APOA1

General Information

Gene Name       : APOA1
Gene ID             : ENSG00000118137.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: APOA1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878APOA1ENSG00000118137.90.000.000.00ENCSR000AEF
HepG2APOA1ENSG00000118137.92038.561386.311712.43ENCSR985KAT
K562APOA1ENSG00000118137.90.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for APOA1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • APOA1 RNA is bound by 13 proteins.  







eCLIP assay for APOA1 is not avaliable on ENCORE database.





13 proteins are bound to APOA1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr11116706513116706523-3'-UTR,intron-Distal4.0551279.71534HepG2RPS3
chr11116706494116706538-3'-UTR,CDS,intron-Distal3.2392741.51760HepG2PCBP1
chr11116706491116706517-3'-UTR,intron-Distal3.59669400.00000HepG2LARP4
chr11116706517116706528-3'-UTR,CDS,intron-Distal3.48353400.00000HepG2LARP4
chr11116708097116708119-5'-UTR,CDS,intron-Distal4.43557400.00000HepG2DDX3X
chr11116708277116708314-5'-UTR,intron-Distal,intron-Proximal3.5667434.94131HepG2PRPF8
chr11116708131116708148-5'-UTR,CDS,intron-Distal,intron-Proximal5.3742317.84946HepG2AQR
chr11116708060116708107-5'-UTR,CDS,intron-Distal,intron-Proximal5.814995.95500K562AATF
chr11116708320116708331-5'-UTR,intron-Distal,intron-Proximal4.27913400.00000HepG2DDX3X
chr11116708120116708123-5'-UTR,CDS,intron-Distal4.38997400.00000HepG2DDX3X
chr11116708101116708131-5'-UTR,CDS,intron-Distal,intron-Proximal5.2973827.12074HepG2AQR
chr11116708284116708320-5'-UTR,intron-Distal,intron-Proximal5.5203726.76952HepG2AQR
chr11116708060116708077-CDS,intron-Distal,intron-Proximal5.57356400.00000HepG2DDX3X
chr11116706580116706595-CDS,intron-Distal3.82608400.00000HepG2LARP4
chr11116708060116708087-CDS,intron-Distal,intron-Proximal3.1945829.74304HepG2PCBP1
chr11116706694116706719-CDS,intron-Distal5.58101400.00000HepG2RPS3
chr11116708077116708088-CDS,intron-Distal5.02376400.00000HepG2RPS3
chr11116707870116707873-CDS,intron-Distal5.34786400.00000HepG2RPS3
chr11116706890116706904-CDS,intron-Distal5.38145400.00000HepG2SND1
chr11116706856116706882-CDS,intron-Distal5.40706400.00000HepG2SND1
chr11116707843116707870-CDS,intron-Distal5.12119400.00000HepG2DDX3X
chr11116706709116706715-CDS,intron-Distal5.34128400.00000HepG2SND1
chr11116707817116707824-CDS,intron-Distal3.86738400.00000HepG2LARP4
chr11116708062116708077-CDS,intron-Distal5.16562400.00000HepG2RPS3
chr11116706685116706694-CDS,intron-Distal3.62911400.00000HepG2LARP4
chr11116706736116706762-CDS,intron-Distal5.74179400.00000HepG2SND1
chr11116706722116706729-CDS,intron-Distal3.10724400.00000HepG2LARP4
chr11116706533116706561-CDS,intron-Distal3.71514400.00000HepG2LARP4
chr11116706936116706970-CDS,intron-Distal3.22756400.00000HepG2G3BP1
chr11116706940116706986-CDS,intron-Distal3.1119343.04898HepG2NOL12
chr11116707844116707849-CDS,intron-Distal3.30784400.00000HepG2LARP4
