TPD52

General Information

Gene Name       : TPD52
Gene ID             : ENSG00000076554.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TPD52)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TPD52ENSG00000076554.1558.6376.0767.35ENCSR000AEF
HepG2TPD52ENSG00000076554.1525.4841.1833.33ENCSR985KAT
K562TPD52ENSG00000076554.150.090.060.07ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TPD52 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TPD52 RNA is bound by 21 proteins.  







eCLIP assay for TPD52 is not avaliable on ENCORE database.





21 proteins are bound to TPD52 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr88096262180962710-3'-UTR,CDS,intron-Distal,intron-Proximal4.151573.35169HepG2U2AF2
chr88096376080963862-3'-UTR,CDS,intron-Distal,intron-Proximal3.359804.24070HepG2GRWD1
chr88095028180950346-3'-UTR,intron-Distal,intron-Proximal3.215043.17744HepG2GRWD1
chr88096550580965577-3'-UTR,CDS,intron-Distal,intron-Proximal3.339634.26492HepG2BCLAF1
chr88097670980976831-3'-UTR,CDS,intron-Distal,intron-Proximal3.111826.01489HepG2GRWD1
chr88096551080965591-3'-UTR,CDS,intron-Distal,intron-Proximal3.453934.02291HepG2GRWD1
chr88096375380963859-3'-UTR,CDS,intron-Distal,intron-Proximal3.026884.74766HepG2BCLAF1
chr88096559180965668-3'-UTR,CDS,intron-Distal,intron-Proximal4.343214.45558HepG2GRWD1
chr88096557780965667-3'-UTR,CDS,intron-Distal,intron-Proximal3.372824.85828HepG2BCLAF1
chr88094899180949080-3'-UTR,intron-Distal4.398856.93714HepG2FUBP3
chr88108335581083449-5'-UTR,CDS,intron-Distal,intron-Proximal3.906223.29371HepG2IGF2BP1
chr88091520280915296-CDS,intron-Distal,intron-Proximal3.673844.17155HepG2BCLAF1
chr88091505080915279-CDS,intron-Distal,intron-Proximal4.652837.24774K562KHSRP
chr88107041681070503-intron-Distal4.282934.13073HepG2GTF2F1
chr88106906081069139-intron-Distal5.071646.79054HepG2PCBP2
chr88092495680925052-intron-Distal3.924803.22972K562TARDBP
chr88095723280957304-intron-Distal3.796203.19026HepG2HNRNPL
chr88098531280985363-intron-Distal4.802644.51355HepG2PTBP1
chr88091233980912428-intron-Distal3.842753.45317HepG2HNRNPL
chr88100242081002468-intron-Distal3.984653.82697HepG2HNRNPC
chr88094237180942479-CDS,intron-Distal,intron-Proximal3.234225.97131K562DDX3X
chr88107043981070510-intron-Distal4.667954.28089HepG2FAM120A
chr88090160080901693-intron-Distal4.372344.52538HepG2PTBP1
chr88090470780904768-intron-Distal5.1786510.25043K562TARDBP
chr88092798880928058-intron-Distal4.122293.84389HepG2SUGP2
chr88092921380929298-intron-Distal3.708465.79523HepG2SUGP2
chr88093049080930534-intron-Distal3.953773.79098HepG2SUGP2
chr88094234380942447-CDS,intron-Distal5.922498.17127K562RPS3
chr88100152581001581-intron-Distal3.922023.04224HepG2SUGP2
chr88103978581039904-intron-Distal5.2779010.37858HepG2CSTF2
chr88090643780906503-intron-Distal3.778043.49011K562KHSRP
chr88101412781014209-intron-Distal3.244263.30286HepG2PTBP1
chr88090161780901690-intron-Distal4.428283.91475K562PTBP1
chr88107650481076554-intron-Distal4.792116.76922HepG2PTBP1
chr88106606881066141-intron-Distal3.245034.20080HepG2QKI
chr88105317581053246-intron-Distal3.527723.65621HepG2HNRNPL
chr88090628980906415-intron-Distal3.483408.10682K562KHSRP
chr88107622081076333-intron-Distal5.9766015.07938HepG2PTBP1
chr88091834280918417-intron-Distal4.682274.80466K562EXOSC5
chr88097607180976148-intron-Distal4.740494.59452HepG2PCBP2
chr88105300181053092-intron-Distal4.397455.02084HepG2HNRNPM
chr88107039681070533-intron-Distal4.285134.35952HepG2PRPF4
chr88100168181001757-intron-Distal4.309023.54208HepG2SUGP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TPD52 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TPD52 is not available on ENCORE database.

