CTDSP1

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CTDSP1	ENSG00000144579.7	7.87	24.74	16.30	ENCSR000AEF
HepG2	CTDSP1	ENSG00000144579.7	99.66	51.35	75.50	ENCSR985KAT
K562	CTDSP1	ENSG00000144579.7	43.18	30.13	36.66	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CTDSP1 is not avaliable on ENCORE database.

Proteins bound to RNA

CTDSP1 RNA is bound by 39 proteins.

eCLIP assay for CTDSP1 is not avaliable on ENCORE database.

39 proteins are bound to CTDSP1 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr2	219269416	219269540	+	3'-UTR	5.69648	56.56219	HepG2	AKAP1
chr2	219269229	219269321	+	3'-UTR	5.05671	33.98825	HepG2	UPF1
chr2	219269720	219269776	+	3'-UTR	6.13516	17.28419	HepG2	AKAP1
chr2	219269540	219269624	+	3'-UTR	4.83609	26.42742	HepG2	AKAP1
chr2	219269648	219269720	+	3'-UTR	4.99986	23.03878	HepG2	AKAP1
chr2	219270223	219270255	+	3'-UTR	4.75289	5.63383	K562	UPF1
chr2	219269805	219269873	+	3'-UTR	5.26250	29.11344	HepG2	UPF1
chr2	219269238	219269324	+	3'-UTR	3.52427	6.71645	HepG2	PTBP1
chr2	219269214	219269312	+	3'-UTR	4.45351	7.15718	HepG2	PABPN1
chr2	219269919	219269985	+	3'-UTR	3.01874	5.07860	K562	FAM120A
chr2	219270423	219270479	+	3'-UTR	3.37960	4.63930	HepG2	PABPN1
chr2	219270201	219270259	+	3'-UTR	3.57371	11.95452	HepG2	AKAP1
chr2	219270424	219270460	+	3'-UTR	3.72284	10.68761	HepG2	AKAP1
chr2	219269677	219269703	+	3'-UTR	3.50414	4.14074	K562	UPF1
chr2	219269925	219269981	+	3'-UTR	3.55232	12.13864	HepG2	AKAP1
chr2	219270028	219270088	+	3'-UTR	3.39007	5.44955	HepG2	TIAL1
chr2	219270316	219270349	+	3'-UTR	4.05464	11.21254	HepG2	UPF1
chr2	219270029	219270099	+	3'-UTR	5.20895	38.76125	HepG2	UPF1
chr2	219270332	219270357	+	3'-UTR	3.92160	10.48339	HepG2	AKAP1
chr2	219269654	219269705	+	3'-UTR	4.70785	19.38106	HepG2	UPF1
chr2	219269242	219269307	+	3'-UTR	4.67937	18.26039	HepG2	AKAP1
chr2	219269926	219269958	+	3'-UTR	3.37536	6.66729	HepG2	DDX55
chr2	219270031	219270116	+	3'-UTR	4.10834	27.93712	HepG2	AKAP1
chr2	219269468	219269536	+	3'-UTR	3.06950	8.55824	K562	UPF1
chr2	219269234	219269303	+	3'-UTR	5.14889	3.75691	HepG2	PCBP1
chr2	219270011	219270139	+	3'-UTR	4.08621	28.55281	K562	UPF1
chr2	219269911	219269998	+	3'-UTR	3.96362	12.24922	K562	UPF1
chr2	219269381	219269542	+	3'-UTR	7.29947	91.49263	HepG2	UPF1
chr2	219269846	219269906	+	3'-UTR	5.31128	20.03557	K562	PUM2
chr2	219269923	219269988	+	3'-UTR	3.85737	4.75336	K562	PUM1
chr2	219270024	219270125	+	3'-UTR	3.90983	16.79159	K562	FAM120A
chr2	219270032	219270068	+	3'-UTR	3.37610	5.30840	K562	PUM2
chr2	219269916	219269997	+	3'-UTR	6.09916	38.96217	HepG2	UPF1
chr2	219269546	219269635	+	3'-UTR	6.11867	39.21605	HepG2	UPF1
chr2	219269705	219269773	+	3'-UTR	5.12287	26.48470	HepG2	UPF1
chr2	219269906	219269995	+	3'-UTR	5.44712	25.03103	K562	PUM2
chr2	219270136	219270191	+	3'-UTR	4.62077	15.92320	HepG2	AKAP1
chr2	219269813	219269887	+	3'-UTR	6.91249	32.52068	HepG2	AKAP1
chr2	219269803	219269866	+	3'-UTR	3.19212	4.88837	HepG2	PABPN1
chr2	219264574	219264622	+	5'-UTR,intron-Distal,intron-Proximal	4.61210	3.78681	HepG2	PCBP2
chr2	219264744	219264818	+	5'-UTR,CDS,intron-Distal	3.54384	6.88189	HepG2	DDX3X
chr2	219264750	219264786	+	5'-UTR,intron-Distal	3.68506	4.69054	HepG2	CSTF2T
chr2	219264741	219264835	+	5'-UTR,CDS,intron-Distal	3.59169	3.70637	K562	DDX3X
chr2	219268991	219269039	+	CDS,intron-Proximal	3.09530	7.39618	HepG2	PRPF8
chr2	219266433	219266446	+	CDS,intron-Proximal	4.50817	20.43203	HepG2	PRPF8
chr2	219266222	219266323	+	CDS,intron-Proximal	3.20019	11.96774	HepG2	BUD13
chr2	219267071	219267082	+	CDS,intron-Proximal	4.13623	6.41974	HepG2	PPIG
chr2	219267807	219267850	+	CDS	4.85684	19.67919	HepG2	PPIG
chr2	219266892	219266932	+	CDS	3.12500	8.29941	HepG2	PPIG
chr2	219265325	219265424	+	CDS,intron-Distal	5.12193	8.33684	K562	NONO
chr2	219267715	219267824	+	CDS,intron-Proximal	4.43485	47.58213	HepG2	DROSHA
chr2	219268113	219268176	+	CDS,intron-Proximal	3.55107	15.89452	HepG2	PPIG
chr2	219266287	219266293	+	CDS	4.10633	3.83925	K562	YBX3
chr2	219267743	219267772	+	CDS,intron-Proximal	3.37080	5.31238	HepG2	SUPV3L1
chr2	219265583	219265626	+	CDS,intron-Distal,intron-Proximal	4.28367	4.72743	K562	NONO
