LMNA

General Information

Gene Name       : LMNA
Gene ID             : ENSG00000160789.19
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LMNA)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LMNAENSG00000160789.196.0620.4613.26ENCSR000AEF
HepG2LMNAENSG00000160789.19178.5255.79117.16ENCSR985KAT
K562LMNAENSG00000160789.1975.1651.8463.50ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LMNA is not avaliable on ENCORE database.



Proteins bound to RNA
  • LMNA RNA is bound by 43 proteins.  







eCLIP assay for LMNA is not avaliable on ENCORE database.





43 proteins are bound to LMNA RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1156109562156109598+3'-UTR,CDS4.1471833.07982K562PABPC4
chr1156109698156109760+3'-UTR5.6172425.51613K562PABPC4
chr1156109246156109335+3'-UTR,intron-Distal3.212888.46777HepG2LARP4
chr1156109570156109670+3'-UTR,CDS3.187286.09094K562LSM11
chr1156107503156107586+3'-UTR,CDS,intron-Distal,intron-Proximal4.3518426.86015K562RPS3
chr1156109252156109305+3'-UTR,intron-Distal5.1664523.39108K562PABPC4
chr1156109701156109747+3'-UTR3.756545.10007K562FAM120A
chr1156109584156109645+3'-UTR,CDS3.207077.23772HepG2SUB1
chr1156107527156107616+3'-UTR,CDS,intron-Distal,intron-Proximal3.2845310.00757K562PABPC4
chr1156109120156109183+3'-UTR,intron-Distal4.429558.26371K562PCBP1
chr1156104645156104688+3'-UTR,CDS3.5516717.05563K562GRWD1
chr1156105008156105074+3'-UTR,CDS3.7377915.53870HepG2G3BP1
chr1156104638156104737+3'-UTR,CDS4.0578112.34175HepG2GRWD1
chr1156109582156109668+3'-UTR,CDS3.1302413.03880K562DDX55
chr1156104657156104715+3'-UTR,CDS3.207126.88928K562FXR2
chr1156107522156107621+3'-UTR,CDS,intron-Distal,intron-Proximal3.0368411.04663HepG2LARP4
chr1156104654156104745+3'-UTR,CDS4.6791129.98885HepG2G3BP1
chr1156104594156104614+3'-UTR,CDS,intron-Proximal3.1562818.25647K562ZNF622
chr1156109760156109798+3'-UTR4.8481819.40364K562PABPC4
chr1156104274156104391+3'-UTR,CDS,intron-Proximal5.4835510.68826HepG2AQR
chr1156109451156109535+3'-UTR,intron-Distal,intron-Proximal3.939993.82414HepG2HNRNPK
chr1156109558156109600+3'-UTR,CDS,intron-Proximal4.1787815.67148K562DDX6
chr1156109126156109178+3'-UTR,intron-Distal3.818518.81208HepG2LARP4
chr1156104659156104708+3'-UTR,CDS3.9759516.61760K562RPS3
chr1156109135156109188+3'-UTR,intron-Distal3.010243.20756HepG2UPF1
chr1156104647156104707+3'-UTR,CDS3.417665.80574K562DDX6
chr1156104689156104746+3'-UTR,CDS4.1393324.72170K562ZNF622
chr1156109598156109646+3'-UTR,CDS4.2025535.44396K562PABPC4
chr1156109300156109361+3'-UTR,intron-Distal3.991433.37264K562LSM11
chr1156109566156109635+3'-UTR,CDS3.202263.46130HepG2PRPF4
chr1156104660156104728+3'-UTR,CDS3.271857.98059HepG2RPS3
chr1156104632156104657+3'-UTR,CDS3.7902521.63810K562ZNF622
chr1156109249156109377+3'-UTR,intron-Distal3.0921313.66975K562UPF1
chr1156109686156109754+3'-UTR6.2518216.89355K562UPF1
chr1156104604156104659+3'-UTR,CDS3.4862724.67450K562UCHL5
chr1156104637156104715+3'-UTR,CDS4.1063323.49462K562ZNF800
chr1156104979156105033+3'-UTR,CDS3.585588.40553HepG2RPS3
chr1156109247156109369+3'-UTR,intron-Distal5.0186412.47468HepG2UPF1
chr1156104277156104308+3'-UTR,CDS4.393048.39611HepG2GRWD1
chr1156104230156104288+3'-UTR,CDS3.753127.35929K562FXR2
chr1156109600156109665+3'-UTR,CDS4.9867018.37614K562DDX6
chr1156104593156104641+3'-UTR,CDS,intron-Proximal3.075195.32196K562PUM1
chr1156109656156109780+3'-UTR4.505824.23722HepG2AGGF1
