CHAF1A

General Information

Gene Name       : CHAF1A
Gene ID             : ENSG00000167670.15
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: CHAF1A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CHAF1AENSG00000167670.1526.1420.8323.48ENCSR000AEF
HepG2CHAF1AENSG00000167670.1537.4430.9434.19ENCSR985KAT
K562CHAF1AENSG00000167670.1542.8630.4036.63ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CHAF1A is not avaliable on ENCORE database.



Proteins bound to RNA
  • CHAF1A RNA is bound by 24 proteins.  







eCLIP assay for CHAF1A is not avaliable on ENCORE database.





24 proteins are bound to CHAF1A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1944294414429472+3'-UTR,CDS3.518396.43326K562UCHL5
chr1944238034423836+3'-UTR,CDS4.186165.98894K562ZNF800
chr1944294414429486+3'-UTR,CDS3.781186.70085HepG2PPIG
chr1944286604428698+3'-UTR,CDS,intron-Proximal3.355996.12893K562BUD13
chr1944238044423858+3'-UTR,CDS3.692309.13691K562PUM1
chr1944431774443228+3'-UTR,intron-Distal5.8163112.65878K562PUM2
chr1944294384429489+3'-UTR,CDS4.457764.01763HepG2GRWD1
chr1944288864428932+3'-UTR,CDS,intron-Proximal5.792569.63974K562AQR
chr1944432524443378+3'-UTR,intron-Distal5.4450111.42666K562PUM2
chr1944233394423365+5'-UTR,CDS4.4633010.01989K562UCHL5
chr1944027354402811+5'-UTR,CDS3.388215.81979K562DDX6
chr1944233754423390+5'-UTR,CDS4.309434.67744K562BUD13
chr1944233404423371+5'-UTR,CDS5.229328.53277K562ZNF622
chr1944027344402812+5'-UTR,CDS,intron-Proximal5.373436.66103HepG2NCBP2
chr1944232524423341+5'-UTR,CDS,intron-Proximal5.5068210.31535HepG2QKI
chr1944026774402811+5'-UTR,CDS4.2458419.15008K562DDX3X
chr1944233654423390+5'-UTR,CDS4.5024710.38007K562UCHL5
chr1944233584423393+5'-UTR,CDS,intron-Proximal3.528416.70305K562ZNF800
chr1944233314423339+5'-UTR,CDS,intron-Proximal5.308889.35594K562UCHL5
chr1944026934402813+5'-UTR,CDS,intron-Proximal4.6467318.40927HepG2DDX3X
chr1944233264423394+5'-UTR,CDS,intron-Proximal4.104436.49379HepG2AQR
chr1944319694432030+CDS3.337508.07998HepG2PPIG
chr1944297824429889+CDS,intron-Distal,intron-Proximal3.745667.75444K562PRPF8
chr1944319484431969+CDS,intron-Proximal3.428865.22707K562GRWD1
chr1944305774430638+CDS3.2638310.18882K562GRWD1
chr1944297514429828+CDS,intron-Proximal4.281537.13970HepG2PRPF8
chr1944027714402808+CDS5.448119.54318K562UCHL5
chr1944305664430639+CDS,intron-Proximal4.1368413.42460HepG2BCLAF1
chr1944227044422776+CDS,intron-Distal4.4966312.74895K562ZNF622
chr1944305474430580+CDS5.548269.17286K562UCHL5
chr1944093514409415+CDS3.2102010.40226K562UCHL5
chr1944226914422795+CDS,intron-Distal,intron-Proximal4.931396.99355K562LIN28B
chr1944027964402926+CDS,intron-Distal,intron-Proximal4.856637.61488HepG2EFTUD2
chr1944305744430642+CDS,intron-Proximal3.047779.72191K562DDX24
chr1944226934422793+CDS,intron-Distal,intron-Proximal6.0904733.38014K562UCHL5
chr1944306034430619+CDS3.683589.05903K562UCHL5
chr1944094714409512+CDS3.397737.39639K562ZNF622
chr1944092134409254+CDS3.252985.94292K562ZNF622
chr1944319474431992+CDS,intron-Proximal4.641263.79347HepG2GRWD1
chr1944226774422790+CDS,intron-Distal3.5303317.25606K562ZNF800
chr1944226824422792+CDS,intron-Distal5.295659.32164K562TRA2A
chr1944227774422835+CDS,intron-Distal,intron-Proximal5.704037.36776HepG2PRPF8
