OSTM1

General Information

Gene Name       : OSTM1
Gene ID             : ENSG00000081087.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: OSTM1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878OSTM1ENSG00000081087.145.473.574.52ENCSR000AEF
HepG2OSTM1ENSG00000081087.147.0811.509.29ENCSR985KAT
K562OSTM1ENSG00000081087.147.186.796.98ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for OSTM1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • OSTM1 RNA is bound by 3 proteins.  







eCLIP assay for OSTM1 is not avaliable on ENCORE database.





3 proteins are bound to OSTM1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr6108363826108363929-3'-UTR,intron-Distal4.391493.45012HepG2UPF1
chr6108365527108365707-3'-UTR,intron-Distal,intron-Proximal3.297303.24595HepG2QKI
chr6108365577108365690-3'-UTR,intron-Distal,intron-Proximal4.3646510.17421K562QKI
chr6108395823108395919-5'-UTR,CDS,intron-Distal4.3977518.59875HepG2DDX3X
chr6108395743108395823-CDS,intron-Distal4.9461813.15062HepG2DDX3X
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for OSTM1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for OSTM1 is not available on ENCORE database.

  • 121 RBPs can affect the levels of OSTM1.  








The Knockdown/knockout RNA-Seq assay for OSTM1 is not available on ENCORE database.





