HMGA2

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	HMGA2	ENSG00000149948.13	0.37	0.28	0.33	ENCSR000AEF
HepG2	HMGA2	ENSG00000149948.13	67.71	125.15	96.43	ENCSR985KAT
K562	HMGA2	ENSG00000149948.13	0.01	0.00	0.01	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for HMGA2 is not avaliable on ENCORE database.

Proteins bound to RNA

HMGA2 RNA is bound by 38 proteins.

eCLIP assay for HMGA2 is not avaliable on ENCORE database.

38 proteins are bound to HMGA2 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	66359908	66359971	+	3'-UTR	5.04659	6.54999	HepG2	DDX6
chr12	66357211	66357264	+	3'-UTR	6.58308	14.89893	HepG2	GTF2F1
chr12	66359167	66359220	+	3'-UTR	4.10466	5.10201	HepG2	IGF2BP1
chr12	66357262	66357335	+	3'-UTR	3.65557	9.56070	HepG2	LARP4
chr12	66359863	66359974	+	3'-UTR	4.77365	18.56498	HepG2	DDX55
chr12	66357258	66357335	+	3'-UTR	3.84111	6.09642	HepG2	DDX55
chr12	66358399	66358478	+	3'-UTR	5.04344	4.62953	HepG2	IGF2BP3
chr12	66357875	66357901	+	3'-UTR	4.23347	5.85910	HepG2	IGF2BP1
chr12	66360008	66360067	+	3'-UTR	3.81847	3.50219	HepG2	CSTF2
chr12	66359873	66359941	+	3'-UTR	3.91579	23.45902	HepG2	FUBP3
chr12	66357020	66357085	+	3'-UTR,CDS,intron-Proximal	3.51373	10.01784	HepG2	GRWD1
chr12	66357208	66357265	+	3'-UTR	5.65936	11.47292	HepG2	PRPF4
chr12	66359941	66359980	+	3'-UTR	3.17271	11.05329	HepG2	FUBP3
chr12	66357363	66357434	+	3'-UTR	3.01726	8.96758	HepG2	DDX55
chr12	66357901	66357915	+	3'-UTR	3.90579	3.84724	HepG2	IGF2BP1
chr12	66357486	66357544	+	3'-UTR	4.44634	5.19607	HepG2	IGF2BP3
chr12	66357819	66357875	+	3'-UTR	3.67516	6.11406	HepG2	IGF2BP1
chr12	66357209	66357264	+	3'-UTR	4.47642	10.14173	HepG2	FAM120A
chr12	66359694	66359711	+	3'-UTR	6.50933	51.90928	HepG2	LIN28B
chr12	66358371	66358423	+	3'-UTR	5.21427	5.34770	HepG2	IGF2BP1
chr12	66357361	66357432	+	3'-UTR	3.19198	4.25122	HepG2	TIAL1
chr12	66357203	66357250	+	3'-UTR	4.08708	10.77278	HepG2	PCBP2
chr12	66358292	66358347	+	3'-UTR	4.42870	3.27226	HepG2	IGF2BP3
chr12	66357398	66357488	+	3'-UTR	4.68657	8.36163	HepG2	IGF2BP1
chr12	66357233	66357316	+	3'-UTR	3.28826	4.00430	HepG2	UPF1
chr12	66359711	66359743	+	3'-UTR	6.89977	400.00000	HepG2	LIN28B
chr12	66358275	66358362	+	3'-UTR	5.49461	15.87952	HepG2	IGF2BP1
chr12	66357375	66357430	+	3'-UTR	3.59651	3.70461	HepG2	TIA1
chr12	66357220	66357258	+	3'-UTR	5.08190	4.03560	HepG2	DDX55
chr12	66357837	66357901	+	3'-UTR	4.33192	3.63953	HepG2	IGF2BP3
chr12	66359743	66359781	+	3'-UTR	6.60288	57.72342	HepG2	LIN28B
chr12	66358268	66358343	+	3'-UTR	3.62422	4.71462	HepG2	HNRNPL
chr12	66359932	66359990	+	3'-UTR	4.25212	3.24831	HepG2	TIA1
chr12	66357228	66357323	+	3'-UTR	6.55712	12.53485	HepG2	DDX6
chr12	66218810	66218868	+	5'-UTR	3.39337	9.38767	HepG2	PCBP2
chr12	66218998	66219066	+	5'-UTR,CDS	3.02088	9.81324	HepG2	PTBP1
chr12	66218405	66218464	+	5'-UTR	3.27717	12.20686	HepG2	PCBP2
chr12	66218151	66218256	+	5'-UTR	3.95772	55.53077	HepG2	HNRNPL
chr12	66218389	66218467	+	5'-UTR	3.13366	3.44615	HepG2	IGF2BP3
chr12	66218316	66218377	+	5'-UTR	3.70036	12.69218	HepG2	PTBP1
chr12	66218448	66218517	+	5'-UTR	3.30285	17.19154	HepG2	PTBP1
chr12	66218627	66218701	+	5'-UTR	4.02470	3.27788	HepG2	IGF2BP3
chr12	66218706	66218786	+	5'-UTR	4.28041	35.99430	HepG2	PCBP2
chr12	66218614	66218704	+	5'-UTR	3.68295	18.43370	HepG2	PTBP1
chr12	66218517	66218597	+	5'-UTR	4.81561	50.88904	HepG2	PTBP1
chr12	66218996	66219100	+	5'-UTR,CDS	3.04675	4.42956	HepG2	SRSF1
chr12	66218256	66218301	+	5'-UTR	4.52737	9.89634	HepG2	HNRNPL
