PHF1

General Information

Gene Name       : PHF1
Gene ID             : ENSG00000112511.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PHF1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PHF1ENSG00000112511.173.747.035.38ENCSR000AEF
HepG2PHF1ENSG00000112511.1729.1426.1427.64ENCSR985KAT
K562PHF1ENSG00000112511.1735.2730.5832.92ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PHF1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PHF1 RNA is bound by 34 proteins.  







eCLIP assay for PHF1 is not avaliable on ENCORE database.





34 proteins are bound to PHF1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr63338356333383592+3'-UTR,CDS,intron-Proximal3.823275.93727K562SF3B4
chr63338392333384029+3'-UTR3.726858.16650HepG2LSM11
chr63338392633383974+3'-UTR3.229343.52724HepG2PABPN1
chr63338337833383439+3'-UTR,CDS4.174137.55078HepG2PABPN1
chr63338412533384176+3'-UTR3.627004.94579K562ZC3H11A
chr63338386333383923+3'-UTR,CDS3.524244.51056HepG2LSM11
chr63338339833383437+3'-UTR,CDS3.703125.30777HepG2PPIG
chr63338339333383440+3'-UTR,CDS3.107183.79741HepG2GRWD1
chr63338393133384011+3'-UTR3.918424.14399K562LSM11
chr63338412633384176+3'-UTR3.542274.74382K562DDX6
chr63338394533384060+3'-UTR4.524155.46178K562ZC3H11A
chr63338362133383706+3'-UTR,CDS5.753718.61309K562PCBP1
chr63338412833384183+3'-UTR3.760743.44480HepG2TIA1
chr63338372933383834+3'-UTR,CDS3.601346.63093K562LSM11
chr63338371133383807+3'-UTR,CDS3.201486.79617K562NOLC1
chr63338372433383800+3'-UTR,CDS4.431783.94601K562PCBP1
chr63337884633378927+5'-UTR,intron-Distal,intron-Proximal3.542505.44438HepG2DDX3X
chr63337844233378552+5'-UTR,intron-Distal3.8378516.26280HepG2RBFOX2
chr63337857033378634+5'-UTR,intron-Distal3.144253.70770HepG2DDX59
chr63337848933378553+5'-UTR,intron-Distal4.254963.75888HepG2FAM120A
chr63337844733378574+5'-UTR,intron-Distal4.248703.57893K562EWSR1
chr63337879233378867+5'-UTR,intron-Distal,intron-Proximal4.734644.79919K562GEMIN5
chr63337857533378623+5'-UTR,intron-Distal3.060643.11118HepG2PRPF4
chr63337869133378806+5'-UTR,intron-Distal,intron-Proximal3.881653.06084HepG2HNRNPK
chr63337855333378611+5'-UTR,intron-Distal3.314324.88392HepG2RBFOX2
chr63337851033378544+5'-UTR,intron-Distal3.834664.58287K562PRPF8
chr63337870233378821+5'-UTR,intron-Distal,intron-Proximal5.120486.97910HepG2PCBP2
chr63338268533382784+CDS,intron-Proximal3.6144437.51111K562AQR
chr63338270933382801+CDS,intron-Proximal3.5042510.87012K562EFTUD2
chr63338033833380366+CDS5.7412613.60280HepG2PPIG
chr63338276133382824+CDS3.478935.53307K562ZNF622
chr63338251733382615+CDS,intron-Proximal4.748274.62931K562SRSF1
chr63338145233381587+CDS,intron-Proximal5.0404414.69293HepG2BUD13
chr63338182833381882+CDS4.4173217.99581K562DDX24
chr63338145633381540+CDS,intron-Proximal4.780927.09127HepG2PRPF4
chr63338251033382585+CDS4.1915413.89500K562DDX24
chr63338278433382837+CDS3.6962817.47597K562AQR
chr63338131033381340+CDS,intron-Proximal4.418468.68543HepG2PPIG
chr63338272833382834+CDS,intron-Proximal3.412147.80501HepG2PABPN1
chr63338209033382140+CDS3.4083611.46801K562DDX24
chr63338207933382139+CDS3.7542710.01989K562ZNF622