chr2	219264838	219264884	+	CDS,intron-Distal,intron-Proximal	3.29197	9.21862	HepG2	PPIG
chr2	219266808	219266888	+	CDS,intron-Proximal	4.04312	25.92205	HepG2	AQR
chr2	219266434	219266480	+	CDS,intron-Proximal	3.23028	9.21862	HepG2	PPIG
chr2	219268124	219268146	+	CDS,intron-Proximal	5.19850	17.52751	HepG2	AQR
chr2	219267092	219267150	+	CDS,intron-Proximal	3.01462	10.27601	HepG2	BUD13
chr2	219264852	219264931	+	CDS,intron-Distal,intron-Proximal	3.00081	16.40089	HepG2	PRPF8
chr2	219267832	219267843	+	CDS	3.65354	5.19978	HepG2	BUD13
chr2	219267946	219267971	+	CDS,intron-Proximal	3.04648	7.41653	HepG2	BUD13
chr2	219265578	219265621	+	CDS,intron-Distal,intron-Proximal	3.82795	8.11515	HepG2	PRPF4
chr2	219267824	219267849	+	CDS	3.69193	10.92968	HepG2	DROSHA
chr2	219266838	219266856	+	CDS	3.17110	5.08732	HepG2	PPIG
chr2	219268992	219269040	+	CDS,intron-Proximal	3.74872	7.38298	HepG2	AQR
chr2	219268121	219268181	+	CDS,intron-Proximal	5.54076	33.08511	HepG2	PRPF8
chr2	219267756	219267807	+	CDS,intron-Proximal	4.10919	18.53760	HepG2	PPIG
chr2	219266317	219266337	+	CDS	3.60392	5.73766	K562	YBX3
chr2	219264835	219264874	+	CDS,intron-Distal	3.64169	3.95400	K562	UPF1
chr2	219267841	219267889	+	CDS,intron-Proximal	5.89122	12.84241	HepG2	PRPF8
chr2	219266856	219266886	+	CDS	3.35684	6.82013	HepG2	PPIG
chr2	219266342	219266401	+	CDS	3.78828	16.47848	HepG2	PPIG
chr2	219266880	219266941	+	CDS,intron-Proximal	3.08686	6.07775	HepG2	GRWD1
chr2	219266433	219266452	+	CDS,intron-Proximal	6.10459	12.87452	K562	AQR
chr2	219265047	219265081	+	CDS,intron-Distal	3.56990	6.09076	HepG2	NKRF
chr2	219266242	219266298	+	CDS,intron-Proximal	4.75582	22.69071	HepG2	SF3A3
chr2	219267954	219267983	+	CDS,intron-Proximal	4.70894	14.82150	HepG2	PPIG
chr2	219267796	219267851	+	CDS,intron-Proximal	4.18679	5.24460	HepG2	UCHL5
chr2	219266293	219266317	+	CDS	3.57186	5.32768	K562	YBX3
chr2	219267084	219267133	+	CDS,intron-Proximal	3.38348	8.80815	HepG2	PRPF4
chr2	219267754	219267768	+	CDS,intron-Proximal	3.59616	6.55814	HepG2	PRPF8
chr2	219267119	219267145	+	CDS,intron-Proximal	4.21488	13.82212	HepG2	DGCR8
chr2	219266905	219266966	+	CDS,intron-Proximal	4.03368	19.20116	HepG2	PRPF8
chr2	219265577	219265618	+	CDS,intron-Distal	4.29409	6.25837	HepG2	DGCR8
chr2	219267082	219267134	+	CDS,intron-Proximal	4.45316	24.52613	HepG2	PPIG
chr2	219266434	219266461	+	CDS,intron-Proximal	5.70972	25.28613	HepG2	AQR
chr2	219267818	219267896	+	CDS,intron-Proximal	3.57499	7.25157	HepG2	AQR
chr2	219266340	219266422	+	CDS	3.13221	16.35139	HepG2	DDX3X
chr2	219267089	219267148	+	CDS,intron-Proximal	3.95892	14.85877	HepG2	DROSHA
chr2	219264883	219265001	+	intron-Distal,intron-Proximal	3.24870	4.40213	K562	EWSR1
chr2	219265966	219266050	+	intron-Distal,intron-Proximal	3.05764	3.84340	HepG2	NCBP2
chr2	219265966	219266043	+	intron-Distal,intron-Proximal	3.43283	13.37263	HepG2	PRPF4
chr2	219265878	219265933	+	intron-Distal,intron-Proximal	3.44325	17.63786	HepG2	BUD13
chr2	219268221	219268328	+	intron-Distal,intron-Proximal	3.12175	5.12480	HepG2	HNRNPK
chr2	219264909	219264989	+	intron-Distal,intron-Proximal	3.64287	10.86417	HepG2	CSTF2T
chr2	219267428	219267436	+	intron-Distal	11.47059	400.00000	HepG2	DGCR8
chr2	219267437	219267440	+	intron-Distal	6.78823	31.03638	HepG2	DGCR8
chr2	219263954	219264005	+	intron-Distal,intron-Proximal	4.45067	3.76634	HepG2	FKBP4
chr2	219265852	219265884	+	intron-Distal,intron-Proximal	3.86071	18.51110	HepG2	PRPF4
chr2	219265943	219265985	+	intron-Distal,intron-Proximal	3.65908	4.45974	HepG2	GTF2F1
chr2	219267589	219267640	+	intron-Distal,intron-Proximal	5.17690	8.52024	K562	GEMIN5
chr2	219265722	219265783	+	intron-Distal,intron-Proximal	4.15950	3.80512	K562	CSTF2T
chr2	219267380	219267390	+	intron-Distal	6.53885	13.26173	K562	DGCR8
chr2	219265884	219265899	+	intron-Distal,intron-Proximal	4.41894	34.95276	HepG2	PRPF4
chr2	219267400	219267430	+	intron-Distal	4.90786	7.76161	HepG2	DROSHA
chr2	219265949	219266041	+	intron-Distal,intron-Proximal	3.72258	4.48585	K562	NONO
chr2	219267444	219267510	+	intron-Distal	7.05307	29.22895	HepG2	DROSHA