chr12	66219141	66219202	+	CDS,intron-Proximal	3.17630	3.30959	HepG2	AQR
chr12	66219151	66219207	+	CDS,intron-Proximal	3.09664	6.92749	HepG2	PRPF8
chr12	66222986	66223041	+	intron-Distal	5.08192	4.85866	HepG2	QKI
chr12	66221438	66221475	+	intron-Distal	3.89371	5.29732	HepG2	KHSRP
chr12	66290291	66290385	+	intron-Distal	3.10955	8.70054	HepG2	PTBP1
chr12	66245546	66245564	+	intron-Distal	5.62225	47.35890	HepG2	QKI
chr12	66336392	66336496	+	intron-Distal	3.59398	3.30829	HepG2	CSTF2
chr12	66354497	66354575	+	intron-Distal	3.19158	3.06005	HepG2	QKI
chr12	66302406	66302472	+	intron-Distal	3.89473	4.94624	HepG2	MATR3
chr12	66302313	66302371	+	intron-Distal	3.41346	3.10961	HepG2	MATR3
chr12	66307340	66307366	+	intron-Distal	3.08873	3.35050	HepG2	SUGP2
chr12	66228336	66228449	+	intron-Distal	3.27858	3.59783	HepG2	HNRNPK
chr12	66266637	66266715	+	intron-Distal	3.77544	15.01528	HepG2	SUGP2
chr12	66233054	66233103	+	intron-Distal	3.91552	6.29761	HepG2	MATR3
chr12	66265561	66265645	+	intron-Distal	3.17178	9.96277	HepG2	SUGP2
chr12	66225770	66225921	+	intron-Distal	3.22920	5.83164	HepG2	TAF15
chr12	66330345	66330411	+	intron-Distal	4.34173	4.24565	HepG2	HNRNPL
chr12	66290438	66290674	+	intron-Distal	3.03796	12.48377	HepG2	SFPQ
chr12	66247041	66247093	+	intron-Distal	3.54717	4.29698	HepG2	SFPQ
chr12	66265969	66266006	+	intron-Distal	3.10710	7.00841	HepG2	SUGP2
chr12	66304360	66304421	+	intron-Distal	4.73218	6.25174	HepG2	MATR3
chr12	66302235	66302313	+	intron-Distal	4.31272	8.31278	HepG2	MATR3
chr12	66274275	66274371	+	intron-Distal	4.44565	8.79916	HepG2	CSTF2
chr12	66245518	66245546	+	intron-Distal	4.79355	26.19738	HepG2	QKI
chr12	66219213	66219287	+	intron-Distal,intron-Proximal	3.59505	8.27668	HepG2	EFTUD2
chr12	66266735	66266775	+	intron-Distal	3.20800	7.27124	HepG2	MATR3
chr12	66219560	66219576	+	intron-Distal	4.26939	3.25012	HepG2	FKBP4
chr12	66222918	66222986	+	intron-Distal	3.67783	13.42395	HepG2	QKI
chr12	66266474	66266554	+	intron-Distal	4.52083	11.32673	HepG2	MATR3
chr12	66261607	66261658	+	intron-Distal,intron-Proximal	3.76610	3.31824	HepG2	TIAL1
chr12	66256021	66256052	+	intron-Distal	3.35400	11.53159	HepG2	HNRNPL
chr12	66257240	66257344	+	intron-Distal	3.64208	9.12328	HepG2	ILF3
chr12	66219443	66219469	+	intron-Distal	3.61522	4.76224	HepG2	NKRF
chr12	66265448	66265529	+	intron-Distal	3.49705	11.11879	HepG2	MATR3
chr12	66302134	66302221	+	intron-Distal	3.33426	6.54253	HepG2	MATR3
chr12	66266569	66266637	+	intron-Distal	4.42663	21.30534	HepG2	SUGP2
chr12	66228383	66228446	+	intron-Distal	4.16136	7.22843	HepG2	PTBP1
chr12	66266468	66266493	+	intron-Distal	3.03601	6.22873	HepG2	SUGP2
chr12	66221927	66221984	+	intron-Distal,intron-Proximal	3.50173	9.44198	HepG2	U2AF2
chr12	66302512	66302587	+	intron-Distal	3.44306	9.32175	HepG2	SUGP2
chr12	66265710	66265733	+	intron-Distal	3.31322	6.84019	HepG2	SUGP2
chr12	66249173	66249268	+	intron-Distal	3.83271	16.80507	HepG2	HNRNPL
chr12	66266493	66266569	+	intron-Distal	4.03639	17.82501	HepG2	SUGP2
chr12	66233064	66233120	+	intron-Distal	3.13716	8.33053	HepG2	SUGP2
chr12	66244838	66244923	+	intron-Distal	5.44590	75.79814	HepG2	QKI
chr12	66258722	66258791	+	intron-Distal	4.05864	13.82380	HepG2	PCBP2
chr12	66302246	66302310	+	intron-Distal	3.13537	6.67557	HepG2	PTBP1
chr12	66233283	66233329	+	intron-Distal	3.18298	6.04026	HepG2	MATR3
chr12	66225760	66225859	+	intron-Distal	4.15713	4.03101	HepG2	FUS
chr12	66277421	66277523	+	intron-Distal	3.02452	8.76599	HepG2	QKI
chr12	66244968	66245002	+	intron-Distal	3.67795	9.73065	HepG2	QKI