chr1944332954433328+CDS4.319344.91614HepG2GRWD1
chr1944226004422679+CDS,intron-Distal5.1208212.19074K562UCHL5
chr1944297314429782+CDS3.407407.55782K562ZNF622
chr1944093974409443+CDS3.181735.95627K562RBM15
chr1944227084422787+CDS,intron-Distal3.121259.20212HepG2PPIG
chr1944225824422682+CDS,intron-Distal4.563536.02881K562TRA2A
chr1944297684429796+CDS,intron-Proximal5.3904223.89296K562AQR
chr1944093414409422+CDS3.729249.93243K562GRWD1
chr1944226294422647+CDS,intron-Distal4.054103.38968HepG2BCLAF1
chr1944227844422828+CDS,intron-Distal,intron-Proximal3.422563.96535HepG2AQR
chr1944305914430643+CDS,intron-Proximal3.824963.85588HepG2ZNF800
chr1944320184432035+CDS3.831033.86058K562GRWD1
chr1944296964429768+CDS,intron-Proximal3.574727.36655K562AQR
chr1944305904430635+CDS3.185346.13431K562ZNF800
chr1944297324429785+CDS4.9503014.07362K562UCHL5
chr1944180144418055+CDS,intron-Distal,intron-Proximal4.378834.59919HepG2AQR
chr1944330404433080+CDS,intron-Proximal5.085046.22530K562AQR
chr1944306194430639+CDS,intron-Proximal4.2295413.95379K562UCHL5
chr1944319504431975+CDS3.255566.21602K562ZNF622
chr1944305804430603+CDS4.3515410.22171K562UCHL5
chr1944093514409440+CDS3.263964.61994K562FMR1
chr1944305744430638+CDS3.2840810.97972K562ZNF622
chr1944306024430639+CDS,intron-Proximal3.5349816.45406HepG2PPIG
chr1944319484431977+CDS,intron-Proximal4.122556.84316HepG2BCLAF1
chr1944094704409529+CDS5.9789614.39302K562UCHL5
chr1944319474431980+CDS,intron-Proximal4.785808.08662K562DDX24
chr1944093314409397+CDS3.9784814.43422K562RBM15
chr1944305974430637+CDS5.090705.59408HepG2GRWD1
chr1944092894409311+CDS3.576624.22460K562RBM15
chr1944320104432061+CDS3.982175.94293HepG2BCLAF1
chr1944423274442335+CDS3.483403.90826K562ZNF622
chr1944305594430630+CDS3.347477.72651K562PUM1
chr1944319514431974+CDS3.260444.56061K562BUD13
chr1944094734409510+CDS4.195384.83285K562GRWD1
chr1944093264409431+CDS3.045833.17055HepG2EIF3H
chr1944319474431963+CDS,intron-Proximal4.049855.47926K562AQR
chr1944098414409883+intron-Distal,intron-Proximal4.647055.17013K562RBM15
chr1944214844421578+intron-Distal3.903313.72818HepG2ILF3
chr1944300484430097+intron-Distal3.263164.98411K562RBM15
chr1944229294422966+intron-Distal4.636115.51215K562RBM15
chr1944227934422834+intron-Distal,intron-Proximal4.395796.77156K562AQR
chr1944232284423292+intron-Distal,intron-Proximal3.855033.71397K562KHSRP
chr1944239234423985+intron-Distal,intron-Proximal3.029183.49653K562PRPF8
chr1944067624406856+intron-Distal4.025273.37208HepG2ILF3
chr1944298374429870+intron-Proximal4.172065.97994K562AQR
chr1944097594409800+intron-Proximal3.715486.32052K562AQR
chr1944238744423934+intron-Proximal4.708598.01338K562AQR
chr1944297984429834+intron-Proximal5.9836125.86760K562AQR
chr1944322354432247+intron-Proximal4.766338.01338K562AQR
chr1944028254402856+intron-Proximal5.643397.81430K562AQR
chr1944028324402872+intron-Proximal4.354224.75655HepG2PRPF8
chr1944322154432235+intron-Proximal4.725107.50107K562AQR
chr1944322044432215+intron-Proximal5.706368.34710K562AQR
chr1944233924423434+intron-Proximal3.619165.35619K562AQR
chr1944028114402825+intron-Proximal5.221835.17615K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CHAF1A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CHAF1A is not available on ENCORE database.

