SCRIB

General Information

Gene Name       : SCRIB
Gene ID             : ENSG00000180900.18
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: SCRIB)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SCRIBENSG00000180900.180.092.061.07ENCSR000AEF
HepG2SCRIBENSG00000180900.1826.323.0214.67ENCSR985KAT
K562SCRIBENSG00000180900.1822.095.2513.67ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SCRIB is not avaliable on ENCORE database.



Proteins bound to RNA

  • SCRIB RNA is bound by 47 proteins.  







eCLIP assay for SCRIB is not avaliable on ENCORE database.





47 proteins are bound to SCRIB RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr8144873149144873237-3'-UTR,intron-Distal4.5407613.57527K562PUM2
chr8144886174144886222-CDS,intron-Distal,intron-Proximal4.159257.26133HepG2PRPF8
chr8144888534144888579-CDS,intron-Distal,intron-Proximal4.2454813.09382K562AQR
chr8144895485144895534-CDS,intron-Distal3.184018.39972K562BUD13
chr8144877589144877606-CDS,intron-Distal,intron-Proximal5.1781211.01364K562DDX24
chr8144873603144873632-CDS,intron-Distal,intron-Proximal3.636865.83621K562AQR
chr8144873878144873960-CDS,intron-Distal,intron-Proximal4.580597.94395K562PRPF8
chr8144890778144890851-CDS,intron-Distal,intron-Proximal3.9805711.69958K562ZNF622
chr8144895806144895841-CDS,intron-Distal,intron-Proximal5.2067215.33327HepG2PPIG
chr8144893315144893339-CDS,intron-Distal,intron-Proximal4.345895.07887K562FXR2
chr8144873473144873523-CDS,intron-Distal,intron-Proximal4.3054412.68494K562SF3B4
chr8144873600144873657-CDS,intron-Distal,intron-Proximal8.2245057.87805K562SF3B4
chr8144874710144874790-CDS,intron-Distal,intron-Proximal3.043997.02688HepG2PPIG
chr8144890826144890849-CDS,intron-Distal,intron-Proximal4.169646.36347HepG2PPIG
chr8144895668144895719-CDS,intron-Distal,intron-Proximal3.104434.09756HepG2AQR
chr8144896049144896140-CDS,intron-Distal,intron-Proximal4.0831918.99448K562EFTUD2
chr8144896051144896076-CDS,intron-Distal,intron-Proximal3.750236.37739K562BUD13
chr8144877454144877481-CDS,intron-Distal3.331564.92880K562ZNF622
chr8144891723144891741-CDS,intron-Distal3.035854.09989K562UCHL5
chr8144890779144890865-CDS,intron-Distal,intron-Proximal3.010986.77513K562GRWD1
chr8144885519144885569-CDS,intron-Distal,intron-Proximal4.351515.05356HepG2PRPF8
chr8144873576144873600-CDS,intron-Distal4.213956.67591K562SF3B4
chr8144877589144877628-CDS,intron-Distal,intron-Proximal5.3502511.08513HepG2PPIG
chr8144890748144890806-CDS,intron-Distal,intron-Proximal3.594884.22460K562RBM15
chr8144890777144890796-CDS,intron-Distal,intron-Proximal4.474489.48722K562UCHL5
chr8144876085144876105-CDS,intron-Distal4.048047.40409K562BUD13
chr8144877455144877501-CDS,intron-Distal,intron-Proximal5.6854414.58110K562DDX24
chr8144896144144896182-CDS,intron-Distal,intron-Proximal3.765237.85990HepG2PRPF8
chr8144889121144889164-CDS,intron-Distal4.9066111.99167HepG2PPIG
chr8144889747144889840-CDS,intron-Distal,intron-Proximal3.877579.44825K562MTPAP
chr8144896063144896143-CDS,intron-Distal,intron-Proximal5.7739921.23371K562AQR
chr8144890784144890879-CDS,intron-Distal,intron-Proximal3.186167.67473K562ZNF800
chr8144890815144890860-CDS,intron-Distal,intron-Proximal3.533783.57857HepG2BCLAF1
chr8144890778144890803-CDS,intron-Distal,intron-Proximal5.0317314.73608K562DDX24
chr8144890815144890838-CDS,intron-Distal4.4250310.65187K562DDX24
chr8144889721144889768-CDS,intron-Distal,intron-Proximal3.533783.28366HepG2BCLAF1
chr8144890815144890864-CDS,intron-Distal,intron-Proximal4.538204.22122K562DDX55
chr8144892671144892711-CDS,intron-Distal3.957764.01763HepG2GRWD1
chr8144895019144895108-CDS,intron-Distal,intron-Proximal3.934534.52272K562SRSF1
chr8144873598144873659-CDS,intron-Distal,intron-Proximal5.5671433.18266HepG2SF3B4
chr8144873603144873665-CDS,intron-Distal,intron-Proximal3.854843.59284HepG2LSM11
chr8144877456144877485-CDS,intron-Distal4.207237.55042HepG2PPIG
chr8144886301144886361-CDS,intron-Distal,intron-Proximal4.5770711.83800K562AQR
chr8144897414144897463-CDS,intron-Distal3.766913.01533HepG2SRSF1
chr8144890746144890798-CDS,intron-Distal,intron-Proximal4.665449.70941HepG2PRPF8