chr2	219265327	219265364	+	intron-Distal	3.78293	4.72700	HepG2	GTF2F1
chr2	219265714	219265799	+	intron-Distal,intron-Proximal	3.81684	12.35493	HepG2	GTF2F1
chr2	219264940	219264980	+	intron-Distal,intron-Proximal	3.99486	6.96368	HepG2	DGCR8
chr2	219264927	219264990	+	intron-Distal,intron-Proximal	4.36963	16.17290	HepG2	PRPF4
chr2	219264905	219265003	+	intron-Distal,intron-Proximal	3.06249	6.00752	K562	GEMIN5
chr2	219267526	219267565	+	intron-Distal	4.77028	10.31263	K562	DROSHA
chr2	219263802	219263851	+	intron-Distal	3.72008	4.04314	K562	DGCR8
chr2	219267653	219267727	+	intron-Distal,intron-Proximal	5.55241	23.91305	K562	DROSHA
chr2	219267655	219267714	+	intron-Distal,intron-Proximal	6.51131	33.22240	HepG2	DGCR8
chr2	219264905	219265004	+	intron-Distal,intron-Proximal	3.36561	16.57456	HepG2	BUD13
chr2	219265715	219265769	+	intron-Distal,intron-Proximal	5.11464	7.04966	HepG2	CDC40
chr2	219265957	219265991	+	intron-Distal,intron-Proximal	3.96151	11.51049	HepG2	DROSHA
chr2	219265991	219266041	+	intron-Distal,intron-Proximal	4.45270	15.95611	HepG2	DROSHA
chr2	219265718	219265763	+	intron-Distal,intron-Proximal	3.35503	4.34865	K562	NONO
chr2	219265320	219265372	+	intron-Distal	3.45165	6.10085	HepG2	DGCR8
chr2	219267570	219267656	+	intron-Distal,intron-Proximal	7.23565	125.76747	HepG2	DROSHA
chr2	219264894	219264927	+	intron-Distal,intron-Proximal	5.30035	9.69835	HepG2	PRPF4
chr2	219267390	219267401	+	intron-Distal	6.75527	15.95649	K562	DGCR8
chr2	219265722	219265777	+	intron-Distal,intron-Proximal	4.24051	18.96739	HepG2	DROSHA
chr2	219264931	219264996	+	intron-Distal,intron-Proximal	4.07805	5.95949	HepG2	CDC40
chr2	219267321	219267366	+	intron-Distal	4.88058	7.58609	HepG2	PRPF4
chr2	219267494	219267572	+	intron-Distal	7.09961	59.01202	HepG2	DGCR8
chr2	219267377	219267401	+	intron-Distal	7.40892	153.53384	HepG2	DGCR8
chr2	219265731	219265764	+	intron-Distal,intron-Proximal	3.47048	10.96605	HepG2	BUD13
chr2	219265862	219265943	+	intron-Distal,intron-Proximal	3.35913	11.21343	HepG2	GTF2F1
chr2	219265765	219265815	+	intron-Distal,intron-Proximal	4.57715	19.70772	HepG2	EFTUD2
chr2	219264093	219264150	+	intron-Distal,intron-Proximal	3.45564	3.77567	K562	NONO
chr2	219267401	219267439	+	intron-Distal	10.03172	178.21843	K562	DGCR8
chr2	219264908	219264990	+	intron-Distal,intron-Proximal	4.24434	4.22598	K562	CSTF2T
chr2	219265987	219266048	+	intron-Distal,intron-Proximal	3.13192	10.09245	HepG2	CSTF2T
chr2	219267581	219267643	+	intron-Distal,intron-Proximal	3.40332	10.96605	HepG2	BUD13
chr2	219267579	219267653	+	intron-Distal,intron-Proximal	5.34256	44.79778	K562	DROSHA
chr2	219265335	219265381	+	intron-Distal	3.09622	12.85279	HepG2	EFTUD2
chr2	219265899	219265950	+	intron-Distal,intron-Proximal	4.31885	37.19880	HepG2	PRPF4
chr2	219267510	219267570	+	intron-Distal	6.33217	45.17061	HepG2	DROSHA
chr2	219264911	219264975	+	intron-Distal,intron-Proximal	3.79060	6.10298	HepG2	GTF2F1
chr2	219265331	219265358	+	intron-Distal	4.72007	6.11596	HepG2	PRPF4
chr2	219265859	219265943	+	intron-Distal,intron-Proximal	3.20689	13.45529	HepG2	CSTF2T
chr2	219263666	219263731	+	intron-Distal	4.27072	7.40594	K562	DGCR8
chr2	219264906	219264973	+	intron-Distal,intron-Proximal	4.57638	4.65580	K562	GTF2F1
chr2	219267320	219267367	+	intron-Distal	3.96175	16.36500	HepG2	EFTUD2
chr2	219265725	219265761	+	intron-Distal,intron-Proximal	3.58189	6.40850	HepG2	FASTKD2
chr2	219265763	219265800	+	intron-Distal,intron-Proximal	4.19314	9.37150	HepG2	PRPF4
chr2	219265870	219265965	+	intron-Distal,intron-Proximal	3.64264	3.78855	HepG2	RBM5
chr2	219264957	219265009	+	intron-Distal,intron-Proximal	4.24677	3.99137	K562	NONO
chr2	219265713	219265783	+	intron-Distal,intron-Proximal	3.98203	7.71366	K562	DROSHA
chr2	219267292	219267379	+	intron-Distal	8.06182	86.06236	HepG2	DROSHA
chr2	219267333	219267375	+	intron-Distal	3.17691	3.20886	K562	PRPF8
chr2	219265863	219265945	+	intron-Distal,intron-Proximal	3.70711	6.87283	HepG2	PCBP2
chr2	219266001	219266043	+	intron-Distal,intron-Proximal	3.35551	12.36537	HepG2	BUD13
chr2	219265714	219265779	+	intron-Distal,intron-Proximal	4.29275	9.78791	K562	GTF2F1
