NR3C1

General Information

Gene Name       : NR3C1
Gene ID             : ENSG00000113580.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: NR3C1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NR3C1ENSG00000113580.1465.8456.9861.41ENCSR000AEF
HepG2NR3C1ENSG00000113580.146.4613.259.86ENCSR985KAT
K562NR3C1ENSG00000113580.1411.9511.7511.85ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
NR3C1Ribo-STAMP-293TshRNABGRSLV04-25,BGRSLV04-26BGRSLV04-1,BGRSLV04-2NotSatisfiedENCORE2
NR3C1Ribo-STAMP-293TshRNANR3C1-BGRSLV06-11,NR3C1-BGRSLV06-12NT-BGRSLV06-1,NT-BGRSLV06-2,SubmittedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NR3C1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NR3C1 RNA is bound by 21 proteins.  







eCLIP assay for NR3C1 is not avaliable on ENCORE database.





21 proteins are bound to NR3C1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5142659719142659784-3'-UTR,intron-Distal3.893534.01064HepG2FUBP3
chr5142660063142660092-3'-UTR,intron-Distal4.608797.87748K562PUM2
chr5142661279142661345-3'-UTR,intron-Distal,intron-Proximal3.855124.34279HepG2FUBP3
chr5142693658142693733-3'-UTR,CDS,intron-Distal3.235344.11795K562YBX3
chr5142660640142660680-3'-UTR,intron-Distal,intron-Proximal3.9581410.72087K562PUM2
chr5142659791142659841-3'-UTR,intron-Distal5.0525620.93813K562PUM2
chr5142658404142658505-3'-UTR,intron-Distal3.050535.34378K562YBX3
chr5142659841142659883-3'-UTR,intron-Distal3.855316.24385K562PUM2
chr5142657859142657944-3'-UTR,intron-Distal4.059038.73210K562PUM2
chr5142659719142659770-3'-UTR,intron-Distal3.8273213.79051K562PUM2
chr5142660972142661064-3'-UTR,intron-Distal4.4855722.06264K562PUM2
chr5142659708142659757-3'-UTR,intron-Distal3.556914.23488K562FAM120A
chr5142660581142660645-3'-UTR,intron-Distal,intron-Proximal3.978295.53799K562FAM120A
chr5142659284142659328-3'-UTR,intron-Distal3.822188.27513K562PUM2
chr5142782910142783002-5'-UTR,intron-Distal,intron-Proximal4.694924.54356K562DDX3X
chr5142783020142783130-5'-UTR,intron-Distal3.164703.09975K562FTO
chr5142783017142783098-5'-UTR,intron-Distal5.593914.57565HepG2DDX3X
chr5142678267142678393-CDS,intron-Distal,intron-Proximal4.192203.83824K562BUD13
chr5142674986142675047-CDS,intron-Distal,intron-Proximal3.627144.58287K562PRPF8
chr5142779281142779350-CDS,intron-Distal5.165307.49561HepG2BCLAF1
chr5142779462142779563-CDS,intron-Distal,intron-Proximal3.587263.95937K562UCHL5
chr5142779500142779562-CDS,intron-Distal3.613663.66187K562ZNF622
chr5142779317142779380-CDS,intron-Distal4.210313.51664K562RBM15
chr5142780246142780306-CDS,intron-Distal4.013063.59941K562UCHL5
chr5142746656142746715-intron-Distal4.208503.59909K562EXOSC5
chr5142744839142744884-intron-Distal4.053573.01445K562EXOSC5
chr5142744834142744881-intron-Distal3.212093.46325HepG2SUGP2
chr5142745476142745520-intron-Distal3.183803.46325HepG2SUGP2
chr5142759969142760067-intron-Distal3.452553.35377HepG2QKI
chr5142684417142684454-intron-Distal3.507024.31711K562EXOSC5
chr5142746433142746511-intron-Distal4.216973.97018HepG2HNRNPM
chr5142746756142746815-intron-Distal3.546024.61337K562EXOSC5
chr5142745206142745253-intron-Distal4.299503.89085K562EXOSC5
chr5142766144142766195-intron-Distal4.603623.41738HepG2PTBP1
chr5142763266142763363-intron-Distal5.373615.97591K562QKI
chr5142719534142719627-intron-Distal3.901583.26999K562KHSRP
chr5142746838142746883-intron-Distal4.389794.80399K562EXOSC5
chr5142763244142763338-intron-Distal3.670207.41217HepG2QKI
chr5142776123142776199-intron-Distal4.149293.90026K562KHSRP
chr5142743449142743538-intron-Distal3.426553.14999K562EXOSC5
chr5142775562142775612-intron-Distal4.044974.07352K562KHSRP
chr5142743604142743691-intron-Distal4.394493.59909K562EXOSC5
chr5142748051142748123-intron-Distal4.494895.97091K562TARDBP
chr5142730257142730375-intron-Distal3.761575.47669K562PTBP1
chr5142745154142745255-intron-Distal4.921127.39957HepG2SUGP2
chr5142744564142744614-intron-Distal4.258273.89085K562EXOSC5
chr5142745174142745313-intron-Distal4.997945.04680K562HNRNPM
chr5142683751142683791-intron-Distal4.014993.30696K562EXOSC5
chr5142768477142768604-intron-Distal3.187734.15505K562SAFB2
chr5142745606142745640-intron-Distal4.022843.63454HepG2SUGP2
chr5142683846142683886-intron-Distal4.014993.30687K562EXOSC5
chr5142745195142745254-intron-Distal4.058413.62366HepG2HNRNPM
chr5142746040142746080-intron-Distal3.426513.84025HepG2SUGP2
chr5142729547142729644-intron-Distal4.685565.05386K562PTBP1
chr5142782589142782650-intron-Distal3.119863.54602K562TIA1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NR3C1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NR3C1 is not available on ENCORE database.

