USP12

General Information

Gene Name       : USP12
Gene ID             : ENSG00000152484.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: USP12)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878USP12ENSG00000152484.1327.4321.9124.67ENCSR000AEF
HepG2USP12ENSG00000152484.136.2914.0010.14ENCSR985KAT
K562USP12ENSG00000152484.138.4710.279.37ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for USP12 is not avaliable on ENCORE database.



Proteins bound to RNA
  • USP12 RNA is bound by 29 proteins.  







eCLIP assay for USP12 is not avaliable on ENCORE database.





29 proteins are bound to USP12 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr132764087527640938-3'-UTR,intron-Distal4.542359.25286K562PUM2
chr132764036327640457-3'-UTR,intron-Distal6.2604416.26664K562CPSF6
chr132764172927641775-3'-UTR,intron-Distal4.136673.69433K562UPF1
chr132774589527745958-5'-UTR,intron-Distal4.302164.10386HepG2NCBP2
chr132774585927745965-5'-UTR,intron-Distal4.7742011.01919HepG2DDX3X
chr132766981927669916-CDS,intron-Distal4.998596.58593HepG2BCLAF1
chr132766966827669755-CDS,intron-Distal,intron-Proximal4.258336.40042K562EFTUD2
chr132766991627669967-CDS,intron-Distal3.291073.27569HepG2BCLAF1
chr132766406727664105-CDS,intron-Distal,intron-Proximal4.346593.45943HepG2BCLAF1
chr132766425927664346-CDS,intron-Distal,intron-Proximal4.889204.90235K562SF3B4
chr132766421827664253-CDS,intron-Distal,intron-Proximal4.176663.02457HepG2BCLAF1
chr132767986227679952-CDS,intron-Distal,intron-Proximal3.098035.51984K562UCHL5
chr132769072627690733-CDS,intron-Distal3.707153.02850K562YBX3
chr132764777327647898-intron-Distal4.8223310.12394K562QKI
chr132774527827745388-intron-Distal4.732966.05798HepG2PRPF4
chr132772586727725914-intron-Distal3.288135.02082K562EXOSC5
chr132774516527745254-intron-Distal4.599444.97583HepG2GTF2F1
chr132774531227745364-intron-Distal4.808606.64314K562CSTF2T
chr132774516627745237-intron-Distal3.044218.49009K562FASTKD2
chr132769915327699255-intron-Distal3.153713.74491K562CSTF2T
chr132774517327745276-intron-Distal3.557666.96093HepG2PRPF4
chr132774413227744181-intron-Distal3.862009.92368K562CSTF2T
chr132774529227745392-intron-Distal5.677677.51888HepG2FAM120A
chr132772510227725165-intron-Distal3.651774.91037K562EXOSC5
chr132774551327745587-intron-Distal4.486336.06839HepG2PRPF4
chr132773952827739582-intron-Distal4.595254.17759HepG2QKI
chr132772483427724875-intron-Distal4.214543.89080K562EXOSC5
chr132774552927745594-intron-Distal6.0165712.01049HepG2FAM120A
chr132774518127745242-intron-Distal4.356324.36811K562FAM120A
chr132766776627667852-intron-Distal4.230873.37414K562CSTF2T
chr132774553927745585-intron-Distal4.868866.41765K562GTF2F1
chr132774189927741953-intron-Distal3.824973.08314K562TARDBP
chr132770641227706501-intron-Distal3.411634.57086K562QKI
chr132774530227745394-intron-Distal4.8055712.80605HepG2CSTF2T