chr8144891077144891177-CDS,intron-Distal3.394916.30560HepG2SRSF1
chr8144895115144895150-CDS,intron-Distal,intron-Proximal3.808434.58287K562PRPF8
chr8144889764144889782-CDS,intron-Distal5.0579615.36057K562DDX24
chr8144890786144890870-CDS,intron-Distal,intron-Proximal4.792065.41896HepG2FXR2
chr8144887569144887630-CDS,intron-Distal,intron-Proximal3.460435.58816K562PRPF8
chr8144874657144874686-CDS,intron-Distal,intron-Proximal3.988143.46058HepG2PABPN1
chr8144893160144893193-CDS,intron-Distal3.118983.73997K562ZNF622
chr8144895482144895524-CDS,intron-Distal4.4610516.62315K562DDX24
chr8144892659144892713-CDS,intron-Distal4.060643.91585HepG2PRPF4
chr8144874818144874829-CDS,intron-Distal,intron-Proximal4.711773.65355K562EFTUD2
chr8144895204144895228-CDS,intron-Distal,intron-Proximal5.001038.08515K562DDX24
chr8144896051144896144-CDS,intron-Distal,intron-Proximal4.1720518.42957HepG2PRPF8
chr8144873607144873660-CDS,intron-Distal,intron-Proximal3.863935.90397HepG2SF3A3
chr8144895447144895514-CDS,intron-Distal,intron-Proximal4.0809812.18707HepG2PRPF8
chr8144890774144890932-CDS,intron-Distal,intron-Proximal3.492567.30231K562SRSF1
chr8144893223144893242-CDS,intron-Distal,intron-Proximal4.101374.78507K562FXR2
chr8144885948144885973-CDS,intron-Distal3.288096.00907HepG2PPIG
chr8144895690144895695-CDS,intron-Distal3.035545.77687HepG2PPIG
chr8144891181144891193-CDS,intron-Distal3.059624.30396K562UCHL5
chr8144889136144889181-CDS,intron-Distal3.7629015.73919K562DDX24
chr8144873559144873582-CDS,intron-Distal3.448786.54857HepG2PPIG
chr8144889730144889752-CDS,intron-Distal4.231698.43090K562DDX24
chr8144873592144873603-CDS,intron-Distal3.721834.49024K562AQR
chr8144895095144895157-CDS,intron-Distal,intron-Proximal3.142638.54207HepG2PRPF8
chr8144887555144887633-CDS,intron-Distal,intron-Proximal3.445208.69914K562AQR
chr8144895129144895169-CDS,intron-Distal,intron-Proximal4.930433.91589K562SF3B4
chr8144877198144877209-CDS,intron-Distal,intron-Proximal3.369555.28960K562AQR
chr8144895656144895738-CDS,intron-Distal,intron-Proximal3.283976.71915K562PRPF8
chr8144890796144890873-CDS,intron-Distal,intron-Proximal4.9830618.47344K562UCHL5
chr8144889748144889784-CDS,intron-Distal4.311537.79539K562UCHL5
chr8144877588144877630-CDS,intron-Distal,intron-Proximal4.588725.85497HepG2GRWD1
chr8144894387144894490-CDS,intron-Distal,intron-Proximal5.4834723.86441HepG2PRPF8
chr8144895810144895877-CDS,intron-Distal3.160815.74981HepG2GRWD1
chr8144895034144895097-CDS,intron-Distal3.491444.96025HepG2SRSF1
chr8144890776144890792-CDS,intron-Distal,intron-Proximal3.420715.19978HepG2BUD13
chr8144886083144886113-CDS,intron-Distal,intron-Proximal3.184566.41344HepG2PRPF8
chr8144895485144895529-CDS,intron-Distal3.8893911.64759HepG2PPIG
chr8144874004144874060-CDS,intron-Distal,intron-Proximal3.704039.77953HepG2PRPF8
chr8144888537144888612-CDS,intron-Distal,intron-Proximal4.1783415.19376HepG2PRPF8
chr8144887547144887599-CDS,intron-Distal3.7419610.46300HepG2PPIG
chr8144891887144891910-CDS,intron-Distal,intron-Proximal3.002755.12902K562SF3B4
chr8144897435144897521-CDS,intron-Distal3.010093.26004K562PUM1
chr8144890948144891020-CDS,intron-Distal4.416817.03491K562RBM15
chr8144892680144892733-CDS,intron-Distal4.016434.13050K562LIN28B
chr8144876068144876106-CDS,intron-Distal,intron-Proximal3.882609.30518HepG2PPIG
chr8144886686144886740-CDS,intron-Distal,intron-Proximal4.040657.77750HepG2PRPF8
chr8144895665144895710-CDS,intron-Distal,intron-Proximal3.250587.35853HepG2PRPF8
chr8144874905144874963-CDS,intron-Distal5.390928.49462K562FXR2
chr8144889766144889846-CDS,intron-Distal,intron-Proximal3.588545.00859HepG2RBFOX2
chr8144877260144877302-CDS,intron-Distal,intron-Proximal3.636865.83621K562AQR
chr8144877214144877259-CDS,intron-Distal3.580297.40344HepG2PPIG
chr8144892656144892723-CDS,intron-Distal3.1180010.33497HepG2PPIG
chr8144877210144877247-CDS,intron-Distal3.772283.16390K562SRSF1
chr8144887569144887606-CDS,intron-Distal,intron-Proximal3.674856.11414K562BUD13
chr8144895991144896014-CDS,intron-Distal,intron-Proximal4.065465.93840HepG2PRPF8
