YPEL5

General Information

Gene Name : YPEL5
Gene ID : ENSG00000119801.12
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: YPEL5)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	YPEL5	ENSG00000119801.12	17.46	14.81	16.14	ENCSR000AEF
HepG2	YPEL5	ENSG00000119801.12	19.61	19.34	19.48	ENCSR985KAT
K562	YPEL5	ENSG00000119801.12	8.60	7.35	7.97	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for YPEL5 is not avaliable on ENCORE database.

Proteins bound to RNA

YPEL5 RNA is bound by 11 proteins.

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eCLIP assay for YPEL5 is not avaliable on ENCORE database.

11 proteins are bound to YPEL5 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr2	30382180	30382310	+	3'-UTR	4.88507	74.47624	K562	UPF1
chr2	30382108	30382155	+	3'-UTR	4.39967	44.30290	K562	UPF1
chr2	30382155	30382180	+	3'-UTR	3.99499	33.98737	K562	UPF1
chr2	30382310	30382378	+	3'-UTR	5.69042	21.34172	K562	UPF1
chr2	30382106	30382255	+	3'-UTR	5.04277	18.63906	HepG2	UPF1
chr2	30369993	30370063	+	intron-Distal,intron-Proximal	5.22511	12.13108	HepG2	EFTUD2
chr2	30381887	30381943	+	3'-UTR	4.10099	9.98046	K562	TIA1
chr2	30369897	30369979	+	5'-UTR,intron-Proximal	3.40960	9.57589	HepG2	PRPF8
chr2	30382188	30382230	+	3'-UTR	4.02484	9.46526	K562	FAM120A
chr2	30383035	30383089	+	3'-UTR	3.24135	7.47822	K562	UPF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 19 entries

eCLIP assay for YPEL5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for YPEL5 is not available on ENCORE database.
133 RBPs can affect the levels of YPEL5.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for YPEL5 is not available on ENCORE database.

133 RBPs can affect the gene expression of YPEL5 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
YPEL5	ENSG00000119801.8	3638.80920	1340.25240	1.44090	94.34310	92.47780	HepG2	SRFBP1
YPEL5	ENSG00000119801.8	2868.58880	1186.62790	1.27340	51.91280	50.22140	HepG2	RBM22
YPEL5	ENSG00000119801.8	3277.46980	1383.63030	1.24400	30.20320	28.38820	K562	PUS1
YPEL5	ENSG00000119801.8	1813.77860	668.47450	1.44000	26.07400	24.38690	HepG2	SUPV3L1
YPEL5	ENSG00000119801.8	909.51100	346.83730	1.39070	22.13270	19.71620	K562	BOP1
YPEL5	ENSG00000119801.8	1011.98290	1738.69900	-0.78080	20.08730	18.69360	HepG2	PCBP1
YPEL5	ENSG00000119801.8	1380.44280	609.19300	1.18010	19.79550	18.41570	HepG2	BOP1
YPEL5	ENSG00000119801.8	988.57750	557.58920	0.82610	18.78800	17.08240	K562	NSUN2
YPEL5	ENSG00000119801.8	2363.06960	853.66300	1.46880	16.46250	14.88520	HepG2	RAVER1
YPEL5	ENSG00000119801.8	212.67790	499.68780	-1.23240	16.42600	14.45100	K562	SYNCRIP
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 165 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for YPEL5 is not available on ENCORE database.

27 RBPs can affect the splicing of YPEL5 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	YPEL5	ENSG00000119801.8	chr2	+	30371110	30371407			30369806	30369928	30379493	30379658	0.28300	0.00000	0.00000	included	HepG2	U2AF1
SE	YPEL5	ENSG00000119801.8	chr2	+	30371110	30371407			30369828	30369928	30379493	30379658	0.55600	0.00000	0.00000	included	HepG2	U2AF2
SE	YPEL5	ENSG00000119801.8	chr2	+	30371110	30371407			30369828	30369928	30379493	30379658	0.16600	0.00000	0.00029	included	HepG2	SFPQ
SE	YPEL5	ENSG00000119801.8	chr2	+	30371110	30371407			30369828	30369928	30379493	30379658	-0.09500	0.00000	0.00010	excluded	HepG2	PTBP1
SE	YPEL5	ENSG00000119801.8	chr2	+	30371110	30371407			30369828	30369928	30379493	30379658	-0.08500	0.00000	0.00017	excluded	HepG2	SRSF1
SE	YPEL5	ENSG00000119801.8	chr2	+	30371110	30371407			30369806	30369928	30379493	30379658	-0.19800	0.00000	0.00018	excluded	HepG2	GRSF1
SE	YPEL5	ENSG00000119801.8	chr2	+	30371110	30371407			30369828	30369928	30379493	30379658	0.31200	0.00000	0.00000	included	K562	U2AF2
MXE	YPEL5	ENSG00000119801.8	chr2	+	30371110	30371407	30378715	30378776	30369806	30369928	30379493	30379658	0.22400	0.00000	0.00001	1included	HepG2	U2AF2
MXE	YPEL5	ENSG00000119801.8	chr2	+	30371110	30371407	30378715	30378776	30369806	30369928	30379493	30379658	-0.34900	0.00000	0.00040	2included	HepG2	AKAP1
SE	YPEL5	ENSG00000119801.8	chr2	+	30371110	30371407			30369828	30369928	30379493	30379658	0.17000	0.00001	0.00489	included	K562	LARP4

Showing 1 to 10 of 44 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

YPEL5

General Information

Functions

Localization

Domains (AlphaFold: YPEL5)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for YPEL5 is not avaliable on ENCORE database.

11 proteins are bound to YPEL5 RNA:

eCLIP assay for YPEL5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for YPEL5 is not available on ENCORE database.

133 RBPs can affect the gene expression of YPEL5 :

The Knockdown/knockout RNA-Seq assay for YPEL5 is not available on ENCORE database.

27 RBPs can affect the splicing of YPEL5 :

The Knockdown/knockout RNA-Seq assay for YPEL5 is not avaliable on ENCORE database.