chr132774544227745532-intron-Distal4.562444.69321HepG2GTF2F1
chr132774409927744191-intron-Distal4.396304.47016HepG2CSTF2
chr132764784927647922-intron-Distal4.452554.85866HepG2QKI
chr132764452227644585-intron-Distal3.077103.40400K562HNRNPL
chr132774516427745254-intron-Distal3.985715.75122K562DROSHA
chr132774509627745140-intron-Distal4.514085.15063HepG2CSTF2T
chr132774543227745500-intron-Distal4.574094.41396HepG2FASTKD2
chr132774516927745236-intron-Distal4.7983611.30843K562GTF2F1
chr132764444227644498-intron-Distal3.006993.02891HepG2HNRNPL
chr132774516727745227-intron-Distal3.324463.33861K562DDX52
chr132774516927745237-intron-Distal3.453094.33261K562EWSR1
chr132774541327745492-intron-Distal6.0381613.05566HepG2CSTF2T
chr132774542127745517-intron-Distal5.367228.72707K562EWSR1
chr132774542527745503-intron-Distal5.526839.69896K562CSTF2T
chr132774517227745266-intron-Distal4.756703.17453HepG2XRN2
chr132774543527745521-intron-Distal3.505697.24772K562AKAP8L
chr132764761527647663-intron-Distal3.778593.05187HepG2QKI
chr132774516527745247-intron-Distal4.1108011.25734HepG2FAM120A
chr132767960927679720-intron-Distal4.247164.07352K562KHSRP
chr132774516127745225-intron-Distal3.556004.94042K562NONO
chr132774507727745144-intron-Distal4.435435.05096K562EWSR1
chr132774515027745249-intron-Distal3.9435814.73304HepG2CSTF2T
chr132774549227745589-intron-Distal4.4331812.65814HepG2CSTF2T
chr132774516827745232-intron-Distal3.040324.44486K562DDX51
chr132774507127745141-intron-Distal4.054057.66029K562CSTF2T
chr132764894027649002-intron-Distal3.424994.10408K562KHSRP
chr132774543627745513-intron-Distal4.063026.23254HepG2PRPF4
chr132774543327745489-intron-Distal3.622376.03664K562GTF2F1
chr132774544027745493-intron-Distal3.383323.80158K562NONO
chr132770640127706471-intron-Distal5.422979.49897HepG2QKI
chr132774418127744223-intron-Distal5.2583110.47310K562CSTF2T
chr132774516927745250-intron-Distal5.193098.20812HepG2FASTKD2
chr132772568127725739-intron-Distal4.279187.91405K562EXOSC5
chr132772621827726307-intron-Distal4.208507.31365K562EXOSC5
chr132774543827745509-intron-Distal4.9341910.54203K562GEMIN5
chr132774517127745238-intron-Distal3.806425.32880K562AKAP8L
chr132774518227745242-intron-Distal4.114135.37959K562GEMIN5
chr132774542827745498-intron-Distal5.201393.07235K562EFTUD2
chr132774542627745529-intron-Distal6.6108020.13438HepG2FAM120A
chr132774306927743141-intron-Distal3.479894.79863K562TARDBP
chr132774515527745244-intron-Distal5.1127215.47281K562CSTF2T
chr132774542227745509-intron-Distal4.5412313.77977K562DROSHA
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for USP12 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for USP12 is not available on ENCORE database.

  • 130 RBPs can affect the levels of USP12.  








The Knockdown/knockout RNA-Seq assay for USP12 is not available on ENCORE database.