chr63338271733382828+CDS,intron-Proximal3.701496.40324K562UPF1
chr63338146633381520+CDS,intron-Proximal4.8037910.59108HepG2SF3A3
chr63338254433382604+CDS4.897867.48781HepG2PABPN1
chr63338260333382639+CDS,intron-Proximal3.980758.13013K562AQR
chr63338271533382767+CDS,intron-Proximal3.394067.32655K562UCHL5
chr63338273333382797+CDS,intron-Proximal3.468483.44826K562METAP2
chr63338131733381361+CDS,intron-Proximal3.504106.71596K562UCHL5
chr63338272733382833+CDS,intron-Proximal4.0517214.19121K562ZC3H11A
chr63338272133382859+CDS,intron-Proximal3.088035.54476K562SF3B4
chr63338144133381527+CDS,intron-Proximal3.7007115.14911K562SF3B4
chr63338146033381547+CDS,intron-Proximal4.7304410.18833HepG2EFTUD2
chr63338268633382881+CDS,intron-Proximal3.4185618.08360HepG2PRPF8
chr63338254733382592+CDS3.661919.02617HepG2PPIG
chr63338023433380307+CDS,intron-Proximal4.083747.33504K562SF3B4
chr63338272733382854+CDS,intron-Proximal3.9390812.26221HepG2BUD13
chr63338123833381299+CDS4.4789313.64823HepG2PPIG
chr63338230033382326+CDS,intron-Proximal3.135404.62864K562ZNF622
chr63338118633381221+CDS3.891326.41974HepG2PPIG
chr63338267833382841+CDS,intron-Proximal3.463517.62687K562DROSHA
chr63338249133382533+CDS,intron-Proximal4.606956.24021K562U2AF2
chr63338262333382799+CDS,intron-Proximal4.3553414.77747HepG2AQR
chr63338201933382028+CDS,intron-Proximal4.035694.41267HepG2PPIG
chr63338183633381881+CDS4.126107.27704K562ZNF622
chr63338145733381544+CDS,intron-Proximal4.1229022.46879K562DDX24
chr63338047433380501+CDS,intron-Proximal4.7301811.47295HepG2PPIG
chr63338272933382805+CDS,intron-Proximal4.3777713.81366HepG2PPIG
chr63338182433381868+CDS3.528124.52386HepG2PABPN1
chr63338152733381601+CDS3.173684.88012HepG2PPIG
chr63338104933381073+CDS4.127125.52342HepG2PPIG
chr63338267533382856+CDS,intron-Proximal3.0618110.22760K562RBFOX2
chr63338269733382738+CDS,intron-Proximal3.313553.88359K562MTPAP
chr63338269533382802+CDS,intron-Proximal3.403635.96785K562GTF2F1
chr63338131233381336+CDS,intron-Proximal4.211689.53524K562DDX24
chr63338269333382818+CDS,intron-Proximal4.4967223.73351K562BUD13
chr63338255633382590+CDS3.963085.47804K562ZNF622
chr63338268233382767+CDS,intron-Proximal4.169999.41150HepG2PRPF4
chr63338032633380364+CDS3.119915.44868K562ZNF622
chr63338208633382143+CDS6.4121217.20472HepG2PPIG
chr63338268633382847+CDS,intron-Proximal4.3959236.66793K562DDX24
chr63338182833381885+CDS4.1882013.24023HepG2PPIG
chr63338146733381512+intron-Proximal3.179286.55915K562BUD13
chr63338147133381509+intron-Proximal5.2109718.68284HepG2SF3B4
chr63338138733381451+intron-Proximal4.727076.46853K562EFTUD2
chr63338137233381412+intron-Proximal5.3321811.82907K562DDX24
chr63338220433382245+intron-Proximal4.439615.89229K562EFTUD2
chr63338146233381469+intron-Proximal6.0962917.99892HepG2SF3B4
chr63338267933382727+intron-Proximal3.586923.18550K562ZC3H11A
chr63338136133381421+intron-Proximal5.4744810.52873K562UCHL5
chr63338136833381429+intron-Proximal3.483397.76554K562BUD13
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PHF1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PHF1 is not available on ENCORE database.