chr8144892676144892754-CDS,intron-Distal3.160923.01092HepG2LIN28B
chr8144892953144892983-CDS,intron-Distal,intron-Proximal4.460237.79455HepG2PPIG
chr8144892674144892695-CDS,intron-Distal3.963305.30520K562UCHL5
chr8144890805144890883-CDS,intron-Distal,intron-Proximal3.071383.67092HepG2G3BP1
chr8144890838144890859-CDS,intron-Distal,intron-Proximal4.4579512.34598K562DDX24
chr8144873388144873469-CDS,intron-Distal,intron-Proximal4.084556.22966HepG2LSM11
chr8144887821144887960-intron-Distal3.760394.37001K562EFTUD2
chr8144886683144886723-intron-Distal,intron-Proximal5.7965222.62597K562AQR
chr8144875904144875956-intron-Distal3.562569.85344K562BUD13
chr8144885220144885294-intron-Distal4.261714.12150K562LSM11
chr8144882819144882861-intron-Distal3.058033.35050HepG2SUGP2
chr8144873612144873663-intron-Distal,intron-Proximal3.408843.77433K562XRN2
chr8144894102144894127-intron-Distal3.749645.78807K562BUD13
chr8144876750144876804-intron-Distal4.500815.32062K562EFTUD2
chr8144887897144887990-intron-Distal3.115314.58795K562EWSR1
chr8144889303144889357-intron-Distal4.399085.98353HepG2EFTUD2
chr8144891646144891705-intron-Distal,intron-Proximal5.162635.65342K562AQR
chr8144877421144877436-intron-Distal,intron-Proximal5.234825.69951K562AQR
chr8144877407144877437-intron-Distal,intron-Proximal5.243035.68502HepG2PRPF8
chr8144887871144887927-intron-Distal3.726304.93080K562AKAP8L
chr8144892333144892364-intron-Distal4.974976.66402K562BUD13
chr8144896076144896134-intron-Distal,intron-Proximal4.6779910.85397HepG2BUD13
chr8144892278144892390-intron-Distal3.690445.52022HepG2FAM120A
chr8144887623144887666-intron-Distal,intron-Proximal5.323287.45449HepG2SF3B4
chr8144892322144892386-intron-Distal3.768215.38546K562RBFOX2
chr8144896114144896133-intron-Distal,intron-Proximal5.4773411.24400HepG2PPIG
chr8144894409144894430-intron-Distal,intron-Proximal3.464544.83230K562AQR
chr8144887190144887255-intron-Distal,intron-Proximal4.716566.66303HepG2SF3B4
chr8144889790144889861-intron-Distal,intron-Proximal3.174825.08270HepG2SF3B4
chr8144875720144875776-intron-Distal,intron-Proximal3.876183.06537K562RBFOX2
chr8144892265144892322-intron-Distal3.598814.13525K562RBFOX2
chr8144875519144875602-intron-Distal3.324254.14725HepG2DDX59
chr8144892324144892396-intron-Distal3.998123.30705HepG2GTF2F1
chr8144896092144896144-intron-Distal,intron-Proximal3.6218012.43122K562BUD13
chr8144892242144892323-intron-Distal4.054193.39866K562LSM11
chr8144885222144885276-intron-Distal3.876133.07008K562NONO
chr8144887915144887982-intron-Distal4.193383.25012HepG2FKBP4
chr8144875982144876070-intron-Distal,intron-Proximal4.7739919.25239K562AQR
chr8144877436144877446-intron-Distal,intron-Proximal4.049854.00320K562AQR
chr8144892317144892370-intron-Distal4.922486.48028K562PRPF8
chr8144873956144874041-intron-Distal,intron-Proximal3.263126.35796K562AQR
chr8144875880144875961-intron-Distal3.459746.27172K562RBFOX2
chr8144875283144875348-intron-Distal,intron-Proximal4.8363014.61447K562SF3B4
chr8144893832144893969-intron-Distal3.647916.76440K562GTF2F1
chr8144892792144892826-intron-Distal,intron-Proximal3.835783.05889HepG2SF3B4
chr8144888116144888216-intron-Distal5.1276516.32593HepG2XPO5
chr8144886697144886735-intron-Distal,intron-Proximal4.591955.33214K562PRPF8
chr8144892389144892453-intron-Distal3.879353.86417HepG2PRPF4
chr8144887610144887704-intron-Distal,intron-Proximal5.6594823.14881K562SF3B4
chr8144875968144876041-intron-Distal,intron-Proximal4.823286.36553HepG2RBFOX2
chr8144892030144892118-intron-Distal4.022753.53404K562HNRNPM
chr8144875905144875968-intron-Distal3.373053.76326HepG2RBFOX2
chr8144892283144892405-intron-Distal4.414579.38858HepG2RBFOX2
chr8144893870144893920-intron-Distal3.002923.59085K562AKAP8L
chr8144874083144874120-intron-Distal,intron-Proximal4.893064.83371K562EFTUD2
chr8144877290144877353-intron-Distal,intron-Proximal3.791635.09328HepG2SF3B4
chr8144892153144892221-intron-Distal3.691765.52268HepG2RBFOX2
chr8144884665144884736-intron-Distal3.549634.25264K562NONO
chr8144876004144876067-intron-Distal,intron-Proximal3.809249.50921HepG2PRPF8