chr1156104595156104646+3'-UTR,CDS,intron-Proximal4.6572616.62180HepG2G3BP1
chr1156109769156109809+3'-UTR3.871414.82552K562UPF1
chr1156109292156109320+3'-UTR,intron-Distal3.4841211.67967K562TIA1
chr1156104316156104366+3'-UTR,CDS,intron-Proximal4.0903115.70997K562AQR
chr1156109132156109189+3'-UTR,intron-Distal3.3641211.97629HepG2PCBP2
chr1156104659156104745+3'-UTR,CDS3.2714624.44252K562UCHL5
chr1156104213156104301+3'-UTR,CDS3.4004328.65793K562UCHL5
chr1156104688156104732+3'-UTR,CDS4.7010620.74694K562GRWD1
chr1156084639156084757+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.0106715.38455K562RPS3
chr1156109247156109327+3'-UTR,intron-Distal3.5908216.78603K562PCBP1
chr1156104193156104228+3'-UTR,CDS,intron-Proximal3.8344210.95105HepG2G3BP1
chr1156104193156104233+3'-UTR,CDS,intron-Proximal3.6860310.68615HepG2RPS3
chr1156109239156109362+3'-UTR,intron-Distal3.5991824.00443K562DDX6
chr1156104193156104231+3'-UTR,CDS,intron-Proximal3.3850010.92013K562RPS3
chr1156104593156104638+3'-UTR,CDS,intron-Proximal3.578508.10388HepG2GRWD1
chr1156104745156104762+3'-UTR,CDS3.193467.03539HepG2G3BP1
chr1156084646156084726+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.2878016.62040HepG2RPS3
chr1156109235156109340+3'-UTR,intron-Distal3.484949.15475HepG2PCBP2
chr1156109553156109633+3'-UTR,CDS,intron-Proximal3.023116.36898K562LIN28B
chr1156109040156109090+3'-UTR,intron-Distal5.925969.21129HepG2SUB1
chr1156104316156104363+3'-UTR,CDS,intron-Proximal4.910297.02967HepG2PRPF8
chr1156109557156109657+3'-UTR,CDS,intron-Proximal3.446926.97623K562APOBEC3C
chr1156104304156104319+3'-UTR,CDS3.643359.28648HepG2G3BP1
chr1156104737156104768+3'-UTR,CDS,intron-Proximal3.300605.96568HepG2GRWD1
chr1156109348156109376+3'-UTR,intron-Distal6.0779419.32144K562PABPC4
chr1156084500156084534+3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.434423.02717K562DDX3X
chr1156109553156109604+3'-UTR,CDS,intron-Proximal3.7344315.92416K562UPF1
chr1156109668156109763+3'-UTR7.0939224.70004K562DDX6
chr1156109604156109686+3'-UTR,CDS3.9423722.05664K562UPF1
chr1156104591156104646+3'-UTR,CDS,intron-Proximal3.728643.30322HepG2ZNF800
chr1156104228156104277+3'-UTR,CDS4.359528.61994HepG2GRWD1
chr1156104308156104320+3'-UTR,CDS,intron-Proximal3.012855.81406HepG2GRWD1
chr1156104996156105061+3'-UTR,CDS4.200537.36086K562FMR1
chr1156104614156104632+3'-UTR,CDS3.2677719.20939K562ZNF622
chr1156109551156109600+3'-UTR,CDS,intron-Proximal3.092585.95571K562PUM2
chr1156109608156109685+3'-UTR,CDS3.535555.44944HepG2UPF1
chr1156109227156109351+3'-UTR,intron-Distal3.0239714.73724K562DDX55
chr1156107518156107585+3'-UTR,CDS,intron-Distal,intron-Proximal4.4597215.36066HepG2RPS3
chr1156105001156105097+3'-UTR,CDS3.6395724.54079K562RPS3
chr1156104644156104725+3'-UTR,CDS3.144445.43038HepG2PPIG
chr1156109310156109348+3'-UTR,intron-Distal5.4341321.91748K562PABPC4
chr1156104279156104304+3'-UTR,CDS3.2931710.15478HepG2G3BP1
chr1156104659156104716+3'-UTR,CDS4.2038013.15005K562FMR1
chr1156109114156109188+3'-UTR,intron-Distal3.4871840.16039K562PABPC4
chr1156104657156104689+3'-UTR,CDS3.8148825.76175K562ZNF622
chr1156104593156104637+3'-UTR,CDS,intron-Proximal3.0978917.15431K562ZNF800
chr1156100412156100507+5'-UTR,CDS,intron-Proximal3.591986.69001K562FMR1
chr1156100436156100487+5'-UTR,CDS,intron-Proximal3.7827717.20212K562RPS3
chr1156100508156100565+5'-UTR,CDS,intron-Proximal4.3498820.38949K562RPS3
chr1156100444156100519+5'-UTR,CDS,intron-Proximal4.0483515.30753HepG2G3BP1