chr11116707800116707874-CDS,intron-Distal,intron-Proximal6.135046.73488K562AATF
chr11116706717116706722-CDS,intron-Distal3.09057400.00000HepG2LARP4
chr11116706870116706921-CDS,intron-Distal3.0761646.98978HepG2SDAD1
chr11116706595116706603-CDS,intron-Distal3.18641400.00000HepG2LARP4
chr11116707855116707893-CDS,intron-Distal,intron-Proximal3.7733023.00094HepG2AQR
chr11116706968116706973-CDS,intron-Distal3.54184400.00000HepG2LARP4
chr11116706573116706580-CDS,intron-Distal3.90936400.00000HepG2LARP4
chr11116707737116707745-CDS,intron-Distal4.40633400.00000HepG2RPS3
chr11116706770116706790-CDS,intron-Distal5.24063400.00000HepG2SND1
chr11116706672116706692-CDS,intron-Distal4.97209400.00000HepG2SND1
chr11116707870116707873-CDS,intron-Distal5.52852400.00000HepG2DDX3X
chr11116707084116707100-CDS,intron-Distal5.12014400.00000HepG2SND1
chr11116706973116707021-CDS,intron-Distal3.67318400.00000HepG2LARP4
chr11116708027116708081-CDS,intron-Distal,intron-Proximal3.6505123.10098HepG2AQR
chr11116707813116707817-CDS,intron-Distal3.50979400.00000HepG2LARP4
chr11116708060116708062-CDS,intron-Distal,intron-Proximal5.27508400.00000HepG2RPS3
chr11116707818116707844-CDS,intron-Distal5.06175400.00000HepG2RPS3
chr11116706580116706630-CDS,intron-Distal5.01442400.00000HepG2SND1
chr11116706791116706805-CDS,intron-Distal5.51737400.00000HepG2SND1
chr11116706942116706968-CDS,intron-Distal5.32637400.00000HepG2SND1
chr11116706704116706709-CDS,intron-Distal5.30591400.00000HepG2SND1
chr11116707856116707870-CDS,intron-Distal5.18678400.00000HepG2RPS3
chr11116707800116707813-CDS,intron-Distal3.34470400.00000HepG2LARP4
chr11116706709116706717-CDS,intron-Distal3.54105400.00000HepG2LARP4
chr11116706882116706890-CDS,intron-Distal5.41867400.00000HepG2SND1
chr11116706951116706977-CDS,intron-Distal4.91569400.00000HepG2RPS3
chr11116706877116706921-CDS,intron-Distal4.90741400.00000HepG2RPS3
chr11116707833116707844-CDS,intron-Distal3.81348400.00000HepG2LARP4
chr11116707079116707084-CDS,intron-Distal4.87068400.00000HepG2SND1
chr11116707824116707833-CDS,intron-Distal3.93850400.00000HepG2LARP4
chr11116706942116706968-CDS,intron-Distal3.79026400.00000HepG2LARP4
chr11116706797116706821-CDS,intron-Distal3.13967400.00000HepG2LARP4
chr11116707803116707818-CDS,intron-Distal5.43944400.00000HepG2RPS3
chr11116706729116706735-CDS,intron-Distal3.04851400.00000HepG2LARP4
chr11116706630116706639-CDS,intron-Distal4.61417400.00000HepG2SND1
chr11116707100116707114-CDS,intron-Distal5.02983400.00000HepG2SND1
chr11116707064116707151-CDS,intron-Distal3.3169932.70954HepG2AQR
chr11116707067116707079-CDS,intron-Distal5.02869400.00000HepG2SND1
chr11116706986116707031-CDS,intron-Distal3.0487842.95880HepG2NOL12
chr11116706885116706929-CDS,intron-Distal3.70451400.00000HepG2LARP4
chr11116707847116707873-CDS,intron-Distal3.1857835.60974HepG2PCBP1
chr11116706721116706764-CDS,intron-Distal5.61187400.00000HepG2RPS3
chr11116706970116706980-CDS,intron-Distal3.73527400.00000HepG2G3BP1