chr2	219267446	219267493	+	intron-Distal	6.74154	13.47900	K562	DROSHA
chr2	219267573	219267650	+	intron-Distal,intron-Proximal	6.04261	56.24841	HepG2	DGCR8
chr2	219265897	219265925	+	intron-Distal,intron-Proximal	5.41908	11.85054	HepG2	DROSHA
chr2	219265731	219265802	+	intron-Distal,intron-Proximal	5.36571	8.12542	HepG2	FKBP4
chr2	219265715	219265779	+	intron-Distal,intron-Proximal	4.24323	18.22066	HepG2	NKRF
chr2	219263805	219263848	+	intron-Distal	3.07956	3.14365	K562	NONO
chr2	219265899	219265918	+	intron-Distal,intron-Proximal	5.83371	4.38825	K562	DROSHA
chr2	219267569	219267660	+	intron-Distal,intron-Proximal	4.14004	4.07948	K562	RBFOX2
chr2	219265999	219266049	+	intron-Distal,intron-Proximal	3.24848	3.20369	HepG2	FKBP4
chr2	219264930	219264975	+	intron-Distal,intron-Proximal	3.51222	3.39008	HepG2	AQR
chr2	219266529	219266587	+	intron-Distal,intron-Proximal	4.30008	13.98595	HepG2	DROSHA
chr2	219267594	219267627	+	intron-Distal	5.90258	12.11094	K562	DGCR8
chr2	219267221	219267286	+	intron-Distal,intron-Proximal	6.03026	36.56038	HepG2	DROSHA
chr2	219265876	219265950	+	intron-Distal,intron-Proximal	3.18539	16.00284	HepG2	EFTUD2
chr2	219265721	219265787	+	intron-Distal,intron-Proximal	3.15045	7.68309	HepG2	FAM120A
chr2	219265975	219266040	+	intron-Distal,intron-Proximal	4.76958	4.93122	K562	SLTM
chr2	219266001	219266044	+	intron-Distal,intron-Proximal	3.96840	17.33399	HepG2	EFTUD2
chr2	219267309	219267377	+	intron-Distal	6.03476	60.64128	HepG2	DGCR8
chr2	219265715	219265793	+	intron-Distal,intron-Proximal	3.94542	12.05819	HepG2	CSTF2T
chr2	219265886	219265969	+	intron-Distal,intron-Proximal	4.13480	9.74456	K562	GTF2F1
chr2	219264932	219265017	+	intron-Distal,intron-Proximal	4.13285	10.27754	K562	DROSHA
chr2	219267231	219267265	+	intron-Distal	6.92914	25.84590	HepG2	DGCR8
chr2	219267407	219267424	+	intron-Distal	11.69757	400.00000	HepG2	DGCR8
chr2	219267334	219267379	+	intron-Distal	4.68652	11.40307	K562	DGCR8
chr2	219264893	219265017	+	intron-Distal,intron-Proximal	5.53998	77.71061	HepG2	EFTUD2
chr2	219264007	219264051	+	intron-Distal,intron-Proximal	3.68652	4.04314	K562	DGCR8
chr2	219267424	219267428	+	intron-Distal	11.52201	400.00000	HepG2	DGCR8
chr2	219264907	219264982	+	intron-Distal,intron-Proximal	4.26024	6.76676	HepG2	SLTM
chr2	219268947	219269018	+	intron-Proximal	3.26062	3.64168	HepG2	RBM5
chr2	219266250	219266274	+	intron-Proximal	3.18248	5.82155	HepG2	PRPF4
chr2	219267665	219267722	+	intron-Proximal	5.77322	6.24391	K562	GEMIN5
chr2	219266461	219266473	+	intron-Proximal	6.54861	23.21167	HepG2	AQR
chr2	219267145	219267208	+	intron-Proximal	5.66728	44.29027	HepG2	DGCR8
chr2	219266452	219266482	+	intron-Proximal	6.57774	18.17544	K562	AQR
chr2	219266446	219266483	+	intron-Proximal	4.72535	25.14560	HepG2	PRPF8
chr2	219267136	219267195	+	intron-Proximal	3.67861	24.43619	HepG2	EFTUD2
chr2	219266482	219266519	+	intron-Proximal	5.62237	9.23760	K562	AQR
chr2	219268146	219268180	+	intron-Proximal	6.21769	17.97231	HepG2	AQR
chr2	219267134	219267153	+	intron-Proximal	3.04729	8.29694	HepG2	PPIG
chr2	219266483	219266532	+	intron-Proximal	4.99651	7.08947	HepG2	PRPF8
chr2	219267150	219267198	+	intron-Proximal	4.73156	18.15647	HepG2	BUD13
chr2	219266238	219266273	+	intron-Proximal	5.43309	7.81134	HepG2	AQR
chr2	219266435	219266445	+	intron-Proximal	5.40025	6.28153	HepG2	SUPV3L1
chr2	219266445	219266476	+	intron-Proximal	4.04501	5.65130	HepG2	SUPV3L1
chr2	219267662	219267715	+	intron-Proximal	5.88940	68.63482	HepG2	DROSHA
chr2	219268929	219268992	+	intron-Proximal	5.42521	6.74224	HepG2	AQR
chr2	219267148	219267221	+	intron-Proximal	4.56876	32.14905	HepG2	DROSHA
chr2	219266479	219266527	+	intron-Proximal	6.94281	14.81270	HepG2	EFTUD2
chr2	219266753	219266808	+	intron-Proximal	4.51689	13.30024	HepG2	AQR
chr2	219266999	219267071	+	intron-Proximal	5.64776	21.55364	HepG2	EFTUD2
chr2	219266497	219266529	+	intron-Proximal	5.57354	13.97017	HepG2	DROSHA
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for CTDSP1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CTDSP1 is not available on ENCORE database.
130 RBPs can affect the levels of CTDSP1.