  • 128 RBPs can affect the levels of CHAF1A.  








The Knockdown/knockout RNA-Seq assay for CHAF1A is not available on ENCORE database.





128 RBPs can affect the gene expression of CHAF1A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CHAF1AENSG00000167670.11500.99730689.89030-0.461603.352102.17880HepG2AATF
CHAF1AENSG00000167670.11569.03640849.14600-0.577508.510807.56380HepG2ACO1
CHAF1AENSG00000167670.11737.58860521.952200.498803.757602.61720HepG2ADAR
CHAF1AENSG00000167670.11325.53520528.02230-0.697804.421703.77080HepG2AKAP1
CHAF1AENSG00000167670.11150.16110297.72700-0.987506.241604.71090HepG2AKAP8
CHAF1AENSG00000167670.11636.11230853.18600-0.423604.681003.70400HepG2AKAP8L
CHAF1AENSG00000167670.11131.00450436.86730-1.7376020.4399018.55940HepG2ASCC1
CHAF1AENSG00000167670.11556.079601102.67290-0.9876022.7120021.09010HepG2AUH
CHAF1AENSG00000167670.11324.08180643.71190-0.9901010.334408.74270HepG2BCLAF1
CHAF1AENSG00000167670.11126.362501070.71500-3.0829077.6329075.45920HepG2BOP1
CHAF1AENSG00000167670.11274.08450835.45440-1.6079034.2058032.12140HepG2CALR
CHAF1AENSG00000167670.11302.80940415.06270-0.454902.311001.59940HepG2CIRBP
CHAF1AENSG00000167670.11341.55840849.02210-1.3137035.6216033.85230HepG2CKAP4
CHAF1AENSG00000167670.11454.80430982.94740-1.1119016.3385014.83500HepG2CPSF6
CHAF1AENSG00000167670.11483.22400706.37370-0.547703.194201.69850HepG2CSTF2T
CHAF1AENSG00000167670.11689.76210961.13830-0.478605.341304.50060HepG2CELF1
CHAF1AENSG00000167670.11646.46410785.36630-0.280802.616801.80300HepG2DDX19B
CHAF1AENSG00000167670.11244.23110761.14340-1.6399030.8629028.96540HepG2DDX21
CHAF1AENSG00000167670.11354.63970744.84970-1.0706015.9878013.94280HepG2DDX24
CHAF1AENSG00000167670.11143.10360505.74780-1.8214023.9376022.28410HepG2DDX3X
CHAF1AENSG00000167670.11165.30280300.66100-0.863005.944204.09300HepG2DDX47
CHAF1AENSG00000167670.11335.65570728.50240-1.1180012.4962010.99930HepG2DDX55
CHAF1AENSG00000167670.11516.995201116.21800-1.110408.661906.98940HepG2DDX59
CHAF1AENSG00000167670.11452.11720814.17700-0.848609.822208.06180HepG2DDX5
CHAF1AENSG00000167670.11112.13290434.58360-1.9544022.1065020.58580HepG2DDX6
CHAF1AENSG00000167670.11321.40820506.91550-0.657305.351904.01760HepG2DHX30
CHAF1AENSG00000167670.11568.99310812.41830-0.513805.995905.07140HepG2DKC1
CHAF1AENSG00000167670.11326.39670525.56530-0.687204.991004.07230HepG2DNAJC21
CHAF1AENSG00000167670.11396.41980520.95930-0.394103.402402.69270HepG2DNAJC2
CHAF1AENSG00000167670.11619.98570815.06820-0.394702.366901.51190HepG2EEF2
CHAF1AENSG00000167670.11409.58470679.51460-0.730306.623304.90720HepG2EFTUD2
CHAF1AENSG00000167670.11257.25150700.91200-1.4461017.6844015.16590HepG2AGO1
CHAF1AENSG00000167670.1183.24330417.64100-2.3269030.0125028.19510HepG2EIF2S1