  • 129 RBPs can affect the levels of TPD52.  








The Knockdown/knockout RNA-Seq assay for TPD52 is not available on ENCORE database.





129 RBPs can affect the gene expression of TPD52 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TPD52ENSG00000076554.11453.29560868.91210-0.938806.798604.20010HepG2AARS
TPD52ENSG00000076554.111091.67700758.772800.524705.098003.68280HepG2AATF
TPD52ENSG00000076554.11685.623801000.61610-0.545404.440203.26810HepG2ABCF1
TPD52ENSG00000076554.11467.22310968.00620-1.0509014.0132012.04040HepG2ADAR
TPD52ENSG00000076554.11790.453101052.81260-0.413505.014804.00720HepG2AKAP8L
TPD52ENSG00000076554.11583.537601239.63180-1.0870015.9133014.19560HepG2ASCC1
TPD52ENSG00000076554.11602.91770886.51720-0.556203.199102.19150HepG2BCCIP
TPD52ENSG00000076554.11530.34330784.50000-0.564804.853304.08900HepG2BOP1
TPD52ENSG00000076554.111158.619201631.64540-0.493903.360302.27530HepG2CCAR1
TPD52ENSG00000076554.11662.905501177.74590-0.8292010.072608.67770HepG2CIRBP
TPD52ENSG00000076554.11759.884701047.66630-0.463307.031806.06070HepG2CKAP4
TPD52ENSG00000076554.11781.139801101.64540-0.496002.542901.81120HepG2CNOT7
TPD52ENSG00000076554.11546.37640720.22430-0.398602.542401.87870HepG2CPSF6
TPD52ENSG00000076554.11309.99990547.72530-0.821207.059305.45960HepG2CSTF2
TPD52ENSG00000076554.111708.045601421.371400.265002.578401.95460HepG2CELF1
TPD52ENSG00000076554.11551.22370969.13920-0.8141017.9757016.28820HepG2DDX19B
TPD52ENSG00000076554.11226.80310837.14030-1.8840040.7423038.59880HepG2DDX21
TPD52ENSG00000076554.11490.615601049.02090-1.0964016.9036014.71830HepG2DDX5
TPD52ENSG00000076554.112082.770701232.965000.756303.860003.14050HepG2DDX6
TPD52ENSG00000076554.11578.530801002.53160-0.7932014.3692013.07780HepG2DKC1
TPD52ENSG00000076554.11795.23380974.78760-0.293701.941801.34150HepG2DNAJC21
TPD52ENSG00000076554.11722.43890966.06050-0.419205.116604.27350HepG2DNAJC2
TPD52ENSG00000076554.11603.11420860.52990-0.512802.886901.94670HepG2EEF2
TPD52ENSG00000076554.11501.89360717.46790-0.515502.834301.71360HepG2EFTUD2
TPD52ENSG00000076554.11513.301601185.11960-1.2072018.3202016.88780HepG2EIF2S1
TPD52ENSG00000076554.11527.35870790.55280-0.584106.079904.57060HepG2EIF3G
TPD52ENSG00000076554.11524.445901309.61920-1.3203019.9790018.28400HepG2EIF4A3
TPD52ENSG00000076554.11783.263001507.81040-0.9449011.7116010.22760HepG2EIF4G1
TPD52ENSG00000076554.111109.788501444.41770-0.380203.256402.37690HepG2EIF4G2
TPD52ENSG00000076554.11588.04460866.65120-0.559505.141403.69420HepG2ESF1
TPD52ENSG00000076554.11930.414301505.15730-0.6940010.077509.04720HepG2ETF1
TPD52ENSG00000076554.11410.111501023.97720-1.3201027.1117024.80820HepG2EWSR1
TPD52ENSG00000076554.11804.35570624.280500.365503.030301.79770HepG2FAM120A
TPD52ENSG00000076554.111009.08320797.772000.338902.538401.43880HepG2FASTKD2