The Knockdown/knockout RNA-Seq assay for CTDSP1 is not available on ENCORE database.

130 RBPs can affect the gene expression of CTDSP1 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CTDSP1	ENSG00000144579.3	1166.60160	1862.51190	-0.67490	3.40990	2.22780	HepG2	AATF
CTDSP1	ENSG00000144579.3	2022.35140	3429.34910	-0.76190	18.14340	16.87820	HepG2	ACO1
CTDSP1	ENSG00000144579.3	2504.36210	4433.76620	-0.82410	3.35670	2.77880	HepG2	AKAP1
CTDSP1	ENSG00000144579.3	2746.43280	3533.62270	-0.36360	6.77330	5.77310	HepG2	AUH
CTDSP1	ENSG00000144579.3	2659.75910	1785.95450	0.57450	4.96870	3.79490	HepG2	BCLAF1
CTDSP1	ENSG00000144579.3	1384.52610	1027.76830	0.42980	1.94030	1.43180	HepG2	BOP1
CTDSP1	ENSG00000144579.3	1355.63430	1891.26740	-0.48040	2.66410	1.90690	HepG2	CALR
CTDSP1	ENSG00000144579.3	2389.84150	3428.11830	-0.52050	11.70530	10.52950	HepG2	CKAP4
CTDSP1	ENSG00000144579.3	1557.15820	943.48900	0.72270	2.38700	1.74180	HepG2	CPSF6
CTDSP1	ENSG00000144579.3	2077.48350	1710.05530	0.28070	3.17290	2.08170	HepG2	YBX3
CTDSP1	ENSG00000144579.3	2287.02850	2901.92360	-0.34350	5.04650	4.22620	HepG2	CELF1
CTDSP1	ENSG00000144579.3	4365.68870	3120.23850	0.48450	16.19790	14.66250	HepG2	DAZAP1
CTDSP1	ENSG00000144579.3	2311.75770	3171.43340	-0.45610	7.10560	5.87280	HepG2	DDX19B
CTDSP1	ENSG00000144579.3	2240.73510	1712.39940	0.38790	5.51130	3.93040	HepG2	DDX1
CTDSP1	ENSG00000144579.3	1455.88510	2010.48540	-0.46560	2.23310	1.42280	HepG2	DDX24
CTDSP1	ENSG00000144579.3	2729.61390	1619.49820	0.75310	5.51230	4.15610	HepG2	DHX30
CTDSP1	ENSG00000144579.3	2698.37560	3280.83230	-0.28200	3.36700	2.63000	HepG2	DKC1
CTDSP1	ENSG00000144579.3	3250.10050	1679.08680	0.95270	5.61260	4.64100	HepG2	DNAJC21
CTDSP1	ENSG00000144579.3	2730.71030	1664.34630	0.71420	19.63120	18.04380	HepG2	DNAJC2
CTDSP1	ENSG00000144579.3	2004.27580	2500.97880	-0.31940	2.54320	1.65630	HepG2	EEF2
CTDSP1	ENSG00000144579.3	1465.72230	2084.58590	-0.50810	5.35580	3.80920	HepG2	EFTUD2
CTDSP1	ENSG00000144579.3	4882.66570	3506.61450	0.47750	2.70700	2.12100	HepG2	EIF2S1
CTDSP1	ENSG00000144579.3	2038.66480	2641.42400	-0.37370	3.44050	2.13270	HepG2	EIF2S2
CTDSP1	ENSG00000144579.3	4681.50910	2948.84900	0.66670	7.20920	5.92080	HepG2	EIF4G2
CTDSP1	ENSG00000144579.3	4641.54970	4057.16150	0.19400	1.82850	1.31890	HepG2	ETF1
CTDSP1	ENSG00000144579.3	1403.55890	1814.75970	-0.37070	3.98850	2.55890	HepG2	FAM120A
CTDSP1	ENSG00000144579.3	2557.34640	3516.96860	-0.45970	2.87180	2.08710	HepG2	FIP1L1
CTDSP1	ENSG00000144579.3	1241.30510	1682.26930	-0.43860	3.06400	1.73100	HepG2	FKBP4
CTDSP1	ENSG00000144579.3	1238.62070	2304.50620	-0.89570	3.01160	1.84810	HepG2	FUS
CTDSP1	ENSG00000144579.3	2734.32910	3273.75220	-0.25980	3.06060	2.03840	HepG2	HDGF
CTDSP1	ENSG00000144579.3	2496.34670	1695.17390	0.55830	7.90640	6.89790	HepG2	HNRNPA1
CTDSP1	ENSG00000144579.3	2762.04850	1885.59620	0.55060	4.43300	3.57010	HepG2	HNRNPC
CTDSP1	ENSG00000144579.3	2706.35980	1934.36290	0.48440	9.64790	8.40920	HepG2	HNRNPF
CTDSP1	ENSG00000144579.3	3162.57430	2842.28580	0.15390	2.00580	1.42000	HepG2	HNRNPL
CTDSP1	ENSG00000144579.3	1766.35620	1020.52310	0.79140	4.24460	3.47960	HepG2	HNRNPLL
CTDSP1	ENSG00000144579.3	2687.63880	1873.12760	0.52080	10.51360	9.39440	HepG2	HNRNPU
CTDSP1	ENSG00000144579.3	3161.99140	1904.77770	0.73110	14.97710	13.43580	HepG2	IGF2BP1
CTDSP1	ENSG00000144579.3	1775.53900	3461.73970	-0.96320	2.86450	1.86570	HepG2	IGF2BP3
CTDSP1	ENSG00000144579.3	2638.50850	1913.33300	0.46350	13.16090	11.69370	HepG2	ILF2
CTDSP1	ENSG00000144579.3	3771.54740	3134.55310	0.26680	3.03820	1.97300	HepG2	KIF1C
CTDSP1	ENSG00000144579.3	2067.96110	2678.33380	-0.37310	2.24580	1.50500	HepG2	LARP4
CTDSP1	ENSG00000144579.3	1825.74950	3934.60080	-1.10770	5.02210	4.19430	HepG2	MATR3
CTDSP1	ENSG00000144579.3	1444.12330	2124.45180	-0.55690	3.73560	2.51930	HepG2	METAP2
CTDSP1	ENSG00000144579.3	2289.75720	2845.30870	-0.31340	2.69170	1.89330	HepG2	MSI2
CTDSP1	ENSG00000144579.3	1671.82880	1198.49820	0.48010	2.28860	1.49590	HepG2	PABPC1
CTDSP1	ENSG00000144579.3	1561.83100	1854.03980	-0.24740	2.76110	1.91390	HepG2	PARN
CTDSP1	ENSG00000144579.3	2277.36200	3653.59540	-0.68200	22.64760	21.18840	HepG2	PCBP1
CTDSP1	ENSG00000144579.3	2766.14790	1670.67520	0.72730	11.91820	10.45100	HepG2	PPIL4
CTDSP1	ENSG00000144579.3	710.34240	1558.49570	-1.13360	12.44590	10.90430	HepG2	PRPF8
CTDSP1	ENSG00000144579.3	2587.63000	3717.58110	-0.52270	13.82860	12.78950	HepG2	PTBP1