CHAF1AENSG00000167670.111046.77820818.993000.353902.622501.48870HepG2EIF2S2
CHAF1AENSG00000167670.11298.21100661.67390-1.1498012.9954011.19330HepG2EIF3D
CHAF1AENSG00000167670.11543.75550718.78530-0.402603.093501.95530HepG2EIF3G
CHAF1AENSG00000167670.11618.561101019.54990-0.7209011.6339010.15250HepG2EIF4G1
CHAF1AENSG00000167670.11595.64960976.63700-0.713407.475606.16500HepG2EIF4G2
CHAF1AENSG00000167670.11545.284601266.01530-1.2152034.4082032.71490HepG2ETF1
CHAF1AENSG00000167670.11648.70890829.82120-0.355202.629901.81520HepG2EWSR1
CHAF1AENSG00000167670.11430.80860591.33230-0.456903.565502.22160HepG2FAM120A
CHAF1AENSG00000167670.11442.85650725.34910-0.711807.792006.05580HepG2FASTKD2
CHAF1AENSG00000167670.11824.909301090.34850-0.402502.743601.97790HepG2FIP1L1
CHAF1AENSG00000167670.11571.40550984.68900-0.785203.001701.94220HepG2FTO
CHAF1AENSG00000167670.11966.54830465.808401.0530013.4962012.08910HepG2FXR1
CHAF1AENSG00000167670.11622.60520458.760900.440502.616301.75220HepG2G3BP2
CHAF1AENSG00000167670.11424.43040589.14110-0.473102.701401.81510HepG2GEMIN5
CHAF1AENSG00000167670.11430.322201114.17260-1.3725021.1685019.57500HepG2GPKOW
CHAF1AENSG00000167670.11282.24890530.60070-0.910708.513807.47140HepG2HNRNPA1
CHAF1AENSG00000167670.11523.44720949.70390-0.859409.576408.03630HepG2HNRNPA2B1
CHAF1AENSG00000167670.11401.53760590.20680-0.555703.979203.15860HepG2HNRNPC
CHAF1AENSG00000167670.11597.55910833.85090-0.480705.125004.18650HepG2HNRNPF
CHAF1AENSG00000167670.11344.683201063.28220-1.6252030.6792028.94950HepG2HNRNPLL
CHAF1AENSG00000167670.11579.68430821.11570-0.502304.583703.67160HepG2IGF2BP1
CHAF1AENSG00000167670.11140.05320439.08350-1.6485018.9329017.34500HepG2IGF2BP2
CHAF1AENSG00000167670.11288.35930175.255700.718303.671702.26660HepG2KHDRBS1
CHAF1AENSG00000167670.11404.50510605.68790-0.582404.185602.18840HepG2CCAR2
CHAF1AENSG00000167670.11645.71890776.26370-0.265602.335801.39790HepG2KIF1C
CHAF1AENSG00000167670.11762.252801324.62030-0.797207.596706.20530HepG2LARP4
CHAF1AENSG00000167670.11452.44730672.58550-0.572004.578402.42550HepG2LSM11
CHAF1AENSG00000167670.11695.50590465.971900.577704.090803.29530HepG2MAGOH
CHAF1AENSG00000167670.11715.65100468.547800.611004.161903.40300HepG2MATR3
CHAF1AENSG00000167670.11326.62110692.51570-1.084207.554005.90780HepG2METAP2
CHAF1AENSG00000167670.11512.20970882.24820-0.7845010.312708.85140HepG2MSI2
CHAF1AENSG00000167670.11722.641401084.57330-0.585803.598802.48460HepG2MTPAP
CHAF1AENSG00000167670.111263.194801024.615100.301903.010002.21530HepG2NOL12
CHAF1AENSG00000167670.11732.53860942.85740-0.364102.563501.84200HepG2NSUN2
CHAF1AENSG00000167670.1172.39300168.05040-1.215005.148603.90810HepG2PABPC1
CHAF1AENSG00000167670.11201.50660426.95840-1.083309.521408.19970HepG2PABPC4