chr8144896080144896140-intron-Distal,intron-Proximal3.9736414.72937K562SF3B4
chr8144892391144892449-intron-Distal4.009613.87340HepG2CSTF2T
chr8144896084144896151-intron-Distal,intron-Proximal5.241085.68078HepG2AQR
chr8144896091144896135-intron-Distal,intron-Proximal4.033805.42720K562UCHL5
chr8144895918144895936-intron-Distal,intron-Proximal4.997354.24111K562EFTUD2
chr8144892615144892635-intron-Distal,intron-Proximal4.903994.35676HepG2PRPF8
chr8144877165144877198-intron-Distal,intron-Proximal3.540077.16774K562AQR
chr8144875519144875615-intron-Distal4.639228.82626HepG2PCBP2
chr8144873674144873692-intron-Distal,intron-Proximal4.758455.13952K562SF3B4
chr8144875857144875955-intron-Distal,intron-Proximal5.7828517.48476HepG2EFTUD2
chr8144891910144891932-intron-Distal,intron-Proximal5.069206.02529K562SF3B4
chr8144894224144894292-intron-Distal5.2774910.42241HepG2RBFOX2
chr8144892294144892389-intron-Distal4.908807.66822HepG2PRPF4
chr8144892314144892385-intron-Distal4.781405.90351K562AKAP8L
chr8144893858144893953-intron-Distal3.332793.00221HepG2CSTF2T
chr8144893853144893928-intron-Distal3.3521310.04520K562SF3B4
chr8144887880144887968-intron-Distal4.462895.34533K562NONO
chr8144893829144893906-intron-Distal3.678889.47365K562EFTUD2
chr8144895759144895806-intron-Distal,intron-Proximal4.186183.95187HepG2AQR
chr8144891933144892060-intron-Distal,intron-Proximal4.758016.70265K562EWSR1
chr8144887895144887957-intron-Distal4.3561614.22454K562BUD13
chr8144893653144893743-intron-Distal3.153354.88392HepG2RBFOX2
chr8144892288144892347-intron-Distal3.693515.32169K562EFTUD2
chr8144877437144877446-intron-Distal,intron-Proximal5.147615.01842HepG2PRPF8
chr8144875987144876039-intron-Distal,intron-Proximal4.0614513.07571K562BUD13
chr8144875974144876053-intron-Distal,intron-Proximal4.443893.53160K562RBFOX2
chr8144875996144876027-intron-Distal,intron-Proximal4.4512611.52509K562DDX24
chr8144882326144882407-intron-Distal3.885175.66122HepG2MATR3
chr8144889059144889088-intron-Distal,intron-Proximal3.864994.45914HepG2PRPF8
chr8144875307144875365-intron-Distal,intron-Proximal4.345824.50934HepG2RBFOX2
chr8144875305144875376-intron-Distal,intron-Proximal3.6732013.41312K562BUD13
chr8144894083144894177-intron-Distal3.522596.52915K562RBFOX2
chr8144874084144874129-intron-Distal,intron-Proximal5.861689.44792K562SF3B4
chr8144893652144893750-intron-Distal4.090087.47076HepG2PRPF4
chr8144893833144893976-intron-Distal4.0543612.64784HepG2PRPF4
chr8144893687144893724-intron-Distal4.705718.54916K562SF3B4
chr8144894320144894370-intron-Distal,intron-Proximal4.550817.04874K562EFTUD2
chr8144892278144892317-intron-Distal3.676914.35635K562PRPF8
chr8144875941144876024-intron-Distal,intron-Proximal4.5508112.61143K562EFTUD2
chr8144892308144892369-intron-Distal4.258013.02711K562EWSR1
chr8144875896144875919-intron-Distal3.768384.49024K562AQR
chr8144876601144876662-intron-Distal4.361633.60290K562AKAP8L
chr8144892273144892387-intron-Distal4.215036.93263K562GTF2F1
chr8144892275144892385-intron-Distal3.737737.14178K562DROSHA
chr8144892405144892478-intron-Distal4.618624.97791HepG2RBFOX2
chr8144889633144889706-intron-Distal,intron-Proximal3.064353.89868HepG2RBFOX2
chr8144888255144888299-intron-Distal3.153723.36199K562EWSR1
chr8144882639144882691-intron-Distal3.199933.00129HepG2SUGP2
chr8144882315144882428-intron-Distal5.5259711.61033HepG2SUGP2
chr8144887870144887929-intron-Distal4.340965.83966K562DROSHA
chr8144894430144894436-intron-Distal,intron-Proximal3.243363.07246K562AQR
chr8144894382144894409-intron-Distal,intron-Proximal3.566314.83230K562AQR
chr8144889785144889831-intron-Distal,intron-Proximal4.165963.79177K562SMNDC1
chr8144892093144892122-intron-Distal3.569126.64170K562BUD13
chr8144881112144881185-intron-Distal3.611274.14346HepG2SUGP2
chr8144873912144873940-intron-Distal,intron-Proximal3.880855.90868HepG2PRPF8
chr8144893808144893970-intron-Distal3.2032310.40347K562RBFOX2
chr8144887877144887927-intron-Distal4.0884711.37858K562SF3B4
chr8144875294144875371-intron-Distal,intron-Proximal3.872886.50806K562RBFOX2
chr8144880926144881017-intron-Distal4.542924.60209HepG2MATR3