CTDSP1	ENSG00000144579.3	2730.01920	3135.31430	-0.19970	3.00480	2.39260	HepG2	PUM1
CTDSP1	ENSG00000144579.3	1869.16550	3133.01580	-0.74520	17.00630	15.43320	HepG2	PUM2
CTDSP1	ENSG00000144579.3	2442.74180	4026.42150	-0.72100	17.25030	15.88260	HepG2	QKI
CTDSP1	ENSG00000144579.3	1297.89980	2103.88110	-0.69690	2.00990	1.39940	HepG2	RAVER1
CTDSP1	ENSG00000144579.3	1094.63020	3391.01750	-1.63130	84.42280	82.34830	HepG2	RBM22
CTDSP1	ENSG00000144579.3	2982.27790	3654.16470	-0.29310	2.28460	1.66640	HepG2	RBM25
CTDSP1	ENSG00000144579.3	2814.38200	2050.18090	0.45700	3.51250	2.31820	HepG2	RCC2
CTDSP1	ENSG00000144579.3	1316.12930	4137.38470	-1.65240	111.15270	109.04860	HepG2	NELFE
CTDSP1	ENSG00000144579.3	2589.17800	3853.27760	-0.57360	16.82680	15.51790	HepG2	RECQL
CTDSP1	ENSG00000144579.3	3116.04420	2068.53680	0.59100	3.28500	2.25670	HepG2	RPS10
CTDSP1	ENSG00000144579.3	941.36130	1975.51890	-1.06940	19.01830	17.62050	HepG2	RPS19
CTDSP1	ENSG00000144579.3	1753.55170	2328.35780	-0.40900	4.11960	3.15150	HepG2	RPS2
CTDSP1	ENSG00000144579.3	1745.95080	1316.94170	0.40670	2.37560	1.63110	HepG2	RPS3A
CTDSP1	ENSG00000144579.3	1773.23840	2376.84880	-0.42270	3.78930	2.52150	HepG2	RPS5
CTDSP1	ENSG00000144579.3	548.24780	1541.59720	-1.49150	16.78260	15.14310	HepG2	RRP9
CTDSP1	ENSG00000144579.3	2392.98510	1668.08610	0.52050	13.30310	12.04860	HepG2	SAFB2
CTDSP1	ENSG00000144579.3	1480.55340	1982.39860	-0.42110	4.00140	2.87160	HepG2	SERBP1
CTDSP1	ENSG00000144579.3	2143.62530	3777.27080	-0.81730	8.32700	7.10750	HepG2	SF3A3
CTDSP1	ENSG00000144579.3	1720.39640	1010.02410	0.76830	5.77290	4.78500	HepG2	SF3B1
CTDSP1	ENSG00000144579.3	2657.05230	3870.64110	-0.54270	14.98780	13.77580	HepG2	SF3B4
CTDSP1	ENSG00000144579.3	3780.25520	2832.00090	0.41660	11.76340	10.48740	HepG2	SLBP
CTDSP1	ENSG00000144579.3	1865.40260	3829.99640	-1.03790	54.61820	53.13090	HepG2	SRFBP1
CTDSP1	ENSG00000144579.3	2034.30440	4040.04630	-0.98980	49.17270	47.72010	HepG2	SRSF1
CTDSP1	ENSG00000144579.3	2374.12090	2916.19520	-0.29670	2.84350	2.20920	HepG2	SRSF5
CTDSP1	ENSG00000144579.3	2614.35240	1900.50810	0.46000	8.77740	7.65580	HepG2	SRSF7
CTDSP1	ENSG00000144579.3	2102.07940	3286.73680	-0.64480	21.07550	19.81400	HepG2	SRSF9
CTDSP1	ENSG00000144579.3	3919.21270	3325.28590	0.23700	3.56520	2.99950	HepG2	SSB
CTDSP1	ENSG00000144579.3	2903.88070	3316.50360	-0.19170	2.66690	2.05370	HepG2	SUCLG1
CTDSP1	ENSG00000144579.3	829.21190	3631.17070	-2.13060	135.21680	131.98650	HepG2	TAF15
CTDSP1	ENSG00000144579.3	963.38480	1348.40990	-0.48510	3.43440	2.33490	HepG2	TFIP11
CTDSP1	ENSG00000144579.3	2120.53950	1819.98590	0.22040	1.91290	1.48000	HepG2	TIAL1
CTDSP1	ENSG00000144579.3	1160.53740	1612.95460	-0.47490	2.94830	1.33090	HepG2	TROVE2
CTDSP1	ENSG00000144579.3	1792.07190	3007.91400	-0.74710	7.53940	6.50820	HepG2	U2AF1
CTDSP1	ENSG00000144579.3	857.80740	1188.37300	-0.47030	3.39590	2.55930	HepG2	UCHL5
CTDSP1	ENSG00000144579.3	4294.97860	3349.87090	0.35840	6.81030	5.79370	HepG2	UPF1
CTDSP1	ENSG00000144579.3	2988.57180	3443.12930	-0.20430	2.36800	1.38780	HepG2	UTP18
CTDSP1	ENSG00000144579.3	2777.94170	3234.15460	-0.21940	2.99170	2.37370	HepG2	UTP3
CTDSP1	ENSG00000144579.3	2109.24090	1179.60790	0.83830	8.19010	6.31350	HepG2	XPO5
CTDSP1	ENSG00000144579.3	2526.61900	1980.56580	0.35120	2.00220	1.37750	HepG2	XRN2
CTDSP1	ENSG00000144579.3	1520.57550	2114.04340	-0.47540	10.93220	9.74650	HepG2	ZC3H8
CTDSP1	ENSG00000144579.3	480.24490	833.19310	-0.79490	12.86860	11.74270	K562	AGGF1
CTDSP1	ENSG00000144579.3	670.97310	915.46000	-0.44820	2.58410	1.64050	K562	AKAP8
CTDSP1	ENSG00000144579.3	387.10210	866.95230	-1.16320	17.11900	15.23280	K562	AKAP8L
CTDSP1	ENSG00000144579.3	1708.64510	1322.49480	0.36950	3.96380	2.43650	K562	APOBEC3C
CTDSP1	ENSG00000144579.3	748.19280	1195.42870	-0.67600	4.13260	3.44360	K562	AQR
CTDSP1	ENSG00000144579.3	657.59140	909.59820	-0.46800	5.41470	4.08570	K562	ATP5C1
CTDSP1	ENSG00000144579.3	1022.26640	823.71760	0.31140	2.71450	1.41870	K562	BCCIP
CTDSP1	ENSG00000144579.3	785.54530	1044.95250	-0.41170	3.92470	2.11240	K562	CEBPZ
CTDSP1	ENSG00000144579.3	629.66610	486.72860	0.37140	2.50260	1.75510	K562	CPSF6
CTDSP1	ENSG00000144579.3	671.39440	933.04670	-0.47480	5.79130	4.46530	K562	DKC1
CTDSP1	ENSG00000144579.3	520.66040	682.43640	-0.39040	2.10780	1.31020	K562	EFTUD2
CTDSP1	ENSG00000144579.3	777.14470	496.33010	0.64680	7.66800	5.61870	K562	EIF2S1
CTDSP1	ENSG00000144579.3	1802.70590	1264.28010	0.51170	8.63890	7.47410	K562	EIF2S2
CTDSP1	ENSG00000144579.3	617.71310	378.42610	0.70680	7.14400	5.87800	K562	EIF3G
