PREB

General Information

Gene Name       : PREB
Gene ID             : ENSG00000138073.13
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: PREB)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PREBENSG00000138073.1328.3436.8732.60ENCSR000AEF
HepG2PREBENSG00000138073.1398.0384.1891.11ENCSR985KAT
K562PREBENSG00000138073.1356.9656.6356.80ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PREB is not avaliable on ENCORE database.



Proteins bound to RNA
  • PREB RNA is bound by 17 proteins.  







eCLIP assay for PREB is not avaliable on ENCORE database.





17 proteins are bound to PREB RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr22735465927354726-3'-UTR,CDS,intron-Distal,intron-Proximal4.3071016.34099HepG2BUD13
chr22735377227353846-3'-UTR,intron-Distal4.404666.19596HepG2UPF1
chr22735555827355586-3'-UTR,CDS,intron-Distal,intron-Proximal3.775873.00996K562BUD13
chr22735400627354060-3'-UTR,intron-Distal,intron-Proximal3.574826.84281K562UPF1
chr22735466627354709-3'-UTR,CDS,intron-Distal,intron-Proximal4.079723.56076K562BUD13
chr22735403927354127-3'-UTR,intron-Distal4.295039.29401HepG2AKAP1
chr22735418427354253-3'-UTR,CDS,intron-Distal,intron-Proximal5.107977.10674HepG2UPF1
chr22735467727354703-3'-UTR,CDS,intron-Distal,intron-Proximal4.672064.86944K562AQR
chr22735397327354039-3'-UTR,intron-Distal,intron-Proximal4.5610311.34140HepG2AKAP1
chr22735398827354166-3'-UTR,intron-Distal,intron-Proximal4.1005312.82321HepG2UPF1
chr22735483627354899-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.3718022.47536HepG2PRPF8
chr22735509827355159-3'-UTR,CDS,intron-Distal,intron-Proximal3.402275.08732HepG2PPIG
chr22735382027353918-3'-UTR,intron-Distal5.4438710.29040HepG2AKAP1
chr22735554327355595-3'-UTR,CDS,intron-Distal,intron-Proximal3.6458110.84333HepG2PPIG
chr22735372827353857-3'-UTR,intron-Distal5.2325721.03004K562UPF1
chr22735435227354391-3'-UTR,CDS,intron-Distal4.610344.12401HepG2U2AF2
chr22735367727353728-3'-UTR,intron-Distal5.351098.00788K562UPF1
chr22735391827353973-3'-UTR,intron-Distal,intron-Proximal3.770788.70465HepG2AKAP1
chr22735454227354576-3'-UTR,CDS,intron-Distal4.106216.72556HepG2PPIG
chr22735390227353981-3'-UTR,intron-Distal,intron-Proximal4.0384713.82382K562UPF1
chr22735384627353988-3'-UTR,intron-Distal,intron-Proximal5.5515018.32365HepG2UPF1
chr22735375627353801-3'-UTR,intron-Distal3.393864.17167HepG2ZC3H11A
chr22735547127355488-3'-UTR,CDS,intron-Distal3.824265.24452HepG2PPIG
chr22735524727355291-3'-UTR,CDS,intron-Distal,intron-Proximal3.500084.88100K562AQR
chr22735407327354112-3'-UTR,intron-Distal3.252894.96603K562UPF1
chr22735483527354886-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.472729.76362K562PRPF8
chr22735615627356224-5'-UTR,CDS,intron-Distal,intron-Proximal3.192765.54603K562PRPF8
chr22735733927357442-5'-UTR,intron-Distal3.287197.59005K562DDX3X
chr22735744327357494-5'-UTR,intron-Distal,intron-Proximal3.570194.60537HepG2NCBP2