chr1156100525156100564+5'-UTR,CDS4.478529.30334HepG2RPS3
chr1156100407156100444+5'-UTR,CDS,intron-Proximal3.030275.96896HepG2G3BP1
chr1156100507156100565+5'-UTR,CDS,intron-Proximal4.5785711.53481K562FMR1
chr1156100459156100509+5'-UTR,CDS,intron-Proximal3.741556.73537HepG2RPS3
chr1156100412156100523+5'-UTR,CDS,intron-Proximal3.822179.20562K562FXR2
chr1156100519156100565+5'-UTR,CDS,intron-Proximal3.802159.64096HepG2G3BP1
chr1156106758156106820+CDS,intron-Proximal4.6418028.41458K562RPS3
chr1156107001156107023+CDS3.214963.36071HepG2RPS3
chr1156105053156105104+CDS,intron-Proximal3.483488.84022K562SND1
chr1156106190156106227+CDS3.550909.08070HepG2G3BP1
chr1156107444156107493+CDS,intron-Distal,intron-Proximal3.101936.72029K562SND1
chr1156107447156107492+CDS,intron-Distal3.932397.30054HepG2RPS3
chr1156106033156106103+CDS3.9020012.68753HepG2G3BP1
chr1156084838156084899+CDS,intron-Distal,intron-Proximal3.354815.95627K562RBM15
chr1156106226156106230+CDS,intron-Proximal4.4220220.92172K562AQR
chr1156084982156085042+CDS,intron-Distal4.9771212.55080HepG2G3BP1
chr1156105866156105912+CDS3.4716510.48685K562SND1
chr1156084844156084919+CDS,intron-Distal,intron-Proximal3.204295.41523K562SRSF1
chr1156084922156085061+CDS,intron-Distal,intron-Proximal3.8030130.36497K562RPS3
chr1156106678156106738+CDS,intron-Proximal3.793693.09957HepG2AQR
chr1156107444156107503+CDS,intron-Distal,intron-Proximal4.1860223.81942K562RPS3
chr1156106189156106227+CDS3.275858.82209K562UCHL5
chr1156105691156105714+CDS,intron-Proximal4.248609.10244HepG2G3BP1
chr1156105691156105712+CDS,intron-Proximal3.366534.86114K562SND1
chr1156084929156085036+CDS,intron-Distal,intron-Proximal3.403838.06358K562GRWD1
chr1156105780156105851+CDS3.167373.13134K562FXR2
chr1156105837156105884+CDS3.802386.39499HepG2GRWD1
chr1156107477156107528+CDS,intron-Distal3.105995.37860HepG2G3BP1
chr1156105659156105706+CDS,intron-Proximal3.809373.67894HepG2AQR
chr1156106964156107011+CDS3.995615.40651HepG2PPIG
chr1156106098156106193+CDS4.8019927.40178K562RPS3
chr1156085042156085065+CDS,intron-Distal3.0492311.03347K562ZNF622
chr1156105723156105766+CDS3.738756.15678K562GEMIN5
chr1156108816156108873+CDS,intron-Proximal4.740909.04180K562SF3B4
chr1156105796156105915+CDS,intron-Proximal3.9172232.61002K562RPS3
chr1156106889156106953+CDS,intron-Proximal3.1374113.84448K562BUD13
chr1156106054156106100+CDS4.111663.48187K562RBM15
chr1156106801156106865+CDS,intron-Proximal3.391226.60804HepG2PRPF8
chr1156106680156106724+CDS,intron-Proximal3.6401410.28666K562AQR
chr1156105074156105102+CDS3.042167.33292K562ZNF622
chr1156106755156106820+CDS,intron-Proximal3.040368.04084HepG2RPS3
chr1156106764156106819+CDS3.8342614.11697K562SND1
chr1156106901156106955+CDS,intron-Proximal3.3149710.63317HepG2RPS3
chr1156107022156107071+CDS,intron-Proximal4.9134212.24889HepG2PRPF8
chr1156106955156107001+CDS4.5146910.36166HepG2RPS3
chr1156106769156106820+CDS,intron-Proximal3.412488.54752HepG2G3BP1
chr1156106785156106821+CDS,intron-Proximal3.744663.85049HepG2SND1
chr1156105762156105844+CDS4.6749820.92742HepG2G3BP1
chr1156105061156105099+CDS4.806413.37588K562FMR1
chr1156106191156106228+CDS,intron-Proximal5.515526.36664K562DDX24
chr1156106003156106037+CDS,intron-Proximal3.142579.75360K562SND1
chr1156084990156085032+CDS,intron-Distal3.365733.39960K562FMR1
chr1156105046156105091+CDS3.922836.12687HepG2RPS3
chr1156106226156106269+CDS,intron-Proximal4.938587.02967HepG2PRPF8