chr8144875906144875964-intron-Distal4.4552814.23871HepG2PRPF8
chr8144873740144873832-intron-Distal,intron-Proximal4.8798611.15227HepG2RBFOX2
chr8144888244144888306-intron-Distal3.289997.43356K562TIA1
chr8144897343144897379-intron-Distal4.623634.09264K562AQR
chr8144893860144893917-intron-Distal3.094816.05977K562UCHL5
chr8144895715144895755-intron-Distal,intron-Proximal4.594547.04874K562EFTUD2
chr8144887876144887923-intron-Distal5.021205.08739K562XRCC6
chr8144876000144876052-intron-Distal,intron-Proximal3.328915.32296K562PRPF8
chr8144873958144874023-intron-Distal,intron-Proximal5.402458.02154HepG2RBM22
chr8144881879144881932-intron-Distal3.482534.60009HepG2SUGP2
chr8144873784144873823-intron-Distal,intron-Proximal3.522746.65114HepG2PRPF8
chr8144884123144884198-intron-Distal4.528726.13283K562NONO
chr8144893642144893736-intron-Distal4.049597.77222K562RBFOX2
chr8144889296144889343-intron-Distal4.331823.71567HepG2RBFOX2
chr8144887869144887975-intron-Distal3.972615.70834K562RBFOX2
chr8144875857144875967-intron-Distal,intron-Proximal3.3911613.69171K562PRPF8
chr8144893839144893935-intron-Distal3.0134711.29163K562BUD13
chr8144887910144887984-intron-Distal4.191764.43116HepG2RBFOX2
chr8144895697144895732-intron-Distal,intron-Proximal4.430437.56947K562SF3B4
chr8144878492144878640-intron-Distal4.626285.89032HepG2QKI
chr8144875465144875616-intron-Distal4.042873.33442K562HNRNPK
chr8144892053144892136-intron-Distal3.555087.30623K562RBFOX2
chr8144892278144892382-intron-Distal4.754527.20000K562CSTF2T
chr8144892568144892645-intron-Distal,intron-Proximal4.556758.30573K562AQR
chr8144875818144875886-intron-Distal,intron-Proximal4.336054.24431HepG2RBFOX2
chr8144889646144889706-intron-Distal,intron-Proximal5.7278412.15317HepG2PRPF8
chr8144875992144876045-intron-Distal,intron-Proximal3.547204.31340HepG2RBM22
chr8144877416144877421-intron-Distal,intron-Proximal5.208595.69951K562AQR
chr8144883483144883536-intron-Distal3.990773.63454HepG2SUGP2
chr8144894199144894273-intron-Distal3.931386.91279K562RBFOX2
chr8144873674144873807-intron-Distal,intron-Proximal4.107797.30362HepG2HNRNPK
chr8144886723144886738-intron-Distal,intron-Proximal4.5498516.99417K562AQR
chr8144887885144887930-intron-Distal4.787887.37772HepG2EFTUD2
chr8144893665144893723-intron-Distal3.508365.89182K562EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SCRIB is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SCRIB is not available on ENCORE database.

  • 111 RBPs can affect the levels of SCRIB.  








The Knockdown/knockout RNA-Seq assay for SCRIB is not available on ENCORE database.





111 RBPs can affect the gene expression of SCRIB :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SCRIBENSG00000180900.121852.042601156.216900.679607.722006.25920HepG2ABCF1
SCRIBENSG00000180900.121678.262401330.007900.335405.007104.23590HepG2ACO1
SCRIBENSG00000180900.121188.00010733.242100.696101.880201.43190HepG2AKAP1
SCRIBENSG00000180900.121410.00220690.136901.030606.654305.77320HepG2BOP1
SCRIBENSG00000180900.12318.52570503.00970-0.659202.565801.82190HepG2CALR
SCRIBENSG00000180900.12325.12910216.769800.584703.802502.60480HepG2YBX3
SCRIBENSG00000180900.12503.99390358.820500.490003.814903.08200HepG2CELF1
SCRIBENSG00000180900.12514.46970385.882000.414803.202202.41440HepG2DAZAP1
SCRIBENSG00000180900.121253.91700702.178400.836403.515302.81980HepG2DDX3X
SCRIBENSG00000180900.12401.06860212.826900.914108.812407.61070HepG2DNAJC21
SCRIBENSG00000180900.12476.15190210.983601.174206.197905.27840HepG2DNAJC2
SCRIBENSG00000180900.12145.45520354.59680-1.285602.510201.46230HepG2AGO1
SCRIBENSG00000180900.121218.91150877.051500.474805.109403.54960HepG2EIF2S2
SCRIBENSG00000180900.12631.95870364.641200.793307.405406.09990HepG2EIF4G2
SCRIBENSG00000180900.122412.110601841.408000.389401.846801.33480HepG2ETF1
SCRIBENSG00000180900.12393.78520638.77910-0.697906.762605.56530HepG2FUBP3
SCRIBENSG00000180900.121565.77620647.016801.274909.692008.46690HepG2FXR1
SCRIBENSG00000180900.12485.73100290.993500.739103.272702.05520HepG2GRSF1
SCRIBENSG00000180900.12640.54300266.162401.266908.318405.86410HepG2HNRNPA0