TPD52ENSG00000076554.111315.934301010.338000.381102.043101.37590HepG2FIP1L1
TPD52ENSG00000076554.11907.09460658.897800.461103.969703.03620HepG2FUBP3
TPD52ENSG00000076554.11833.772401142.07320-0.453902.522401.45470HepG2FUS
TPD52ENSG00000076554.111004.691101321.58450-0.395502.895202.18700HepG2FXR1
TPD52ENSG00000076554.11843.902701225.84050-0.538604.389203.55950HepG2G3BP1
TPD52ENSG00000076554.11833.112601301.54750-0.643606.647505.25770HepG2G3BP2
TPD52ENSG00000076554.11415.17470622.03890-0.583304.233003.11270HepG2GEMIN5
TPD52ENSG00000076554.11579.00750816.45930-0.495803.243102.55490HepG2GPKOW
TPD52ENSG00000076554.11550.21850984.12500-0.838809.844308.73570HepG2HNRNPA1
TPD52ENSG00000076554.11416.283401094.61750-1.3948026.9390025.04970HepG2HNRNPC
TPD52ENSG00000076554.11595.43970831.98380-0.482605.335004.37940HepG2HNRNPF
TPD52ENSG00000076554.11681.430701087.38350-0.6742012.2238011.02410HepG2HNRNPU
TPD52ENSG00000076554.11604.60840819.27230-0.438303.641502.81990HepG2IGF2BP1
TPD52ENSG00000076554.11662.082101245.99640-0.9122011.7884010.50040HepG2IGF2BP2
TPD52ENSG00000076554.11747.469301169.48990-0.645802.480501.55610HepG2IGF2BP3
TPD52ENSG00000076554.11821.118301253.34120-0.610104.510003.19970HepG2KHSRP
TPD52ENSG00000076554.11277.31860979.80380-1.820906.496604.59140HepG2KRR1
TPD52ENSG00000076554.11906.563601722.07820-0.925709.616308.07070HepG2LARP4
TPD52ENSG00000076554.11630.96790823.68460-0.384502.583701.48610HepG2LARP7
TPD52ENSG00000076554.11653.18550865.00980-0.405202.696801.50320HepG2LIN28B
TPD52ENSG00000076554.11799.415501322.04700-0.725807.871006.77870HepG2MAGOH
TPD52ENSG00000076554.11458.50360697.61510-0.605504.676002.62750HepG2MARK2
TPD52ENSG00000076554.11300.573001329.40830-2.1450045.9593043.65340HepG2MATR3
TPD52ENSG00000076554.11525.94290817.50690-0.636306.882405.66370HepG2MSI2
TPD52ENSG00000076554.11514.80340794.57810-0.626203.535602.43020HepG2MTPAP
TPD52ENSG00000076554.11976.965801360.69240-0.478003.747003.01410HepG2NCBP2
TPD52ENSG00000076554.111106.312501515.67510-0.454205.061304.03300HepG2NOL12
TPD52ENSG00000076554.11531.54920690.85290-0.378202.190001.52240HepG2NSUN2
TPD52ENSG00000076554.11510.888601083.14130-1.084103.467101.41190HepG2NUFIP2
TPD52ENSG00000076554.111613.096301006.942800.679804.103503.00810HepG2PABPC1
TPD52ENSG00000076554.11918.827401176.77650-0.357004.123103.40960HepG2PCBP1
TPD52ENSG00000076554.11278.19540577.72470-1.0543011.538909.24550HepG2PKM
TPD52ENSG00000076554.11665.38610969.86610-0.543607.075905.93860HepG2PPIL4
TPD52ENSG00000076554.11357.28230653.16090-0.8704013.0038011.51320HepG2PRPF4
TPD52ENSG00000076554.11954.389801197.43660-0.327303.093102.52070HepG2PTBP1
TPD52ENSG00000076554.11805.827301446.78750-0.8443014.2765013.06450HepG2PUF60
TPD52ENSG00000076554.111056.448701535.76190-0.5397012.8849011.80240HepG2PUM1