CHAF1AENSG00000167670.11250.44540723.51210-1.530507.374405.75850HepG2PCBP2
CHAF1AENSG00000167670.11136.10080561.76870-2.0453031.4611029.21460HepG2PRPF8
CHAF1AENSG00000167670.11413.89940978.13250-1.2407021.9946020.52710HepG2PUF60
CHAF1AENSG00000167670.11814.780501038.38660-0.349902.276001.72770HepG2PUM1
CHAF1AENSG00000167670.11696.845001037.59350-0.574306.530505.51570HepG2PUM2
CHAF1AENSG00000167670.11414.83600697.89560-0.750502.960002.23220HepG2RAVER1
CHAF1AENSG00000167670.11739.506801108.87760-0.584504.358603.31280HepG2RBM15
CHAF1AENSG00000167670.11247.407301058.15470-2.0966066.9269065.05190HepG2RBM22
CHAF1AENSG00000167670.11296.96480177.579300.741703.611401.86990HepG2RBM47
CHAF1AENSG00000167670.11790.82470451.376300.8089011.4650010.50850HepG2NELFE
CHAF1AENSG00000167670.11784.80540420.343500.9007014.4052013.16760HepG2RECQL
CHAF1AENSG00000167670.11113.41960898.10390-2.9852075.7115073.37000HepG2RPLP0
CHAF1AENSG00000167670.11240.82070686.11280-1.510507.043505.58890HepG2RPS10
CHAF1AENSG00000167670.11224.76030643.82070-1.5183025.8291024.26520HepG2RPS19
CHAF1AENSG00000167670.11381.00870745.75940-0.9689011.9395010.37320HepG2RPS2
CHAF1AENSG00000167670.11117.01700555.68470-2.2475033.4561031.33540HepG2RRP9
CHAF1AENSG00000167670.11331.27500646.20150-0.9640010.708908.91400HepG2SERBP1
CHAF1AENSG00000167670.11782.794801252.97050-0.678605.427504.46410HepG2SF3A3
CHAF1AENSG00000167670.11460.180301052.39620-1.1934019.9218018.21540HepG2SF3B1
CHAF1AENSG00000167670.11452.762101170.99080-1.3709014.9527013.15280HepG2SNRNP70
CHAF1AENSG00000167670.11267.008501195.14700-2.1622090.6176088.78660HepG2SRFBP1
CHAF1AENSG00000167670.11790.25750440.765200.8422012.6893011.83660HepG2SRSF1
CHAF1AENSG00000167670.11719.736501132.50480-0.654005.151903.74760HepG2SRSF3
CHAF1AENSG00000167670.11758.91150965.83020-0.347803.191602.52710HepG2SRSF5
CHAF1AENSG00000167670.11343.24080819.19450-1.2550017.2151015.74250HepG2SRSF7
CHAF1AENSG00000167670.11180.36150358.56410-0.991308.302107.43760HepG2SRSF9
CHAF1AENSG00000167670.11697.847901037.67110-0.572409.105308.28000HepG2SSB
CHAF1AENSG00000167670.11473.79280728.08950-0.619903.755102.33120HepG2STAU1
CHAF1AENSG00000167670.11342.97630652.28470-0.927403.965302.51130HepG2SUB1
CHAF1AENSG00000167670.11155.36710326.98240-1.073507.056604.97650HepG2SUGP2
CHAF1AENSG00000167670.11576.56580736.07670-0.352402.647101.72570HepG2SUPT6H
CHAF1AENSG00000167670.1197.45410725.15140-2.8955058.2677056.02190HepG2SUPV3L1
CHAF1AENSG00000167670.11359.244201036.56940-1.5288029.6752027.78320HepG2TARDBP
CHAF1AENSG00000167670.11509.47790317.251000.683302.555001.52670HepG2TBRG4
CHAF1AENSG00000167670.11223.54740486.00610-1.1204011.023009.30060HepG2TFIP11
CHAF1AENSG00000167670.11192.79600569.66020-1.5630026.9382025.67430HepG2TIAL1
CHAF1AENSG00000167670.11470.10230574.79930-0.290102.087001.58410HepG2TRIM56