  • 127 RBPs can affect the levels of PHF1.  








The Knockdown/knockout RNA-Seq assay for PHF1 is not available on ENCORE database.





127 RBPs can affect the gene expression of PHF1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PHF1ENSG00000112511.13943.785101169.72830-0.309602.151001.31810HepG2ABCF1
PHF1ENSG00000112511.131087.716601358.26300-0.320501.755401.32170HepG2AKAP1
PHF1ENSG00000112511.131611.700301048.279100.6205012.9928011.70040HepG2AUH
PHF1ENSG00000112511.13791.611301019.89960-0.365604.600203.78420HepG2CKAP4
PHF1ENSG00000112511.13897.426501307.93820-0.543402.347201.64640HepG2CNOT7
PHF1ENSG00000112511.13635.82940434.859700.548001.898401.31720HepG2CPSF6
PHF1ENSG00000112511.13281.36040383.87850-0.448202.632601.58010HepG2CSTF2
PHF1ENSG00000112511.131400.47860983.186700.5103010.563109.25970HepG2DAZAP1
PHF1ENSG00000112511.13693.20340943.49710-0.444706.259005.07870HepG2DDX19B
PHF1ENSG00000112511.13389.30810609.73880-0.647305.543804.61800HepG2DDX21
PHF1ENSG00000112511.13457.23220597.20600-0.385302.438301.58560HepG2DDX24
PHF1ENSG00000112511.132148.956801117.842100.9428012.3194011.12700HepG2DDX6
PHF1ENSG00000112511.13784.53250542.350500.532504.451703.22020HepG2DHX30
PHF1ENSG00000112511.13758.46270976.02620-0.363803.740802.97600HepG2DKC1
PHF1ENSG00000112511.13943.77770562.283100.747108.502807.32390HepG2DNAJC21
PHF1ENSG00000112511.13422.94590741.96320-0.810905.666204.38210HepG2EEF2
PHF1ENSG00000112511.131155.95930929.263200.314802.028701.32350HepG2EIF4G2
PHF1ENSG00000112511.132157.886501203.576300.8422013.6095012.44080HepG2ETF1
PHF1ENSG00000112511.131624.842601111.289700.548004.800603.93520HepG2G3BP1
PHF1ENSG00000112511.13363.70400606.66280-0.738103.784202.14910HepG2HLTF
PHF1ENSG00000112511.13817.18640631.470200.371902.246301.61500HepG2HNRNPC
PHF1ENSG00000112511.13993.80470670.569800.567507.944306.80600HepG2HNRNPF
PHF1ENSG00000112511.131460.474301125.728000.375502.933702.21460HepG2HNRNPK
PHF1ENSG00000112511.13936.69510470.345300.993804.502703.71860HepG2HNRNPLL
PHF1ENSG00000112511.13864.75960660.314600.389003.080802.31910HepG2IGF2BP1
PHF1ENSG00000112511.13864.79220640.751300.432502.890302.14260HepG2ILF2
PHF1ENSG00000112511.13782.60160932.53830-0.252902.427501.47210HepG2KIF1C
PHF1ENSG00000112511.131393.67800837.035600.735406.568105.27630HepG2LARP4
PHF1ENSG00000112511.13748.819801205.24190-0.686606.235805.31860HepG2MATR3
PHF1ENSG00000112511.13729.14840417.121200.805603.590602.73820HepG2NSUN2
PHF1ENSG00000112511.132046.803901195.781200.775303.967702.89250HepG2PABPC1
PHF1ENSG00000112511.131413.469801098.366200.363802.445901.76360HepG2PABPC4
PHF1ENSG00000112511.13810.074601128.53960-0.478306.695305.81410HepG2PCBP1
PHF1ENSG00000112511.13715.51100559.487500.354802.360501.67440HepG2PPIL4
PHF1ENSG00000112511.131259.25230678.694200.8916021.0755019.29250HepG2PRPF4
PHF1ENSG00000112511.13302.02530471.31040-0.642004.612003.59750HepG2PRPF8