130 RBPs can affect the gene expression of USP12 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
USP12ENSG00000152484.9738.463601165.13080-0.657906.146004.80300HepG2ABCF1
USP12ENSG00000152484.9491.68580797.08180-0.697006.771705.29870HepG2ADAR
USP12ENSG00000152484.9784.720801051.41820-0.422103.530401.95540HepG2ATP5C1
USP12ENSG00000152484.91803.929601265.604300.511206.191705.22950HepG2AUH
USP12ENSG00000152484.9500.32220732.70150-0.550403.196302.18930HepG2BCCIP
USP12ENSG00000152484.9888.723701138.66750-0.357502.377201.65520HepG2CIRBP
USP12ENSG00000152484.9563.30680999.24110-0.8269011.070609.92030HepG2CKAP4
USP12ENSG00000152484.9851.407601321.51150-0.634303.888002.97500HepG2CNOT7
USP12ENSG00000152484.9555.04010993.02410-0.8392010.144008.90760HepG2CPSF6
USP12ENSG00000152484.9746.85690924.29140-0.307503.316102.41150HepG2DDX19B
USP12ENSG00000152484.9226.85110723.37570-1.6730025.4612023.69980HepG2DDX21
USP12ENSG00000152484.91119.787101387.57150-0.309301.864501.34050HepG2DDX3X
USP12ENSG00000152484.91862.991901127.645900.724204.387503.16850HepG2DDX59
USP12ENSG00000152484.91558.153901191.879600.386502.481701.89480HepG2DDX6
USP12ENSG00000152484.9596.98560956.11420-0.6795010.717209.56260HepG2DKC1
USP12ENSG00000152484.9418.89690795.54660-0.9254019.4422017.86520HepG2DNAJC2
USP12ENSG00000152484.9530.48870772.28010-0.541803.896802.81910HepG2EEF2
USP12ENSG00000152484.9509.610301145.85520-1.1690017.1369015.75050HepG2EIF2S1
USP12ENSG00000152484.9686.43650883.85080-0.364702.720001.56260HepG2EIF2S2
USP12ENSG00000152484.9523.18320682.86980-0.384302.888401.78570HepG2EIF3G
USP12ENSG00000152484.9994.210001266.33970-0.349001.944101.40430HepG2EIF4A3
USP12ENSG00000152484.9539.947801232.89260-1.1912013.2299011.79140HepG2EIF4B
USP12ENSG00000152484.9625.16480976.63700-0.643605.121403.98800HepG2EWSR1
USP12ENSG00000152484.91594.000201176.502100.438002.953902.15880HepG2FIP1L1
USP12ENSG00000152484.9384.27870599.63030-0.641903.944502.44790HepG2FKBP4
USP12ENSG00000152484.91003.452101277.57770-0.348402.262101.63410HepG2FXR1
USP12ENSG00000152484.9681.153301185.19640-0.799108.531007.39650HepG2G3BP1
USP12ENSG00000152484.9220.69170558.23080-1.3388016.6472014.64150HepG2GEMIN5
USP12ENSG00000152484.9543.186201223.36380-1.1713012.5678010.26580HepG2GRSF1
USP12ENSG00000152484.9629.31750948.32620-0.591603.065601.60530HepG2HLTF
USP12ENSG00000152484.9765.606401117.62480-0.545803.496701.94550HepG2HNRNPA0
USP12ENSG00000152484.9420.95370810.30360-0.9448012.1961010.99590HepG2HNRNPA1
USP12ENSG00000152484.9569.301401062.54110-0.9003010.113408.53610HepG2HNRNPA2B1
USP12ENSG00000152484.9755.218801199.98860-0.668107.317506.22140HepG2HNRNPK
USP12ENSG00000152484.9650.870601053.41290-0.694605.678404.74350HepG2HNRNPL
USP12ENSG00000152484.9642.19540895.36010-0.479506.126105.25400HepG2HNRNPU
USP12ENSG00000152484.9746.09160955.81680-0.357402.774702.04930HepG2IGF2BP1
USP12ENSG00000152484.9921.793001204.74610-0.386202.782002.10510HepG2IGF2BP2
USP12ENSG00000152484.9464.04770914.57950-0.9788024.9490023.01450HepG2ILF2