CHAF1AENSG00000167670.11559.57990932.60350-0.736908.114707.04050HepG2U2AF1
CHAF1AENSG00000167670.11285.52630943.09790-1.723803.557902.43540HepG2U2AF2
CHAF1AENSG00000167670.11345.698601111.19260-1.6845059.2320056.94350HepG2UPF1
CHAF1AENSG00000167670.11762.588501142.15560-0.582808.983607.22560HepG2UTP18
CHAF1AENSG00000167670.11728.816901072.81380-0.557808.613107.65070HepG2UTP3
CHAF1AENSG00000167670.11557.36150710.00510-0.349203.249302.53160HepG2ZC3H8
CHAF1AENSG00000167670.11177.416001222.10010-2.78420149.35270147.09410HepG2ZNF622
CHAF1AENSG00000167670.111674.377702145.17100-0.357505.563804.80280K562AGGF1
CHAF1AENSG00000167670.111754.154902232.13190-0.347603.206502.50260K562AKAP8L
CHAF1AENSG00000167670.111570.401402531.07410-0.688609.739308.74300K562AQR
CHAF1AENSG00000167670.112011.066802342.01410-0.219802.115701.32420K562ATP5C1
CHAF1AENSG00000167670.111486.635501860.99850-0.324002.378401.57570K562BOP1
CHAF1AENSG00000167670.111577.032601978.76340-0.327403.264102.41010K562CPSF6
CHAF1AENSG00000167670.111869.087801367.214200.451002.900201.58780K562EEF2
CHAF1AENSG00000167670.111343.383201000.757800.424705.268604.18670K562EIF3G
CHAF1AENSG00000167670.11946.903301421.14360-0.585805.592203.88530K562FKBP4
CHAF1AENSG00000167670.111538.565602013.36800-0.388003.504602.53880K562FMR1
CHAF1AENSG00000167670.111327.848701706.52110-0.362002.751201.83900K562FTO
CHAF1AENSG00000167670.111904.882201200.414600.6661013.9174012.66490K562FXR1
CHAF1AENSG00000167670.11490.85170754.45610-0.620104.120503.21710K562G3BP2
CHAF1AENSG00000167670.111336.073101889.22250-0.499805.744104.60390K562GPKOW
CHAF1AENSG00000167670.112241.825603162.88750-0.496606.963205.75670K562GRSF1
CHAF1AENSG00000167670.111855.575902776.16800-0.581207.663606.35810K562HSPD1
CHAF1AENSG00000167670.111869.922602368.90490-0.341202.933602.08120K562KIF1C
CHAF1AENSG00000167670.11842.207501613.18550-0.9377010.208308.28790K562KRR1
CHAF1AENSG00000167670.111546.361001222.063800.339502.971302.09960K562MAGOH
CHAF1AENSG00000167670.111712.214101219.511200.489505.952304.52870K562MATR3
CHAF1AENSG00000167670.111438.563001860.09160-0.370702.166601.40760K562NAA15
CHAF1AENSG00000167670.112439.979702841.26680-0.219703.968303.09410K562NSUN2
CHAF1AENSG00000167670.111953.889801187.347600.7185012.8402011.46470K562PTBP1
CHAF1AENSG00000167670.112962.797403672.05500-0.309602.572501.78640K562PUF60
CHAF1AENSG00000167670.111371.645902213.77480-0.690609.455008.50040K562PUS1
CHAF1AENSG00000167670.11458.46290719.89630-0.651003.280601.71570K562RAVER1
CHAF1AENSG00000167670.111775.580402156.89690-0.280703.001902.38900K562RBM15
CHAF1AENSG00000167670.112438.107502803.50760-0.201502.116401.39660K562SF3A3
CHAF1AENSG00000167670.111400.828401796.75260-0.359102.483001.56440K562SF3B1