chr22735614127356216-5'-UTR,CDS,intron-Distal,intron-Proximal3.0784311.26610HepG2BCLAF1
chr22735614427356209-5'-UTR,CDS,intron-Distal,intron-Proximal3.2568715.54271HepG2AQR
chr22735744227357508-5'-UTR,intron-Distal,intron-Proximal4.852674.66602K562DDX3X
chr22735571027355743-5'-UTR,CDS,intron-Distal,intron-Proximal3.529659.41803HepG2BCLAF1
chr22735612327356150-5'-UTR,CDS,intron-Distal5.153077.23718K562AQR
chr22735598427356020-5'-UTR,CDS,intron-Distal,intron-Proximal3.656308.54450HepG2PPIG
chr22735571027355738-5'-UTR,CDS,intron-Distal,intron-Proximal3.9082511.17337HepG2PPIG
chr22735573827355792-5'-UTR,CDS,intron-Distal,intron-Proximal4.2209416.55832HepG2PPIG
chr22735636027356405-5'-UTR,CDS,intron-Distal,intron-Proximal3.570858.04719HepG2AQR
chr22735735227357481-5'-UTR,intron-Distal,intron-Proximal5.2302924.71656HepG2DDX3X
chr22735725427357340-5'-UTR,CDS,intron-Distal4.1885910.03874HepG2DDX3X
chr22735571627355738-5'-UTR,CDS,intron-Distal3.141263.00343HepG2GRWD1
chr22735615027356228-5'-UTR,CDS,intron-Distal,intron-Proximal5.4939525.49283K562AQR
chr22735630027356401-5'-UTR,CDS,intron-Distal,intron-Proximal6.9738527.38231K562AQR
chr22735635127356402-5'-UTR,CDS,intron-Distal,intron-Proximal3.924278.47339HepG2PRPF8
chr22735616727356256-5'-UTR,CDS,intron-Distal,intron-Proximal3.785687.67169K562SF3B4
chr22735719827357249-CDS,intron-Distal4.334914.20997HepG2UPF1
chr22735627227356347-intron-Distal,intron-Proximal3.892945.03105K562BUD13
chr22735623727356287-intron-Distal,intron-Proximal4.492119.40826K562AQR
chr22735704227357110-intron-Distal3.595834.68605HepG2FASTKD2
chr22735703227357103-intron-Distal4.0360214.10870HepG2PRPF8
chr22735483827354876-intron-Distal,intron-Proximal4.932626.04760K562AQR
chr22735620927356342-intron-Distal,intron-Proximal6.1607823.26203HepG2AQR
chr22735450627354539-intron-Distal,intron-Proximal4.229053.93614HepG2AQR
chr22735710327357129-intron-Distal4.2673312.79935HepG2PRPF8
chr22735634127356367-intron-Distal,intron-Proximal3.477445.45876HepG2BCLAF1
chr22735704927357124-intron-Distal3.9032525.21350HepG2RBM22
chr22735706827357127-intron-Distal3.754964.51027K562BUD13
chr22735706327357134-intron-Distal5.1767314.19592K562AQR
chr22735700027357130-intron-Distal4.2380315.18802HepG2SUPV3L1
chr22735626227356307-intron-Distal,intron-Proximal3.303686.98138HepG2PRPF8
chr22735625827356377-intron-Distal,intron-Proximal3.403194.56654HepG2SUPV3L1
chr22735621927356298-intron-Distal,intron-Proximal4.4594811.55759HepG2BCLAF1
chr22735712927357155-intron-Distal4.676807.13970HepG2PRPF8
chr22735699327357151-intron-Distal4.2853452.75252HepG2EFTUD2
chr22735711827357155-intron-Distal3.956243.67894HepG2AQR
chr22735691827357131-intron-Distal3.2582313.17931K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PREB is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PREB is not available on ENCORE database.

  • 142 RBPs can affect the levels of PREB.  








The Knockdown/knockout RNA-Seq assay for PREB is not available on ENCORE database.