chr12	66302518	66302562	+	intron-Distal	3.56324	4.87826	HepG2	MATR3
chr12	66266776	66266847	+	intron-Distal	3.01552	14.94658	HepG2	SUGP2
chr12	66223923	66223983	+	intron-Distal	3.15587	5.70470	HepG2	CSTF2
chr12	66265710	66265814	+	intron-Distal	4.86389	22.49376	HepG2	MATR3
chr12	66265676	66265710	+	intron-Distal	4.64821	5.72657	HepG2	MATR3
chr12	66223904	66223987	+	intron-Distal	4.06257	6.75956	HepG2	U2AF2
chr12	66229663	66229724	+	intron-Distal	3.35444	4.05766	HepG2	CSTF2
chr12	66336483	66336592	+	intron-Distal	6.39910	17.57118	HepG2	QKI
chr12	66265907	66265954	+	intron-Distal	3.92362	7.98957	HepG2	SUGP2
chr12	66294756	66294842	+	intron-Distal	3.75434	5.56216	HepG2	KHSRP
chr12	66266551	66266621	+	intron-Distal	3.32710	4.14321	HepG2	HNRNPL
chr12	66233203	66233243	+	intron-Distal	4.47660	4.51355	HepG2	PTBP1
chr12	66244620	66244687	+	intron-Distal	3.07992	3.78819	HepG2	SFPQ
chr12	66244923	66244968	+	intron-Distal	5.84406	47.95171	HepG2	QKI
chr12	66233204	66233248	+	intron-Distal	4.77326	5.37222	HepG2	MATR3
chr12	66278673	66278763	+	intron-Distal	3.59613	5.87019	HepG2	SFPQ
chr12	66231390	66231480	+	intron-Distal	4.33819	8.51210	HepG2	KHSRP
chr12	66265561	66265623	+	intron-Distal	3.54335	7.55978	HepG2	MATR3
chr12	66219950	66219965	+	intron-Distal	3.43616	3.71694	HepG2	NKRF
chr12	66240810	66240890	+	intron-Distal	3.04773	5.08563	HepG2	HNRNPL
chr12	66256111	66256166	+	intron-Distal	3.01442	6.34170	HepG2	HNRNPL
chr12	66246355	66246422	+	intron-Distal	4.75111	22.02416	HepG2	QKI
chr12	66242102	66242185	+	intron-Distal	3.52597	7.84165	HepG2	QKI
chr12	66278570	66278673	+	intron-Distal	3.60731	8.22941	HepG2	SFPQ
chr12	66260468	66260533	+	intron-Distal	3.28918	8.14339	HepG2	CSTF2
chr12	66250622	66250690	+	intron-Distal	3.67444	4.94624	HepG2	MATR3
chr12	66343496	66343581	+	intron-Distal	3.95585	5.29549	HepG2	HNRNPL
chr12	66219368	66219436	+	intron-Distal	3.10842	4.96997	HepG2	FKBP4
chr12	66270700	66270843	+	intron-Distal	3.81037	4.45974	HepG2	GTF2F1
chr12	66224833	66224895	+	intron-Distal	3.82262	5.75194	HepG2	CSTF2
chr12	66255531	66255579	+	intron-Distal	3.94041	3.00640	HepG2	ZC3H11A
chr12	66221367	66221438	+	intron-Distal	4.40256	9.05220	HepG2	KHSRP
chr12	66253254	66253274	+	intron-Distal	3.69045	3.04956	HepG2	HNRNPL
chr12	66224174	66224228	+	intron-Distal	3.54546	6.41380	HepG2	KHSRP
chr12	66307419	66307491	+	intron-Distal	5.04292	6.80441	HepG2	MATR3
chr12	66301954	66302009	+	intron-Distal	3.90376	6.73852	HepG2	SUGP2
chr12	66261855	66261905	+	intron-Distal	4.26321	4.32882	HepG2	MATR3
chr12	66294713	66294783	+	intron-Distal	4.29201	11.33517	HepG2	CSTF2
chr12	66246760	66246834	+	intron-Distal	4.40229	3.26875	HepG2	SRSF9
chr12	66302285	66302378	+	intron-Distal	3.66215	11.20254	HepG2	SUGP2
chr12	66246557	66246612	+	intron-Distal	3.05962	5.54123	HepG2	QKI
chr12	66295448	66295534	+	intron-Distal	3.27400	5.38424	HepG2	HNRNPL
chr12	66256088	66256163	+	intron-Distal	3.23868	3.28377	HepG2	GTF2F1
chr12	66265079	66265102	+	intron-Distal	3.14735	4.61989	HepG2	SUGP2
chr12	66244726	66244802	+	intron-Distal	3.19192	6.59629	HepG2	PTBP1
chr12	66250316	66250394	+	intron-Distal	3.47230	7.80569	HepG2	SUGP2
chr12	66224727	66224801	+	intron-Distal	5.21701	8.38423	HepG2	CSTF2
chr12	66233377	66233415	+	intron-Distal	4.05503	8.58807	HepG2	MATR3
chr12	66245564	66245607	+	intron-Distal	4.56250	49.06184	HepG2	QKI
chr12	66265733	66265812	+	intron-Distal	4.60605	29.10619	HepG2	SUGP2
chr12	66266874	66266903	+	intron-Distal	4.00095	6.51675	HepG2	SUGP2