CHAF1AENSG00000167670.111940.511701164.050700.7372013.0793011.54090K562SRSF1
CHAF1AENSG00000167670.111089.42440859.321500.342202.576901.56740K562SRSF4
CHAF1AENSG00000167670.111529.262201177.978500.376403.008002.27030K562TARDBP
CHAF1AENSG00000167670.111561.100201136.323900.458105.306804.12160K562TIA1
CHAF1AENSG00000167670.111468.889201115.348100.397103.450602.20290K562TRA2A
CHAF1AENSG00000167670.11542.03440731.58960-0.432702.537301.49610K562U2AF1
CHAF1AENSG00000167670.11469.87630755.48230-0.685108.095206.70860K562U2AF2
CHAF1AENSG00000167670.112616.103403012.65020-0.203602.684701.97660K562UPF1
CHAF1AENSG00000167670.111881.972002577.83810-0.453905.912404.60890K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CHAF1A is not available on ENCORE database.





13 RBPs can affect the splicing of CHAF1A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECHAF1AENSG00000167670.11chr19+4418016441807344088994409756442256244227920.079000.003760.06042includedK562SRSF1
SECHAF1AENSG00000167670.11chr19+4418016441807344088994409756442256244227920.092000.000680.09121includedK562MATR3
SECHAF1AENSG00000167670.11chr19+441801644180734408899440975644225624422792-0.198000.000010.00090excludedK562AKAP8L
SECHAF1AENSG00000167670.11chr19+4417995441812944094414409756442256244227920.339000.000520.00704includedK562AQR
SECHAF1AENSG00000167670.11chr19+4418016441807344088994409756442256244227920.126000.000010.00129includedK562FXR1
SECHAF1AENSG00000167670.11chr19+4418016441807344088994409756442256244227920.084000.000520.07054includedK562DROSHA
SECHAF1AENSG00000167670.11chr19+441801644180734408899440975644225624422792-0.149000.002770.03921excludedK562PUS1
SECHAF1AENSG00000167670.11chr19+440590844059594402658440281144088994409756-0.150000.005750.06921excludedK562PUS1
SECHAF1AENSG00000167670.11chr19+4418016441807344088994409756442256244227920.118000.000570.02994includedHepG2SFPQ
SECHAF1AENSG00000167670.11chr19+4418016441812944088994409756442256244227920.164000.001030.06471includedK562HNRNPL
SECHAF1AENSG00000167670.11chr19+441801644180734408899440975644225624422792-0.159000.000330.01155excludedK562RBM15
SECHAF1AENSG00000167670.11chr19+441801644180734408899440975644225624422792-0.139000.001970.04681excludedK562AGGF1
SECHAF1AENSG00000167670.11chr19+440590844059594402658440281144088994409756-0.171000.000490.01568excludedK562AGGF1
SECHAF1AENSG00000167670.11chr19+4418016441807344088994409756442256244227920.096000.000100.00662includedK562PTBP1
A5SSCHAF1AENSG00000167670.11chr19+4417995441812944179954418073442256244227920.079000.000770.03067longerK562PUS1
A5SSCHAF1AENSG00000167670.11chr19+441801644181294418016441807344225624422792-0.059000.000150.05029shorterK562FXR2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CHAF1A is not avaliable on ENCORE database.