142 RBPs can affect the gene expression of PREB :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PREBENSG00000138073.9883.347401442.45710-0.707509.510607.67920HepG2AATF
PREBENSG00000138073.92105.684503023.32430-0.521804.858903.64420HepG2ABCF1
PREBENSG00000138073.91466.748602631.22840-0.8431020.7916019.47100HepG2ACO1
PREBENSG00000138073.9848.742601559.84920-0.8780012.8871010.96330HepG2ADAR
PREBENSG00000138073.92845.062005060.82330-0.8309011.1419010.14290HepG2AKAP1
PREBENSG00000138073.91664.932502935.33740-0.8181010.853708.94040HepG2AKAP8
PREBENSG00000138073.91619.678602264.41290-0.483406.056604.28380HepG2BUD13
PREBENSG00000138073.91422.131202516.79480-0.823508.096606.41800HepG2CCAR1
PREBENSG00000138073.92011.407403978.21050-0.9839018.7031016.90000HepG2CIRBP
PREBENSG00000138073.92026.707302488.85360-0.296302.953801.81560HepG2CPSF7
PREBENSG00000138073.9706.805901058.25640-0.582306.003804.51590HepG2CSTF2
PREBENSG00000138073.92136.189802591.08270-0.278503.347102.65380HepG2CELF1
PREBENSG00000138073.94248.481502785.783800.6088012.1530010.77690HepG2DAZAP1
PREBENSG00000138073.91548.647602433.33290-0.6519013.8851012.32370HepG2DDX19B
PREBENSG00000138073.91239.614501590.78850-0.359903.109402.39360HepG2DDX21
PREBENSG00000138073.9744.012801557.27200-1.0656023.1988020.83800HepG2DDX24
PREBENSG00000138073.92733.775804847.49630-0.8263012.7549011.50300HepG2DDX3X
PREBENSG00000138073.9908.014401604.20040-0.8211014.6609012.01890HepG2DDX52
PREBENSG00000138073.91041.093801684.76690-0.694407.333006.14450HepG2DDX55
PREBENSG00000138073.9800.163501520.22800-0.925906.565405.09040HepG2DDX59
PREBENSG00000138073.91555.794802517.27330-0.694209.729108.61670HepG2DKC1
PREBENSG00000138073.93033.183001570.670200.9494023.6376021.79860HepG2DNAJC21
PREBENSG00000138073.91839.927001556.851800.240903.334402.63080HepG2DNAJC2
PREBENSG00000138073.91262.179701914.00400-0.600706.621405.25710HepG2EEF2
PREBENSG00000138073.9884.010401465.35830-0.729106.663604.96930HepG2AGO1
PREBENSG00000138073.92369.387204003.02140-0.7566010.869309.74240HepG2EIF2S1
PREBENSG00000138073.91849.688202292.76060-0.309803.218501.94930HepG2EIF2S2
PREBENSG00000138073.91081.984301502.61840-0.473805.523504.06980HepG2EIF3G
PREBENSG00000138073.92954.765804423.36870-0.582105.920504.98680HepG2EIF4A3
PREBENSG00000138073.91858.065904307.61090-1.2131017.4635015.83470HepG2EIF4B
PREBENSG00000138073.95271.950202632.918801.0016022.6296020.51690HepG2EIF4G2
PREBENSG00000138073.91547.229302618.37540-0.7590011.129409.18300HepG2ESF1
PREBENSG00000138073.91357.343704138.28850-1.60820106.26510103.59940HepG2ETF1
PREBENSG00000138073.91953.052102570.83950-0.396503.873302.88490HepG2EWSR1
PREBENSG00000138073.92697.757001516.260500.831106.035204.45370HepG2FASTKD2
PREBENSG00000138073.91679.986503052.64060-0.861608.540207.27380HepG2FIP1L1
PREBENSG00000138073.92503.146003075.18750-0.296902.873502.07250HepG2FUBP3
PREBENSG00000138073.91219.319101739.99090-0.513003.271302.05420HepG2FUS
PREBENSG00000138073.92077.228304464.32640-1.1038022.5047020.74190HepG2FXR1
PREBENSG00000138073.91796.575304140.61630-1.2046023.5094021.66550HepG2G3BP1
PREBENSG00000138073.92263.054504396.71110-0.9582017.9252015.73050HepG2G3BP2