CTDSP1	ENSG00000144579.3	690.73690	472.14670	0.54880	2.91830	2.07570	K562	EIF4A3
CTDSP1	ENSG00000144579.3	611.86600	425.15440	0.52510	2.99410	1.77820	K562	EIF4B
CTDSP1	ENSG00000144579.3	2087.01100	1498.71970	0.47760	8.68910	7.05180	K562	EIF4G2
CTDSP1	ENSG00000144579.3	1273.34560	786.50730	0.69500	8.87000	7.25610	K562	FIP1L1
CTDSP1	ENSG00000144579.3	374.93500	587.56840	-0.64810	3.54190	2.24540	K562	FKBP4
CTDSP1	ENSG00000144579.3	676.82010	495.30620	0.45040	3.09660	2.18630	K562	FMR1
CTDSP1	ENSG00000144579.3	937.28180	491.00560	0.93260	16.81420	15.43350	K562	FXR1
CTDSP1	ENSG00000144579.3	63.90890	163.30100	-1.35340	4.33480	3.40650	K562	G3BP2
CTDSP1	ENSG00000144579.3	698.18570	977.14230	-0.48500	3.50540	2.29000	K562	HNRNPA1
CTDSP1	ENSG00000144579.3	247.64760	577.74500	-1.22210	6.96860	4.71620	K562	HNRNPA2B1
CTDSP1	ENSG00000144579.3	1160.40760	676.57450	0.77820	11.02160	9.89540	K562	HNRNPC
CTDSP1	ENSG00000144579.3	826.52850	604.23290	0.45190	3.78660	2.42990	K562	HNRNPF
CTDSP1	ENSG00000144579.3	1468.47970	1066.22230	0.46170	4.15610	3.18730	K562	HSPD1
CTDSP1	ENSG00000144579.3	448.48500	920.13350	-1.03680	8.94330	7.23770	K562	KIF1C
CTDSP1	ENSG00000144579.3	933.32580	686.30890	0.44340	3.04260	1.50450	K562	LIN28B
CTDSP1	ENSG00000144579.3	584.41900	423.57420	0.46430	3.48250	2.53470	K562	MAGOH
CTDSP1	ENSG00000144579.3	571.83800	880.72890	-0.62310	3.32560	2.11580	K562	MAK16
CTDSP1	ENSG00000144579.3	695.97930	422.66200	0.71940	6.96850	5.41750	K562	MATR3
CTDSP1	ENSG00000144579.3	712.51130	1030.77070	-0.53270	2.46190	1.61260	K562	MBNL1
CTDSP1	ENSG00000144579.3	616.92960	453.58860	0.44360	3.03100	2.11250	K562	METAP2
CTDSP1	ENSG00000144579.3	265.23460	722.48850	-1.44570	11.03120	8.81410	K562	NAA15
CTDSP1	ENSG00000144579.3	879.58790	1068.71270	-0.28100	3.24380	2.44050	K562	NSUN2
CTDSP1	ENSG00000144579.3	1178.78450	681.40390	0.79060	5.32040	3.58970	K562	PABPC1
CTDSP1	ENSG00000144579.3	256.90020	505.48290	-0.97650	4.54800	3.19110	K562	PABPN1
CTDSP1	ENSG00000144579.3	213.25100	376.81260	-0.82130	4.08930	2.89390	K562	PCBP2
CTDSP1	ENSG00000144579.3	786.69960	1236.42180	-0.65230	6.26490	5.00890	K562	PCBP3
CTDSP1	ENSG00000144579.3	685.49630	948.37360	-0.46830	4.74630	3.69740	K562	POLR2G
CTDSP1	ENSG00000144579.3	1151.29970	892.95920	0.36650	2.79920	1.97190	K562	PPIG
CTDSP1	ENSG00000144579.3	502.36350	664.09490	-0.40270	2.57060	1.84700	K562	PRPF8
CTDSP1	ENSG00000144579.3	737.52420	411.55490	0.84150	3.72290	2.96350	K562	PTBP1
CTDSP1	ENSG00000144579.3	2044.60280	1704.23940	0.26260	3.30650	2.25630	K562	PUM2
CTDSP1	ENSG00000144579.3	270.80110	859.94300	-1.66700	29.83940	28.03230	K562	PUS1
CTDSP1	ENSG00000144579.3	276.63090	182.66660	0.59860	3.50190	1.46020	K562	QKI
CTDSP1	ENSG00000144579.3	313.70720	837.74880	-1.41710	19.97090	18.33890	K562	RBM15
CTDSP1	ENSG00000144579.3	659.60890	384.65110	0.77800	7.51250	5.00360	K562	RBM34
CTDSP1	ENSG00000144579.3	494.86990	219.34730	1.17370	6.23260	4.65280	K562	RPS3
CTDSP1	ENSG00000144579.3	202.59770	462.34590	-1.19040	5.35670	3.50920	K562	SF1
CTDSP1	ENSG00000144579.3	905.91140	563.75170	0.68420	2.88130	1.54030	K562	SFPQ
CTDSP1	ENSG00000144579.3	182.22710	530.86890	-1.54260	9.52420	6.81130	K562	SNRNP200
CTDSP1	ENSG00000144579.3	807.29110	524.73720	0.62140	5.40430	3.82870	K562	SRFBP1
CTDSP1	ENSG00000144579.3	580.58760	403.50000	0.52480	4.06650	3.21600	K562	SRSF1
CTDSP1	ENSG00000144579.3	360.56630	211.68660	0.76820	3.37810	2.19970	K562	SRSF4
CTDSP1	ENSG00000144579.3	734.38560	1071.80540	-0.54540	7.71620	5.76960	K562	SRSF7
CTDSP1	ENSG00000144579.3	781.31190	1079.47350	-0.46640	5.17290	3.03260	K562	SRSF9
CTDSP1	ENSG00000144579.3	72.73570	160.29360	-1.14000	4.33450	2.35430	K562	TAF15
CTDSP1	ENSG00000144579.3	1028.23270	408.28420	1.33240	12.41920	10.72960	K562	TARDBP
CTDSP1	ENSG00000144579.3	798.11820	393.85830	1.01880	15.72200	13.64550	K562	TIA1
CTDSP1	ENSG00000144579.3	789.13220	583.47230	0.43550	2.80970	1.86550	K562	TIAL1
CTDSP1	ENSG00000144579.3	535.87450	386.69130	0.47060	2.54690	1.50720	K562	TRA2A
CTDSP1	ENSG00000144579.3	638.62130	898.89920	-0.49320	3.77900	1.68270	K562	TRNAU1AP
CTDSP1	ENSG00000144579.3	110.42630	163.42770	-0.56560	2.23930	1.51780	K562	U2AF2
CTDSP1	ENSG00000144579.3	1420.91930	1133.17790	0.32640	4.09660	3.23850	K562	UPF1
CTDSP1	ENSG00000144579.3	419.64520	871.72640	-1.05470	2.75640	1.46920	K562	UTP18
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CTDSP1 is not available on ENCORE database.

