SPC24

General Information

Gene Name       : SPC24
Gene ID             : ENSG00000161888.11
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: SPC24)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SPC24ENSG00000161888.1110.7412.3211.53ENCSR000AEF
HepG2SPC24ENSG00000161888.1117.0611.6614.36ENCSR985KAT
K562SPC24ENSG00000161888.1128.2727.9528.11ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SPC24 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SPC24 RNA is bound by 18 proteins.  







eCLIP assay for SPC24 is not avaliable on ENCORE database.





18 proteins are bound to SPC24 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr191125708611257133-3'-UTR,CDS,intron-Distal5.99333400.00000K562UPF1
chr191125701811257066-3'-UTR,CDS,intron-Distal3.039543.15160HepG2STAU2
chr191125854311258587-3'-UTR,CDS,intron-Distal,intron-Proximal3.981634.95436K562GPKOW
chr191125664111256671-3'-UTR,intron-Distal,intron-Proximal4.6190075.72626K562AKAP1
chr191125722411257251-3'-UTR,intron-Distal3.3330211.14033K562AKAP1
chr191125632011256393-3'-UTR,intron-Distal4.316316.62754K562PUM2
chr191125654811256595-3'-UTR,intron-Distal,intron-Proximal5.6285558.13643K562UPF1
chr191125663611256771-3'-UTR,intron-Distal,intron-Proximal5.9309081.12315HepG2UPF1
chr191125706811257146-3'-UTR,CDS,intron-Distal4.3790663.53276K562AKAP1
chr191125701511257084-3'-UTR,CDS,intron-Distal5.27897400.00000K562UPF1
chr191125750011257585-3'-UTR,intron-Distal4.1758626.01503K562AKAP1
chr191125792611258021-3'-UTR,CDS,intron-Distal3.197604.04407HepG2ILF3
chr191125707411257142-3'-UTR,CDS,intron-Distal3.1286512.74664K562DDX55
chr191125772711257741-3'-UTR,intron-Distal,intron-Proximal3.6880215.35111K562UPF1
chr191125661711256671-3'-UTR,intron-Distal,intron-Proximal5.9591259.98464K562UPF1
chr191125668911256767-3'-UTR,intron-Distal,intron-Proximal4.2680916.49965HepG2AKAP1
chr191125667111256693-3'-UTR,intron-Distal,intron-Proximal5.0301441.43361K562UPF1
chr191125708211257149-3'-UTR,CDS,intron-Distal5.108299.44389K562HNRNPC
chr191125667511256694-3'-UTR,intron-Distal,intron-Proximal3.8475861.52811K562AKAP1
chr191125662211256689-3'-UTR,intron-Distal,intron-Proximal4.8489612.77891HepG2AKAP1
chr191125866111258786-3'-UTR,CDS,intron-Distal,intron-Proximal4.299006.08299HepG2PPIG
chr191125713311257145-3'-UTR,intron-Distal6.11054400.00000K562UPF1
chr191125756411257598-3'-UTR,intron-Distal4.0560321.09421K562UPF1
chr191125848911258538-3'-UTR,CDS,intron-Distal,intron-Proximal4.007133.76295K562LIN28B
chr191125707811257133-3'-UTR,CDS,intron-Distal3.071247.56459HepG2STAU2
chr191125721011257257-3'-UTR,intron-Distal5.1113131.36685K562UPF1
chr191125669311256713-3'-UTR,intron-Distal,intron-Proximal4.4144351.80961K562UPF1
chr191125868611258773-3'-UTR,CDS,intron-Distal,intron-Proximal3.107183.79741HepG2GRWD1
chr191125854111258587-3'-UTR,CDS,intron-Distal,intron-Proximal3.353937.50495K562BUD13
chr191125708811257142-3'-UTR,CDS,intron-Distal4.4338818.73935HepG2UPF1
chr191125708511257142-3'-UTR,CDS,intron-Distal4.1816110.77439HepG2AKAP1
chr191125655511256599-3'-UTR,intron-Distal,intron-Proximal4.1389219.45261K562AKAP1
chr191125635711256448-3'-UTR,intron-Distal6.1146411.48502K562FAM120A
chr191125671311256752-3'-UTR,intron-Distal4.8506263.50181K562UPF1
chr191125669411256756-3'-UTR,intron-Distal,intron-Proximal4.0179370.71831K562AKAP1
chr191125661511256641-3'-UTR,intron-Distal,intron-Proximal4.0845128.74127K562AKAP1
chr191125794211258004-3'-UTR,CDS,intron-Distal3.637955.37841K562SF3B4
chr191125975911259906-3'-UTR,CDS,intron-Distal,intron-Proximal3.554084.65365HepG2GRWD1
chr191125774111257752-3'-UTR,intron-Distal,intron-Proximal3.5432712.78246K562UPF1
chr191126633411266457-5'-UTR,CDS,intron-Distal,intron-Proximal3.097414.07680HepG2NCBP2
chr191126630411266472-5'-UTR,CDS,intron-Distal,intron-Proximal4.4359918.10501K562DDX3X
chr191125981111259902-CDS,intron-Distal3.235134.59873K562UCHL5
chr191125989711259965-CDS,intron-Distal,intron-Proximal3.680395.47851K562SF3B4
chr191126212211262194-intron-Distal3.029353.37821K562ILF3
chr191126621611266293-intron-Distal3.123636.02419K562AQR
chr191126331511263463-intron-Distal3.462474.34776K562ILF3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SPC24 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SPC24 is not available on ENCORE database.

