ARF4

General Information

Gene Name       : ARF4
Gene ID             : ENSG00000168374.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ARF4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ARF4ENSG00000168374.10103.3690.5096.93ENCSR000AEF
HepG2ARF4ENSG00000168374.10201.03247.63224.33ENCSR985KAT
K562ARF4ENSG00000168374.1082.7095.1988.94ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ARF4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ARF4 RNA is bound by 14 proteins.  







eCLIP assay for ARF4 is not avaliable on ENCORE database.





14 proteins are bound to ARF4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr35755738857557435-3'-UTR,intron-Distal4.636015.07111HepG2UPF1
chr35755717557557263-3'-UTR,intron-Distal3.580784.49490HepG2TIAL1
chr35756134557561402-3'-UTR,CDS,intron-Distal,intron-Proximal3.509986.95343HepG2LIN28B
chr35755753857557645-3'-UTR,intron-Distal4.5952336.02596K562FAM120A
chr35755733457557396-3'-UTR,intron-Distal4.2115723.42484K562FAM120A
chr35755766157557697-3'-UTR,intron-Distal4.1488014.21634K562FAM120A
chr35755720057557304-3'-UTR,intron-Distal3.5516620.37615HepG2FUBP3
chr35755747057557489-3'-UTR,intron-Distal3.7990176.71779K562UPF1
chr35756136057561449-3'-UTR,CDS,intron-Distal,intron-Proximal5.193166.90654K562SF3B4
chr35756304157563066-3'-UTR,CDS,intron-Distal,intron-Proximal3.638794.08943HepG2LIN28B
chr35755750557557530-3'-UTR,intron-Distal3.4648834.02926K562UPF1
chr35756134957561386-3'-UTR,CDS,intron-Distal,intron-Proximal3.449114.25145K562LIN28B
chr35755743857557470-3'-UTR,intron-Distal3.9918073.02241K562UPF1
chr35756138657561401-3'-UTR,CDS,intron-Distal,intron-Proximal4.516434.48296K562LIN28B
chr35755733657557474-3'-UTR,intron-Distal3.547749.60713HepG2FAM120A
chr35755750957557537-3'-UTR,intron-Distal4.2708611.42766HepG2UPF1
chr35755742457557461-3'-UTR,intron-Distal3.7457312.20055K562TIA1
chr35755722257557271-3'-UTR,intron-Distal4.207788.41305K562TIA1
chr35755748957557505-3'-UTR,intron-Distal3.9329970.93029K562UPF1
chr35755746157557497-3'-UTR,intron-Distal4.9299316.57635K562TIA1
chr35755739657557535-3'-UTR,intron-Distal4.38938400.00000K562FAM120A
chr35756304857563127-3'-UTR,CDS,intron-Distal,intron-Proximal3.250123.57887K562U2AF2
chr35755743557557509-3'-UTR,intron-Distal5.3967433.83714HepG2UPF1
chr35755735257557438-3'-UTR,intron-Distal3.7767147.09956K562UPF1
chr35755754557557616-3'-UTR,intron-Distal4.683994.66293HepG2TIA1
chr35755755957557610-3'-UTR,intron-Distal3.567545.22258HepG2TIAL1
chr35758287757583020-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.975518.12409K562PCBP1
chr35755717457557200-3'-UTR,intron-Distal3.832226.71479HepG2FUBP3
chr35755781757557873-3'-UTR,intron-Distal3.501965.20401HepG2SUB1
chr35755749757557523-3'-UTR,intron-Distal3.879206.90098K562TIA1
chr35755755357557655-3'-UTR,intron-Distal3.4547710.20083HepG2FUBP3
chr35755744857557526-3'-UTR,intron-Distal3.399733.65873HepG2TIA1
chr35755729057557325-3'-UTR,intron-Distal4.5082612.15663K562FAM120A
chr35755757257557631-3'-UTR,intron-Distal4.176346.36332HepG2UPF1
chr35755753957557643-3'-UTR,intron-Distal3.9388613.87179K562TIA1
chr35755747457557506-3'-UTR,intron-Distal4.148098.07365HepG2FAM120A
chr35755729357557314-3'-UTR,intron-Distal3.510187.29435K562UPF1
chr35758298457583104-5'-UTR,intron-Distal,intron-Proximal4.5690125.01777K562DDX3X
chr35758299057583094-5'-UTR,intron-Distal,intron-Proximal5.584958.90399HepG2DDX3X
chr35758274857582819-5'-UTR,CDS,intron-Distal,intron-Proximal3.7178013.00209HepG2PRPF8
chr35757017457570243-CDS,intron-Distal,intron-Proximal3.996753.05889HepG2SF3B4
chr35756672457566849-intron-Distal3.628814.72319HepG2QKI
chr35756714057567202-intron-Distal4.1895211.27651HepG2QKI
chr35756679757566935-intron-Distal6.8298819.57000K562QKI
chr35756684957566911-intron-Distal5.4815512.54308HepG2QKI
chr35758163457581683-intron-Distal3.043723.26837HepG2HNRNPC
chr35757934357579390-intron-Distal3.941018.28561HepG2QKI
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ARF4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ARF4 is not available on ENCORE database.