PHF1ENSG00000112511.13902.861001148.36230-0.347003.533102.93130HepG2PTBP1
PHF1ENSG00000112511.13767.90800988.01870-0.363604.213903.51500HepG2PUM1
PHF1ENSG00000112511.131778.588801243.638400.516107.326906.38200HepG2QKI
PHF1ENSG00000112511.131652.371701128.706900.549807.220406.17320HepG2RBM25
PHF1ENSG00000112511.13695.458101277.99110-0.8778019.2201018.04430HepG2NELFE
PHF1ENSG00000112511.13805.953501190.32200-0.562608.750607.74630HepG2RECQL
PHF1ENSG00000112511.13952.28980567.452600.746805.198403.92590HepG2RPS10
PHF1ENSG00000112511.13913.015601314.36610-0.525702.229501.51160HepG2RPS3A
PHF1ENSG00000112511.13831.35780558.607400.573505.736304.86140HepG2SAFB2
PHF1ENSG00000112511.13877.163401190.13160-0.440202.396201.77000HepG2SF3A3
PHF1ENSG00000112511.13784.77770465.493100.753404.285303.42490HepG2SF3B1
PHF1ENSG00000112511.13938.114001195.53760-0.349803.827803.15020HepG2SF3B4
PHF1ENSG00000112511.13859.91380589.572200.544403.409702.33410HepG2SMNDC1
PHF1ENSG00000112511.13817.29450517.962700.657902.274001.56880HepG2SNRNP70
PHF1ENSG00000112511.131623.134701136.195700.514509.740608.95660HepG2SRFBP1
PHF1ENSG00000112511.13478.655701247.90520-1.3824042.5146041.14630HepG2SRSF1
PHF1ENSG00000112511.131176.17780918.979200.355904.525403.75890HepG2SRSF5
PHF1ENSG00000112511.13953.55620658.830800.533306.916705.89710HepG2SRSF7
PHF1ENSG00000112511.131165.811901015.257000.199401.791101.33000HepG2SRSF9
PHF1ENSG00000112511.13847.54160986.47940-0.219001.756201.32460HepG2SSB
PHF1ENSG00000112511.131595.925001143.695700.480602.496001.46000HepG2STIP1
PHF1ENSG00000112511.13959.54550608.443700.657104.496603.66530HepG2SUPV3L1
PHF1ENSG00000112511.13846.33130458.697300.883606.069005.05380HepG2TARDBP
PHF1ENSG00000112511.13912.76350609.378200.582806.117405.42650HepG2TIAL1
PHF1ENSG00000112511.13858.12580614.990400.480503.763303.12760HepG2TRIM56
PHF1ENSG00000112511.131375.808601010.127500.445603.501202.79950HepG2U2AF1
PHF1ENSG00000112511.131089.49530385.858501.497405.970704.47040HepG2U2AF2
PHF1ENSG00000112511.13566.60860359.379500.656704.600303.61710HepG2UCHL5
PHF1ENSG00000112511.131252.980501055.464900.247402.488301.82010HepG2UPF1
PHF1ENSG00000112511.131034.30780556.967000.892906.441704.86640HepG2UPF2
PHF1ENSG00000112511.13893.077701084.86990-0.280702.580701.56230HepG2UTP18
PHF1ENSG00000112511.13654.813201019.00980-0.6380010.091709.06100HepG2UTP3
PHF1ENSG00000112511.13802.19670669.784300.260202.187201.57970HepG2ZC3H8
PHF1ENSG00000112511.132134.913401160.809200.8789035.6712034.28110HepG2ZNF622
PHF1ENSG00000112511.132653.952601510.321900.8132026.7503025.09840K562AGGF1
PHF1ENSG00000112511.132637.386701659.609700.6682010.450008.21030K562AKAP8
PHF1ENSG00000112511.132930.404801571.557000.8988012.0975010.60090K562AKAP8L
PHF1ENSG00000112511.132489.931901512.802900.7188011.2372010.17180K562AQR
PHF1ENSG00000112511.131100.10940692.519200.667603.341602.38110K562BOP1
