K562TARDBP
chr164735555747355686-intron-Distal3.175014.18967K562KHSRP
chr164727868847278749-intron-Distal3.256274.05663K562HNRNPL
chr164737378647373847-intron-Distal3.123034.21501HepG2MATR3
chr164738083347380881-intron-Distal4.593615.16513HepG2HNRNPM
chr164729244247292512-intron-Distal,intron-Proximal3.436386.75956HepG2U2AF2
chr164744655247446610-intron-Distal3.599963.03357HepG2HNRNPC
chr164743457147434672-intron-Distal4.026676.14899HepG2PCBP2
chr164737597247376053-intron-Distal3.100094.67779HepG2SUGP2
chr164732652847326581-intron-Distal3.922473.54264K562SAFB2
chr164737527247375315-intron-Distal4.521275.58061HepG2SUGP2
chr164719082047190939-intron-Distal3.582013.00914HepG2PTBP1
chr164729177447291821-intron-Distal3.466593.62357HepG2U2AF2
chr164732837247328475-intron-Distal4.105424.01468K562HLTF
chr164727856147278596-intron-Distal3.729118.16843K562AGGF1
chr164722646547226544-intron-Distal4.133843.55640HepG2QKI
chr164727853747278615-intron-Distal3.571658.17198K562HNRNPL
chr164733006647330176-intron-Distal4.357515.20871K562SAFB2
chr164724350047243638-intron-Distal3.530225.32588K562SAFB2
chr164738079647380889-intron-Distal4.490814.48560K562EXOSC5
chr164727834047278427-intron-Distal5.2832610.01120K562HNRNPL
chr164737349447373588-intron-Distal3.478284.28254HepG2MATR3
chr164738082147380876-intron-Distal4.719743.28572K562HNRNPM
chr164733019047330258-intron-Distal4.117363.04254K562UCHL5
chr164731664647316714-intron-Distal3.716733.10466K562SAFB2
chr164735556247355679-intron-Distal4.804107.22833HepG2KHSRP
chr164737712047377209-intron-Distal3.405603.84025HepG2SUGP2
chr164739042947390570-intron-Distal4.316464.92524K562TARDBP
chr164737486847374938-intron-Distal4.233483.84389HepG2SUGP2
chr164732989847329978-intron-Distal3.258164.15505K562SAFB2
chr164727864447278688-intron-Distal4.126874.71638K562HNRNPL
chr164738132947381434-intron-Distal4.707256.32237HepG2SUGP2
chr164724789547248004-intron-Distal3.264683.84589K562HNRNPL
chr164727676547276870-intron-Distal4.135233.45317HepG2HNRNPL
chr164736567647365744-intron-Distal5.052396.58335HepG2QKI
chr164737376747373841-intron-Distal3.361873.84025HepG2SUGP2
chr164719083947190999-intron-Distal3.944637.80454K562PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ITFG1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ITFG1 is not available on ENCORE database.

  • 102 RBPs can affect the levels of ITFG1.  








The Knockdown/knockout RNA-Seq assay for ITFG1 is not available on ENCORE database.