PREBENSG00000138073.9498.826001383.40580-1.4716029.9356027.45870HepG2GEMIN5
PREBENSG00000138073.91067.349001702.23210-0.673408.245006.48350HepG2GNB2L1
PREBENSG00000138073.9983.846501917.83870-0.963009.653107.59050HepG2GRSF1
PREBENSG00000138073.92003.899202511.83710-0.325904.857603.59900HepG2HDGF
PREBENSG00000138073.91124.048501585.71820-0.496405.363104.50520HepG2HNRNPA1
PREBENSG00000138073.91615.705002560.34350-0.6642016.7420014.83400HepG2HNRNPA2B1
PREBENSG00000138073.93174.310702301.044800.464108.721207.53680HepG2HNRNPF
PREBENSG00000138073.92332.749904194.38590-0.8464016.0100014.47200HepG2HNRNPK
PREBENSG00000138073.91002.361801448.11360-0.530805.084304.25740HepG2HNRNPLL
PREBENSG00000138073.91335.930002105.66060-0.656408.443106.93130HepG2HNRNPM
PREBENSG00000138073.91526.067801752.17270-0.199302.041501.51120HepG2HNRNPU
PREBENSG00000138073.93421.561202265.859200.5945010.672409.33960HepG2IGF2BP1
PREBENSG00000138073.93390.487204208.59650-0.311802.400101.76620HepG2IGF2BP2
PREBENSG00000138073.91583.020003950.59070-1.319407.770906.18660HepG2IGF2BP3
PREBENSG00000138073.92427.580001789.783500.4396011.7040010.31380HepG2ILF2
PREBENSG00000138073.91462.038602019.70870-0.466202.802001.47080HepG2ILF3
PREBENSG00000138073.92707.454204233.59540-0.644906.094004.55070HepG2KHSRP
PREBENSG00000138073.93047.555302405.033900.341504.452303.17140HepG2KIF1C
PREBENSG00000138073.91263.692601750.97210-0.470505.115503.45580HepG2LIN28B
PREBENSG00000138073.92557.307904465.89090-0.8043012.0079010.67740HepG2MAGOH
PREBENSG00000138073.91081.860701412.07970-0.384303.064201.37040HepG2MARK2
PREBENSG00000138073.92232.007704490.66920-1.0086016.3874014.94890HepG2MATR3
PREBENSG00000138073.91565.920502469.76530-0.6574010.015608.57160HepG2MSI2
PREBENSG00000138073.91040.206501477.15230-0.505902.828801.85020HepG2MTPAP
PREBENSG00000138073.92746.641704596.27340-0.7428010.141008.97160HepG2NCBP2
PREBENSG00000138073.91728.197602762.39180-0.6766014.3469012.67400HepG2NOL12
PREBENSG00000138073.91010.454901284.11760-0.345802.518101.80300HepG2NSUN2
PREBENSG00000138073.91144.508301893.70150-0.726504.312903.19000HepG2PABPC1
PREBENSG00000138073.92834.590704092.47150-0.529805.629404.61070HepG2PABPC4
PREBENSG00000138073.91291.426801734.32970-0.425406.802005.56680HepG2PARN
PREBENSG00000138073.92160.514804260.89090-0.9798046.1837044.27150HepG2PCBP1
PREBENSG00000138073.9660.370401647.02300-1.3185016.1105013.93040HepG2PCBP2
PREBENSG00000138073.91299.000902192.39490-0.7551020.5750018.81290HepG2PRPF4
PREBENSG00000138073.91212.590401731.30490-0.513803.023401.75650HepG2PRPF6
PREBENSG00000138073.9491.708201299.36730-1.4019025.8784023.80580HepG2PRPF8
PREBENSG00000138073.92078.523204335.52680-1.0606051.3333049.61920HepG2PTBP1
PREBENSG00000138073.91975.016402637.01840-0.417004.639103.89000HepG2PUF60
PREBENSG00000138073.92130.054302799.39780-0.394209.187208.23950HepG2PUM1
PREBENSG00000138073.93365.132202797.299300.266503.028902.32670HepG2PUM2
PREBENSG00000138073.91681.586202680.02060-0.6724013.2396012.06700HepG2PUS1
PREBENSG00000138073.92077.587704695.67230-1.1764048.1393046.15100HepG2QKI
PREBENSG00000138073.9916.995701589.02020-0.793205.201704.25080HepG2RAVER1