PHF1ENSG00000112511.131113.34910819.779200.441503.813602.30030K562CIRBP
PHF1ENSG00000112511.131724.322201281.804500.427803.176501.61560K562CKAP4
PHF1ENSG00000112511.131684.805001049.580400.682704.346402.97050K562CNOT7
PHF1ENSG00000112511.131369.05230736.342800.8946016.0589014.13230K562CPSF6
PHF1ENSG00000112511.13711.64490570.451200.319002.386201.41440K562CSTF2
PHF1ENSG00000112511.132388.269901958.324800.286202.746701.77500K562CELF1
PHF1ENSG00000112511.131609.708001170.766200.459206.797104.86330K562DDX21
PHF1ENSG00000112511.131311.39600868.529300.594407.954706.10210K562DDX3X
PHF1ENSG00000112511.131669.460501314.759200.344504.588603.77710K562DDX47
PHF1ENSG00000112511.131098.79620880.597100.319303.153401.73200K562DDX6
PHF1ENSG00000112511.131970.144501691.116700.220202.173801.40850K562DKC1
PHF1ENSG00000112511.13942.85910647.275300.542604.483503.30500K562EFTUD2
PHF1ENSG00000112511.131192.244101002.431000.250102.075201.43700K562EIF2S2
PHF1ENSG00000112511.131030.23910817.230900.334103.242701.97350K562EIF4B
PHF1ENSG00000112511.131027.05290792.122700.374603.668802.15170K562EWSR1
PHF1ENSG00000112511.131116.55050774.543100.527503.284002.35580K562FIP1L1
PHF1ENSG00000112511.131254.13320749.218800.743109.261107.64640K562FMR1
PHF1ENSG00000112511.13758.73360943.70170-0.314702.599502.00900K562FXR1
PHF1ENSG00000112511.13311.81840576.27810-0.886103.399202.60040K562G3BP2
PHF1ENSG00000112511.131249.62870703.023000.8298012.1162010.43880K562GPKOW
PHF1ENSG00000112511.131780.013501335.720400.414204.132903.21280K562GRSF1
PHF1ENSG00000112511.131247.65770994.554900.327002.838601.75200K562HNRNPA1
PHF1ENSG00000112511.132208.928401170.838700.915705.210103.35500K562HNRNPA2B1
PHF1ENSG00000112511.131474.78490684.155801.1080022.7754021.14350K562HNRNPC
PHF1ENSG00000112511.131002.04890611.078800.713408.640106.54440K562HNRNPF
PHF1ENSG00000112511.13879.87150637.160400.465503.217202.20880K562HNRNPM
PHF1ENSG00000112511.131604.472501049.993000.611606.136204.96260K562HSPD1
PHF1ENSG00000112511.131251.93600765.316400.709906.550504.68710K562IGF2BP2
PHF1ENSG00000112511.131034.44750778.254000.410403.443402.07440K562IGF2BP3
PHF1ENSG00000112511.132324.197401667.819600.478706.289404.92940K562KIF1C
PHF1ENSG00000112511.131010.99250662.894400.608806.456604.21740K562LARP7
PHF1ENSG00000112511.131013.56480694.159200.546004.632702.63870K562LIN28B
PHF1ENSG00000112511.13802.78310610.342800.395302.977801.38040K562LSM11
PHF1ENSG00000112511.132308.714401596.509800.532106.735804.77010K562MAK16
PHF1ENSG00000112511.132401.894201868.378600.362303.678002.60480K562MBNL1
PHF1ENSG00000112511.131016.04810686.230200.566104.754603.58840K562METAP2
PHF1ENSG00000112511.131358.582601050.521800.370904.878703.82770K562MTPAP
PHF1ENSG00000112511.131951.656501309.597600.575504.502003.29040K562NAA15
PHF1ENSG00000112511.131148.17820906.078600.341503.121101.81660K562NCBP2
PHF1ENSG00000112511.131682.671301167.170700.5276012.9122011.46370K562NSUN2