USP12ENSG00000152484.9902.433301288.35420-0.513603.054101.65440HepG2ILF3
USP12ENSG00000152484.9948.211101259.36790-0.409402.481301.37020HepG2KHDRBS1
USP12ENSG00000152484.9851.812401211.73160-0.508503.232002.13670HepG2KHSRP
USP12ENSG00000152484.9546.13810771.82460-0.499003.877902.52690HepG2LARP7
USP12ENSG00000152484.9961.272301278.02330-0.410902.882802.21400HepG2MAGOH
USP12ENSG00000152484.9760.192501285.19350-0.757507.519906.51890HepG2MATR3
USP12ENSG00000152484.9490.66180952.18200-0.9565014.1516012.47420HepG2MSI2
USP12ENSG00000152484.91000.977501315.48100-0.394202.650802.02930HepG2NCBP2
USP12ENSG00000152484.9705.853801146.58760-0.699906.456905.29570HepG2NOL12
USP12ENSG00000152484.91077.293901375.83840-0.352902.962801.30410HepG2NUP35
USP12ENSG00000152484.92256.277701207.909900.901302.675701.80600HepG2PABPC1
USP12ENSG00000152484.91573.036201171.586000.425003.247602.46720HepG2PABPC4
USP12ENSG00000152484.9696.48390886.24490-0.347603.380302.45300HepG2PARN
USP12ENSG00000152484.9637.152601136.54080-0.8349017.8309016.50560HepG2PCBP1
USP12ENSG00000152484.9589.67010798.58850-0.437504.378903.47220HepG2PPIL4
USP12ENSG00000152484.9510.28750753.13370-0.561606.903105.74530HepG2PRPF4
USP12ENSG00000152484.9883.710801094.43200-0.308502.264401.71670HepG2PUF60
USP12ENSG00000152484.9743.569301161.68700-0.643706.342605.52150HepG2PUM1
USP12ENSG00000152484.9960.535601160.90120-0.273301.973401.40100HepG2PUM2
USP12ENSG00000152484.9837.120801017.89240-0.282102.842702.22080HepG2PUS1
USP12ENSG00000152484.91602.474601252.485100.355403.843103.12320HepG2QKI
USP12ENSG00000152484.91247.16870904.916300.462701.977401.37200HepG2RAVER1
USP12ENSG00000152484.91694.927701385.910900.290302.721701.86970HepG2RBM15
USP12ENSG00000152484.91435.344601214.451700.241002.143201.67210HepG2RBM22
USP12ENSG00000152484.9811.256901136.71340-0.486605.019404.13570HepG2RBM25
USP12ENSG00000152484.9585.15440930.67910-0.669506.031104.56330HepG2RBM27
USP12ENSG00000152484.9931.860901287.04420-0.465906.488505.71900HepG2NELFE
USP12ENSG00000152484.9850.523001198.71180-0.495107.153906.23140HepG2RECQL
USP12ENSG00000152484.9377.16930610.02240-0.693706.566305.66400HepG2RPS19
USP12ENSG00000152484.9635.52700858.36110-0.433602.893102.07700HepG2RPS2
USP12ENSG00000152484.9724.522701327.14550-0.873208.332906.96860HepG2RPS3A
USP12ENSG00000152484.9959.286501204.03490-0.327803.543302.88600HepG2SF3B4
USP12ENSG00000152484.9698.26160929.84280-0.413205.465704.61310HepG2SMN1
USP12ENSG00000152484.9547.34620921.64040-0.751804.843403.54390HepG2SMNDC1
USP12ENSG00000152484.91562.591401371.711900.187901.924901.48410HepG2SRFBP1
USP12ENSG00000152484.9860.346501080.47130-0.328702.269401.69550HepG2SRSF5
USP12ENSG00000152484.91222.457901022.438600.257702.612902.07270HepG2SRSF9
USP12ENSG00000152484.9911.233201344.81810-0.561504.505802.90020HepG2SSRP1
USP12ENSG00000152484.9474.79140785.82360-0.726905.247103.59990HepG2STAU1
USP12ENSG00000152484.9840.476101154.52130-0.458002.833401.71690HepG2STIP1
USP12ENSG00000152484.91331.78840845.613500.655204.467202.92690HepG2SUB1