102 RBPs can affect the gene expression of ITFG1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ITFG1ENSG00000129636.82339.718301851.235000.337702.998901.88750HepG2AATF
ITFG1ENSG00000129636.82164.206102953.80650-0.448704.085302.95600HepG2ABCF1
ITFG1ENSG00000129636.82875.559102319.594700.309905.276004.48950HepG2ACO1
ITFG1ENSG00000129636.87868.683103939.847200.9979016.1994015.02180HepG2AKAP1
ITFG1ENSG00000129636.84175.679102911.367100.520203.942802.70420HepG2AKAP8
ITFG1ENSG00000129636.83280.520902665.639400.299302.760801.35860HepG2ATP5C1
ITFG1ENSG00000129636.85327.554403043.851100.8075033.2925031.38250HepG2AUH
ITFG1ENSG00000129636.82150.391701695.783000.342502.534901.67310HepG2BCLAF1
ITFG1ENSG00000129636.84144.364702461.650500.7514013.7369012.54560HepG2BOP1
ITFG1ENSG00000129636.85381.757702754.924700.9660029.5059027.53500HepG2CALR
ITFG1ENSG00000129636.84158.301402714.307500.615304.152703.20910HepG2CNOT7
ITFG1ENSG00000129636.84230.935102259.928800.9046018.1044016.52880HepG2CPSF6
ITFG1ENSG00000129636.83016.687802432.604700.310403.118701.94550HepG2CPSF7
ITFG1ENSG00000129636.84496.257002898.549300.6333015.7584014.47130HepG2CELF1
ITFG1ENSG00000129636.83636.250403116.922900.222203.478802.66500HepG2DAZAP1
ITFG1ENSG00000129636.81704.370402145.25090-0.331905.817604.66730HepG2DDX19B
ITFG1ENSG00000129636.82860.561502345.956300.286003.537402.22880HepG2DDX1
ITFG1ENSG00000129636.82610.463102043.180800.353403.347802.60660HepG2DDX21
ITFG1ENSG00000129636.82550.856101998.823400.351703.789302.70840HepG2DDX24
ITFG1ENSG00000129636.86506.093903774.155100.7855012.0014010.78290HepG2DDX3X
ITFG1ENSG00000129636.84034.874502566.315300.652703.878302.73090HepG2DDX59
ITFG1ENSG00000129636.84267.249603241.890000.396402.975802.33740HepG2DDX6
ITFG1ENSG00000129636.81739.234802219.20000-0.351605.399804.51110HepG2DKC1
ITFG1ENSG00000129636.83471.162302300.351900.5935014.1188012.62760HepG2DNAJC21
ITFG1ENSG00000129636.82512.916601926.205600.383503.366702.13970HepG2EFTUD2
ITFG1ENSG00000129636.82766.837401880.975500.556704.560303.12980HepG2AGO1
ITFG1ENSG00000129636.83932.745003116.693400.335402.602102.02710HepG2EIF2S1
ITFG1ENSG00000129636.82333.653103353.43760-0.523103.786102.98710HepG2EIF4B
ITFG1ENSG00000129636.82469.758603074.80250-0.316105.355704.25410HepG2EIF4G1
ITFG1ENSG00000129636.84321.696002945.505900.553004.389203.37800HepG2EIF4G2
ITFG1ENSG00000129636.85182.208003494.614400.5683017.3099016.01680HepG2ETF1
ITFG1ENSG00000129636.82036.884801676.366400.280902.698901.54750HepG2FAM120A
ITFG1ENSG00000129636.82391.991501946.770800.297002.597701.48460HepG2FASTKD2
ITFG1ENSG00000129636.85219.404302982.651000.8072011.084909.69270HepG2FIP1L1
ITFG1ENSG00000129636.82039.625201597.066700.352802.662101.41640HepG2FKBP4
ITFG1ENSG00000129636.83586.169002521.356900.508107.236906.00410HepG2FUBP3
ITFG1ENSG00000129636.83524.990302546.172200.469203.016701.85140HepG2FUS
ITFG1ENSG00000129636.82449.849903474.98570-0.504305.239704.30850HepG2FXR1
ITFG1ENSG00000129636.82802.000703422.18580-0.288502.108601.33760HepG2G3BP2
ITFG1ENSG00000129636.82918.896602221.789700.393603.633602.46140HepG2GNB2L1