chr1156108522156108604+CDS,intron-Distal,intron-Proximal6.0603915.60848HepG2PRPF8
chr1156105782156105870+CDS3.7492210.63502HepG2RPS3
chr1156105074156105102+CDS5.7111412.82329HepG2G3BP1
chr1156106002156106051+CDS,intron-Proximal3.8445617.65121K562RPS3
chr1156105714156105796+CDS4.1014825.75365K562RPS3
chr1156106039156106093+CDS3.794235.98979K562PCBP1
chr1156105713156105832+CDS3.650979.77890K562ZNF800
chr1156106903156106970+CDS,intron-Proximal3.0547010.14819HepG2G3BP1
chr1156106224156106291+CDS,intron-Proximal5.280096.03362HepG2AQR
chr1156106902156106949+CDS,intron-Proximal3.3907211.52982K562SND1
chr1156084758156084922+CDS,intron-Distal,intron-Proximal3.6605630.92496K562RPS3
chr1156105962156106019+CDS,intron-Proximal3.2281210.92216K562EFTUD2
chr1156105714156105762+CDS4.2148211.59987HepG2G3BP1
chr1156084724156084816+CDS,intron-Distal,intron-Proximal3.7288313.43513HepG2G3BP1
chr1156106006156106033+CDS3.422127.40596HepG2G3BP1
chr1156105705156105777+CDS3.777396.91002K562FMR1
chr1156084712156084908+CDS,intron-Distal,intron-Proximal3.3477412.09781K562ZNF800
chr1156107022156107057+CDS,intron-Proximal3.8514116.48806K562AQR
chr1156106903156106954+CDS,intron-Proximal4.2868014.71260K562RPS3
chr1156084838156084897+CDS,intron-Distal,intron-Proximal3.388688.30798HepG2G3BP1
chr1156106193156106228+CDS,intron-Proximal4.966229.57830K562RPS3
chr1156106045156106093+CDS3.229027.09531K562SND1
chr1156106047156106088+CDS3.966576.61983HepG2RPS3
chr1156084916156084982+CDS,intron-Distal,intron-Proximal4.5155615.31205HepG2G3BP1
chr1156105721156105782+CDS5.0843915.20997HepG2RPS3
chr1156107442156107522+CDS,intron-Distal,intron-Proximal3.253537.82548HepG2LARP4
chr1156108236156108320+CDS,intron-Proximal3.219706.31501K562SF3B4
chr1156106711156106736+CDS,intron-Proximal3.266397.03539HepG2G3BP1
chr1156105722156105805+CDS4.413953.47570HepG2FTO
chr1156054748156054818+intron-Distal4.337503.26170K562EIF4G2
chr1156108619156108696+intron-Distal,intron-Proximal6.2558529.90064HepG2XPO5
chr1156104366156104432+intron-Distal,intron-Proximal5.3302112.17654K562AQR
chr1156088616156088688+intron-Distal3.029874.63037HepG2HNRNPC
chr1156107657156107693+intron-Distal4.507904.43116HepG2RBFOX2
chr1156107791156107855+intron-Distal3.789476.70492K562RBFOX2
chr1156108102156108165+intron-Distal3.552998.18953HepG2RBFOX2
chr1156107855156108025+intron-Distal3.8096114.68472K562RBFOX2
chr1156104411156104479+intron-Distal,intron-Proximal3.717544.09469HepG2XPO5
chr1156063682156063777+intron-Distal5.047465.77028HepG2PCBP2
chr1156085068156085142+intron-Distal,intron-Proximal4.006996.98960K562RBM15
chr1156105174156105237+intron-Distal,intron-Proximal5.9359010.20211HepG2EFTUD2
chr1156106291156106330+intron-Distal,intron-Proximal6.1300211.52475K562EFTUD2
chr1156107901156108020+intron-Distal4.4974816.93885HepG2RBFOX2
chr1156107658156107716+intron-Distal3.232804.74790K562RBFOX2
chr1156108549156108563+intron-Distal,intron-Proximal4.577074.13847K562AQR
chr1156104864156104912+intron-Distal,intron-Proximal3.879513.31322HepG2SF3B4
chr1156107784156107872+intron-Distal3.7605112.30770HepG2RBFOX2
chr1156091448156091531+intron-Distal3.359763.60809HepG2HNRNPK
chr1156104856156104897+intron-Distal,intron-Proximal5.069206.02529K562SF3B4
chr1156108102156108182+intron-Distal,intron-Proximal3.886633.11802K562HNRNPK
chr1156104358156104441+intron-Distal,intron-Proximal5.445635.24235HepG2EFTUD2