TPD52ENSG00000076554.11974.457101534.68170-0.655304.971204.08580HepG2PUM2
TPD52ENSG00000076554.11789.277901067.32420-0.435406.083905.23390HepG2PUS1
TPD52ENSG00000076554.111004.704001296.80540-0.368203.700502.99410HepG2QKI
TPD52ENSG00000076554.111578.462901043.438000.597103.242702.48240HepG2RAVER1
TPD52ENSG00000076554.111552.326601256.024300.305502.851501.98230HepG2RBM15
TPD52ENSG00000076554.11716.96830993.21150-0.470203.251602.17150HepG2RBM27
TPD52ENSG00000076554.11472.75300958.08120-1.019103.207801.45060HepG2RBM39
TPD52ENSG00000076554.11909.041801332.61330-0.551808.663707.80440HepG2NELFE
TPD52ENSG00000076554.11838.006401241.18210-0.566709.141208.12020HepG2RECQL
TPD52ENSG00000076554.11493.18160896.16390-0.8616010.705509.51180HepG2RPLP0
TPD52ENSG00000076554.11613.176601024.81810-0.741005.214303.93920HepG2RPS10
TPD52ENSG00000076554.11296.18670679.73070-1.1985014.8307013.56120HepG2RPS19
TPD52ENSG00000076554.11444.65100916.03660-1.0427013.7080012.02500HepG2RPS2
TPD52ENSG00000076554.11639.352801106.33780-0.791106.718505.47950HepG2RPS3A
TPD52ENSG00000076554.11425.51370968.38640-1.1864026.6435024.92780HepG2SAFB2
TPD52ENSG00000076554.11445.61520682.29310-0.614604.907303.66640HepG2SERBP1
TPD52ENSG00000076554.11427.442801054.04860-1.302104.755902.87960HepG2SF1
TPD52ENSG00000076554.11543.91070771.23080-0.503803.794902.97970HepG2SF3B1
TPD52ENSG00000076554.11940.798101246.64570-0.406105.147204.38270HepG2SF3B4
TPD52ENSG00000076554.111098.001401387.10630-0.337205.047804.14490HepG2SLBP
TPD52ENSG00000076554.11517.732901017.90240-0.975304.909502.83160HepG2SLTM
TPD52ENSG00000076554.11744.775001129.34160-0.600609.169808.10720HepG2SMN1
TPD52ENSG00000076554.111169.06280858.123500.446002.271801.56730HepG2SNRNP70
TPD52ENSG00000076554.111856.017901420.963200.385206.784306.09660HepG2SRFBP1
TPD52ENSG00000076554.111075.691101301.24470-0.274602.780402.30630HepG2SRSF1
TPD52ENSG00000076554.11906.818601428.41170-0.6555013.7745012.52450HepG2SRSF5
TPD52ENSG00000076554.11588.76020817.37660-0.473305.127504.22660HepG2SRSF7
TPD52ENSG00000076554.111603.432201058.646100.598804.939304.24130HepG2SRSF9
TPD52ENSG00000076554.11576.993301233.79780-1.0965018.6760017.59660HepG2SSB
TPD52ENSG00000076554.11699.34730962.43290-0.460702.752401.65450HepG2STIP1
TPD52ENSG00000076554.111444.40850975.094500.566803.554602.17770HepG2SUB1
TPD52ENSG00000076554.11848.663201624.56630-0.9368025.0058023.44350HepG2SUCLG1
TPD52ENSG00000076554.11449.82860867.72210-0.947908.482207.40370HepG2SUPV3L1
TPD52ENSG00000076554.11540.488701169.65520-1.1137026.0552024.56700HepG2TAF15
TPD52ENSG00000076554.11372.465701056.74500-1.5044034.6765033.26620HepG2TIAL1
TPD52ENSG00000076554.111016.693301413.34080-0.475205.500404.21850HepG2TUFM
TPD52ENSG00000076554.11596.906501095.94760-0.876602.457001.53380HepG2U2AF2