PREBENSG00000138073.92300.521003244.74020-0.496108.232706.85870HepG2RBM15
PREBENSG00000138073.91283.456303458.86500-1.4303067.2326065.35510HepG2RBM22
PREBENSG00000138073.92050.292204261.55280-1.0555030.5249028.46380HepG2RBM25
PREBENSG00000138073.91263.441901633.24720-0.370402.805801.73840HepG2RCC2
PREBENSG00000138073.91685.231904825.09910-1.51760102.16190100.09300HepG2NELFE
PREBENSG00000138073.92031.205904493.78990-1.1456062.5126060.41790HepG2RECQL
PREBENSG00000138073.92116.261201561.623700.438402.423801.53900HepG2RPS10
PREBENSG00000138073.9908.493801511.86800-0.7348011.5010010.35450HepG2RPS19
PREBENSG00000138073.91255.854201854.85790-0.562606.605505.40060HepG2RPS2
PREBENSG00000138073.91424.467202081.06130-0.546903.974303.01540HepG2RPS3A
PREBENSG00000138073.91402.083801893.48250-0.433504.263002.91560HepG2RPS5
PREBENSG00000138073.9746.423801285.31430-0.784108.537207.25660HepG2RRP9
PREBENSG00000138073.93901.188201560.377201.3219089.8178087.16060HepG2SAFB2
PREBENSG00000138073.91176.741601517.38150-0.366802.690701.76650HepG2SERBP1
PREBENSG00000138073.91823.727302824.52550-0.631105.062904.13180HepG2SF3A3
PREBENSG00000138073.92753.397304514.00270-0.7132026.1823024.67990HepG2SF3B4
PREBENSG00000138073.91368.975201819.64670-0.410608.324607.30400HepG2SMN1
PREBENSG00000138073.92287.687901622.319300.495703.417802.34050HepG2SMNDC1
PREBENSG00000138073.92164.921301548.348500.483503.380301.60290HepG2SND1
PREBENSG00000138073.93002.558503906.69880-0.379809.036108.27360HepG2SRFBP1
PREBENSG00000138073.91894.087704711.57640-1.3147087.9309086.12870HepG2SRSF1
PREBENSG00000138073.9801.236801542.40920-0.944908.762606.89950HepG2SRSF3
PREBENSG00000138073.91550.645902603.77500-0.7477013.9644012.70770HepG2SRSF5
PREBENSG00000138073.92980.184602260.745400.398507.249006.20580HepG2SRSF7
PREBENSG00000138073.92361.606403833.06220-0.6987025.8586024.49280HepG2SRSF9
PREBENSG00000138073.92398.299403392.00620-0.5001012.9116011.96440HepG2SSB
PREBENSG00000138073.91239.356201810.60220-0.546904.136102.76710HepG2STIP1
PREBENSG00000138073.92212.763502961.12100-0.420309.661308.61870HepG2SUCLG1
PREBENSG00000138073.91123.172101677.07420-0.578405.535704.63050HepG2SUPV3L1
PREBENSG00000138073.92101.804504234.76780-1.0107038.4742036.69880HepG2TAF15
PREBENSG00000138073.91729.341801411.783400.292602.062401.42410HepG2TARDBP
PREBENSG00000138073.9679.707601124.03200-0.725707.839906.32530HepG2TFIP11
PREBENSG00000138073.92826.911003891.36650-0.461107.145605.81360HepG2TIA1
PREBENSG00000138073.9806.681001702.49940-1.0776027.0366025.77040HepG2TIAL1
PREBENSG00000138073.91364.374401717.78690-0.332304.653503.96020HepG2TRIM56
PREBENSG00000138073.91110.070802610.85590-1.2339020.8500019.06690HepG2U2AF1
PREBENSG00000138073.92157.287102504.92690-0.215602.742902.04610HepG2UPF1
PREBENSG00000138073.91858.111202574.67960-0.470609.021007.25890HepG2UTP18
PREBENSG00000138073.91919.634502418.40140-0.333205.235304.45560HepG2UTP3
PREBENSG00000138073.91253.617501650.89820-0.397203.353402.55990HepG2XRN2
PREBENSG00000138073.91832.923102163.55600-0.239302.970002.27850HepG2ZC3H8
PREBENSG00000138073.92005.534702754.93350-0.4580012.7809011.82300HepG2ZNF622