chr1156107665156107709+intron-Distal3.223463.78727K562PRPF8
chr1156108563156108607+intron-Distal,intron-Proximal5.342337.28294K562AQR
chr1156108696156108742+intron-Distal4.878519.37564HepG2XPO5
chr1156105178156105237+intron-Distal,intron-Proximal4.3573810.16714K562AQR
chr1156105205156105232+intron-Distal5.658315.43043K562EFTUD2
chr1156104929156104964+intron-Proximal5.604398.42776K562SF3B4
chr1156106269156106317+intron-Proximal6.4645416.98862K562AQR
chr1156108813156108870+intron-Proximal4.477146.01148HepG2EFTUD2
chr1156106836156106891+intron-Proximal3.9479111.49539K562EFTUD2
chr1156106263156106268+intron-Proximal7.3498134.52988K562AQR
chr1156105104156105157+intron-Proximal4.168936.79537K562AQR
chr1156106230156106263+intron-Proximal5.7973933.54095K562AQR
chr1156106236156106258+intron-Proximal4.185544.19412K562EFTUD2
chr1156107057156107066+intron-Proximal4.5340716.15323K562AQR
chr1156104770156104816+intron-Proximal6.0135811.56697K562AQR
chr1156108814156108866+intron-Proximal3.688775.23533HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LMNA is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LMNA is not available on ENCORE database.

  • 127 RBPs can affect the levels of LMNA.  








The Knockdown/knockout RNA-Seq assay for LMNA is not available on ENCORE database.





127 RBPs can affect the gene expression of LMNA :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LMNAENSG00000160789.152638.997703407.30090-0.368602.961001.98380HepG2ABCF1
LMNAENSG00000160789.156413.392803407.835700.9121052.0842050.26740HepG2ACO1
LMNAENSG00000160789.154178.311203423.707800.287304.725603.74460HepG2AKAP8L
LMNAENSG00000160789.155998.371904676.346200.359105.898504.95870HepG2AUH
LMNAENSG00000160789.153663.755502773.725000.401404.282103.55600HepG2BOP1
LMNAENSG00000160789.154562.055102188.506501.0596021.0496019.61240HepG2CELF1
LMNAENSG00000160789.152328.581903151.68300-0.4367011.050709.60690HepG2DDX19B
LMNAENSG00000160789.15839.352501381.92450-0.719303.351402.34080HepG2DDX24
LMNAENSG00000160789.153311.507701759.887700.911904.479603.52000HepG2DDX55
LMNAENSG00000160789.154578.721402492.838000.877103.137402.48350HepG2DDX6
LMNAENSG00000160789.15861.699401085.11810-0.332602.404901.49020HepG2DHX30
LMNAENSG00000160789.152220.292903260.33210-0.5543014.2528012.96490HepG2DKC1
LMNAENSG00000160789.151760.147001125.043500.6456012.8934011.46360HepG2DNAJC21
LMNAENSG00000160789.151830.444201115.171000.7148022.2999020.61030HepG2DNAJC2
LMNAENSG00000160789.152667.389901757.352000.601903.591702.55040HepG2EEF2
LMNAENSG00000160789.151922.069002321.54960-0.272402.416101.62510HepG2EIF4G1
LMNAENSG00000160789.151768.236602951.29800-0.7390012.3039010.28350HepG2ESF1
LMNAENSG00000160789.153240.972305369.39910-0.7283019.9137018.54910HepG2ETF1
LMNAENSG00000160789.154337.375603440.462300.334102.393101.67260HepG2FIP1L1
LMNAENSG00000160789.151136.234202550.88910-1.166707.110505.49500HepG2FTO
LMNAENSG00000160789.151285.179702191.12050-0.7697013.7713012.07600HepG2FUBP3
LMNAENSG00000160789.152165.044801436.630200.591603.127802.04250HepG2GNB2L1
LMNAENSG00000160789.153182.552202744.296400.213602.796602.07570HepG2HNRNPF
LMNAENSG00000160789.153212.042502143.484300.5834017.5531015.99330HepG2HNRNPL
LMNAENSG00000160789.151847.236201255.058600.557503.428202.76070HepG2HNRNPU
LMNAENSG00000160789.154136.362702517.542100.716203.762702.98530HepG2IGF2BP2
LMNAENSG00000160789.151722.737801281.997200.426209.187607.92960HepG2ILF2