121 RBPs can affect the gene expression of OSTM1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
OSTM1ENSG00000081087.10361.50170253.317300.513002.715601.65460HepG2AATF
OSTM1ENSG00000081087.10771.22470376.095901.0360021.2252019.89340HepG2ACO1
OSTM1ENSG00000081087.102729.01750673.519802.0185048.8721047.06280HepG2AKAP1
OSTM1ENSG00000081087.10635.04440377.915400.7487010.033908.68550HepG2AKAP8L
OSTM1ENSG00000081087.10883.03340557.263400.664004.075803.13090HepG2ASCC1
OSTM1ENSG00000081087.101051.04120646.582500.7008012.4332011.16250HepG2AUH
OSTM1ENSG00000081087.10647.07870449.307700.526103.465002.46270HepG2BCLAF1
OSTM1ENSG00000081087.101392.32180732.067500.927308.797707.80310HepG2BOP1
OSTM1ENSG00000081087.101029.27960529.444300.9590012.2298010.72530HepG2CIRBP
OSTM1ENSG00000081087.10715.01720370.805800.947204.113803.17460HepG2CNOT7
OSTM1ENSG00000081087.101003.50210538.581400.8977011.5110010.37550HepG2CELF1
OSTM1ENSG00000081087.10436.64590279.678900.642604.489103.64750HepG2DDX21
OSTM1ENSG00000081087.10474.57660273.527300.794907.066005.61780HepG2DDX24
OSTM1ENSG00000081087.101218.96360645.143100.9179011.1818010.00310HepG2DDX3X
OSTM1ENSG00000081087.10243.34000400.76400-0.719805.081003.74390HepG2DDX5
OSTM1ENSG00000081087.10731.90700554.280600.400902.103601.55850HepG2DDX6
OSTM1ENSG00000081087.10260.48890400.62090-0.621004.287403.07890HepG2DHX30
OSTM1ENSG00000081087.10253.98330359.83820-0.502603.240702.51750HepG2DKC1
OSTM1ENSG00000081087.10533.43700415.378500.360802.478901.80940HepG2DNAJC21
OSTM1ENSG00000081087.10295.43920411.66210-0.478603.909303.16160HepG2DNAJC2
OSTM1ENSG00000081087.10432.26750278.330200.635004.088402.73760HepG2EFTUD2
OSTM1ENSG00000081087.10499.11420257.408200.955207.365005.59580HepG2AGO1
OSTM1ENSG00000081087.10587.24340271.043101.1153011.7185010.00270HepG2EIF3D
OSTM1ENSG00000081087.10911.63780573.277300.669104.429903.57030HepG2EIF4B
OSTM1ENSG00000081087.101485.57070742.305801.0008027.9092026.33310HepG2ETF1
OSTM1ENSG00000081087.101240.07540481.464601.3648020.6168018.86430HepG2FIP1L1
OSTM1ENSG00000081087.1080.68980277.42840-1.7817017.3848015.50260HepG2FUBP3
OSTM1ENSG00000081087.10922.02780551.062600.742506.968805.93240HepG2G3BP1
OSTM1ENSG00000081087.10368.13680585.11280-0.668505.174703.94290HepG2G3BP2
OSTM1ENSG00000081087.10349.72350241.321400.535202.616201.74780HepG2GEMIN5
OSTM1ENSG00000081087.10160.99730762.02060-2.242808.313607.24740HepG2GPKOW
OSTM1ENSG00000081087.10544.82710362.155700.589102.954501.32410HepG2GTF2F1
OSTM1ENSG00000081087.10486.11820359.102200.436803.649002.53900HepG2HDGF
OSTM1ENSG00000081087.10754.01060368.237701.033807.195004.87970HepG2HLTF
OSTM1ENSG00000081087.10680.36940532.196200.354302.998402.03070HepG2HNRNPA2B1
OSTM1ENSG00000081087.10595.89960466.441500.353301.929601.33880HepG2HNRNPC
OSTM1ENSG00000081087.10376.69930629.89550-0.741704.247603.38030HepG2HNRNPF
OSTM1ENSG00000081087.10312.13350620.28000-0.990806.547205.47580HepG2IGF2BP1
OSTM1ENSG00000081087.101174.19250560.118801.0678015.2826013.84590HepG2IGF2BP2
OSTM1ENSG00000081087.10309.51100563.42920-0.864206.123604.57630HepG2KHSRP
OSTM1ENSG00000081087.101583.54350739.692401.0981013.6273011.82070HepG2LARP4
OSTM1ENSG00000081087.10493.45030331.659500.573104.240102.82960HepG2LARP7
OSTM1ENSG00000081087.101288.60830597.630501.1084014.5029013.14120HepG2MATR3
OSTM1ENSG00000081087.10729.12930389.849500.9032011.7740010.22230HepG2MSI2
OSTM1ENSG00000081087.10862.46690611.690900.495603.371902.67530HepG2NCBP2
OSTM1ENSG00000081087.10819.49550574.198800.513105.593604.51560HepG2NOL12