  • 115 RBPs can affect the levels of ARF4.  








The Knockdown/knockout RNA-Seq assay for ARF4 is not available on ENCORE database.





115 RBPs can affect the gene expression of ARF4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ARF4ENSG00000168374.63689.674805173.32280-0.487605.033103.80200HepG2ABCF1
ARF4ENSG00000168374.61796.148004235.15660-1.2375029.9721027.36190HepG2ADAR
ARF4ENSG00000168374.64355.868806563.00510-0.591406.124905.36890HepG2AKAP1
ARF4ENSG00000168374.65620.775106258.32960-0.155001.968401.37230HepG2AUH
ARF4ENSG00000168374.62730.502403427.27290-0.327903.008902.38780HepG2BOP1
ARF4ENSG00000168374.64932.588904236.525500.219402.041401.37170HepG2CALR
ARF4ENSG00000168374.63063.730503989.79600-0.3810010.143309.03230HepG2CKAP4
ARF4ENSG00000168374.62786.544703690.92790-0.4055010.256308.85100HepG2DDX19B
ARF4ENSG00000168374.62961.322703818.18760-0.366607.195006.20020HepG2DKC1
ARF4ENSG00000168374.63754.201904264.65280-0.183901.970001.36550HepG2DNAJC21
ARF4ENSG00000168374.64141.039302875.254100.526206.022304.72430HepG2EIF3D
ARF4ENSG00000168374.63774.587805737.55700-0.604106.340305.37680HepG2EIF4A3
ARF4ENSG00000168374.63479.845004481.42170-0.364903.662502.41710HepG2ESF1
ARF4ENSG00000168374.65339.061107185.38730-0.4285011.0947010.02130HepG2ETF1
ARF4ENSG00000168374.64084.145003284.545100.314202.983101.79890HepG2FASTKD2
ARF4ENSG00000168374.63938.422905370.00970-0.447303.992103.20090HepG2G3BP1
ARF4ENSG00000168374.64136.160105700.79210-0.462904.917403.71980HepG2G3BP2
ARF4ENSG00000168374.62899.645603566.91990-0.298801.961701.41680HepG2GPKOW
ARF4ENSG00000168374.62547.841203881.96950-0.607504.620203.19160HepG2GRSF1
ARF4ENSG00000168374.63571.565604305.50790-0.269602.598301.97010HepG2HNRNPA1
ARF4ENSG00000168374.66461.752705602.291400.205802.944101.98390HepG2HNRNPA2B1
ARF4ENSG00000168374.62997.636804789.03960-0.6759012.1266010.76740HepG2HNRNPC
ARF4ENSG00000168374.64514.052305195.77850-0.202902.673301.96700HepG2HNRNPF
ARF4ENSG00000168374.64826.293305552.84260-0.202303.850003.06380HepG2HNRNPL
ARF4ENSG00000168374.63016.746504757.38040-0.6572023.2730021.64840HepG2HNRNPU
ARF4ENSG00000168374.63996.020405458.54160-0.450004.486703.64470HepG2IGF2BP2
ARF4ENSG00000168374.63359.778605490.27780-0.708507.214805.51350HepG2KHSRP
ARF4ENSG00000168374.63055.326203648.05210-0.255804.916603.56270HepG2KIF1C
ARF4ENSG00000168374.67282.201205784.697200.332002.031401.32850HepG2LARP4
ARF4ENSG00000168374.64256.999605790.73920-0.443904.251103.44150HepG2MAGOH
ARF4ENSG00000168374.63359.507605823.18760-0.7936010.799809.61270HepG2MATR3
ARF4ENSG00000168374.65681.967004227.830700.426405.934704.79110HepG2MSI2
ARF4ENSG00000168374.64780.302905960.38740-0.318302.347601.76220HepG2NCBP2
ARF4ENSG00000168374.64913.857506044.64120-0.298804.019503.10100HepG2NOL12
ARF4ENSG00000168374.62474.115503018.16060-0.286802.283501.60150HepG2NSUN2
ARF4ENSG00000168374.66883.125203832.754200.844606.625005.20580HepG2PABPC1
ARF4ENSG00000168374.63658.266605308.25650-0.537105.847704.81230HepG2PABPC4
ARF4ENSG00000168374.63223.988104243.21050-0.396306.957705.82880HepG2PPIL4
ARF4ENSG00000168374.62197.725003595.86160-0.7103022.9718021.12940HepG2PRPF4
ARF4ENSG00000168374.64974.477305606.14980-0.172502.082801.59550HepG2PTBP1