chr12	66304115	66304200	+	intron-Distal	3.84136	6.82051	HepG2	QKI
chr12	66310637	66310709	+	intron-Distal	4.14996	4.22186	HepG2	TAF15
chr12	66266469	66266555	+	intron-Distal	3.00409	5.33660	HepG2	PTBP1
chr12	66266985	66267020	+	intron-Distal	4.32312	9.06128	HepG2	SUGP2
chr12	66266411	66266469	+	intron-Distal	3.02427	5.09956	HepG2	PTBP1
chr12	66270266	66270347	+	intron-Distal	3.02790	4.30735	HepG2	HNRNPL
chr12	66228322	66228394	+	intron-Distal	3.53282	4.06762	HepG2	U2AF2
chr12	66267032	66267083	+	intron-Distal	4.32570	10.04909	HepG2	SUGP2
chr12	66233494	66233552	+	intron-Distal	4.03322	10.73957	HepG2	SUGP2
chr12	66278217	66278273	+	intron-Distal	4.02306	3.80778	HepG2	QKI
chr12	66234511	66234579	+	intron-Distal	3.44681	4.70908	HepG2	QKI
chr12	66266212	66266323	+	intron-Distal	3.19806	14.50711	HepG2	SUGP2
chr12	66274235	66274275	+	intron-Distal	3.58515	6.64307	HepG2	CSTF2
chr12	66235227	66235300	+	intron-Distal	3.32274	4.53269	HepG2	HNRNPM
chr12	66265660	66265709	+	intron-Distal	3.36643	8.84312	HepG2	SUGP2
chr12	66222883	66222973	+	intron-Distal	3.41976	3.37563	HepG2	FUBP3
chr12	66266775	66266821	+	intron-Distal	3.10528	5.54272	HepG2	MATR3
chr12	66249186	66249267	+	intron-Distal	4.40916	22.97433	HepG2	PTBP1
chr12	66233635	66233714	+	intron-Distal	3.12565	6.98117	HepG2	MATR3
chr12	66265865	66265907	+	intron-Distal	3.65725	7.75281	HepG2	SUGP2
chr12	66231399	66231449	+	intron-Distal	4.36630	4.01944	HepG2	FUBP3
chr12	66246834	66246989	+	intron-Distal	4.74374	9.97977	HepG2	SRSF9
chr12	66302145	66302216	+	intron-Distal	3.14262	4.30137	HepG2	PTBP1
chr12	66266116	66266133	+	intron-Distal	4.69698	3.96879	HepG2	MATR3
chr12	66222866	66222912	+	intron-Distal	3.67928	5.90314	HepG2	KHSRP
chr12	66233494	66233547	+	intron-Distal	4.09269	5.13840	HepG2	MATR3
chr12	66250328	66250385	+	intron-Distal	3.53602	6.01170	HepG2	MATR3
chr12	66266409	66266468	+	intron-Distal	3.04277	10.52476	HepG2	SUGP2
chr12	66265415	66265536	+	intron-Distal	3.68144	20.27172	HepG2	SUGP2
chr12	66254001	66254066	+	intron-Distal	3.67364	8.44070	HepG2	HNRNPL
chr12	66257657	66257740	+	intron-Distal	3.78363	4.73419	HepG2	ILF3
chr12	66256052	66256082	+	intron-Distal	3.20409	10.39902	HepG2	HNRNPL
chr12	66266660	66266707	+	intron-Distal	4.51312	9.41611	HepG2	MATR3
chr12	66278763	66278827	+	intron-Distal	4.04958	5.10890	HepG2	SFPQ
chr12	66250241	66250312	+	intron-Distal	3.63924	7.23139	HepG2	MATR3
chr12	66266385	66266474	+	intron-Distal	3.42186	7.06238	HepG2	MATR3
chr12	66236232	66236290	+	intron-Distal,intron-Proximal	3.99950	12.11363	HepG2	QKI
chr12	66265812	66265848	+	intron-Distal	4.58873	16.58468	HepG2	SUGP2
chr12	66307089	66307183	+	intron-Distal	4.25603	12.76219	HepG2	SUGP2
chr12	66250502	66250555	+	intron-Distal	3.59801	4.83120	HepG2	MATR3
chr12	66246422	66246490	+	intron-Distal	3.82510	14.55882	HepG2	QKI
chr12	66219430	66219479	+	intron-Distal	3.90408	7.21446	HepG2	DGCR8
chr12	66222912	66222976	+	intron-Distal	5.28793	18.04869	HepG2	KHSRP
chr12	66266724	66266773	+	intron-Distal	4.05109	15.71893	HepG2	SUGP2
chr12	66227700	66227821	+	intron-Distal	4.33150	4.80438	HepG2	KHSRP
chr12	66249271	66249348	+	intron-Distal	3.18664	7.35970	HepG2	HNRNPL
chr12	66219376	66219431	+	intron-Distal	3.49237	4.83318	HepG2	GTF2F1
chr12	66228319	66228447	+	intron-Distal	6.51989	77.93345	HepG2	PCBP2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for HMGA2 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for HMGA2 is not available on ENCORE database.
128 RBPs can affect the levels of HMGA2.