SCRIBENSG00000180900.12518.17350259.867000.995606.249404.08300HepG2HNRNPAB
SCRIBENSG00000180900.12971.34460659.240200.559108.099906.95340HepG2HNRNPF
SCRIBENSG00000180900.121541.96990608.264301.3419011.5566010.22270HepG2HNRNPK
SCRIBENSG00000180900.12718.08680351.527701.030409.363408.19430HepG2HNRNPL
SCRIBENSG00000180900.12604.37410237.429901.3478015.0848013.75960HepG2HNRNPU
SCRIBENSG00000180900.121024.65550649.165000.658402.059501.42860HepG2IGF2BP1
SCRIBENSG00000180900.121083.83640609.569700.830203.491902.74230HepG2IGF2BP2
SCRIBENSG00000180900.12351.72620242.524700.536204.033303.16520HepG2ILF2
SCRIBENSG00000180900.12697.34490299.871701.217407.479105.43100HepG2KHDRBS1
SCRIBENSG00000180900.121552.63460950.060200.708502.921602.06780HepG2LARP4
SCRIBENSG00000180900.12586.37250306.917800.933902.554001.46510HepG2LARP7
SCRIBENSG00000180900.121400.48600647.245901.113407.482606.41880HepG2MAGOH
SCRIBENSG00000180900.122505.32780650.750501.9447031.8968029.93900HepG2MATR3
SCRIBENSG00000180900.12499.39680793.39990-0.667907.190905.26180HepG2NAA15
SCRIBENSG00000180900.121563.93360665.983401.231504.007503.25010HepG2NCBP2
SCRIBENSG00000180900.12745.08430382.636500.961304.458903.49220HepG2NOL12
SCRIBENSG00000180900.12659.65940267.811701.300405.916103.84730HepG2NOLC1
SCRIBENSG00000180900.121229.91520434.820601.500007.382505.58500HepG2NONO
SCRIBENSG00000180900.12792.64290636.094300.317301.917701.39700HepG2PCBP1
SCRIBENSG00000180900.12608.88570211.766401.5236030.2802028.06760HepG2PPIL4
SCRIBENSG00000180900.12464.46810762.36040-0.7149010.572809.20280HepG2PRPF4
SCRIBENSG00000180900.121169.74260647.321600.8535016.5906015.46740HepG2PTBP1
SCRIBENSG00000180900.121060.26840365.242801.5374033.4169031.63190HepG2PUF60
SCRIBENSG00000180900.121278.01200387.701301.7208022.5315021.17430HepG2PUM1
SCRIBENSG00000180900.12798.85470387.430601.043901.871901.31440HepG2PUM2
SCRIBENSG00000180900.121065.16690370.141401.524809.388407.54330HepG2RBM27
SCRIBENSG00000180900.12673.93350300.575801.164802.746301.68920HepG2RCC2
SCRIBENSG00000180900.121673.27160720.347101.2158033.3301031.90000HepG2NELFE
SCRIBENSG00000180900.121260.96950671.013800.910003.924803.20770HepG2RECQL
SCRIBENSG00000180900.121161.88340710.139200.710202.301601.67030HepG2RPLP0
SCRIBENSG00000180900.12912.33180371.774201.295005.240804.42500HepG2RPS19
SCRIBENSG00000180900.121238.17330341.284001.8591015.2533013.48700HepG2RPS2
SCRIBENSG00000180900.12829.63180315.974001.3926016.3395014.46270HepG2RPS3A
SCRIBENSG00000180900.12797.38580348.467901.194204.269502.92040HepG2RPS5
SCRIBENSG00000180900.12600.35240211.434701.505507.068006.10550HepG2SAFB2
SCRIBENSG00000180900.12779.57000297.533201.389505.747703.85970HepG2SART3
SCRIBENSG00000180900.121906.898901104.099900.788307.449606.30670HepG2SF3A3
SCRIBENSG00000180900.121251.95400673.816400.8937015.5995014.37090HepG2SF3B4
SCRIBENSG00000180900.12742.65040350.169701.0845022.1136020.50680HepG2SLBP
SCRIBENSG00000180900.12575.05180246.556801.2217022.6726021.11160HepG2SMN1
SCRIBENSG00000180900.12765.29630302.561101.338705.592804.19600HepG2SMNDC1
SCRIBENSG00000180900.121469.24800360.600002.0265067.2258064.75910HepG2SRSF5
SCRIBENSG00000180900.12899.42720647.676200.473602.148201.52630HepG2SRSF7
SCRIBENSG00000180900.12690.97050275.002401.329109.689407.50740HepG2STIP1
SCRIBENSG00000180900.121467.47460410.122201.8391085.1975082.72890HepG2SUCLG1
SCRIBENSG00000180900.12261.97750632.36340-1.271307.468606.62250HepG2TAF15
SCRIBENSG00000180900.121100.31390230.662702.254007.433406.68580HepG2TIAL1
SCRIBENSG00000180900.12673.92460232.772701.5336025.5961024.09800HepG2TRIM56
SCRIBENSG00000180900.121034.54500356.794001.535708.035606.42150HepG2TUFM
SCRIBENSG00000180900.121397.00350377.639201.887204.275703.22290HepG2UBE2L3
SCRIBENSG00000180900.121262.07530945.344800.416801.959101.43720HepG2UTP3
SCRIBENSG00000180900.12639.11660283.041401.1750010.444708.36060HepG2XPO5
SCRIBENSG00000180900.12929.76190752.331300.305403.194702.48220HepG2ZC3H8
SCRIBENSG00000180900.123296.229002058.383700.6792014.2226013.03930K562AGGF1
SCRIBENSG00000180900.122909.601902262.024100.363102.194601.33050K562AKAP8