PREBENSG00000138073.9955.787701177.13540-0.300502.793501.47670K562BCCIP
PREBENSG00000138073.9641.99150869.48670-0.437603.057401.94020K562CCAR1
PREBENSG00000138073.91236.09510992.312500.316802.627001.61370K562DDX3X
PREBENSG00000138073.92162.971501898.594500.188001.928101.36540K562DDX47
PREBENSG00000138073.9844.60500605.738900.479505.221204.14380K562EIF3G
PREBENSG00000138073.92144.235602518.83910-0.232302.234001.38620K562EIF4G2
PREBENSG00000138073.91374.719801119.143800.296602.165001.41280K562FIP1L1
PREBENSG00000138073.9672.36200991.40800-0.560204.594603.07660K562FKBP4
PREBENSG00000138073.91280.447501078.125900.248002.180201.63180K562FXR1
PREBENSG00000138073.9224.33060577.79160-1.3649014.2029012.32830K562G3BP2
PREBENSG00000138073.9640.624101028.32860-0.682806.741804.53660K562GEMIN5
PREBENSG00000138073.91087.791101509.29780-0.472506.574704.86250K562GLRX3
PREBENSG00000138073.9902.776001142.57950-0.339902.165201.62860K562HNRNPC
PREBENSG00000138073.91080.984701411.33030-0.384703.554901.41920K562HNRNPH1
PREBENSG00000138073.91278.33260920.576400.473603.292802.27060K562HNRNPM
PREBENSG00000138073.92294.392801517.230700.596607.609306.30760K562HSPD1
PREBENSG00000138073.9635.24080908.41540-0.516004.012002.20780K562ILF3
PREBENSG00000138073.91514.122801909.41590-0.334602.709901.89430K562KIF1C
PREBENSG00000138073.92122.701402684.88410-0.339002.760701.63320K562MSI2
PREBENSG00000138073.92121.752202755.06390-0.376803.378101.70720K562NOL12
PREBENSG00000138073.91432.354001763.08300-0.299704.941403.98400K562NSUN2
PREBENSG00000138073.9471.27280832.01590-0.820005.448204.06490K562PCBP2
PREBENSG00000138073.91212.703101706.22680-0.492604.261703.22820K562PCBP3
PREBENSG00000138073.91069.939001308.69650-0.290602.425401.67770K562POLR2G
PREBENSG00000138073.91732.897701270.542800.447604.395403.32890K562PPIG
PREBENSG00000138073.91305.051101024.397900.349202.442301.59820K562PSIP1
PREBENSG00000138073.91160.52890908.708000.352802.399401.77380K562PTBP1
PREBENSG00000138073.92400.595602922.93460-0.284002.681601.63320K562PUM1
PREBENSG00000138073.92409.370702864.20180-0.249502.554201.63030K562PUM2
PREBENSG00000138073.91223.633001738.53220-0.506707.574506.62360K562RBM15
PREBENSG00000138073.91422.811601016.639000.484803.728802.77680K562RPS19
PREBENSG00000138073.91459.500401739.76380-0.253402.643001.84530K562SF3A3
PREBENSG00000138073.9558.27590782.45530-0.487003.058202.03490K562SF3B1
PREBENSG00000138073.9820.85000600.883500.449904.254103.18870K562SF3B4
PREBENSG00000138073.91543.873801782.43020-0.207302.349601.47810K562SRPK2
PREBENSG00000138073.91197.82850890.914800.427003.175102.42210K562SRSF1
PREBENSG00000138073.91185.274001489.56860-0.329703.143001.52440K562SRSF9
PREBENSG00000138073.91637.792901312.708700.319103.104802.23340K562SYNCRIP
PREBENSG00000138073.9427.20120578.49320-0.437403.319202.44150K562U2AF2
PREBENSG00000138073.91306.064501599.61380-0.292502.472401.64290K562WDR3
PREBENSG00000138073.91365.792801663.44310-0.284403.803002.82100K562WDR43
PREBENSG00000138073.91581.204302047.21820-0.372603.614302.60260K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PREB is not available on ENCORE database.