  • 130 RBPs can affect the levels of SPC24.  








The Knockdown/knockout RNA-Seq assay for SPC24 is not available on ENCORE database.





130 RBPs can affect the gene expression of SPC24 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SPC24ENSG00000161888.7189.13740364.70840-0.9473010.255909.23910HepG2ACO1
SPC24ENSG00000161888.791.66010309.55580-1.7558014.2705013.16090HepG2AKAP1
SPC24ENSG00000161888.747.4166089.31120-0.913402.665501.64540HepG2AKAP8
SPC24ENSG00000161888.7248.51790366.43320-0.560204.174203.24510HepG2AKAP8L
SPC24ENSG00000161888.740.75530256.13710-2.6519025.5403023.50370HepG2ASCC1
SPC24ENSG00000161888.7214.78420317.42580-0.563502.958101.50750HepG2ATP5C1
SPC24ENSG00000161888.7248.20870389.39870-0.649705.185904.29470HepG2AUH
SPC24ENSG00000161888.793.18670197.23470-1.081705.562504.33290HepG2BCLAF1
SPC24ENSG00000161888.75.90160189.83850-5.0075039.7051037.92720HepG2BOP1
SPC24ENSG00000161888.796.04820258.88150-1.4305011.6656010.25830HepG2CALR
SPC24ENSG00000161888.7105.00410243.34600-1.212607.709106.46920HepG2CIRBP
SPC24ENSG00000161888.775.75120364.64280-2.2671039.3635037.53180HepG2CKAP4
SPC24ENSG00000161888.727.1793076.22710-1.487804.008903.08140HepG2CNOT7
SPC24ENSG00000161888.790.20740174.27510-0.950004.297803.45860HepG2CPSF6
SPC24ENSG00000161888.7264.96050428.79970-0.694503.912703.17230HepG2CELF1
SPC24ENSG00000161888.7372.83260461.04720-0.306401.950801.31240HepG2DAZAP1
SPC24ENSG00000161888.7240.30640337.30930-0.489203.602602.66710HepG2DDX19B
SPC24ENSG00000161888.779.01930236.29300-1.5803011.6630010.38310HepG2DDX21
SPC24ENSG00000161888.7101.73550231.04780-1.183408.390806.81460HepG2DDX24
SPC24ENSG00000161888.750.11260296.54330-2.5650027.2105025.46860HepG2DDX3X
SPC24ENSG00000161888.7123.12400223.19970-0.858204.006003.09320HepG2DDX55
SPC24ENSG00000161888.796.53940197.90450-1.035604.066802.89400HepG2DDX59
SPC24ENSG00000161888.753.45290254.70790-2.2525018.7564017.34220HepG2DDX6
SPC24ENSG00000161888.7185.36850348.93060-0.912508.340907.28870HepG2DKC1
SPC24ENSG00000161888.7162.55230227.34910-0.484002.161901.57200HepG2DNAJC2
SPC24ENSG00000161888.7147.81670266.35770-0.849604.547403.39010HepG2EEF2
SPC24ENSG00000161888.7119.54150222.03360-0.893304.889103.41690HepG2EFTUD2
SPC24ENSG00000161888.781.47200217.43670-1.416209.014407.10100HepG2AGO1
SPC24ENSG00000161888.719.41040244.88560-3.6572034.9001032.95500HepG2EIF2S1
SPC24ENSG00000161888.764.26450216.21380-1.7504012.5940010.81860HepG2EIF3D
SPC24ENSG00000161888.7149.42220223.01840-0.577802.752101.67290HepG2EIF3G
SPC24ENSG00000161888.7135.79980270.64120-0.994906.070905.12780HepG2EIF4A3
SPC24ENSG00000161888.7118.49920263.48070-1.152806.103705.11200HepG2EIF4B
SPC24ENSG00000161888.7221.10580454.86660-1.0407012.5072010.98250HepG2EIF4G1
SPC24ENSG00000161888.7320.35140435.73040-0.443802.393501.63340HepG2EIF4G2
SPC24ENSG00000161888.7163.74160447.08530-1.4491020.9906019.59620HepG2ETF1