SCRIBENSG00000180900.123197.103902141.883800.577803.438502.70850K562AKAP8L
SCRIBENSG00000180900.121574.801202468.04160-0.648208.103207.18630K562AQR
SCRIBENSG00000180900.122918.206102247.431500.376703.104702.13330K562ATP5C1
SCRIBENSG00000180900.121439.53890674.252301.0941023.3845020.74740K562BCLAF1
SCRIBENSG00000180900.122366.507801778.372400.412102.814701.69800K562CPEB4
SCRIBENSG00000180900.121280.16950511.521201.323405.180103.67020K562CSTF2
SCRIBENSG00000180900.122236.208401636.412100.450402.608801.43590K562DDX21
SCRIBENSG00000180900.121706.442301397.496800.288002.500101.51150K562DDX3X
SCRIBENSG00000180900.122337.051701839.583000.345202.890502.22420K562DDX47
SCRIBENSG00000180900.12509.65540312.836800.704006.435505.23700K562EIF3G
SCRIBENSG00000180900.12918.668501460.02760-0.668403.089602.22410K562EIF4A3
SCRIBENSG00000180900.121701.085701314.823000.371504.576903.02620K562EIF4B
SCRIBENSG00000180900.121510.578801152.761700.389902.577301.35920K562EXOSC5
SCRIBENSG00000180900.12199.48720614.58860-1.623304.021002.63070K562FKBP4
SCRIBENSG00000180900.12396.93300549.07270-0.468103.002302.10960K562FMR1
SCRIBENSG00000180900.1228.98610178.26110-2.6206015.1031013.15050K562G3BP2
SCRIBENSG00000180900.121270.36060450.210401.496506.086104.31050K562IGF2BP2
SCRIBENSG00000180900.12868.42300457.742800.923805.491403.70910K562IGF2BP3
SCRIBENSG00000180900.12222.28500439.93630-0.984906.914405.36900K562KRR1
SCRIBENSG00000180900.121079.81230472.702901.191709.851308.20290K562MAGOH
SCRIBENSG00000180900.122655.256402175.869600.287203.042601.90510K562MAK16
SCRIBENSG00000180900.12923.65890471.675400.969503.312902.29250K562MATR3
SCRIBENSG00000180900.121274.477201784.76530-0.485802.280301.49850K562NAA15
SCRIBENSG00000180900.12899.772201457.94110-0.696307.717405.69410K562NCBP2
SCRIBENSG00000180900.121083.67930696.144300.638403.029501.51780K562NUSAP1
SCRIBENSG00000180900.12886.960701301.24490-0.553003.363101.98240K562PABPC1
SCRIBENSG00000180900.122010.971201395.065200.527502.345801.44910K562PABPN1
SCRIBENSG00000180900.121091.09330459.294201.2482016.7715015.20220K562PTBP1
SCRIBENSG00000180900.121888.520803190.91940-0.756705.961304.34020K562PUM1
SCRIBENSG00000180900.12298.35700199.363400.581503.508301.46060K562QKI
SCRIBENSG00000180900.122951.267002069.630900.511908.454007.44290K562RBM15
SCRIBENSG00000180900.12844.06750578.491300.545002.255801.36530K562RCC2
SCRIBENSG00000180900.12795.55230463.257800.780002.390401.38930K562NELFE
SCRIBENSG00000180900.12736.671501208.01910-0.713504.846302.70520K562RPS3A
SCRIBENSG00000180900.12954.12990505.307900.916906.913705.24110K562RPS3
SCRIBENSG00000180900.121568.745502136.13810-0.445405.662704.52620K562SF3A3
SCRIBENSG00000180900.12346.31040490.00260-0.500702.599401.65770K562SF3B1
SCRIBENSG00000180900.12310.40490185.249200.744605.450904.22340K562SF3B4
SCRIBENSG00000180900.12153.09310287.27190-0.908003.142501.43570K562SND1
SCRIBENSG00000180900.12887.28880548.345800.694203.384402.22160K562SRFBP1
SCRIBENSG00000180900.12954.90860450.312001.084308.987807.72220K562SRSF1
SCRIBENSG00000180900.121109.78500487.698001.1861021.4914018.39950K562SRSF4
SCRIBENSG00000180900.121109.05410425.410901.3823015.6886013.06270K562SRSF5
SCRIBENSG00000180900.1270.81560174.97500-1.305004.295902.32420K562TAF15
SCRIBENSG00000180900.121147.31820455.636101.3322010.710609.16540K562TARDBP
SCRIBENSG00000180900.121378.94770439.541101.6494028.1353025.30930K562TIA1
SCRIBENSG00000180900.121094.08490431.578601.3419012.473009.59610K562TRA2A
SCRIBENSG00000180900.121088.70110647.827700.748802.708701.77420K562TRIM56
SCRIBENSG00000180900.1272.74600178.36940-1.293908.310906.90110K562U2AF2
SCRIBENSG00000180900.122168.973003382.14140-0.640903.306001.75760K562UBE2L3
SCRIBENSG00000180900.121986.072102295.20470-0.208702.349201.68440K562UPF1
SCRIBENSG00000180900.121605.537002042.36990-0.347203.904402.91050K562WDR43
SCRIBENSG00000180900.121266.55010558.602901.180903.647802.19060K562XRN2
SCRIBENSG00000180900.12866.606101724.65060-0.992903.098001.39560K562YTHDC2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SCRIB is not available on ENCORE database.