18 RBPs can affect the splicing of PREB :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPREBENSG00000138073.9chr2-273550972735522427354877273549502735547027355595-0.144000.006310.09083excludedHepG2U2AF1
SEPREBENSG00000138073.9chr2-273545392735469927354307273543762735487727354950-0.100000.000290.00714excludedHepG2U2AF1
SEPREBENSG00000138073.9chr2-273563552735658927355984273562052735715427357534-0.051000.006940.09770excludedHepG2U2AF1
SEPREBENSG00000138073.9chr2-273545412735469927353658273543762735487727354950-0.071000.000680.03228excludedHepG2MATR3
SEPREBENSG00000138073.9chr2-273545392735469927353632273543762735487727354950-0.059000.000190.02489excludedHepG2SUPV3L1
SEPREBENSG00000138073.9chr2-273545412735469927353658273543762735487727354950-0.063000.002510.09548excludedHepG2PCBP1
SEPREBENSG00000138073.9chr2-273545392735469927354307273543762735487727354950-0.076000.000020.00134excludedHepG2HNRNPC
SEPREBENSG00000138073.9chr2-273550972735527127354877273549502735547027355595-0.055000.000210.00511excludedK562HNRNPC
A3SSPREBENSG00000138073.9chr2-2735509727355271273550972735522427355470273555950.055000.001630.03953longerHepG2U2AF2
A3SSPREBENSG00000138073.9chr2-2735509727355341273550972735527127355470273555950.061000.000000.00000longerK562AQR
A3SSPREBENSG00000138073.9chr2-2735599327356239273559932735620527356399273565220.072000.000410.00314longerK562AQR
A5SSPREBENSG00000138073.9chr2-2735507127355224273550972735522427354877273549500.064000.000000.00015longerK562AQR
RIPREBENSG00000138073.9chr2-2735598427356589273559842735620527356399273565890.058000.002170.08461includedHepG2BCCIP
RIPREBENSG00000138073.9chr2-2735453927354950273545392735469927354877273549500.071000.001080.02413includedHepG2PCBP2
RIPREBENSG00000138073.9chr2-2735598427356589273559842735620527356399273565890.179000.000000.00000includedHepG2PCBP2
RIPREBENSG00000138073.9chr2-2735453927354950273545392735469927354877273549500.055000.008760.07775includedHepG2SF3A3
RIPREBENSG00000138073.9chr2-2735453927354950273545392735469927354877273549500.063000.001080.02894includedHepG2UCHL5
RIPREBENSG00000138073.9chr2-2735453927354950273545392735469927354877273549500.072000.000540.00894includedHepG2PRPF8
RIPREBENSG00000138073.9chr2-2735598427356589273559842735620527356399273565890.177000.000000.00001includedHepG2PRPF8
RIPREBENSG00000138073.9chr2-2735598427356589273559842735620527356399273565890.079000.000010.00035includedHepG2IGF2BP3
RIPREBENSG00000138073.9chr2-2735598427356589273559842735620527356399273565890.056000.000000.00001includedHepG2TAF15
RIPREBENSG00000138073.9chr2-2735453927354950273545392735469927354877273549500.133000.004230.05214includedK562U2AF2
RIPREBENSG00000138073.9chr2-2735453927354950273545392735469927354877273549500.052000.006430.08525includedHepG2TIAL1
RIPREBENSG00000138073.9chr2-2735598427356589273559842735620527356399273565890.090000.000010.00947includedHepG2HLTF
RIPREBENSG00000138073.9chr2-2735598427356589273559842735620527356399273565890.058000.000320.00495includedHepG2RBM22
RIPREBENSG00000138073.9chr2-2735598427356589273559842735620527356399273565890.056000.016930.08513includedK562AQR
RIPREBENSG00000138073.9chr2-273559842735658927355984273562052735639927356589-0.075000.001240.02544excludedK562PTBP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PREB is not avaliable on ENCORE database.