chr11116707844116707856-CDS,intron-Distal4.57373400.00000HepG2RPS3
chr11116706702116706709-CDS,intron-Distal3.60605400.00000HepG2LARP4
chr11116707776116707803-CDS,intron-Distal5.17009400.00000HepG2RPS3
chr11116706805116706813-CDS,intron-Distal5.57483400.00000HepG2SND1
chr11116706696116706702-CDS,intron-Distal3.64765400.00000HepG2LARP4
chr11116706814116706847-CDS,intron-Distal5.50792400.00000HepG2SND1
chr11116706956116707002-CDS,intron-Distal3.2730157.00526HepG2SDAD1
chr11116706847116706856-CDS,intron-Distal5.24924400.00000HepG2SND1
chr11116706678116706685-CDS,intron-Distal3.32687400.00000HepG2LARP4
chr11116707038116707067-CDS,intron-Distal5.27782400.00000HepG2SND1
chr11116707805116707855-CDS,intron-Distal3.4967824.38229HepG2AQR
chr11116707691116707719-CDS,intron-Distal,intron-Proximal4.5317320.66144HepG2AQR
chr11116706692116706704-CDS,intron-Distal5.31661400.00000HepG2SND1
chr11116707054116707081-CDS,intron-Distal4.60830400.00000HepG2RPS3
chr11116706642116706661-CDS,intron-Distal3.24842400.00000HepG2LARP4
chr11116707081116707114-CDS,intron-Distal5.08377400.00000HepG2RPS3
chr11116707857116707861-CDS,intron-Distal3.10905400.00000HepG2LARP4
chr11116707784116707833-CDS,intron-Distal3.70717400.00000HepG2DDX3X
chr11116706639116706672-CDS,intron-Distal4.96603400.00000HepG2SND1
chr11116708083116708097-CDS,intron-Distal4.57049400.00000HepG2DDX3X
chr11116706561116706573-CDS,intron-Distal3.94241400.00000HepG2LARP4
chr11116706752116706770-CDS,intron-Distal3.03972400.00000HepG2LARP4
chr11116706977116707027-CDS,intron-Distal4.88672400.00000HepG2RPS3
chr11116706762116706770-CDS,intron-Distal5.50665400.00000HepG2SND1
chr11116706904116706935-CDS,intron-Distal5.54457400.00000HepG2SND1
chr11116706715116706736-CDS,intron-Distal5.76712400.00000HepG2SND1
chr11116708077116708083-CDS,intron-Distal5.50933400.00000HepG2DDX3X
chr11116706980116707020-CDS,intron-Distal5.04631400.00000HepG2SND1
chr11116706973116706979-CDS,intron-Distal5.05342400.00000HepG2SND1
chr11116707833116707843-CDS,intron-Distal3.48624400.00000HepG2DDX3X
chr11116706968116706973-CDS,intron-Distal5.14212400.00000HepG2SND1
chr11116707849116707857-CDS,intron-Distal3.24308400.00000HepG2LARP4
chr11116707767116707800-CDS,intron-Distal3.23944400.00000HepG2LARP4
chr11116707144116707164-intron-Distal3.8470017.39253HepG2SF3A3
chr11116707677116707691-intron-Distal,intron-Proximal6.9165727.33977HepG2AQR
chr11116707673116707689-intron-Distal,intron-Proximal3.7375813.26607HepG2PRPF8
chr11116708042116708054-intron-Distal,intron-Proximal5.3328225.22330HepG2PRPF8
chr11116707131116707178-intron-Distal4.8287014.03953HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for APOA1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for APOA1 is not available on ENCORE database.

  • 135 RBPs can affect the levels of APOA1.  








The Knockdown/knockout RNA-Seq assay for APOA1 is not available on ENCORE database.