The Knockdown/knockout RNA-Seq assay for HMGA2 is not available on ENCORE database.

128 RBPs can affect the gene expression of HMGA2 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
HMGA2	ENSG00000149948.9	6519.92210	4644.68190	0.48920	6.81420	5.21150	HepG2	AATF
HMGA2	ENSG00000149948.9	5023.52560	8596.40050	-0.77500	11.93970	10.21110	HepG2	ABCF1
HMGA2	ENSG00000149948.9	4326.48360	5986.57080	-0.46850	14.91920	13.74550	HepG2	ACO1
HMGA2	ENSG00000149948.9	4148.80940	6666.57810	-0.68420	10.62720	8.84980	HepG2	ADAR
HMGA2	ENSG00000149948.9	4360.18240	6945.46240	-0.67170	7.72980	6.88840	HepG2	AKAP1
HMGA2	ENSG00000149948.9	3497.40000	5050.32690	-0.53010	2.72570	1.69560	HepG2	AKAP8
HMGA2	ENSG00000149948.9	4559.91920	6014.96760	-0.39950	9.26910	7.96670	HepG2	AKAP8L
HMGA2	ENSG00000149948.9	8447.56860	9509.32190	-0.17080	2.31540	1.67850	HepG2	AUH
HMGA2	ENSG00000149948.9	3405.13180	6017.42810	-0.82140	10.55110	8.66470	HepG2	BCCIP
HMGA2	ENSG00000149948.9	3096.74240	5228.99250	-0.75580	9.75390	8.19700	HepG2	BCLAF1
HMGA2	ENSG00000149948.9	4622.23290	8084.64470	-0.80660	17.01360	15.71210	HepG2	BOP1
HMGA2	ENSG00000149948.9	5096.79560	6441.70000	-0.33790	3.53010	2.14730	HepG2	BUD13
HMGA2	ENSG00000149948.9	5723.72470	8440.19780	-0.56030	12.24790	10.81700	HepG2	CALR
HMGA2	ENSG00000149948.9	2479.93880	5459.85890	-1.13860	25.46310	23.44330	HepG2	CIRBP
HMGA2	ENSG00000149948.9	5175.35320	5985.59470	-0.20980	4.03070	3.25710	HepG2	CKAP4
HMGA2	ENSG00000149948.9	6199.24400	4028.69730	0.62170	4.36940	3.40440	HepG2	CNOT7
HMGA2	ENSG00000149948.9	5796.22290	7422.16510	-0.35670	3.47450	2.71190	HepG2	CPSF6
HMGA2	ENSG00000149948.9	5001.17990	6836.50920	-0.45100	9.75740	7.90580	HepG2	YBX3
HMGA2	ENSG00000149948.9	6934.79010	8347.36170	-0.26750	4.48010	3.69720	HepG2	CELF1
HMGA2	ENSG00000149948.9	7191.40010	8976.17650	-0.31980	8.38760	7.20460	HepG2	DAZAP1
HMGA2	ENSG00000149948.9	3784.90740	5536.86970	-0.54880	20.01040	18.26300	HepG2	DDX19B
HMGA2	ENSG00000149948.9	4892.27370	6846.01200	-0.48480	11.03260	8.97160	HepG2	DDX1
HMGA2	ENSG00000149948.9	2358.99880	5126.58830	-1.11980	23.34500	21.63790	HepG2	DDX21
HMGA2	ENSG00000149948.9	3577.39800	5015.02390	-0.48730	8.09580	6.55090	HepG2	DDX24
HMGA2	ENSG00000149948.9	3629.46040	5536.03680	-0.60910	4.96370	3.30130	HepG2	DDX27
HMGA2	ENSG00000149948.9	4310.37380	6653.28090	-0.62630	7.94210	6.93260	HepG2	DDX3X
HMGA2	ENSG00000149948.9	4162.13850	5690.13570	-0.45110	5.61180	3.81250	HepG2	DDX47
HMGA2	ENSG00000149948.9	3740.60080	5916.21600	-0.66140	7.15950	5.98500	HepG2	DDX55
HMGA2	ENSG00000149948.9	4481.48210	7714.16480	-0.78350	14.29070	12.24060	HepG2	DDX5
HMGA2	ENSG00000149948.9	4152.44790	6474.59370	-0.64080	11.26190	9.46140	HepG2	DHX30
HMGA2	ENSG00000149948.9	2215.81100	5727.61000	-1.37010	90.55180	88.21010	HepG2	DKC1
HMGA2	ENSG00000149948.9	2621.59030	6712.88890	-1.35650	76.38430	73.55300	HepG2	DNAJC21
HMGA2	ENSG00000149948.9	4556.06300	6653.68590	-0.54640	23.70650	21.97070	HepG2	DNAJC2
HMGA2	ENSG00000149948.9	4254.12670	5975.24740	-0.49010	5.63480	4.35560	HepG2	EEF2