TPD52ENSG00000076554.111065.537001495.92720-0.489503.975102.96150HepG2UBE2L3
TPD52ENSG00000076554.11530.48860794.76370-0.583202.800801.78940HepG2UPF2
TPD52ENSG00000076554.11561.06960840.04490-0.582307.629706.71620HepG2UTP3
TPD52ENSG00000076554.11591.761401025.91770-0.793806.093904.23210HepG2XRCC5
TPD52ENSG00000076554.11387.26660854.17500-1.1412012.0047010.51710HepG2XRN2
TPD52ENSG00000076554.11533.99010644.55400-0.271501.972001.39000HepG2ZC3H8
TPD52ENSG00000076554.111403.42520956.941200.5523012.0572011.11650HepG2ZNF622
TPD52ENSG00000076554.1185.9129029.229301.555405.470204.71510K562AGGF1
TPD52ENSG00000076554.11125.4359030.413802.0441011.350609.90240K562AKAP8L
TPD52ENSG00000076554.1185.7385029.472001.540503.229902.60500K562AQR
TPD52ENSG00000076554.1174.5236031.910301.223603.696102.62770K562ATP5C1
TPD52ENSG00000076554.1182.9422032.731101.341304.580603.41310K562DKC1
TPD52ENSG00000076554.115.6530042.55390-2.912203.802803.11050K562FXR1
TPD52ENSG00000076554.11136.3011016.362203.0583011.353409.79790K562GRSF1
TPD52ENSG00000076554.1155.3315022.841301.276403.062501.93150K562HNRNPA1
TPD52ENSG00000076554.1157.1883025.295401.176702.788401.89060K562HNRNPU
TPD52ENSG00000076554.11103.5690032.278701.681806.589405.19090K562KIF1C
TPD52ENSG00000076554.1114.1716036.70820-1.373102.429601.57160K562MATR3
TPD52ENSG00000076554.1192.2882033.545601.459904.187202.80100K562MSI2
TPD52ENSG00000076554.1183.7188020.056902.061407.781106.48480K562MTPAP
TPD52ENSG00000076554.1163.7214025.345401.330002.885001.98100K562NAA15
TPD52ENSG00000076554.1173.7011025.741801.517503.264601.62760K562PPP1R8
TPD52ENSG00000076554.117.3960035.73930-2.272704.710203.86610K562PTBP1
TPD52ENSG00000076554.11123.0645030.166402.028309.711708.74280K562PUS1
TPD52ENSG00000076554.11112.2327029.389101.933009.575008.49610K562RBM15
TPD52ENSG00000076554.1125.7705073.29170-1.507903.557902.40890K562RPS3
TPD52ENSG00000076554.1155.8400016.012001.802003.863501.98580K562SBDS
TPD52ENSG00000076554.1163.9128035.037700.867101.906701.30700K562SRSF1
TPD52ENSG00000076554.1131.1555070.76360-1.183502.852201.77900K562SRSF4
TPD52ENSG00000076554.1198.3009027.897201.817004.326201.82440K562SUGP2
TPD52ENSG00000076554.114.9256019.81100-2.007902.125601.40450K562SYNCRIP
TPD52ENSG00000076554.1145.0585019.087101.239102.200601.37530K562TIAL1
TPD52ENSG00000076554.11142.2183030.581302.2173010.689907.70070K562UTP18
TPD52ENSG00000076554.1156.5451020.226601.483003.690502.68010K562WDR3
TPD52ENSG00000076554.11105.8810033.162901.674704.410003.28030K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TPD52 is not available on ENCORE database.






No RBPs affect the alternative splcing events of TPD52 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for TPD52 is not avaliable on ENCORE database.