135 RBPs can affect the gene expression of APOA1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
APOA1ENSG00000118137.59245.7373022222.01730-1.2651039.5051036.39880HepG2AATF
APOA1ENSG00000118137.545730.3645028725.988500.670704.173303.03250HepG2ABCF1
APOA1ENSG00000118137.520399.6591037927.36510-0.8947010.863309.82400HepG2ACO1
APOA1ENSG00000118137.530924.8280013152.745901.2333034.3761031.59760HepG2ADAR
APOA1ENSG00000118137.59613.57060100312.63160-3.38330162.14670159.27620HepG2AKAP1
APOA1ENSG00000118137.545786.8272038942.374100.233504.066403.26410HepG2AUH
APOA1ENSG00000118137.532083.2442020956.121500.614306.269104.83370HepG2BCCIP
APOA1ENSG00000118137.542720.3232018207.097401.2303027.4291025.12070HepG2BCLAF1
APOA1ENSG00000118137.524771.555907786.413601.6696071.0917068.96980HepG2BOP1
APOA1ENSG00000118137.532958.8402021509.015800.615604.226502.72480HepG2BUD13
APOA1ENSG00000118137.5144178.5062078854.428000.8705017.6677015.92540HepG2CIRBP
APOA1ENSG00000118137.510385.9824019462.00160-0.906003.189202.36430HepG2CNOT7
APOA1ENSG00000118137.521897.343707147.992101.6150061.2226058.69760HepG2CPSF6
APOA1ENSG00000118137.517374.3190013487.920000.365204.977803.61310HepG2YBX3
APOA1ENSG00000118137.520682.6877012941.397700.6763011.045809.13630HepG2CSTF2
APOA1ENSG00000118137.514858.1417022759.66420-0.615202.699401.36750HepG2CSTF2T
APOA1ENSG00000118137.535293.9954029060.199800.280302.745202.10430HepG2CELF1
APOA1ENSG00000118137.540585.6086031242.166200.3774012.7825011.38290HepG2DAZAP1
APOA1ENSG00000118137.544253.1317035074.159700.335302.945302.08670HepG2DDX19B
APOA1ENSG00000118137.516344.8167013506.838600.275004.477503.02130HepG2DDX1
APOA1ENSG00000118137.537386.4706024501.407700.609606.028705.07160HepG2DDX21
APOA1ENSG00000118137.536858.3148023989.956000.6195010.580408.83960HepG2DDX24
APOA1ENSG00000118137.566196.3260096086.59780-0.537606.555505.63520HepG2DDX3X
APOA1ENSG00000118137.524862.3968016959.852700.551708.723906.57740HepG2DDX47
APOA1ENSG00000118137.533340.6098019850.267300.748004.207102.96780HepG2DDX5
APOA1ENSG00000118137.525131.2921012774.038400.9762026.9965024.57810HepG2DHX30
APOA1ENSG00000118137.592775.0522036284.399601.3543051.4119049.45410HepG2DKC1
APOA1ENSG00000118137.525887.4190013244.267300.9668048.1566045.73830HepG2DNAJC21
APOA1ENSG00000118137.515125.7958013127.112000.204404.595603.79130HepG2DNAJC2
APOA1ENSG00000118137.525534.6385019242.494400.408104.500803.35220HepG2EEF2
APOA1ENSG00000118137.510244.8718015619.35860-0.608407.982406.52070HepG2EIF3D
APOA1ENSG00000118137.543030.1259023146.591000.8944011.728909.82710HepG2EIF3G
APOA1ENSG00000118137.5121426.8034087682.499700.469604.302503.50900HepG2EIF4A3
APOA1ENSG00000118137.531070.0218085382.68730-1.4584027.4189025.43340HepG2EIF4B
APOA1ENSG00000118137.545022.5503029528.945700.608404.203503.21160HepG2EIF4G2
APOA1ENSG00000118137.59310.9065029002.91800-1.639207.421506.22550HepG2FIP1L1
APOA1ENSG00000118137.529413.3009017149.512700.7782011.299709.08500HepG2FKBP4