HMGA2	ENSG00000149948.9	3118.48170	4719.37080	-0.59780	5.46800	3.91730	HepG2	AGO1
HMGA2	ENSG00000149948.9	3974.49240	5494.26620	-0.46720	4.72880	3.96520	HepG2	EIF2S1
HMGA2	ENSG00000149948.9	3595.43630	4840.07600	-0.42890	6.40400	4.86370	HepG2	EIF3G
HMGA2	ENSG00000149948.9	2621.60970	6071.87030	-1.21170	22.65310	20.86390	HepG2	EIF4A3
HMGA2	ENSG00000149948.9	4584.33750	5911.70270	-0.36690	2.18710	1.57280	HepG2	EIF4B
HMGA2	ENSG00000149948.9	6442.62210	8854.93450	-0.45880	7.62480	6.36220	HepG2	EIF4G1
HMGA2	ENSG00000149948.9	6938.46600	8482.57090	-0.28990	2.69410	1.89010	HepG2	EIF4G2
HMGA2	ENSG00000149948.9	5909.26590	7447.53020	-0.33380	3.08090	1.93240	HepG2	ESF1
HMGA2	ENSG00000149948.9	8071.72010	10917.92390	-0.43580	12.15650	11.04260	HepG2	ETF1
HMGA2	ENSG00000149948.9	4117.73410	5850.23770	-0.50660	8.01510	6.60590	HepG2	EWSR1
HMGA2	ENSG00000149948.9	7010.97020	8680.58070	-0.30820	2.04270	1.37570	HepG2	FIP1L1
HMGA2	ENSG00000149948.9	4789.01530	7434.84360	-0.63460	2.69850	1.69410	HepG2	FTO
HMGA2	ENSG00000149948.9	4534.54390	3799.85120	0.25490	2.30350	1.58150	HepG2	FUBP3
HMGA2	ENSG00000149948.9	4628.16390	5682.93360	-0.29620	2.01940	1.44770	HepG2	G3BP1
HMGA2	ENSG00000149948.9	2484.80800	8413.65960	-1.75960	51.32710	48.99400	HepG2	GPKOW
HMGA2	ENSG00000149948.9	2400.35780	6777.20100	-1.49740	58.37700	56.21360	HepG2	HNRNPA1
HMGA2	ENSG00000149948.9	5439.15750	7538.40770	-0.47090	6.68960	5.65060	HepG2	HNRNPC
HMGA2	ENSG00000149948.9	3837.49300	6771.76640	-0.81940	34.37910	32.33200	HepG2	HNRNPF
HMGA2	ENSG00000149948.9	3879.44030	5754.26100	-0.56880	8.08280	6.93870	HepG2	HNRNPK
HMGA2	ENSG00000149948.9	6535.91790	8176.82620	-0.32320	10.50090	9.26620	HepG2	HNRNPL
HMGA2	ENSG00000149948.9	3458.43860	8029.30520	-1.21520	30.99320	29.25750	HepG2	HNRNPLL
HMGA2	ENSG00000149948.9	2736.14150	7488.56650	-1.45250	114.09080	111.07270	HepG2	HNRNPU
HMGA2	ENSG00000149948.9	3022.81490	6668.30420	-1.14140	41.82110	39.55440	HepG2	IGF2BP1
HMGA2	ENSG00000149948.9	1888.72330	5776.61200	-1.61280	46.71970	44.33980	HepG2	IGF2BP2
HMGA2	ENSG00000149948.9	5968.06670	7649.31860	-0.35810	12.15460	10.74030	HepG2	ILF2
HMGA2	ENSG00000149948.9	2842.17670	3927.21710	-0.46650	2.96580	1.58850	HepG2	ILF3
HMGA2	ENSG00000149948.9	10055.90230	13475.08380	-0.42230	3.20330	2.30760	HepG2	LARP4
HMGA2	ENSG00000149948.9	4117.25960	6070.87840	-0.56020	7.79750	5.84700	HepG2	LIN28B
HMGA2	ENSG00000149948.9	3643.15380	6128.21800	-0.75030	10.99150	9.71190	HepG2	MAGOH
HMGA2	ENSG00000149948.9	4201.43280	7026.72480	-0.74200	16.34970	14.57330	HepG2	MSI2
HMGA2	ENSG00000149948.9	5423.04530	8188.72280	-0.59450	4.53550	3.27320	HepG2	MTPAP
HMGA2	ENSG00000149948.9	5071.38290	6307.73330	-0.31470	2.30650	1.72580	HepG2	NCBP2
HMGA2	ENSG00000149948.9	3839.75450	7119.47310	-0.89080	19.54250	17.78570	HepG2	NSUN2
HMGA2	ENSG00000149948.9	2253.92700	3681.67080	-0.70790	4.69720	3.51760	HepG2	PABPC1
HMGA2	ENSG00000149948.9	4234.67350	5617.55870	-0.40770	3.61910	2.80060	HepG2	PABPC4