ARF4ENSG00000168374.64728.039405770.15320-0.287402.896702.28860HepG2PUF60
ARF4ENSG00000168374.64428.897306125.28890-0.4678018.4244017.16880HepG2PUM1
ARF4ENSG00000168374.64523.870906071.69070-0.424507.860206.88940HepG2QKI
ARF4ENSG00000168374.66696.855203918.602400.773005.690104.70190HepG2RAVER1
ARF4ENSG00000168374.63997.350905148.58570-0.365105.390804.24130HepG2RBM15
ARF4ENSG00000168374.63041.677106005.65680-0.9815041.3453039.80670HepG2RBM22
ARF4ENSG00000168374.63547.067206239.14240-0.8147035.9059034.42990HepG2NELFE
ARF4ENSG00000168374.63624.451405810.84810-0.6810026.1982024.64430HepG2RECQL
ARF4ENSG00000168374.63460.147705597.09220-0.6938012.7512011.47580HepG2RPLP0
ARF4ENSG00000168374.62306.088002797.67040-0.278802.508701.92070HepG2RPS19
ARF4ENSG00000168374.63162.337003924.05290-0.311402.396101.64680HepG2RPS2
ARF4ENSG00000168374.63935.502402808.022200.486905.704204.36620HepG2SERBP1
ARF4ENSG00000168374.61537.357402870.44540-0.900802.731701.39050HepG2SF1
ARF4ENSG00000168374.62545.627503369.33550-0.404404.094303.25200HepG2SF3B1
ARF4ENSG00000168374.64147.231605836.80300-0.4930014.4476013.25980HepG2SF3B4
ARF4ENSG00000168374.63936.246004940.72920-0.327909.253708.18810HepG2SMN1
ARF4ENSG00000168374.65286.194303748.946700.495603.158602.32170HepG2SNRNP70
ARF4ENSG00000168374.65286.840306783.17290-0.359609.699508.91760HepG2SRFBP1
ARF4ENSG00000168374.64204.621605697.20560-0.4383011.2671010.11790HepG2SRSF5
ARF4ENSG00000168374.64507.932505104.67280-0.179402.299301.66020HepG2SRSF7
ARF4ENSG00000168374.63840.081004956.40530-0.368208.765407.88100HepG2SRSF9
ARF4ENSG00000168374.62152.039703662.16130-0.767008.077606.09680HepG2STIP1
ARF4ENSG00000168374.65518.840406479.27540-0.231504.678303.90690HepG2SUCLG1
ARF4ENSG00000168374.64589.350303527.384300.379604.577703.38480HepG2SUPT6H
ARF4ENSG00000168374.62524.633305475.93340-1.1170049.8901047.89760HepG2TAF15
ARF4ENSG00000168374.63198.134204622.84110-0.5315010.295609.43770HepG2TIAL1
ARF4ENSG00000168374.63346.998404468.64460-0.417004.494803.70370HepG2U2AF1
ARF4ENSG00000168374.64126.989105966.92870-0.531905.579604.36590HepG2UBE2L3
ARF4ENSG00000168374.63662.125004305.62390-0.233503.164302.05220HepG2UTP18
ARF4ENSG00000168374.63615.681704044.20980-0.161602.046501.51550HepG2UTP3
ARF4ENSG00000168374.62829.910704137.66820-0.548105.565704.54940HepG2XRN2
ARF4ENSG00000168374.65515.163604606.976800.259506.133005.40200HepG2ZNF622
ARF4ENSG00000168374.67751.903604648.359600.7377033.3798031.48950K562AGGF1
ARF4ENSG00000168374.67710.688805108.035700.5940010.070507.89730K562AKAP8
ARF4ENSG00000168374.68910.840204836.875900.8814021.2986019.14840K562AKAP8L
ARF4ENSG00000168374.66876.379104031.217400.7703014.1086012.92720K562AQR
ARF4ENSG00000168374.67307.818805075.136000.5259012.7574010.62260K562ATP5C1
ARF4ENSG00000168374.63154.244702193.358400.524104.216703.13240K562BOP1
ARF4ENSG00000168374.66586.471605554.891800.245602.910601.69670K562CCDC124
ARF4ENSG00000168374.64727.321703359.714100.492606.332304.44540K562CIRBP
ARF4ENSG00000168374.63746.007402905.624400.366403.079601.97650K562DDX3X
ARF4ENSG00000168374.64157.436703644.553600.189902.359601.75050K562DDX47
ARF4ENSG00000168374.61168.397301611.44290-0.463803.233501.78300K562DHX30
ARF4ENSG00000168374.66800.348605204.529900.385707.813106.20800K562DKC1