APOA1ENSG00000118137.538240.2349029232.517000.387403.395401.55690HepG2FMR1
APOA1ENSG00000118137.528541.2162046951.22510-0.7181016.8723015.01170HepG2FUBP3
APOA1ENSG00000118137.542563.7244088486.14860-1.0558023.9096022.10100HepG2FXR1
APOA1ENSG00000118137.547327.1567082074.31360-0.7943012.3486010.99660HepG2G3BP1
APOA1ENSG00000118137.522056.9677013906.648000.6654010.429708.76340HepG2GEMIN5
APOA1ENSG00000118137.526493.853508101.820201.7092015.2167013.83600HepG2GPKOW
APOA1ENSG00000118137.549133.5105013371.148701.8775018.0820016.66730HepG2HNRNPA1
APOA1ENSG00000118137.526118.7109014872.863100.8123010.834609.54150HepG2HNRNPC
APOA1ENSG00000118137.528603.476209334.861801.6154078.7730076.11990HepG2HNRNPF
APOA1ENSG00000118137.556084.4209083130.00790-0.567809.171107.95830HepG2HNRNPK
APOA1ENSG00000118137.534775.0632028457.801500.289102.107301.50900HepG2HNRNPL
APOA1ENSG00000118137.532011.835107731.805402.0496016.6919015.33100HepG2HNRNPLL
APOA1ENSG00000118137.512406.6197020001.24180-0.689003.248002.22470HepG2HNRNPM
APOA1ENSG00000118137.518288.1170014774.537700.307707.270506.32430HepG2HNRNPU
APOA1ENSG00000118137.536841.894309192.121402.00280134.14450130.80190HepG2IGF2BP1
APOA1ENSG00000118137.5101086.1048083423.343800.277002.238101.62330HepG2IGF2BP2
APOA1ENSG00000118137.523518.9257078302.91120-1.7352013.1315011.16760HepG2IGF2BP3
APOA1ENSG00000118137.538870.5692018976.974301.0343012.691909.78090HepG2ILF3
APOA1ENSG00000118137.549338.4436034666.011400.509105.669104.22520HepG2KIF1C
APOA1ENSG00000118137.517576.6556025625.58560-0.543904.724603.08240HepG2KRR1
APOA1ENSG00000118137.530352.3104021196.170700.517903.159002.26880HepG2LARP4
APOA1ENSG00000118137.516402.9851024660.55480-0.588208.726806.82550HepG2LARP7
APOA1ENSG00000118137.535664.9362025886.894000.462205.856404.11640HepG2LIN28B
APOA1ENSG00000118137.565659.7367089009.58450-0.439004.099203.34560HepG2MATR3
APOA1ENSG00000118137.59371.5625016346.17740-0.802607.774306.10330HepG2METAP2
APOA1ENSG00000118137.524240.824107887.591501.6197028.8692025.97950HepG2MTPAP
APOA1ENSG00000118137.575403.0381091103.85450-0.272901.986201.44490HepG2NCBP2
APOA1ENSG00000118137.542387.0075022297.063600.9267021.1472017.86650HepG2NIP7
APOA1ENSG00000118137.525734.8891030979.91840-0.267603.401202.55720HepG2NOL12
APOA1ENSG00000118137.523358.8688015777.038100.566003.685802.02510HepG2NOLC1
APOA1ENSG00000118137.529590.168806856.440002.10950107.93720104.78260HepG2NSUN2
APOA1ENSG00000118137.524253.5213018332.267900.403704.550902.50760HepG2NUP35
APOA1ENSG00000118137.58655.5349014624.34750-0.7567035.4811033.14660HepG2PARN
APOA1ENSG00000118137.555315.8163087420.84620-0.6603031.6364029.96850HepG2PCBP1
APOA1ENSG00000118137.530733.3062013177.718901.2216060.6319057.38720HepG2PPIL4
APOA1ENSG00000118137.529289.6852012504.026301.2279017.5326015.86510HepG2PRPF4
APOA1ENSG00000118137.543558.8804088957.46730-1.0301047.3294045.66550HepG2PTBP1
APOA1ENSG00000118137.544398.1583029574.341300.5861011.9762010.85580HepG2PUF60
APOA1ENSG00000118137.523846.2506031395.98830-0.396806.762205.91980HepG2PUM1