  • 106 RBPs can affect the levels of NR3C1.  








The Knockdown/knockout RNA-Seq assay for NR3C1 is not available on ENCORE database.





106 RBPs can affect the gene expression of NR3C1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NR3C1ENSG00000113580.10990.14300605.489100.709408.140906.41380HepG2AATF
NR3C1ENSG00000113580.101509.22820830.326100.862007.049705.63700HepG2ABCF1
NR3C1ENSG00000113580.101071.03090712.002700.5889010.166809.15330HepG2ACO1
NR3C1ENSG00000113580.102017.587301542.474600.387302.549302.03710HepG2AKAP1
NR3C1ENSG00000113580.10994.280301669.23330-0.747503.408101.55760HepG2APOBEC3C
NR3C1ENSG00000113580.10417.44050634.73090-0.604603.595602.52960HepG2BCCIP
NR3C1ENSG00000113580.10898.265501212.53060-0.432803.308502.46780HepG2CIRBP
NR3C1ENSG00000113580.10861.09260711.869100.274502.578001.93180HepG2CKAP4
NR3C1ENSG00000113580.10763.718401787.39990-1.2267013.0376011.42710HepG2CNOT7
NR3C1ENSG00000113580.10419.90420656.08490-0.643807.314905.67730HepG2YBX3
NR3C1ENSG00000113580.101051.03960392.101501.4224027.4001024.79650HepG2CSTF2
NR3C1ENSG00000113580.101107.92460668.157800.729509.092907.93680HepG2DDX21
NR3C1ENSG00000113580.10454.26590624.06040-0.458102.267301.56100HepG2DDX55
NR3C1ENSG00000113580.101872.72250955.023100.971407.324005.77360HepG2DDX59
NR3C1ENSG00000113580.101606.461401269.328500.339701.963901.43560HepG2DDX6
NR3C1ENSG00000113580.101383.20520681.199101.0218012.8578011.61650HepG2DKC1
NR3C1ENSG00000113580.10737.083901220.13950-0.727107.602006.65590HepG2EIF2S1
NR3C1ENSG00000113580.101976.133401348.350800.551404.756003.92090HepG2EIF4A3
NR3C1ENSG00000113580.101971.345201312.898100.586303.353602.60010HepG2EIF4B
NR3C1ENSG00000113580.101537.18840856.359900.8439020.4204018.59230HepG2EIF4G1
NR3C1ENSG00000113580.101399.69590820.360500.770709.782808.29500HepG2EIF4G2
NR3C1ENSG00000113580.101852.221201352.644700.453403.523102.85740HepG2ETF1
NR3C1ENSG00000113580.101246.53930838.443100.572004.367203.41660HepG2FIP1L1
NR3C1ENSG00000113580.10942.272501360.57110-0.530004.740003.85090HepG2FXR1
NR3C1ENSG00000113580.10944.158701262.05470-0.418702.898402.21770HepG2G3BP1
NR3C1ENSG00000113580.10714.03620953.37880-0.417102.567901.94830HepG2GPKOW
NR3C1ENSG00000113580.10926.87440679.771600.447204.842603.58610HepG2HDGF
NR3C1ENSG00000113580.10970.45090650.397500.577205.604604.72880HepG2HNRNPA1
NR3C1ENSG00000113580.101109.01580837.936400.404303.890203.04300HepG2IGF2BP1
NR3C1ENSG00000113580.10550.00220734.09170-0.416504.908603.95430HepG2ILF2
NR3C1ENSG00000113580.101275.863601703.31560-0.416902.671301.50630HepG2KHDRBS1
NR3C1ENSG00000113580.10908.69110678.638300.421003.533202.62020HepG2MSI2
NR3C1ENSG00000113580.10639.67780927.83630-0.536502.795301.82360HepG2MTPAP
NR3C1ENSG00000113580.10710.92140860.85020-0.276102.219601.53590HepG2NOL12
NR3C1ENSG00000113580.10922.862801247.47270-0.434803.215002.43840HepG2PABPC4
NR3C1ENSG00000113580.10752.247901195.20010-0.6680012.4648011.32400HepG2PCBP1
NR3C1ENSG00000113580.101490.30360834.258400.836907.051505.46630HepG2PCBP2
NR3C1ENSG00000113580.10933.58530747.145900.321303.190002.36550HepG2PRPF4