ARF4ENSG00000168374.62606.997101649.819700.660007.207905.41580K562EIF3D
ARF4ENSG00000168374.63681.075704575.66270-0.313905.197203.92820K562EIF4G2
ARF4ENSG00000168374.63123.037302359.030700.404704.790602.61780K562FASTKD2
ARF4ENSG00000168374.63429.165302381.636200.525806.996805.59150K562FIP1L1
ARF4ENSG00000168374.63361.311901949.407000.785905.444603.50040K562FUS
ARF4ENSG00000168374.62294.969703157.16990-0.460202.776902.17070K562FXR1
ARF4ENSG00000168374.63948.311302996.977600.397604.768802.83840K562G3BP1
ARF4ENSG00000168374.64358.770302226.718000.9689016.1791014.20650K562GPKOW
ARF4ENSG00000168374.66750.595003236.127101.060604.614102.91240K562HNRNPA2B1
ARF4ENSG00000168374.63063.418902214.062000.468306.389005.51860K562HNRNPC
ARF4ENSG00000168374.64669.322103228.747300.532107.156005.88870K562HSPD1
ARF4ENSG00000168374.63950.506003134.302000.333802.270001.36670K562IGF2BP2
ARF4ENSG00000168374.67288.686905132.969300.505808.529606.87220K562KIF1C
ARF4ENSG00000168374.62877.476202144.504600.424104.641702.77320K562LARP7
ARF4ENSG00000168374.62215.570003294.48960-0.572408.951407.38970K562MAGOH
ARF4ENSG00000168374.67297.186104913.648400.570409.745607.33530K562MAK16
ARF4ENSG00000168374.62152.998303287.87630-0.6108010.485908.58610K562MATR3
ARF4ENSG00000168374.63289.283402173.511700.597607.599906.11340K562METAP2
ARF4ENSG00000168374.67625.506004877.091400.6447010.631808.53620K562MSI2
ARF4ENSG00000168374.62004.606102533.40280-0.337802.691301.89300K562MTPAP
ARF4ENSG00000168374.67325.133604030.519900.8618010.921608.73260K562NAA15
ARF4ENSG00000168374.64715.776103031.225300.6375010.512808.17240K562NCBP2
ARF4ENSG00000168374.62697.104402161.733500.319102.992201.50150K562PHF6
ARF4ENSG00000168374.63616.991502703.880800.419704.436203.36200K562PPIG
ARF4ENSG00000168374.62559.686501499.108500.7718012.2433010.65920K562PRPF8
ARF4ENSG00000168374.66376.198104992.304700.352903.743602.79790K562PUF60
ARF4ENSG00000168374.611376.472904796.517701.2459037.4712035.41320K562PUS1
ARF4ENSG00000168374.65421.471003467.797500.644604.548802.66220K562RAVER1
ARF4ENSG00000168374.67954.178104673.762300.7670015.1968013.79050K562RBM15
ARF4ENSG00000168374.62542.355303069.40690-0.271802.170701.43060K562RBM22
ARF4ENSG00000168374.62217.121301811.433600.291502.856201.84940K562RCC2
ARF4ENSG00000168374.62403.829903230.00090-0.426203.971402.62950K562NELFE
ARF4ENSG00000168374.62630.640502171.689000.276504.059702.15580K562RPS10
ARF4ENSG00000168374.62157.285701527.281500.498204.631203.57290K562RPS19
ARF4ENSG00000168374.62912.353103843.13520-0.400103.678702.50310K562RPS3
ARF4ENSG00000168374.62039.994201533.070500.412002.725101.40660K562RRP9
ARF4ENSG00000168374.62012.162101283.046700.649105.100802.98940K562SERBP1
ARF4ENSG00000168374.64712.160902585.923800.865602.637001.47620K562SF1
ARF4ENSG00000168374.63523.398902777.542900.343105.471404.35210K562SF3A3
ARF4ENSG00000168374.64858.549303777.204700.363103.091602.18520K562SF3B4
ARF4ENSG00000168374.65490.818502971.469600.885702.853701.60190K562SNRNP200
ARF4ENSG00000168374.62638.150003710.26560-0.492007.301505.46490K562SRSF4
ARF4ENSG00000168374.62894.127602274.519800.347504.937203.14800K562SSB
ARF4ENSG00000168374.63766.212202857.684800.398203.661602.18730K562STAU1
ARF4ENSG00000168374.61632.284102630.30400-0.688303.265701.48260K562STIP1