USP12ENSG00000152484.9677.073401228.89710-0.860009.622308.58070HepG2SUCLG1
USP12ENSG00000152484.9975.83360717.155000.444302.973502.27620HepG2SUPV3L1
USP12ENSG00000152484.9904.307401129.62650-0.321003.077002.49070HepG2TAF15
USP12ENSG00000152484.9828.838901320.93390-0.672402.872801.78700HepG2TBRG4
USP12ENSG00000152484.9617.04110869.98490-0.495605.004204.37270HepG2TIAL1
USP12ENSG00000152484.91513.667001006.420000.588705.938805.03560HepG2U2AF1
USP12ENSG00000152484.9705.50710968.51350-0.457105.470804.04160HepG2UTP18
USP12ENSG00000152484.91461.59920889.516700.716405.416503.64260HepG2XRCC5
USP12ENSG00000152484.9319.08070705.95970-1.1457012.7734011.23700HepG2XRN2
USP12ENSG00000152484.91382.237201036.303200.415507.240306.46410HepG2ZNF622
USP12ENSG00000152484.9690.16470504.821800.451103.186201.90670K562AARS
USP12ENSG00000152484.91615.39820919.476000.8129020.7172019.27840K562AGGF1
USP12ENSG00000152484.91265.221701010.375400.324402.262001.38560K562AKAP8
USP12ENSG00000152484.91239.21040956.759000.373103.156502.45800K562AKAP8L
USP12ENSG00000152484.91528.106101146.359200.414603.336902.70460K562AQR
USP12ENSG00000152484.91222.12230891.964700.454203.699802.69000K562BOP1
USP12ENSG00000152484.9943.85830678.808500.475504.526302.58100K562CEBPZ
USP12ENSG00000152484.91768.750301082.473100.708304.544703.14000K562CNOT7
USP12ENSG00000152484.92415.083001552.727000.6372012.0114010.05350K562CELF1
USP12ENSG00000152484.9808.42290617.075900.389603.146002.02930K562DDX3X
USP12ENSG00000152484.91339.180901128.460300.246902.312601.70790K562DDX47
USP12ENSG00000152484.9802.422501029.52530-0.359503.466702.47070K562DKC1
USP12ENSG00000152484.91524.236501262.915300.271202.893001.93420K562EIF4G2
USP12ENSG00000152484.91270.77610965.040800.396903.104702.19300K562FMR1
USP12ENSG00000152484.91056.08740818.006500.368402.350501.51290K562FTO
USP12ENSG00000152484.91325.95700821.533800.690503.864102.99620K562G3BP2
USP12ENSG00000152484.91053.30000643.670400.7104011.312509.16050K562GLRX3
USP12ENSG00000152484.91199.43240905.403500.405603.415902.53610K562GPKOW
USP12ENSG00000152484.9795.699101046.48330-0.395303.382402.54860K562GRSF1
USP12ENSG00000152484.9870.20250674.384400.367702.906401.80570K562HNRNPA1
USP12ENSG00000152484.91566.06950826.722700.921605.056903.24940K562HNRNPA2B1
USP12ENSG00000152484.91436.294301015.351500.500305.270104.05530K562KIF1C
USP12ENSG00000152484.91059.98120773.219800.455002.695601.77730K562KRR1
USP12ENSG00000152484.91709.706601346.161800.344803.068701.87650K562MSI2
USP12ENSG00000152484.9898.38390676.733900.408602.054501.35260K562MTPAP
USP12ENSG00000152484.91155.72040797.271900.535502.483001.65810K562NAA15
USP12ENSG00000152484.9879.96130643.758600.450804.278402.73560K562NCBP2
USP12ENSG00000152484.91124.23530751.921200.5802011.073209.71870K562NSUN2
USP12ENSG00000152484.91566.005501039.943500.590503.640402.20620K562PABPC1
USP12ENSG00000152484.91129.49670723.033300.643402.631301.67160K562PABPN1
USP12ENSG00000152484.9728.73000496.159300.554504.269903.34020K562PRPF8
USP12ENSG00000152484.91742.626401377.951800.338602.546901.76490K562PUF60