APOA1ENSG00000118137.552413.8761031372.111100.7404024.0319022.17560HepG2PUM2
APOA1ENSG00000118137.568985.8378038630.456700.8365029.6972028.06960HepG2PUS1
APOA1ENSG00000118137.554008.2406096335.70110-0.8349032.9693031.19430HepG2QKI
APOA1ENSG00000118137.58242.5228021227.51770-1.364805.834104.83630HepG2RAVER1
APOA1ENSG00000118137.512559.6004026009.92660-1.0503041.2196038.70640HepG2RBM15
APOA1ENSG00000118137.524089.7362037369.00390-0.633409.298408.47580HepG2RBM22
APOA1ENSG00000118137.574733.6111087433.64900-0.226402.235201.62330HepG2RBM25
APOA1ENSG00000118137.520967.5791029737.43040-0.504105.863604.41040HepG2RBM27
APOA1ENSG00000118137.533395.1068024148.183400.467604.520703.16170HepG2RCC2
APOA1ENSG00000118137.578860.8790098998.22250-0.328103.018402.45790HepG2NELFE
APOA1ENSG00000118137.556511.2107092208.64610-0.7064031.3861029.73040HepG2RECQL
APOA1ENSG00000118137.531887.5394010056.719901.6647022.2913020.73440HepG2RPLP0
APOA1ENSG00000118137.539569.2179020869.167600.922905.492004.18400HepG2RPS10
APOA1ENSG00000118137.59624.4945015199.61290-0.6593014.9422013.66960HepG2RPS19
APOA1ENSG00000118137.535010.3450027424.391700.352203.223102.35880HepG2RPS2
APOA1ENSG00000118137.544617.0083019562.822601.1894018.9311016.93210HepG2RPS3A
APOA1ENSG00000118137.517910.6135027995.85980-0.644409.574507.59550HepG2RPS5
APOA1ENSG00000118137.510612.5650015717.31520-0.566607.111605.91900HepG2RRP9
APOA1ENSG00000118137.515628.8569013157.419000.248205.934605.04640HepG2SAFB2
APOA1ENSG00000118137.512373.3523015253.14010-0.301902.885101.92540HepG2SERBP1
APOA1ENSG00000118137.553345.1207034907.585300.611704.626803.74150HepG2SF3A3
APOA1ENSG00000118137.513285.235507652.390900.7957012.5900011.19170HepG2SF3B1
APOA1ENSG00000118137.539897.8062092609.95200-1.2149091.9468089.50460HepG2SF3B4
APOA1ENSG00000118137.561102.3578028360.301801.1073081.7840079.21780HepG2SLBP
APOA1ENSG00000118137.511264.6111015343.84130-0.4459022.3954020.84100HepG2SMN1
APOA1ENSG00000118137.520485.148108514.830901.2664011.8965010.28890HepG2SNRNP70
APOA1ENSG00000118137.56642.0595042207.59980-2.66780137.05790134.91550HepG2SRFBP1
APOA1ENSG00000118137.547555.3493096667.29260-1.0234056.4413054.91510HepG2SRSF1
APOA1ENSG00000118137.528803.332509171.374901.65090162.44870159.33950HepG2SRSF7
APOA1ENSG00000118137.544538.6956078646.18970-0.8203039.5213037.90900HepG2SRSF9
APOA1ENSG00000118137.5125533.8872036647.385901.77620235.94090233.45300HepG2SSB
APOA1ENSG00000118137.514166.1532025555.75980-0.8512011.098408.79530HepG2SSRP1
APOA1ENSG00000118137.522765.0759033209.35920-0.544808.271807.29260HepG2SUCLG1
APOA1ENSG00000118137.518704.1403025867.41930-0.467803.749302.18410HepG2SUGP2
APOA1ENSG00000118137.556961.9544020510.563101.4735024.1625022.52040HepG2SUPV3L1
APOA1ENSG00000118137.539961.8097086895.41460-1.1207028.4755026.92130HepG2TAF15
APOA1ENSG00000118137.521111.693407538.730301.4855019.3387017.74480HepG2TARDBP
APOA1ENSG00000118137.559063.2701025101.311701.234403.724302.49520HepG2TBRG4