SPC24ENSG00000161888.7164.56010356.39730-1.1149010.807309.19010HepG2EWSR1
SPC24ENSG00000161888.7199.97090355.22540-0.828904.502903.53750HepG2FIP1L1
SPC24ENSG00000161888.7429.25350273.023700.652704.128203.29510HepG2FXR1
SPC24ENSG00000161888.7154.87770253.29160-0.709703.438702.70120HepG2G3BP1
SPC24ENSG00000161888.796.68810192.50770-0.993504.698203.52800HepG2GEMIN5
SPC24ENSG00000161888.783.36900197.53530-1.244506.592405.63220HepG2GPKOW
SPC24ENSG00000161888.7258.76050348.20040-0.428302.833201.84440HepG2HDGF
SPC24ENSG00000161888.7145.77550276.52280-0.923604.062102.35840HepG2HLTF
SPC24ENSG00000161888.7113.06170231.52110-1.034004.910604.08290HepG2HNRNPA1
SPC24ENSG00000161888.7256.16630423.72410-0.726006.513905.18150HepG2HNRNPA2B1
SPC24ENSG00000161888.7131.59870257.54120-0.968705.723104.75340HepG2HNRNPC
SPC24ENSG00000161888.769.40290188.51330-1.441608.197207.17650HepG2HNRNPLL
SPC24ENSG00000161888.7159.30880245.07490-0.621403.090002.08680HepG2HNRNPM
SPC24ENSG00000161888.724.13200257.47320-3.4154034.9094032.82610HepG2IGF2BP2
SPC24ENSG00000161888.7171.0183072.713301.233805.812903.98990HepG2KHDRBS1
SPC24ENSG00000161888.7157.07110369.25490-1.233209.491007.95090HepG2LARP4
SPC24ENSG00000161888.7196.00990273.11880-0.478601.932301.37860HepG2MAGOH
SPC24ENSG00000161888.797.29520226.28070-1.217704.756003.39980HepG2METAP2
SPC24ENSG00000161888.7179.39180281.12940-0.648103.095802.42850HepG2NCBP2
SPC24ENSG00000161888.792.79400204.99260-1.143505.044303.54080HepG2NONO
SPC24ENSG00000161888.735.28390250.38960-2.8271027.9457025.71970HepG2PABPC4
SPC24ENSG00000161888.7162.92270253.21400-0.636203.605702.65110HepG2PARN
SPC24ENSG00000161888.7143.23840261.70760-0.869506.395905.53270HepG2PCBP1
SPC24ENSG00000161888.782.81670272.81570-1.7199013.3468011.34090HepG2PCBP2
SPC24ENSG00000161888.7177.34650270.53180-0.609202.639101.88130HepG2PRPF4
SPC24ENSG00000161888.743.64520172.14110-1.9797012.3371010.80440HepG2PRPF8
SPC24ENSG00000161888.7198.53740266.28850-0.423602.080101.59310HepG2PTBP1
SPC24ENSG00000161888.7115.69200436.41790-1.9154026.8152025.21840HepG2PUF60
SPC24ENSG00000161888.7202.63860463.28260-1.1930018.4140017.15900HepG2PUM1
SPC24ENSG00000161888.7231.49370462.94060-0.9999010.651809.38360HepG2PUM2
SPC24ENSG00000161888.7168.92420288.41560-0.771805.067404.26110HepG2QKI
SPC24ENSG00000161888.796.34460263.20590-1.449907.694606.55220HepG2RAVER1
SPC24ENSG00000161888.7265.97270428.64760-0.688505.783404.60110HepG2RBM15
SPC24ENSG00000161888.724.50330373.67990-3.9308064.1352062.29090HepG2RBM22
SPC24ENSG00000161888.7108.96670261.74870-1.2643010.038808.81410HepG2RBM25
SPC24ENSG00000161888.7146.0940073.648200.988103.783902.00000HepG2RBM47
SPC24ENSG00000161888.7218.89520296.36080-0.437102.194301.70130HepG2NELFE
SPC24ENSG00000161888.727.70340216.97730-2.9694027.3232025.65920HepG2RPLP0
SPC24ENSG00000161888.7102.96490258.67190-1.329008.235306.67850HepG2RPS10