4 RBPs can affect the splicing of CTDSP1 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	CTDSP1	ENSG00000144579.3	chr2	+	219266833	219266938			219266836	219266938	219266286	219266435	-0.12600	0.00052	0.04699	shorter	HepG2	HNRNPK
A3SS	CTDSP1	ENSG00000144579.3	chr2	+	219266833	219266938			219266836	219266938	219266286	219266435	0.08600	0.00316	0.06599	longer	HepG2	U2AF2
MXE	CTDSP1	ENSG00000144579.3	chr2	+	219266833	219266938	219267071	219267128	219266286	219266435	219267757	219267850	0.17300	0.00133	0.03987	1included	HepG2	XRN2
MXE	CTDSP1	ENSG00000144579.3	chr2	+	219266833	219266938	219267071	219267128	219266286	219266435	219267757	219267850	0.14600	0.00580	0.09143	1included	HepG2	DDX55

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CTDSP1

General Information

Functions

Localization

Domains (AlphaFold: CTDSP1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CTDSP1 is not avaliable on ENCORE database.

39 proteins are bound to CTDSP1 RNA:

eCLIP assay for CTDSP1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CTDSP1 is not available on ENCORE database.

130 RBPs can affect the gene expression of CTDSP1 :

The Knockdown/knockout RNA-Seq assay for CTDSP1 is not available on ENCORE database.

4 RBPs can affect the splicing of CTDSP1 :

The Knockdown/knockout RNA-Seq assay for CTDSP1 is not avaliable on ENCORE database.