PHF1ENSG00000112511.131070.52270673.811600.667806.223003.82380K562NUSAP1
PHF1ENSG00000112511.132659.821301023.930401.3771011.104808.66560K562PABPN1
PHF1ENSG00000112511.131077.35750668.046000.689408.378205.86660K562PHF6
PHF1ENSG00000112511.13835.588401091.73360-0.385803.717502.78300K562POLR2G
PHF1ENSG00000112511.131419.72800879.386100.690906.528705.17310K562PPIG
PHF1ENSG00000112511.132425.255701217.121200.994605.467203.20130K562PPP1R8
PHF1ENSG00000112511.131051.62790613.452600.777509.449407.56600K562PSIP1
PHF1ENSG00000112511.133899.754701558.563401.3231035.8262033.81680K562PUS1
PHF1ENSG00000112511.132682.395201518.576900.8207021.5374019.82160K562RBM15
PHF1ENSG00000112511.132512.094801259.683400.995705.343903.00740K562RBM39
PHF1ENSG00000112511.13901.46770559.865900.687108.215206.50530K562RCC2
PHF1ENSG00000112511.13836.13650641.494200.382202.066901.36550K562RPS19
PHF1ENSG00000112511.132058.53270936.282501.136505.580603.68410K562SF1
PHF1ENSG00000112511.131778.719501151.778900.6269012.6784011.03410K562SF3A3
PHF1ENSG00000112511.131005.66060668.611100.588802.652201.69940K562SF3B1
PHF1ENSG00000112511.13876.58150598.557700.550302.165901.40940K562SF3B4
PHF1ENSG00000112511.132221.791801141.246000.961005.083703.09770K562SFPQ
PHF1ENSG00000112511.132192.498101075.462101.027505.698903.72890K562SNRNP200
PHF1ENSG00000112511.13985.19060530.720300.8924011.954309.43180K562SRFBP1
PHF1ENSG00000112511.131040.98750723.306700.525204.994103.50840K562SRSF5
PHF1ENSG00000112511.131400.322901044.766400.422505.700804.00200K562SRSF7
PHF1ENSG00000112511.131231.58620929.290600.406202.668001.44520K562STAU1
PHF1ENSG00000112511.132046.889101286.284100.670102.741601.32630K562SUPT6H
PHF1ENSG00000112511.131179.16080609.666700.9516011.460409.35390K562SUPV3L1
PHF1ENSG00000112511.13867.571801095.07130-0.336002.887102.04780K562SYNCRIP
PHF1ENSG00000112511.131347.51620774.875000.798204.507603.59960K562TARDBP
PHF1ENSG00000112511.131073.70140747.482200.522405.679804.44080K562TIA1
PHF1ENSG00000112511.131154.11750590.018200.9679012.6588010.55020K562TIAL1
PHF1ENSG00000112511.13951.31120733.752300.374502.704101.62720K562TRA2A
PHF1ENSG00000112511.131196.43540627.007600.932107.666405.90720K562TRIM56
PHF1ENSG00000112511.131771.424701444.611000.294103.171401.80610K562TROVE2
PHF1ENSG00000112511.13760.82810557.847100.447602.428101.41460K562U2AF1
PHF1ENSG00000112511.13961.49170645.352400.575104.861703.47160K562UCHL5
PHF1ENSG00000112511.131653.839301237.580100.418206.955305.87450K562UPF1
PHF1ENSG00000112511.132475.512801580.210600.647503.362801.88860K562UTP18
PHF1ENSG00000112511.131354.103701058.951300.354603.218102.27910K562WDR3
PHF1ENSG00000112511.131356.689801101.233800.300903.880102.88960K562WDR43
PHF1ENSG00000112511.132445.329501704.166600.520906.645505.21970K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PHF1 is not available on ENCORE database.