OSTM1ENSG00000081087.10194.42760544.67170-1.4862018.5556016.73620HepG2PABPC4
OSTM1ENSG00000081087.10379.31390478.37530-0.334802.162501.61500HepG2PCBP1
OSTM1ENSG00000081087.10701.46190363.874600.946807.415405.79570HepG2PCBP2
OSTM1ENSG00000081087.10326.28050413.28190-0.341001.997501.36310HepG2PPIL4
OSTM1ENSG00000081087.10329.37960243.205900.437502.606701.85420HepG2PRPF4
OSTM1ENSG00000081087.10850.72270392.232601.1169014.1730012.54870HepG2PRPF8
OSTM1ENSG00000081087.10755.54030486.766800.634208.501507.65190HepG2PTBP1
OSTM1ENSG00000081087.101166.08120548.135601.0890013.6874012.49970HepG2PUF60
OSTM1ENSG00000081087.10967.31030581.884900.7331015.3299014.16590HepG2PUM1
OSTM1ENSG00000081087.10769.00730581.450700.403203.396702.65580HepG2PUM2
OSTM1ENSG00000081087.10570.91840383.087300.575506.356705.49170HepG2PUS1
OSTM1ENSG00000081087.10567.52000351.185200.692302.807302.09760HepG2RAVER1
OSTM1ENSG00000081087.101682.27190620.442301.4389050.2532048.58130HepG2RBM22
OSTM1ENSG00000081087.10774.03440478.447900.693907.625506.55430HepG2RBM25
OSTM1ENSG00000081087.10275.89880504.54430-0.8708010.100109.03660HepG2RECQL
OSTM1ENSG00000081087.10693.26000344.901901.007107.961906.43370HepG2RPS10
OSTM1ENSG00000081087.10634.29210376.495600.752405.927304.34640HepG2RPS5
OSTM1ENSG00000081087.10770.42710388.006400.9895010.152308.78490HepG2RRP9
OSTM1ENSG00000081087.10571.56620381.978200.581302.884201.32790HepG2RTF1
OSTM1ENSG00000081087.10246.42940412.65100-0.743707.450306.46750HepG2SAFB2
OSTM1ENSG00000081087.10412.80310264.686200.641102.432901.54890HepG2SERBP1
OSTM1ENSG00000081087.10639.34700506.783500.335102.449501.88840HepG2SF3B4
OSTM1ENSG00000081087.10659.43970481.236800.454404.880404.06530HepG2SMN1
OSTM1ENSG00000081087.10601.03280357.873100.747905.155303.82140HepG2SMNDC1
OSTM1ENSG00000081087.102311.93190800.937601.529206.926705.68370HepG2SNRNP70
OSTM1ENSG00000081087.101437.13810700.787901.0360032.1124030.89550HepG2SRFBP1
OSTM1ENSG00000081087.10639.51130528.973700.273701.799201.39420HepG2SRSF1
OSTM1ENSG00000081087.101003.17040541.221800.8902018.5936017.17350HepG2SRSF5
OSTM1ENSG00000081087.10752.50320430.349500.8061013.4999012.44470HepG2SRSF9
OSTM1ENSG00000081087.10396.35500608.48680-0.618406.376805.65680HepG2SSB
OSTM1ENSG00000081087.10136.13640321.75440-1.240908.315806.31520HepG2STAU1
OSTM1ENSG00000081087.10656.53000328.180701.000307.439105.53030HepG2SUB1
OSTM1ENSG00000081087.10543.81190325.265400.741407.820606.29520HepG2SUPT6H
OSTM1ENSG00000081087.10887.68010506.086600.810607.595106.56560HepG2SUPV3L1
OSTM1ENSG00000081087.10766.29560475.466200.688508.794607.88610HepG2TAF15
OSTM1ENSG00000081087.10188.97720708.47930-1.906506.989405.90900HepG2TARDBP
OSTM1ENSG00000081087.10354.65540450.30010-0.344501.955701.52010HepG2TIAL1
OSTM1ENSG00000081087.10712.86250535.529400.412603.185402.24230HepG2TUFM
OSTM1ENSG00000081087.101146.87940411.966201.477007.682906.64040HepG2U2AF1
OSTM1ENSG00000081087.10904.85840566.865300.674604.861303.73340HepG2UBE2L3
OSTM1ENSG00000081087.10675.97880390.601100.7912012.1585010.88400HepG2UPF1
OSTM1ENSG00000081087.10257.25000463.47640-0.849304.331303.05920HepG2UPF2
OSTM1ENSG00000081087.10558.94190401.476300.477304.151702.90050HepG2UTP18
OSTM1ENSG00000081087.10556.27800377.108600.560705.573404.77160HepG2UTP3
OSTM1ENSG00000081087.10531.66200345.272800.622703.157101.80330HepG2XRCC5
OSTM1ENSG00000081087.10700.20770386.174100.858406.465504.89360HepG2XRCC6
OSTM1ENSG00000081087.1095.95590498.18610-2.3762034.8348032.45140HepG2XRN2
OSTM1ENSG00000081087.10536.63640350.796600.613203.587402.09590HepG2ZRANB2
OSTM1ENSG00000081087.10451.01050324.872600.473202.800701.61200K562AARS