25 RBPs can affect the splicing of SCRIB :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESCRIBENSG00000180900.12chr8-1448897211448897841448890931448891831448907781448911950.274000.000000.00002includedHepG2G3BP1
SESCRIBENSG00000180900.12chr8-144889721144889784144889093144889183144890778144891195-0.250000.000000.00000excludedK562SRSF1
SESCRIBENSG00000180900.12chr8-144873835144873910144873558144873610144874045144874083-0.371000.000000.00044excludedK562PRPF8
SESCRIBENSG00000180900.12chr8-1448897211448897841448890931448891831448907781448911950.157000.000030.00359includedHepG2RBM22
SESCRIBENSG00000180900.12chr8-144873835144873910144873558144873610144874045144874284-0.225000.000350.02708excludedHepG2RBM22
SESCRIBENSG00000180900.12chr8-1448754261448755101448751451448752531448760691448761320.070000.004570.07062includedHepG2U2AF1
SESCRIBENSG00000180900.12chr8-144889721144889784144889093144889183144890778144891195-0.235000.000030.00106excludedHepG2U2AF1
SESCRIBENSG00000180900.12chr8-144889721144889784144889093144889183144890778144891195-0.164000.000000.00000excludedK562AKAP8L
SESCRIBENSG00000180900.12chr8-144873835144873910144873558144873610144874045144874083-0.296000.000010.00654excludedK562PCBP1
SESCRIBENSG00000180900.12chr8-1448897211448897841448890931448891831448907781448911950.293000.000000.00000includedHepG2QKI
SESCRIBENSG00000180900.12chr8-144889721144889784144889093144889183144890778144891195-0.153000.006900.06836excludedHepG2U2AF2
SESCRIBENSG00000180900.12chr8-1448897211448897841448890931448891831448907781448911950.255000.000000.00000includedHepG2AKAP1
SESCRIBENSG00000180900.12chr8-144874045144874083144873558144873610144874160144874303-0.121000.000520.00702excludedK562AQR
SESCRIBENSG00000180900.12chr8-144873835144873910144873558144873610144874045144874083-0.145000.000260.01352excludedK562FXR1
SESCRIBENSG00000180900.12chr8-1448897211448897841448890931448891831448907781448911950.232000.000000.00001includedHepG2DDX3X
SESCRIBENSG00000180900.12chr8-144889721144889784144889093144889183144890778144891195-0.097000.000040.00102excludedK562PUS1
SESCRIBENSG00000180900.12chr8-1448897211448897841448890931448891831448907781448911950.197000.000010.00183includedHepG2NCBP2
SESCRIBENSG00000180900.12chr8-1448897211448897841448890931448891831448907781448911950.181000.000060.00542includedHepG2PTBP1
SESCRIBENSG00000180900.12chr8-144873835144873910144873558144873610144874045144874083-0.340000.000440.02788excludedK562EFTUD2
SESCRIBENSG00000180900.12chr8-1448738351448739101448735581448736101448740451448740830.262000.001260.05061includedHepG2MATR3
SESCRIBENSG00000180900.12chr8-144889721144889784144889093144889183144890778144891195-0.218000.000020.00582excludedHepG2LARP4
SESCRIBENSG00000180900.12chr8-1448738351448739101448735581448736101448740451448740830.363000.000150.00539includedHepG2SRSF1
SESCRIBENSG00000180900.12chr8-1448897211448897841448890931448891831448907781448911950.310000.000000.00000includedHepG2IGF2BP3
SESCRIBENSG00000180900.12chr8-144873835144873910144873558144873610144874045144874083-0.632000.000810.05773excludedHepG2TIAL1
SESCRIBENSG00000180900.12chr8-144889721144889784144889093144889183144890778144891195-0.213000.000140.00976excludedHepG2PCBP1
SESCRIBENSG00000180900.12chr8-144873835144873910144873558144873610144874045144874083-0.282000.000750.03849excludedHepG2PCBP1
SESCRIBENSG00000180900.12chr8-144889721144889784144889093144889183144890778144891195-0.076000.001070.02930excludedK562AGGF1
SESCRIBENSG00000180900.12chr8-144873835144873910144873558144873610144874045144874083-0.814000.000000.00047excludedHepG2HNRNPC
SESCRIBENSG00000180900.12chr8-144889721144889784144889093144889183144890778144891195-0.235000.000010.00186excludedHepG2SRSF9
SESCRIBENSG00000180900.12chr8-1448738351448739101448735581448736101448740451448740830.368000.000410.02007includedK562PTBP1
SESCRIBENSG00000180900.12chr8-144873835144873910144873558144873610144874045144874083-0.330000.001540.02740excludedK562HNRNPC
A3SSSCRIBENSG00000180900.12chr8-1448961701448963921448961701448962881448973831448975490.200000.000000.00000longerK562AQR
A3SSSCRIBENSG00000180900.12chr8-1448956391448957151448956391448956961448958061448958960.074000.000140.00114longerK562AQR
RISCRIBENSG00000180900.12chr8-1448746541448750371448746541448748051448748771448750370.127000.000120.00211includedHepG2RBM22
RISCRIBENSG00000180900.12chr8-1448746541448750371448746541448748051448748771448750370.066000.000360.04415includedK562PUM1
RISCRIBENSG00000180900.12chr8-1448954801448957151448954801448955441448956391448957150.081000.000000.00000includedK562AQR
RISCRIBENSG00000180900.12chr8-1448746541448750371448746541448748051448748771448750370.297000.000000.00000includedK562AQR
RISCRIBENSG00000180900.12chr8-1448774461448776631448774461448775031448775891448776630.129000.000000.00000includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SCRIB is not avaliable on ENCORE database.