SPC24ENSG00000161888.727.53660210.39550-2.9337028.5545026.92800HepG2RPS19
SPC24ENSG00000161888.7106.17030304.91720-1.5220013.2967011.64170HepG2RPS2
SPC24ENSG00000161888.726.2626076.62000-1.544704.699203.65660HepG2RPS3A
SPC24ENSG00000161888.722.67770170.27930-2.9086019.6300017.89400HepG2RRP9
SPC24ENSG00000161888.7142.68760211.14900-0.565402.264801.41070HepG2SERBP1
SPC24ENSG00000161888.7104.15330306.60990-1.5577012.3093010.82840HepG2SF3A3
SPC24ENSG00000161888.790.10220186.57990-1.050205.414704.45200HepG2SF3B1
SPC24ENSG00000161888.7106.14940277.25640-1.3851013.0495011.91470HepG2SF3B4
SPC24ENSG00000161888.7300.52140418.46850-0.477703.554802.77630HepG2SLBP
SPC24ENSG00000161888.7139.66170265.66520-0.927706.151205.25130HepG2SMN1
SPC24ENSG00000161888.7139.76930268.73310-0.943105.377004.01110HepG2SMNDC1
SPC24ENSG00000161888.786.05020207.60680-1.270605.973704.81990HepG2SNRNP70
SPC24ENSG00000161888.784.70870422.05640-2.3169042.5177041.16490HepG2SRFBP1
SPC24ENSG00000161888.7157.99160289.38920-0.873206.418205.77100HepG2SRSF1
SPC24ENSG00000161888.7175.10330430.90600-1.2992017.5017016.11950HepG2SRSF5
SPC24ENSG00000161888.784.93470197.89410-1.220308.433707.33280HepG2SRSF7
SPC24ENSG00000161888.782.23430235.42810-1.5175014.3227013.24400HepG2SRSF9
SPC24ENSG00000161888.7285.31610366.44270-0.361002.056101.59760HepG2SSB
SPC24ENSG00000161888.7143.94610245.99060-0.773102.982301.73060HepG2SUB1
SPC24ENSG00000161888.7250.49940490.05290-0.9681012.4578011.30150HepG2SUCLG1
SPC24ENSG00000161888.744.3283098.08960-1.145903.536002.02030HepG2SUGP2
SPC24ENSG00000161888.7149.59530239.84430-0.681003.299002.27740HepG2SUPT6H
SPC24ENSG00000161888.731.04720222.18040-2.8392024.1022022.46330HepG2SUPV3L1
SPC24ENSG00000161888.770.06720183.79280-1.391308.016806.86650HepG2TARDBP
SPC24ENSG00000161888.747.32590148.91280-1.653808.694907.12490HepG2TFIP11
SPC24ENSG00000161888.7163.49550239.01210-0.547802.724301.89410HepG2TIA1
SPC24ENSG00000161888.740.62890248.53070-2.6128022.1921021.02810HepG2TIAL1
SPC24ENSG00000161888.7126.98500250.82000-0.982006.497105.69870HepG2TRIM56
SPC24ENSG00000161888.7282.94750426.37110-0.591603.995802.92250HepG2TUFM
SPC24ENSG00000161888.7158.57550303.85830-0.938205.704404.81920HepG2U2AF1
SPC24ENSG00000161888.744.07160205.87960-2.223907.510805.80110HepG2U2AF2
SPC24ENSG00000161888.7209.33780451.31330-1.108306.478405.16740HepG2UBE2L3
SPC24ENSG00000161888.763.35630271.91690-2.1016025.3330023.65690HepG2UPF1
SPC24ENSG00000161888.7145.86550279.48620-0.938107.301005.69170HepG2UTP18
SPC24ENSG00000161888.7142.86440262.52380-0.877806.240505.39950HepG2UTP3
SPC24ENSG00000161888.7116.25680289.52270-1.316409.163807.35980HepG2XRCC6
SPC24ENSG00000161888.720.84990299.05540-3.8423061.3091059.61620HepG2ZNF622
SPC24ENSG00000161888.7152.82250263.08560-0.783703.915702.34690HepG2ZRANB2
SPC24ENSG00000161888.7635.38630893.02620-0.491104.124002.64650K562AARS