HMGA2	ENSG00000149948.9	8682.81170	7412.36790	0.22810	3.65930	2.69870	HepG2	PARN
HMGA2	ENSG00000149948.9	3810.60580	5548.01470	-0.54200	4.63780	2.49640	HepG2	PHF6
HMGA2	ENSG00000149948.9	5446.70390	6679.19860	-0.29430	4.44550	3.53160	HepG2	PPIL4
HMGA2	ENSG00000149948.9	5507.08120	6924.62780	-0.33040	6.77220	5.62330	HepG2	PRPF4
HMGA2	ENSG00000149948.9	2138.35690	4564.78660	-1.09400	21.55290	19.62040	HepG2	PRPF8
HMGA2	ENSG00000149948.9	3296.75500	8496.31800	-1.36580	52.30390	50.12570	HepG2	PUF60
HMGA2	ENSG00000149948.9	8100.93850	9018.98460	-0.15490	1.93380	1.41910	HepG2	PUM1
HMGA2	ENSG00000149948.9	7571.21830	9012.54100	-0.25140	3.14170	2.42700	HepG2	PUM2
HMGA2	ENSG00000149948.9	4913.51470	6097.75830	-0.31150	7.07900	6.17080	HepG2	PUS1
HMGA2	ENSG00000149948.9	5349.87540	6305.90460	-0.23720	2.75890	2.13500	HepG2	QKI
HMGA2	ENSG00000149948.9	6061.66800	9125.37450	-0.59020	17.34120	16.27060	HepG2	RBM22
HMGA2	ENSG00000149948.9	2936.64790	5660.45460	-0.94670	15.25940	12.89140	HepG2	RCC2
HMGA2	ENSG00000149948.9	4456.97500	6480.11290	-0.54000	16.56470	15.45440	HepG2	NELFE
HMGA2	ENSG00000149948.9	5301.24430	6035.60660	-0.18720	2.51460	1.92370	HepG2	RECQL
HMGA2	ENSG00000149948.9	3903.84520	7294.14020	-0.90180	20.83780	19.31520	HepG2	RPLP0
HMGA2	ENSG00000149948.9	4635.23550	6139.24070	-0.40540	2.26810	1.41080	HepG2	RPS10
HMGA2	ENSG00000149948.9	3603.99770	4719.83560	-0.38910	4.88850	4.09770	HepG2	RPS19
HMGA2	ENSG00000149948.9	3891.64030	6429.00340	-0.72420	11.73900	10.18810	HepG2	RPS2
HMGA2	ENSG00000149948.9	2712.15590	4043.70780	-0.57620	4.68980	3.64920	HepG2	RPS3A
HMGA2	ENSG00000149948.9	2328.03240	4515.60760	-0.95580	14.60620	13.05240	HepG2	RRP9
HMGA2	ENSG00000149948.9	5371.70010	6668.88510	-0.31210	3.74460	3.01470	HepG2	SAFB2
HMGA2	ENSG00000149948.9	3018.18450	4737.31400	-0.65040	9.20610	7.51560	HepG2	SERBP1
HMGA2	ENSG00000149948.9	2622.57520	6743.91910	-1.36260	22.12770	20.17710	HepG2	SF3A3
HMGA2	ENSG00000149948.9	3569.64660	7947.45890	-1.15470	32.29690	30.20930	HepG2	SF3B1
HMGA2	ENSG00000149948.9	4854.10220	6062.01200	-0.32060	6.47960	5.63710	HepG2	SF3B4
HMGA2	ENSG00000149948.9	5779.16120	8146.16780	-0.49530	21.35030	19.76010	HepG2	SLBP
HMGA2	ENSG00000149948.9	5367.77680	8842.92990	-0.72020	5.33150	4.23560	HepG2	SNRNP70
HMGA2	ENSG00000149948.9	6560.31050	10306.79320	-0.65180	31.82820	30.61320	HepG2	SRFBP1
HMGA2	ENSG00000149948.9	5661.68290	6327.55540	-0.16040	2.19790	1.76340	HepG2	SRSF1
HMGA2	ENSG00000149948.9	6743.70120	8551.39950	-0.34260	2.28610	1.38580	HepG2	SRSF3
HMGA2	ENSG00000149948.9	6443.95700	8388.59820	-0.38050	9.81170	8.72870	HepG2	SRSF5
HMGA2	ENSG00000149948.9	3773.08090	6652.87250	-0.81820	35.48310	33.56200	HepG2	SRSF7
HMGA2	ENSG00000149948.9	3895.30600	5147.91300	-0.40230	10.13920	9.19880	HepG2	SRSF9
HMGA2	ENSG00000149948.9	2741.91560	8948.76900	-1.70650	165.62640	163.38530	HepG2	SSB
HMGA2	ENSG00000149948.9	3138.87970	5799.17800	-0.88560	10.64120	8.43770	HepG2	STAU1
HMGA2	ENSG00000149948.9	7911.46150	9540.38540	-0.27010	6.95360	6.04570	HepG2	SUCLG1