ITFG1ENSG00000129636.82975.137702214.493600.425907.183305.70030HepG2HDGF
ITFG1ENSG00000129636.81830.090002322.38950-0.343703.390702.68430HepG2HNRNPA1
ITFG1ENSG00000129636.84591.085002444.776900.9090017.0334015.66240HepG2HNRNPLL
ITFG1ENSG00000129636.81614.344302621.22750-0.6993027.2906025.29250HepG2ILF2
ITFG1ENSG00000129636.82420.528603476.19760-0.522205.354604.44970HepG2MAGOH
ITFG1ENSG00000129636.83501.499702414.030400.536408.256106.92630HepG2MSI2
ITFG1ENSG00000129636.83410.737902493.357500.451902.579901.64840HepG2MTPAP
ITFG1ENSG00000129636.82996.709802027.054200.563908.321406.26630HepG2NAA15
ITFG1ENSG00000129636.84745.384703578.077000.407203.511402.80210HepG2NCBP2
ITFG1ENSG00000129636.83633.865703090.719800.233502.286901.59370HepG2NOL12
ITFG1ENSG00000129636.83816.476002480.790600.621303.782802.73090HepG2PABPC1
ITFG1ENSG00000129636.84769.740203186.676300.581806.704005.58820HepG2PABPC4
ITFG1ENSG00000129636.83715.478802540.053800.5486014.4880012.80830HepG2PARN
ITFG1ENSG00000129636.81910.102903216.89060-0.7520025.2184023.69820HepG2PCBP1
ITFG1ENSG00000129636.81817.531202288.79260-0.332604.345903.44320HepG2PPIL4
ITFG1ENSG00000129636.82838.687502032.607300.4818010.528809.16140HepG2PRPF4
ITFG1ENSG00000129636.81958.926901480.358800.404003.518402.61830HepG2PRPF8
ITFG1ENSG00000129636.82848.031203273.36120-0.200802.229401.72800HepG2PTBP1
ITFG1ENSG00000129636.83509.560902950.287400.250302.024101.50250HepG2PUF60
ITFG1ENSG00000129636.83696.752403129.539400.240202.286401.67450HepG2PUM2
ITFG1ENSG00000129636.82724.815002362.644300.205702.709002.09760HepG2PUS1
ITFG1ENSG00000129636.84703.017903545.014400.407706.881305.96160HepG2QKI
ITFG1ENSG00000129636.83821.644102326.488700.715904.804503.89030HepG2RAVER1
ITFG1ENSG00000129636.84291.822003488.017200.299103.691602.71700HepG2RBM15
ITFG1ENSG00000129636.83807.739102920.878900.382406.533705.81900HepG2RBM22
ITFG1ENSG00000129636.84213.056603217.372500.388904.966204.08710HepG2RBM25
ITFG1ENSG00000129636.82233.596503642.89130-0.7057022.5456021.29210HepG2NELFE
ITFG1ENSG00000129636.82429.283303392.94060-0.4820011.2036010.09080HepG2RECQL
ITFG1ENSG00000129636.81835.869402725.30950-0.570004.426803.41470HepG2RPS3A
ITFG1ENSG00000129636.82211.438301464.406500.594606.059804.94370HepG2RRP9
ITFG1ENSG00000129636.81721.787402419.84550-0.491005.590404.61540HepG2SF3B1
ITFG1ENSG00000129636.82856.774603407.89340-0.254503.699203.02980HepG2SF3B4
ITFG1ENSG00000129636.83328.179402828.684800.234503.769202.97060HepG2SLBP
ITFG1ENSG00000129636.82966.343302665.020600.154402.060201.49270HepG2SMN1
ITFG1ENSG00000129636.86451.257702692.502701.260507.921906.59600HepG2SNRNP70
ITFG1ENSG00000129636.84405.613103299.074600.4172010.384109.58130HepG2SRFBP1
ITFG1ENSG00000129636.84101.588403557.143000.205402.932502.44940HepG2SRSF1
ITFG1ENSG00000129636.83359.340602912.873400.205602.394301.80700HepG2SRSF5
ITFG1ENSG00000129636.82566.434402893.95970-0.173302.029701.54250HepG2SRSF9
ITFG1ENSG00000129636.82461.687402864.46400-0.218602.765102.25240HepG2SSB
ITFG1ENSG00000129636.83244.847102174.062900.577703.647402.25660HepG2SUB1