SPC24ENSG00000161888.71524.359701291.179800.239402.484201.94120K562AGGF1
SPC24ENSG00000161888.7611.222001563.41000-1.3549027.3005025.65460K562AQR
SPC24ENSG00000161888.7615.97330829.24660-0.428904.634602.91110K562DDX27
SPC24ENSG00000161888.7726.192701494.66390-1.0414029.9433028.02640K562DDX47
SPC24ENSG00000161888.7584.44730892.96810-0.611506.036404.64490K562EFTUD2
SPC24ENSG00000161888.7911.632601100.91880-0.272202.385601.70960K562EIF2S2
SPC24ENSG00000161888.7296.57730593.02730-0.999706.103504.57110K562EIF3A
SPC24ENSG00000161888.7521.24730955.90370-0.874909.238407.20250K562EIF3D
SPC24ENSG00000161888.7683.51180917.11870-0.424103.452602.53980K562EIF4A3
SPC24ENSG00000161888.71272.76680863.435400.559706.009804.72620K562FIP1L1
SPC24ENSG00000161888.7539.73320848.19000-0.652105.636503.91740K562FKBP4
SPC24ENSG00000161888.7678.84140953.76220-0.490605.861205.02840K562FXR1
SPC24ENSG00000161888.7343.96990598.46490-0.799005.879404.76270K562G3BP2
SPC24ENSG00000161888.7410.36390591.00880-0.526303.549402.65380K562GPKOW
SPC24ENSG00000161888.71172.468201467.08900-0.323402.705101.95590K562GRSF1
SPC24ENSG00000161888.7421.70200977.37670-1.2127021.5794019.99140K562HNRNPC
SPC24ENSG00000161888.7268.46170504.58040-0.910406.399704.91370K562KRR1
SPC24ENSG00000161888.7679.50290919.99420-0.437103.597302.63130K562MAGOH
SPC24ENSG00000161888.71120.32580918.065100.287202.139901.33880K562MATR3
SPC24ENSG00000161888.7566.28430818.49170-0.531404.618503.34920K562PCBP2
SPC24ENSG00000161888.71319.69060980.223400.428903.645902.68440K562PPIG
SPC24ENSG00000161888.7504.23140868.96570-0.785208.455507.13870K562PRPF8
SPC24ENSG00000161888.71348.451501957.70840-0.537906.814005.53320K562PUF60
SPC24ENSG00000161888.7344.99580570.95930-0.726803.680502.00410K562RAVER1
SPC24ENSG00000161888.71530.067501298.236700.236902.074001.54710K562RBM15
SPC24ENSG00000161888.7619.78950901.78430-0.541004.648403.19120K562NELFE
SPC24ENSG00000161888.7354.50570884.99820-1.3199017.8456015.76660K562RPS19
SPC24ENSG00000161888.71248.99510888.327800.491502.956401.58040K562RRP9
SPC24ENSG00000161888.7690.55030938.27150-0.442303.729502.46710K562SAFB
SPC24ENSG00000161888.7351.72660622.07780-0.8226010.277308.58150K562SF3B4
SPC24ENSG00000161888.7562.98030903.90820-0.683102.748001.52350K562SNRNP200
SPC24ENSG00000161888.7507.89320876.32990-0.7869010.401809.04620K562SRSF1
SPC24ENSG00000161888.7773.429701056.17240-0.449504.653003.58150K562SYNCRIP
SPC24ENSG00000161888.7437.81930598.94930-0.452103.610402.69160K562U2AF2
SPC24ENSG00000161888.71339.022701549.63460-0.210702.048401.42440K562UPF1
SPC24ENSG00000161888.71089.569101378.88370-0.339704.595703.52610K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SPC24 is not available on ENCORE database.






No RBPs affect the alternative splcing events of SPC24 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for SPC24 is not avaliable on ENCORE database.