NR3C1ENSG00000113580.101247.17290877.057700.507802.800101.57510HepG2PRPF6
NR3C1ENSG00000113580.10939.25090481.477400.9639011.5135010.02890HepG2PRPF8
NR3C1ENSG00000113580.101034.619501216.16990-0.233202.148501.65490HepG2PTBP1
NR3C1ENSG00000113580.101070.65150872.240800.295603.001902.39010HepG2PUM1
NR3C1ENSG00000113580.101597.18470871.633200.8736017.0403015.46580HepG2PUM2
NR3C1ENSG00000113580.101299.44140805.221100.690303.963603.12520HepG2RAVER1
NR3C1ENSG00000113580.101739.13570910.085800.9342019.2891017.38090HepG2RBM15
NR3C1ENSG00000113580.101640.333901353.472800.277203.020702.45970HepG2NELFE
NR3C1ENSG00000113580.102337.46590916.649501.3504025.9665024.32090HepG2RPLP0
NR3C1ENSG00000113580.101355.31060790.712600.777305.924604.57320HepG2RPS10
NR3C1ENSG00000113580.101394.873801794.98890-0.363801.987801.30990HepG2RPS3A
NR3C1ENSG00000113580.10873.22410476.287200.874408.625407.34260HepG2RRP9
NR3C1ENSG00000113580.101410.81460875.690000.687904.686502.68840HepG2RTF1
NR3C1ENSG00000113580.10451.53830640.00210-0.503205.461904.60960HepG2SAFB2
NR3C1ENSG00000113580.101325.04690802.511600.723305.649304.66530HepG2SF3A3
NR3C1ENSG00000113580.101257.57940900.563700.481604.530203.64460HepG2SF3B1
NR3C1ENSG00000113580.10634.56500746.35030-0.234101.855101.31070HepG2SMN1
NR3C1ENSG00000113580.103625.410401277.016201.50530102.30120100.36990HepG2SRFBP1
NR3C1ENSG00000113580.101940.715501321.617700.5542011.8794011.04610HepG2SRSF1
NR3C1ENSG00000113580.101293.18770968.960000.416302.458301.52000HepG2SRSF3
NR3C1ENSG00000113580.101162.74340836.016900.475806.931205.90970HepG2SRSF7
NR3C1ENSG00000113580.101772.939301075.212100.7214019.3489018.13270HepG2SRSF9
NR3C1ENSG00000113580.102064.340401108.847700.8965021.8641020.72300HepG2SSB
NR3C1ENSG00000113580.101149.96460752.459600.611803.766302.35860HepG2SUB1
NR3C1ENSG00000113580.101133.55760922.684300.296802.738802.11980HepG2SUCLG1
NR3C1ENSG00000113580.101607.39490621.261401.3714022.9401021.33430HepG2SUPV3L1
NR3C1ENSG00000113580.10259.03710416.42130-0.684903.691502.56020HepG2TFIP11
NR3C1ENSG00000113580.10492.54500704.55910-0.516506.052905.27600HepG2TRIM56
NR3C1ENSG00000113580.101295.63860717.266200.853009.244608.08750HepG2U2AF1
NR3C1ENSG00000113580.10826.77070568.935100.539103.334802.22830HepG2UPF2
NR3C1ENSG00000113580.101079.09510687.122800.6511011.2191010.14410HepG2UTP3
NR3C1ENSG00000113580.101164.446901607.78540-0.465402.803701.69780HepG2XPO5
NR3C1ENSG00000113580.101015.17510782.739100.375004.975104.29510HepG2ZNF622
NR3C1ENSG00000113580.102476.652301796.310300.463304.741803.12000K562ABCF1
NR3C1ENSG00000113580.101869.307601305.261000.518109.827608.84020K562AGGF1
NR3C1ENSG00000113580.101666.322101122.301100.570105.968504.67620K562BOP1
NR3C1ENSG00000113580.101717.264701251.141600.456803.673601.98540K562BUD13
NR3C1ENSG00000113580.101924.471301559.905300.302902.932001.71270K562CCDC124
NR3C1ENSG00000113580.101883.479101605.267700.230502.428701.39740K562CPEB4
NR3C1ENSG00000113580.10602.86850796.76820-0.402304.120602.48680K562DDX27
NR3C1ENSG00000113580.102048.510901661.223900.302203.940103.18200K562DDX47