LMNAENSG00000160789.152769.768003115.08520-0.169502.328001.39200HepG2KIF1C
LMNAENSG00000160789.152509.644501408.064600.833706.338004.64310HepG2LARP7
LMNAENSG00000160789.154088.704502687.315300.605402.463601.86550HepG2MATR3
LMNAENSG00000160789.151604.797602809.66540-0.808004.054702.87050HepG2MTPAP
LMNAENSG00000160789.151735.551502337.89440-0.429804.995703.37410HepG2NAA15
LMNAENSG00000160789.154023.472602333.345100.7859021.4546019.46020HepG2NOL12
LMNAENSG00000160789.151236.44940657.137600.911802.989901.48180HepG2NOLC1
LMNAENSG00000160789.153384.784201617.073601.065605.072303.56580HepG2NONO
LMNAENSG00000160789.151490.959602442.48800-0.712107.545906.35180HepG2NSUN2
LMNAENSG00000160789.153635.444101855.138400.970504.862103.65820HepG2PABPC1
LMNAENSG00000160789.153342.788602635.495800.342905.975005.13630HepG2PCBP1
LMNAENSG00000160789.151985.045901119.408400.8263011.4443010.00360HepG2PPIL4
LMNAENSG00000160789.15909.028402099.98570-1.2080038.9266036.72660HepG2PRPF4
LMNAENSG00000160789.152326.670401356.502100.778302.737701.93300HepG2PRPF8
LMNAENSG00000160789.154046.994102681.872200.5935017.5438016.39370HepG2PTBP1
LMNAENSG00000160789.153896.251802227.401300.806606.952006.06280HepG2PUF60
LMNAENSG00000160789.153069.066402364.507200.376209.398408.44220HepG2PUM1
LMNAENSG00000160789.154116.758802362.766200.800902.973702.27800HepG2PUM2
LMNAENSG00000160789.155145.287303885.987800.404902.402101.59680HepG2RBM15
LMNAENSG00000160789.152479.845101698.000800.546302.491201.55470HepG2RBM27
LMNAENSG00000160789.152365.631801565.826200.595202.833902.02420HepG2RPS2
LMNAENSG00000160789.153019.517201598.563100.917408.825306.91280HepG2RPS5
LMNAENSG00000160789.152210.980101117.673000.9841015.5372014.19640HepG2SAFB2
LMNAENSG00000160789.151386.001302726.18850-0.9760014.0135012.55400HepG2SF3B1
LMNAENSG00000160789.153159.144102135.776600.564708.846607.70460HepG2SLBP
LMNAENSG00000160789.152735.296601303.375101.0693058.6103056.39460HepG2SMN1
LMNAENSG00000160789.152620.513701232.209801.088508.449406.73400HepG2SMNDC1
LMNAENSG00000160789.152218.298103033.41210-0.451502.123901.44190HepG2SNRNP70
LMNAENSG00000160789.155385.509802199.261201.2920081.3135078.62670HepG2SRSF5
LMNAENSG00000160789.152805.584704400.56340-0.6494019.0281017.94140HepG2SSB
LMNAENSG00000160789.153746.901102501.142900.5830020.6119019.16350HepG2SUCLG1
LMNAENSG00000160789.153036.724501751.619400.793704.808503.95380HepG2SUPV3L1
LMNAENSG00000160789.151072.063102619.75770-1.2890027.5475026.01370HepG2TAF15
LMNAENSG00000160789.151891.207202685.33280-0.505804.608203.70420HepG2TARDBP
LMNAENSG00000160789.151781.643501173.853100.601902.224101.32100HepG2TFIP11
LMNAENSG00000160789.152395.237001219.446600.973803.234002.70010HepG2TIAL1
LMNAENSG00000160789.152369.430501230.430600.9453034.5210032.80550HepG2TRIM56
LMNAENSG00000160789.153407.422202176.113300.646804.657503.49060HepG2TUFM
LMNAENSG00000160789.154506.501602303.405700.968102.330001.56660HepG2UBE2L3
LMNAENSG00000160789.154257.447503054.612300.478907.028006.26080HepG2ZNF622
LMNAENSG00000160789.154242.205902891.953900.552707.431505.45380K562ABCF1
LMNAENSG00000160789.158764.520704221.794501.0537018.3495017.00910K562AGGF1
LMNAENSG00000160789.158533.861404639.621500.8791015.3533012.58480K562AKAP8
LMNAENSG00000160789.159186.438204393.093401.0642016.1480014.33310K562AKAP8L
LMNAENSG00000160789.156337.922804934.948400.360903.209802.58640K562AQR
LMNAENSG00000160789.156381.548504609.648500.469104.646903.42700K562ATP5C1