ITFG1ENSG00000129636.83002.871802014.086900.576109.556407.90040HepG2SUPT6H
ITFG1ENSG00000129636.82562.312601910.084500.423703.544602.79320HepG2SUPV3L1
ITFG1ENSG00000129636.83910.297903197.409900.290304.002603.34740HepG2TAF15
ITFG1ENSG00000129636.84935.023702382.904001.0502025.0500023.29270HepG2TARDBP
ITFG1ENSG00000129636.81678.017701280.308100.390202.847101.83730HepG2TFIP11
ITFG1ENSG00000129636.81899.824502493.53140-0.392305.161604.52270HepG2TIAL1
ITFG1ENSG00000129636.82871.036002515.769600.190502.247601.72890HepG2TRIM56
ITFG1ENSG00000129636.83593.120702612.671400.4596011.7921010.53260HepG2UPF1
ITFG1ENSG00000129636.81163.139401749.24910-0.588703.694602.51940HepG2UPF2
ITFG1ENSG00000129636.81293.603101880.26650-0.539504.850503.89980HepG2XRN2
ITFG1ENSG00000129636.82946.285402005.865700.5546017.2349015.80720HepG2ZC3H8
ITFG1ENSG00000129636.84966.639902873.433700.7894045.2956043.77850HepG2ZNF622
ITFG1ENSG00000129636.8909.626401584.37420-0.8006011.4306010.35710K562AQR
ITFG1ENSG00000129636.81254.404201599.78110-0.350904.087502.72540K562CPEB4
ITFG1ENSG00000129636.8991.06330761.611800.379803.275402.13250K562DDX3X
ITFG1ENSG00000129636.8961.29140733.797900.389502.354001.40880K562EIF3D
ITFG1ENSG00000129636.81396.22620942.757000.566504.162303.25350K562G3BP2
ITFG1ENSG00000129636.8629.38100979.36810-0.637907.107406.19310K562HNRNPC
ITFG1ENSG00000129636.81331.891901001.804600.410802.885901.93260K562HNRNPM
ITFG1ENSG00000129636.8810.621001003.81250-0.308402.130501.36120K562METAP2
ITFG1ENSG00000129636.82156.117801390.711700.632504.001302.49630K562PABPC1
ITFG1ENSG00000129636.8836.625701074.75330-0.361402.694201.36430K562PCBP1
ITFG1ENSG00000129636.81474.701301132.614000.380702.640501.83010K562PCBP3
ITFG1ENSG00000129636.81286.03720868.778200.565806.758805.51720K562POLR2G
ITFG1ENSG00000129636.8642.49900878.07910-0.450703.172102.19500K562PSIP1
ITFG1ENSG00000129636.81860.365601360.124000.451704.028103.39150K562PUS1
ITFG1ENSG00000129636.8815.244501024.78090-0.330002.219101.46990K562RBM22
ITFG1ENSG00000129636.8569.66370759.34340-0.414602.813901.77910K562SRFBP1
ITFG1ENSG00000129636.8757.546501068.95220-0.496805.291602.98080K562UPF2
ITFG1ENSG00000129636.81442.972201784.75760-0.306702.484901.67490K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ITFG1 is not available on ENCORE database.





5 RBPs can affect the splicing of ITFG1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEITFG1ENSG00000129636.8chr16-474842644748436447462714474628094748530647485381-0.110000.000460.06635excludedK562DROSHA
SEITFG1ENSG00000129636.8chr16-4748426447484364474627144746280947485306474853810.112000.000000.00015includedK562HNRNPC
A3SSITFG1ENSG00000129636.8chr16-4729445547294676472944554729460647345150473453230.076000.001290.04698longerK562U2AF2
A3SSITFG1ENSG00000129636.8chr16-4718958247189828471895824718968947192783471929010.060000.000350.00273longerK562AQR
A3SSITFG1ENSG00000129636.8chr16-471964504719657547196450471965124725277847252857-0.071000.000310.01498shorterHepG2U2AF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ITFG1 is not avaliable on ENCORE database.