USP12ENSG00000152484.91855.12530948.824400.9672015.0258013.80170K562PUS1
USP12ENSG00000152484.91254.79300783.808300.678804.020702.27020K562RAVER1
USP12ENSG00000152484.91357.77700924.501300.554408.131507.14390K562RBM15
USP12ENSG00000152484.91034.48410809.638000.353502.630501.81210K562RBM22
USP12ENSG00000152484.91840.20550889.512201.048705.687803.27590K562RBM39
USP12ENSG00000152484.9730.005501119.91980-0.617404.376703.07910K562RPS3
USP12ENSG00000152484.91304.15360741.940800.8136017.0437015.15790K562SF3A3
USP12ENSG00000152484.91370.61060861.234900.670206.265504.77030K562SF3B1
USP12ENSG00000152484.91043.94280854.095400.289502.301401.52350K562SF3B4
USP12ENSG00000152484.91332.15190759.411900.810703.687402.19550K562SNRNP200
USP12ENSG00000152484.91070.27940760.133200.493607.474806.01320K562SRPK2
USP12ENSG00000152484.91116.79960827.542300.432404.215103.35040K562SRSF1
USP12ENSG00000152484.9967.34300696.367800.474103.831402.43960K562SRSF7
USP12ENSG00000152484.91667.45720908.304500.876304.211602.29540K562SUPT6H
USP12ENSG00000152484.9720.08850480.462400.583704.347403.05040K562SUPV3L1
USP12ENSG00000152484.9647.03810837.60240-0.372402.449101.78100K562TARDBP
USP12ENSG00000152484.9596.58500807.94220-0.437503.723202.75450K562TIA1
USP12ENSG00000152484.91551.55650796.158600.9625011.300208.88760K562U2AF1
USP12ENSG00000152484.92395.46920822.315701.5424057.4971054.21560K562U2AF2
USP12ENSG00000152484.91216.73740797.277200.6098010.841509.53560K562UPF1
USP12ENSG00000152484.91142.58040682.206100.7439010.782809.00500K562WDR3
USP12ENSG00000152484.9979.19980709.407200.464906.443405.20290K562WDR43
USP12ENSG00000152484.91827.242101358.330800.427704.602602.92740K562WRN
USP12ENSG00000152484.91591.22860893.632900.832303.959701.89940K562YTHDC2
USP12ENSG00000152484.91903.528601291.359300.559707.127305.63000K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for USP12 is not available on ENCORE database.





8 RBPs can affect the splicing of USP12 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEUSP12ENSG00000152484.9chr13-276452072764528627640292276435212764932727649525-0.274000.000400.01523excludedK562AKAP8L
SEUSP12ENSG00000152484.9chr13-276452072764528627640292276435212764932727649525-0.351000.000020.00059excludedK562PUS1
SEUSP12ENSG00000152484.9chr13-2767562227675705276697372766996727679867276800810.068000.001670.08209includedHepG2NCBP2
SEUSP12ENSG00000152484.9chr13-2767562227675705276697372766996727679867276800810.076000.000810.03688includedHepG2MATR3
SEUSP12ENSG00000152484.9chr13-276452072764528627640292276435212764932727649525-0.425000.000000.00005excludedK562RBM15
SEUSP12ENSG00000152484.9chr13-276452072764528627640292276435212764932727649525-0.439000.000000.00002excludedK562AGGF1
A3SSUSP12ENSG00000152484.9chr13-2766421827664315276642182766429527669737276699670.272000.000000.00001longerK562AQR
MXEUSP12ENSG00000152484.9chr13-27679867276800812769065227690733276697372766996727745728277460330.059000.009860.053201includedHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for USP12 is not avaliable on ENCORE database.