LMNAENSG00000160789.153423.934602207.841900.632903.135501.71730K562BCCIP
LMNAENSG00000160789.154170.217402133.700200.9667044.8822041.50470K562BCLAF1
LMNAENSG00000160789.152469.277501456.563400.7614010.513908.76070K562BOP1
LMNAENSG00000160789.152847.127001671.970900.7679010.766008.26170K562CCAR1
LMNAENSG00000160789.153386.330402008.084000.753807.519905.51730K562CIRBP
LMNAENSG00000160789.154184.997902987.614400.486102.880601.40910K562CKAP4
LMNAENSG00000160789.152411.893601548.710900.6390010.840109.27310K562CPSF6
LMNAENSG00000160789.153284.066101618.729901.0205012.002409.61280K562CSTF2
LMNAENSG00000160789.152741.007701762.281500.637204.272401.95060K562DDX1
LMNAENSG00000160789.156371.460504145.677300.619908.692406.54660K562DDX21
LMNAENSG00000160789.152614.770801870.659400.483009.657607.23710K562DDX27
LMNAENSG00000160789.155012.410503874.899500.371202.566301.56360K562DDX3X
LMNAENSG00000160789.153890.518001891.627001.040202.904801.59010K562EEF2
LMNAENSG00000160789.153705.774301826.987901.020206.516105.06790K562EFTUD2
LMNAENSG00000160789.154530.732403311.326900.452202.883402.15230K562EIF2S2
LMNAENSG00000160789.151710.102901177.886100.537808.500607.11030K562EIF3G
LMNAENSG00000160789.154521.989103533.984900.355604.587502.85460K562EWSR1
LMNAENSG00000160789.153595.572702742.793300.390502.634901.40240K562EXOSC5
LMNAENSG00000160789.153368.560202079.035500.6961011.375809.53320K562FIP1L1
LMNAENSG00000160789.152060.842901575.842300.387003.459502.50000K562FMR1
LMNAENSG00000160789.152082.504201335.697100.640606.009904.60750K562FTO
LMNAENSG00000160789.152890.358604210.25260-0.542706.548205.67370K562FXR1
LMNAENSG00000160789.15315.58020936.68500-1.569605.494404.42250K562G3BP2
LMNAENSG00000160789.155295.514704311.271900.296603.737502.42160K562GLRX3
LMNAENSG00000160789.152574.662801478.610600.8000014.6742012.80410K562GPKOW
LMNAENSG00000160789.156173.261304412.061400.484505.612804.53300K562GRSF1
LMNAENSG00000160789.156721.659104626.230300.538902.595601.42590K562HNRNPA2B1
LMNAENSG00000160789.151327.625301710.14540-0.365302.469201.59260K562HNRNPM
LMNAENSG00000160789.156713.029505215.042200.364206.165604.82000K562HNRNPU
LMNAENSG00000160789.152208.028802818.57770-0.352203.111102.26930K562HSPD1
LMNAENSG00000160789.154424.645801874.824301.238705.377603.75040K562IGF2BP2
LMNAENSG00000160789.153252.633201906.456600.770609.561907.19070K562IGF2BP3
LMNAENSG00000160789.152392.874001687.830700.503503.701101.98540K562KHDRBS1
LMNAENSG00000160789.157567.040804661.732500.698808.327406.69440K562KIF1C
LMNAENSG00000160789.152719.352801969.145500.465602.428801.63840K562MAGOH
LMNAENSG00000160789.156841.023304462.780100.616208.533206.23650K562MAK16
LMNAENSG00000160789.152977.956201964.965000.599705.259103.93460K562MATR3
LMNAENSG00000160789.156922.051905222.379000.406403.365502.34580K562MBNL1
LMNAENSG00000160789.152613.000901443.300400.8562017.5507015.25220K562METAP2
LMNAENSG00000160789.154828.627303660.548000.399502.169101.40950K562NAA15
LMNAENSG00000160789.153222.586401803.047700.837703.526102.02510K562NONO
LMNAENSG00000160789.157303.459605035.900800.5362015.2912013.73020K562NSUN2
LMNAENSG00000160789.157058.924704049.136700.801704.952803.51960K562PABPN1
LMNAENSG00000160789.153097.318501925.410200.685807.058004.84000K562PCBP1
LMNAENSG00000160789.153699.725502360.273800.648409.588207.80970K562PPIG
LMNAENSG00000160789.153354.581801913.239400.8100018.3421016.70670K562PTBP1