HMGA2	ENSG00000149948.9	2119.41560	5862.59930	-1.46790	57.27110	53.86430	HepG2	SUPT6H
HMGA2	ENSG00000149948.9	1073.49380	5889.76400	-2.45590	89.64430	86.97900	HepG2	SUPV3L1
HMGA2	ENSG00000149948.9	7357.11990	5687.80670	0.37120	6.93520	6.11700	HepG2	TAF15
HMGA2	ENSG00000149948.9	6026.17200	7825.93500	-0.37700	4.12580	3.26230	HepG2	TARDBP
HMGA2	ENSG00000149948.9	2631.26080	3947.86210	-0.58530	5.90650	4.53510	HepG2	TFIP11
HMGA2	ENSG00000149948.9	4445.64290	7276.44920	-0.71080	18.69970	17.61210	HepG2	TIAL1
HMGA2	ENSG00000149948.9	9836.44000	6275.58010	0.64830	5.61160	3.56070	HepG2	TRA2A
HMGA2	ENSG00000149948.9	4481.47240	7341.59460	-0.71210	29.80540	28.19550	HepG2	TRIM56
HMGA2	ENSG00000149948.9	7159.68210	8300.16370	-0.21320	2.09830	1.34640	HepG2	TUFM
HMGA2	ENSG00000149948.9	5108.38140	7426.37340	-0.53980	7.22960	6.22010	HepG2	U2AF1
HMGA2	ENSG00000149948.9	5611.24990	8785.34330	-0.64680	8.89930	7.36220	HepG2	UBE2L3
HMGA2	ENSG00000149948.9	2464.35040	3479.44400	-0.49760	4.87740	3.86360	HepG2	UCHL5
HMGA2	ENSG00000149948.9	4332.03830	5980.83300	-0.46530	13.90310	12.56770	HepG2	UPF1
HMGA2	ENSG00000149948.9	2786.87910	5393.91130	-0.95270	10.43230	8.42510	HepG2	UPF2
HMGA2	ENSG00000149948.9	4824.67840	5774.24730	-0.25920	4.76000	4.00900	HepG2	UTP3
HMGA2	ENSG00000149948.9	2437.99140	3621.86360	-0.57100	4.44020	3.04070	HepG2	XPO5
HMGA2	ENSG00000149948.9	2793.15070	5797.81890	-1.05360	21.06370	19.14840	HepG2	XRN2
HMGA2	ENSG00000149948.9	4831.90960	6833.75440	-0.50010	19.64540	18.14470	HepG2	ZC3H8
HMGA2	ENSG00000149948.9	3780.40820	6577.76040	-0.79910	51.44810	49.85620	HepG2	ZNF622
HMGA2	ENSG00000149948.9	19.90760	1.48750	3.74230	3.20970	2.39800	K562	GRSF1
HMGA2	ENSG00000149948.9	13.51110	0.48020	4.81440	3.02030	2.39980	K562	HNRNPC
HMGA2	ENSG00000149948.9	2.09820	14.83370	-2.82170	2.34050	1.59490	K562	MTPAP
HMGA2	ENSG00000149948.9	1.78170	16.47880	-3.20930	2.92160	2.15830	K562	NSUN2
HMGA2	ENSG00000149948.9	93.54910	0.00000	99999.99990	24.01020	21.79100	K562	PRPF8
HMGA2	ENSG00000149948.9	0.48660	16.66380	-5.09790	4.36530	3.21730	K562	SRPK2
HMGA2	ENSG00000149948.9	3.34360	17.47300	-2.38570	2.31260	1.65200	K562	UPF1
HMGA2	ENSG00000149948.9	1.00420	14.95070	-3.89610	3.26990	2.32150	K562	WDR3
HMGA2	ENSG00000149948.9	1.99390	15.54960	-2.96320	2.80510	1.95320	K562	WDR43
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

HMGA2

General Information

Functions

Localization

Domains (AlphaFold: HMGA2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for HMGA2 is not avaliable on ENCORE database.

38 proteins are bound to HMGA2 RNA:

eCLIP assay for HMGA2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for HMGA2 is not available on ENCORE database.

128 RBPs can affect the gene expression of HMGA2 :

The Knockdown/knockout RNA-Seq assay for HMGA2 is not available on ENCORE database.

No RBPs affect the alternative splcing events of HMGA2 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for HMGA2 is not avaliable on ENCORE database.