PPARD

General Information

Gene Name : PPARD
Gene ID : ENSG00000112033.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PPARD)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PPARD	ENSG00000112033.13	1.95	5.38	3.67	ENCSR000AEF
HepG2	PPARD	ENSG00000112033.13	12.60	6.08	9.34	ENCSR985KAT
K562	PPARD	ENSG00000112033.13	8.21	6.16	7.19	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PPARD is not avaliable on ENCORE database.

Proteins bound to RNA

PPARD RNA is bound by 21 proteins.

CanvasJS.com

eCLIP assay for PPARD is not avaliable on ENCORE database.

21 proteins are bound to PPARD RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	35394066	35394212	+	3'-UTR	3.97244	27.47296	K562	PTBP1
chr6	35394067	35394209	+	3'-UTR	3.52844	22.55859	HepG2	PTBP1
chr6	35394091	35394229	+	3'-UTR	4.77219	14.32285	HepG2	PCBP2
chr6	35395860	35395916	+	3'-UTR	4.99213	11.84897	K562	PUM2
chr6	35392571	35392601	+	3'-UTR,intron-Proximal	5.84233	11.25363	K562	AQR
chr6	35331768	35331865	+	intron-Distal	3.34685	10.15363	K562	QKI
chr6	35310390	35310461	+	5'-UTR,intron-Proximal	3.80524	9.61734	HepG2	NCBP2
chr6	35392555	35392571	+	3'-UTR,CDS,intron-Proximal	5.52156	9.23760	K562	AQR
chr6	35350708	35350781	+	intron-Distal	3.45783	8.59767	K562	TIA1
chr6	35337932	35338000	+	intron-Distal	4.26593	8.19743	HepG2	HNRNPM
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 50 entries

eCLIP assay for PPARD is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PPARD is not available on ENCORE database.
126 RBPs can affect the levels of PPARD.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PPARD is not available on ENCORE database.

126 RBPs can affect the gene expression of PPARD :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PPARD	ENSG00000112033.9	1942.04100	579.58580	1.74440	94.13840	91.88930	HepG2	SRSF9
PPARD	ENSG00000112033.9	1828.62370	759.06280	1.26840	35.64260	33.23980	HepG2	RBM15
PPARD	ENSG00000112033.9	1663.18620	862.84340	0.94670	34.57860	33.20320	HepG2	ZNF622
PPARD	ENSG00000112033.9	1434.85760	657.79280	1.12510	33.57000	31.64860	HepG2	AUH
PPARD	ENSG00000112033.9	2032.61570	651.41910	1.64160	32.60190	30.82080	HepG2	DDX6
PPARD	ENSG00000112033.9	2185.47320	482.61610	2.17890	32.87760	30.02110	HepG2	PABPC1
PPARD	ENSG00000112033.9	952.60620	421.40560	1.17660	29.99410	28.37900	HepG2	TRIM56
PPARD	ENSG00000112033.9	939.33050	429.84210	1.12770	27.38500	25.63870	HepG2	HNRNPU
PPARD	ENSG00000112033.9	1125.61700	511.11890	1.13890	27.14790	25.29200	K562	EIF2S2
PPARD	ENSG00000112033.9	366.09240	982.61840	-1.42440	24.52040	22.90740	K562	PUS1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 149 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PPARD is not available on ENCORE database.

8 RBPs can affect the splicing of PPARD :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	PPARD	ENSG00000112033.9	chr6	+	35314843	35314927	35310390	35310458	35378763	35378994	-0.27000	0.00000	0.00001	excluded	K562	AGGF1
SE	PPARD	ENSG00000112033.9	chr6	+	35320705	35320827	35314843	35314927	35378763	35378994	-0.13800	0.00002	0.00236	excluded	HepG2	SRSF9
SE	PPARD	ENSG00000112033.9	chr6	+	35314843	35314927	35310390	35310458	35378763	35378994	-0.21300	0.00008	0.04699	excluded	K562	SMNDC1
SE	PPARD	ENSG00000112033.9	chr6	+	35314843	35314927	35310390	35310458	35378763	35378994	-0.20200	0.00028	0.01288	excluded	K562	UTP18
SE	PPARD	ENSG00000112033.9	chr6	+	35314843	35314927	35310390	35310458	35378763	35378994	-0.15700	0.00040	0.01533	excluded	K562	AKAP8L
SE	PPARD	ENSG00000112033.9	chr6	+	35389596	35389735	35378763	35378994	35391722	35391925	-0.30900	0.00071	0.02658	excluded	K562	UTP18
SE	PPARD	ENSG00000112033.9	chr6	+	35389596	35389735	35387903	35388058	35391722	35391925	-0.25000	0.00134	0.02171	excluded	K562	PUS1
SE	PPARD	ENSG00000112033.9	chr6	+	35316139	35316215	35314843	35314927	35378763	35378994	0.22800	0.00158	0.05242	included	K562	PRPF8
SE	PPARD	ENSG00000112033.9	chr6	+	35314843	35314927	35310390	35310458	35378763	35378994	-0.14500	0.00258	0.05572	excluded	K562	RBM15
SE	PPARD	ENSG00000112033.9	chr6	+	35314843	35314927	35310390	35310458	35378763	35378994	-0.14900	0.00674	0.07792	excluded	K562	PUS1

Showing 1 to 10 of 10 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PPARD

General Information

Functions

Localization

Domains (AlphaFold: PPARD)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PPARD is not avaliable on ENCORE database.

21 proteins are bound to PPARD RNA:

eCLIP assay for PPARD is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PPARD is not available on ENCORE database.

126 RBPs can affect the gene expression of PPARD :

The Knockdown/knockout RNA-Seq assay for PPARD is not available on ENCORE database.

8 RBPs can affect the splicing of PPARD :

The Knockdown/knockout RNA-Seq assay for PPARD is not avaliable on ENCORE database.