LMNAENSG00000160789.155240.210007242.44620-0.466904.557603.16220K562PUM1
LMNAENSG00000160789.1511563.346804355.850701.4084047.4213045.10720K562PUS1
LMNAENSG00000160789.158261.789704244.860000.9606024.3415022.50520K562RBM15
LMNAENSG00000160789.153025.889601833.901000.722308.188206.63630K562RBM22
LMNAENSG00000160789.152403.177803701.09650-0.623004.320002.31560K562RPS3A
LMNAENSG00000160789.151914.955902465.29920-0.364503.241501.66620K562SDAD1
LMNAENSG00000160789.152541.962901841.198000.465203.227501.85220K562SLBP
LMNAENSG00000160789.15671.815201081.59590-0.687003.530401.68840K562SND1
LMNAENSG00000160789.152958.891001776.477500.735903.305101.48860K562SRP68
LMNAENSG00000160789.152969.630501875.749600.662704.237103.36960K562SRSF1
LMNAENSG00000160789.153164.736502042.298200.6318010.899408.69400K562SRSF4
LMNAENSG00000160789.153466.248101771.843500.9680018.3908015.56720K562SRSF5
LMNAENSG00000160789.154906.167503698.842100.407403.951702.53240K562SRSF7
LMNAENSG00000160789.153379.549502494.700000.437904.055602.48830K562STAU1
LMNAENSG00000160789.153623.729801719.869501.075105.311903.86250K562SUPV3L1
LMNAENSG00000160789.151502.137002684.17310-0.8375016.2337014.27400K562SYNCRIP
LMNAENSG00000160789.154862.513901898.085601.357108.810507.45470K562TARDBP
LMNAENSG00000160789.154175.991201830.995501.1894017.6577015.43600K562TIA1
LMNAENSG00000160789.153975.729301797.450401.145205.557603.89180K562TRA2A
LMNAENSG00000160789.153223.627802431.449300.406803.754102.07020K562TRIP6
LMNAENSG00000160789.158366.502005943.752700.4932015.6409012.73640K562TROVE2
LMNAENSG00000160789.15528.45190936.73480-0.825902.937502.10990K562U2AF2
LMNAENSG00000160789.153035.799601821.031300.737202.612201.62550K562UCHL5
LMNAENSG00000160789.156676.453205339.710000.322203.800602.97150K562UPF1
LMNAENSG00000160789.157027.304304417.281500.669704.136002.44870K562UTP18
LMNAENSG00000160789.153465.205302624.681500.400703.564802.19500K562UTP3
LMNAENSG00000160789.157389.630805849.003700.337202.919101.59020K562WRN
LMNAENSG00000160789.153532.209401855.519800.928604.448102.78080K562XRN2
LMNAENSG00000160789.158477.839505558.399700.608909.787308.05020K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LMNA is not available on ENCORE database.





7 RBPs can affect the splicing of LMNA :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
RILMNAENSG00000160789.15chr1+1561074441561085481561074441561075341561082781561085480.417000.000000.00000includedHepG2U2AF2
RILMNAENSG00000160789.15chr1+156107444156108548156107444156107534156108278156108548-0.213000.000060.00145excludedHepG2PCBP1
RILMNAENSG00000160789.15chr1+1561067111561070231561067111561068191561069031561070230.086000.000000.00000includedK562RBM22
RILMNAENSG00000160789.15chr1+156084503156085065156084503156084582156084754156085065-0.143000.008480.06805excludedHepG2TAF15
RILMNAENSG00000160789.15chr1+1561074441561085481561074441561075341561082781561085480.374000.000120.00178includedHepG2U2AF1
RILMNAENSG00000160789.15chr1+1561074441561085481561074441561075341561082781561085480.139000.006030.05674includedK562RBM15
RILMNAENSG00000160789.15chr1+1561067111561070231561067111561068191561069031561070230.060000.000000.00000includedHepG2RBM22
RILMNAENSG00000160789.15chr1+156107444156108548156107444156107534156108278156108548-0.310000.001770.09762excludedK562FMR1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for LMNA is not avaliable on ENCORE database.