NR3C1ENSG00000113580.10929.414801166.15310-0.327403.418102.06060K562EIF2S1
NR3C1ENSG00000113580.10657.52530455.969800.528002.260601.36230K562EIF3A
NR3C1ENSG00000113580.10722.068601033.76730-0.517706.192005.01870K562EIF3G
NR3C1ENSG00000113580.102697.583301924.644700.487009.894908.15520K562EIF4G2
NR3C1ENSG00000113580.101022.956901291.14640-0.335902.586101.76760K562FIP1L1
NR3C1ENSG00000113580.101698.468501214.174000.484204.812903.68320K562FMR1
NR3C1ENSG00000113580.101308.733001029.113800.346702.280601.45520K562FTO
NR3C1ENSG00000113580.101664.514601202.936400.468403.089002.33480K562G3BP2
NR3C1ENSG00000113580.101116.53320828.429500.430503.155001.61690K562GEMIN5
NR3C1ENSG00000113580.101121.008401544.90060-0.462704.869703.86870K562GRSF1
NR3C1ENSG00000113580.10828.852401061.93010-0.357502.183601.35980K562HNRNPM
NR3C1ENSG00000113580.101066.763801505.66910-0.497204.624303.53170K562MAGOH
NR3C1ENSG00000113580.101193.149701502.71280-0.332802.734001.81710K562MATR3
NR3C1ENSG00000113580.101553.577401131.806400.456902.630601.77410K562NAA15
NR3C1ENSG00000113580.101451.716302105.11950-0.536106.053903.79860K562NOL12
NR3C1ENSG00000113580.101472.887701259.762200.225402.745002.00150K562NSUN2
NR3C1ENSG00000113580.10908.954001153.78440-0.344102.142601.40950K562PCBP3
NR3C1ENSG00000113580.10617.52920884.99520-0.519205.273704.16850K562POLR2G
NR3C1ENSG00000113580.101055.846301465.62550-0.473104.444403.36960K562PPIG
NR3C1ENSG00000113580.10503.52560776.96080-0.625804.619703.40620K562PSIP1
NR3C1ENSG00000113580.101090.533901462.80360-0.423703.420902.69130K562PTBP1
NR3C1ENSG00000113580.103018.584002233.363200.434606.834805.09820K562PUM1
NR3C1ENSG00000113580.102431.730001347.034000.8521013.9802012.80560K562PUS1
NR3C1ENSG00000113580.101586.704901312.396200.273702.507301.93810K562RBM15
NR3C1ENSG00000113580.101115.146401476.35770-0.404803.292102.08910K562NELFE
NR3C1ENSG00000113580.10623.85660819.05640-0.392702.164901.44660K562RPS19
NR3C1ENSG00000113580.101712.600101083.535600.660306.625205.08420K562SF3B1
NR3C1ENSG00000113580.10971.647501433.96280-0.561504.642903.73090K562SRSF1
NR3C1ENSG00000113580.10819.155801067.94820-0.382603.136401.99930K562SRSF4
NR3C1ENSG00000113580.101075.297401354.09040-0.332602.497101.50710K562SRSF5
NR3C1ENSG00000113580.10964.508401451.42010-0.589604.599503.68130K562TARDBP
NR3C1ENSG00000113580.101054.786401400.01750-0.408503.463202.53220K562TIA1
NR3C1ENSG00000113580.10561.80580747.32780-0.411702.441001.56500K562TIAL1
NR3C1ENSG00000113580.101065.367101373.46380-0.366502.952501.81720K562TRA2A
NR3C1ENSG00000113580.101480.433701204.320900.297702.687801.89530K562U2AF2
NR3C1ENSG00000113580.101538.006101131.496300.442703.458002.11000K562UTP3
NR3C1ENSG00000113580.101426.125401142.962300.319202.757401.88080K562WDR3
NR3C1ENSG00000113580.101489.207901188.532600.325304.481203.42280K562WDR43
NR3C1ENSG00000113580.101953.817001546.441000.337203.063002.15060K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NR3C1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of NR3C1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for NR3C1 is not avaliable on ENCORE database.