APOA1ENSG00000118137.531906.5675013746.459301.2147025.9921023.66050HepG2TFIP11
APOA1ENSG00000118137.554004.2646079837.53280-0.5640012.1657010.44650HepG2TIA1
APOA1ENSG00000118137.523929.8778014356.477700.7370022.2658021.09990HepG2TIAL1
APOA1ENSG00000118137.552543.4487028895.360000.8626016.8220014.48610HepG2TUFM
APOA1ENSG00000118137.53663.1299012115.04100-1.7257033.1990030.74210HepG2UCHL5
APOA1ENSG00000118137.546398.1237030957.721700.5837028.3159026.55990HepG2UPF1
APOA1ENSG00000118137.558654.0629018776.845201.6432031.9068028.74390HepG2UPF2
APOA1ENSG00000118137.535192.7419029888.417100.235605.183104.40670HepG2UTP3
APOA1ENSG00000118137.525087.5607017523.582400.517602.538901.49590HepG2XPO5
APOA1ENSG00000118137.59299.1761020890.54900-1.167705.002303.28320HepG2XRCC5
APOA1ENSG00000118137.512872.7735023353.86350-0.859303.458102.27350HepG2XRCC6
APOA1ENSG00000118137.561639.9586020190.452201.6101052.6263049.88960HepG2XRN2
APOA1ENSG00000118137.519793.1596012338.895800.681706.663905.69560HepG2ZC3H8
APOA1ENSG00000118137.556194.1987034047.524600.7228061.0586059.37100HepG2ZNF622
APOA1ENSG00000118137.54.0049023.42420-2.548203.336101.66790K562CEBPZ
APOA1ENSG00000118137.51.3798026.92300-4.286406.223704.37490K562DDX21
APOA1ENSG00000118137.539.290000.0000099999.9999013.110609.93460K562EIF3H
APOA1ENSG00000118137.55.06490154.57880-4.9317028.2501026.09260K562MTPAP
APOA1ENSG00000118137.515.50390171.72090-3.4694019.2406017.52010K562NSUN2
APOA1ENSG00000118137.52.53400158.48160-5.9667031.8096028.72380K562NUFIP2
APOA1ENSG00000118137.51.67660169.48940-6.6595034.5960032.12360K562SF3A3
APOA1ENSG00000118137.54.13380173.64960-5.3926031.7016029.21910K562SRPK2
APOA1ENSG00000118137.53.95490182.08170-5.5248034.1492031.95900K562UPF1
APOA1ENSG00000118137.50.00000155.79770-99999.9999938.3493035.48390K562WDR3
APOA1ENSG00000118137.50.00000162.03820-99999.9999938.8104036.36250K562WDR43
APOA1ENSG00000118137.50.0000010.16980-99999.999993.084301.71450K562WRN
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for APOA1 is not available on ENCORE database.





5 RBPs can affect the splicing of APOA1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSAPOA1ENSG00000118137.5chr11-1167080601167081451167080601167081231167082741167083250.069000.000010.00137longerHepG2SF3B4
A5SSAPOA1ENSG00000118137.5chr11-116708234116708302116708243116708302116708060116708123-0.118000.000210.05755shorterHepG2DDX3X
A5SSAPOA1ENSG00000118137.5chr11-1167082341167083251167082741167083251167080601167081230.114000.000070.00725longerHepG2HNRNPK
RIAPOA1ENSG00000118137.5chr11-1167080601167083301167080601167081231167082341167083300.064000.000170.00195includedHepG2U2AF2
RIAPOA1ENSG00000118137.5chr11-116708060116708330116708060116708123116708234116708330-0.060000.000020.00123excludedHepG2TIA1
RIAPOA1ENSG00000118137.5chr11-116708060116708330116708060116708123116708234116708330-0.117000.000000.00000excludedHepG2HNRNPK

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for APOA1 is not avaliable on ENCORE database.