OSTM1ENSG00000081087.10323.07610434.76960-0.428403.041602.45070K562AGGF1
OSTM1ENSG00000081087.10354.84690452.38280-0.350301.956301.40430K562AKAP8L
OSTM1ENSG00000081087.101538.09790756.987801.0227016.5108015.23630K562AQR
OSTM1ENSG00000081087.10340.00900474.63050-0.481203.807302.72160K562ATP5C1
OSTM1ENSG00000081087.101176.59400527.199801.1581018.2567016.00380K562BOP1
OSTM1ENSG00000081087.10778.64110519.621500.583405.700903.97970K562CCDC124
OSTM1ENSG00000081087.10673.02440487.464100.465303.402801.97220K562CIRBP
OSTM1ENSG00000081087.10697.38740560.538800.315001.996201.32160K562CPSF6
OSTM1ENSG00000081087.101161.77230939.541300.306202.246901.36730K562CELF1
OSTM1ENSG00000081087.10979.53780646.460200.599409.000607.90870K562DDX47
OSTM1ENSG00000081087.10440.46130332.919100.403702.212001.39590K562EFTUD2
OSTM1ENSG00000081087.10640.79790511.485900.325102.361901.68890K562EIF2S2
OSTM1ENSG00000081087.10290.75860181.175500.682302.436201.49710K562EIF3A
OSTM1ENSG00000081087.10486.37450356.540600.447902.316401.37870K562EIF3D
OSTM1ENSG00000081087.10492.93110308.542900.675804.816703.25970K562FKBP4
OSTM1ENSG00000081087.10894.62840570.385100.649306.407305.08670K562FMR1
OSTM1ENSG00000081087.10652.80110483.474500.433102.276801.45240K562FTO
OSTM1ENSG00000081087.10168.53990303.66870-0.849407.063704.08420K562FUBP3
OSTM1ENSG00000081087.10643.33240334.749000.9424013.6143012.37470K562FXR1
OSTM1ENSG00000081087.10599.69990355.586200.753907.391706.46230K562HNRNPC
OSTM1ENSG00000081087.10322.49060462.52080-0.520303.662202.25200K562IGF2BP3
OSTM1ENSG00000081087.10846.19610457.010700.888707.705506.05660K562KRR1
OSTM1ENSG00000081087.10283.88040414.18620-0.545004.372203.37570K562MTPAP
OSTM1ENSG00000081087.101092.47750690.414800.662003.195301.85320K562PABPC1
OSTM1ENSG00000081087.10330.01440467.16390-0.501403.639902.08570K562PCBP1
OSTM1ENSG00000081087.10576.58050376.665100.614102.177201.43940K562PCBP3
OSTM1ENSG00000081087.10443.12310288.922700.616904.853303.79100K562POLR2G
OSTM1ENSG00000081087.10565.65850744.13180-0.395602.103201.39170K562PPIG
OSTM1ENSG00000081087.10673.55950323.966401.0559012.1536010.57420K562PRPF8
OSTM1ENSG00000081087.10143.35360318.80680-1.153109.337607.46270K562PSIP1
OSTM1ENSG00000081087.10642.85600464.392400.469103.938403.15910K562PTBP1
OSTM1ENSG00000081087.101557.01460834.029400.9005015.7484013.77110K562PUF60
OSTM1ENSG00000081087.101222.57210886.830900.463103.044601.92210K562PUM1
OSTM1ENSG00000081087.10489.72570330.058000.569203.483202.56370K562RPS19
OSTM1ENSG00000081087.10760.51250509.027700.579104.078802.88430K562SF3B1
OSTM1ENSG00000081087.10591.03010465.211200.345202.673001.75000K562SRPK2
OSTM1ENSG00000081087.10306.94930429.89520-0.486002.621601.60480K562SRSF5
OSTM1ENSG00000081087.10492.26740786.77400-0.676503.608102.14610K562STAU1
OSTM1ENSG00000081087.10436.69260313.780000.476802.597601.61570K562SUPV3L1
OSTM1ENSG00000081087.10291.37550436.05090-0.581603.786602.47560K562TRA2A
OSTM1ENSG00000081087.10560.26150767.04890-0.453203.197301.68180K562TRIP6
OSTM1ENSG00000081087.10615.78120434.186900.504002.618001.79380K562WDR43
OSTM1ENSG00000081087.10209.94580338.02460-0.687103.965402.41480K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for OSTM1 is not available on ENCORE database.





1 RBPs can affect the splicing of OSTM1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSOSTM1ENSG00000081087.10chr6-1083704561083706991083704561083706221083722341083724020.131000.000000.00000longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for OSTM1 is not avaliable on ENCORE database.