ARF4ENSG00000168374.65305.323004355.790700.284403.358001.70410K562SUCLG1
ARF4ENSG00000168374.68977.101203553.179501.337007.442904.77680K562SUPT6H
ARF4ENSG00000168374.62585.192103175.73810-0.296802.318101.66740K562TARDBP
ARF4ENSG00000168374.62845.559202028.714000.488005.896804.39920K562TRIM56
ARF4ENSG00000168374.63636.262602663.296900.449109.926207.50800K562TROVE2
ARF4ENSG00000168374.65884.935403520.585800.741109.671307.44940K562U2AF1
ARF4ENSG00000168374.65474.938903637.008300.590008.808207.36620K562U2AF2
ARF4ENSG00000168374.62498.358001536.462900.701309.976507.99670K562UCHL5
ARF4ENSG00000168374.66200.095202984.600801.0547062.6585059.94970K562UPF1
ARF4ENSG00000168374.68693.787304863.508900.837905.675203.62900K562UTP18
ARF4ENSG00000168374.63468.959902553.824500.441703.016602.10480K562WDR3
ARF4ENSG00000168374.63124.131902655.709800.234302.573501.75500K562WDR43
ARF4ENSG00000168374.67026.778804777.987300.556405.781103.91520K562WRN
ARF4ENSG00000168374.66884.197103495.710400.977603.602701.68500K562YTHDC2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ARF4 is not available on ENCORE database.





10 RBPs can affect the splicing of ARF4 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEARF4ENSG00000168374.6chr3-575696245756975957563042575631145757011057570235-0.056000.000000.00001excludedK562AQR
SEARF4ENSG00000168374.6chr3-5758280057582950575701105757019157583058575832350.099000.000210.09662includedK562ABCF1
SEARF4ENSG00000168374.6chr3-575630425756309557561274575614005756962457569759-0.052000.000000.00008excludedHepG2SF3B4
A3SSARF4ENSG00000168374.6chr3-5756962457569860575696245756973457570110575702850.062000.000000.00000longerK562AQR
MXEARF4ENSG00000168374.6chr3-5756304257563095575696245756973457561349575614005757011057570191-0.111000.001320.036092includedHepG2MATR3
MXEARF4ENSG00000168374.6chr3-57563042575631145756962457569734575612745756140057570110575701910.106000.000070.002551includedK562DROSHA
MXEARF4ENSG00000168374.6chr3-57563042575631615756962457569759575612745756140057570110575701910.068000.000000.000001includedK562AQR
MXEARF4ENSG00000168374.6chr3-57563042575630955756962457569759575612745756140057570110575701910.073000.000000.000001includedK562AQR
MXEARF4ENSG00000168374.6chr3-57563042575631145756962457569759575612745756140057570110575701910.057000.000000.000001includedK562AQR
MXEARF4ENSG00000168374.6chr3-57561274575614005757011057570191575570895755802557582800575831350.104000.000360.023811includedHepG2BCCIP
MXEARF4ENSG00000168374.6chr3-57563042575631145756962457569734575612745756140057570110575701910.095000.000100.007521includedK562SBDS
MXEARF4ENSG00000168374.6chr3-5756304257563114575696245756973457561274575614005757011057570191-0.122000.000060.004072includedK562DDX55
MXEARF4ENSG00000168374.6chr3-57561274575614005756304257563114575570895755802557569624575697340.173000.000030.001491includedK562SUPV3L1
MXEARF4ENSG00000168374.6chr3-57561274575614005756304257563114575571245755802557582800575830610.063000.001490.033331includedK562SUPV3L1
MXEARF4ENSG00000168374.6chr3-57563042575631145756962457569734575612745756140057570110575701910.076000.003830.053831includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ARF4 is not avaliable on ENCORE database.