18 RBPs can affect the splicing of PHF1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPHF1ENSG00000112511.13chr6+333827313338292133382512333826063338301133383106-0.297000.000730.01613excludedK562SRSF1
SEPHF1ENSG00000112511.13chr6+333815123338160833381185333813343338181733381886-0.156000.005100.07722excludedHepG2U2AF1
SEPHF1ENSG00000112511.13chr6+333815123338160833381185333813343338181733381886-0.158000.000020.01190excludedK562PUM1
SEPHF1ENSG00000112511.13chr6+3338301133383106333827313338292133383366333834470.083000.000090.00175includedHepG2U2AF2
SEPHF1ENSG00000112511.13chr6+333815123338160833381185333813343338181733381886-0.300000.000000.00002excludedHepG2U2AF2
SEPHF1ENSG00000112511.13chr6+3338301133383106333827313338292133383366333834470.093000.000040.00402includedHepG2SFPQ
SEPHF1ENSG00000112511.13chr6+333815123338160833381185333813343338181733381886-0.241000.000870.04609excludedK562EFTUD2
SEPHF1ENSG00000112511.13chr6+333827313338292133382512333826063338301133383106-0.384000.000000.00001excludedHepG2SRSF1
SEPHF1ENSG00000112511.13chr6+333827313338292133382512333826063338301133383106-0.161000.000000.00016excludedK562HNRNPC
SEPHF1ENSG00000112511.13chr6+333815123338160833381185333813343338181733381886-0.333000.000000.00009excludedK562HNRNPC
A3SSPHF1ENSG00000112511.13chr6+3338116033381334333811853338133433380938333810730.076000.000000.00002longerK562AQR
A5SSPHF1ENSG00000112511.13chr6+333825013338292133382501333826063338301133383106-0.326000.000010.00071shorterHepG2SRSF1
A5SSPHF1ENSG00000112511.13chr6+333825013338292133382501333826063338301133383106-0.174000.000000.00074shorterK562HNRNPC
A5SSPHF1ENSG00000112511.13chr6+333825013338292133382501333826063338301133383106-0.246000.000160.01208shorterK562SRSF1
RIPHF1ENSG00000112511.13chr6+3338181733382063333818173338188633382019333820630.122000.001160.01529includedHepG2SF3A3
RIPHF1ENSG00000112511.13chr6+3338250133382921333825013338260633382731333829210.344000.000040.01048includedK562HNRNPK
RIPHF1ENSG00000112511.13chr6+3338250133382921333825013338260633382731333829210.223000.004780.07706includedK562RBM22
RIPHF1ENSG00000112511.13chr6+3338250133382921333825013338260633382731333829210.136000.006890.05752includedK562AKAP8L
RIPHF1ENSG00000112511.13chr6+3338250133382921333825013338260633382742333829210.206000.010950.08263includedHepG2TAF15
RIPHF1ENSG00000112511.13chr6+3338100033381231333810003338107333381185333812310.269000.000000.00000includedHepG2U2AF1
RIPHF1ENSG00000112511.13chr6+3338250133382921333825013338260633382742333829210.287000.000020.00056includedHepG2RBM22
RIPHF1ENSG00000112511.13chr6+3338250133382921333825013338260633382731333829210.284000.000190.00547includedHepG2SRSF9
RIPHF1ENSG00000112511.13chr6+3338250133382921333825013338260633382731333829210.230000.000010.00006includedK562AQR
RIPHF1ENSG00000112511.13chr6+3338181733382063333818173338188633382019333820630.197000.000000.00000includedK562AQR
MXEPHF1ENSG00000112511.13chr6+33382742333829213338303733383106333825013338260633383366333834470.145000.000980.022191includedHepG2FTO
MXEPHF1ENSG00000112511.13chr6+3338301133383106333833663338344733382742333829213338358633384230-0.115000.002010.078912includedK562SF3B1
MXEPHF1ENSG00000112511.13chr6+3338201933382143333822533338232133381817333818863338250133382606-0.112000.008570.055872includedK562AQR
MXEPHF1ENSG00000112511.13chr6+3338274233382921333830373338310633382501333826063338336633383447-0.124000.002780.083942includedHepG2BCCIP
MXEPHF1ENSG00000112511.13chr6+3338301133383106333833663338344733382742333829213338358633384230-0.117000.001070.078182includedK562PUM1
MXEPHF1ENSG00000112511.13chr6+33383011333831063338336633383447333825013338260633383586333842300.082000.000000.000061includedK562HNRNPC
MXEPHF1ENSG00000112511.13chr6+33382742333829213338304733383106333825123338260633383366333834470.161000.000080.069211includedHepG2PPIG
MXEPHF1ENSG00000112511.13chr6+33382742333829213338301133383106333825013338260633383366333834470.111000.000140.089701includedHepG2PPIG
MXEPHF1ENSG00000112511.13chr6+33382742333829213338303733383106333825013338260633383366333834470.130000.000110.082141includedHepG2PPIG

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PHF1 is not avaliable on ENCORE database.