PDS5A

General Information

Gene Name       : PDS5A
Gene ID             : ENSG00000121892.14
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: PDS5A)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PDS5AENSG00000121892.1441.5037.0539.27ENCSR000AEF
HepG2PDS5AENSG00000121892.1418.3633.2325.79ENCSR985KAT
K562PDS5AENSG00000121892.1442.4747.0544.76ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PDS5A is not avaliable on ENCORE database.



Proteins bound to RNA

  • PDS5A RNA is bound by 44 proteins.  







eCLIP assay for PDS5A is not avaliable on ENCORE database.





44 proteins are bound to PDS5A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr43982630739826360-3'-UTR,intron-Distal3.667035.44797K562ZC3H11A
chr43982598439826069-3'-UTR,intron-Distal3.247885.54628K562ZC3H11A
chr43982665939826733-3'-UTR,intron-Distal4.025273.97692K562IGF2BP1
chr43989986639899975-3'-UTR,intron-Distal,intron-Proximal4.6534214.66647K562KHSRP
chr43982705939827090-3'-UTR,intron-Distal4.930565.68196HepG2BCLAF1
chr43990572739905812-3'-UTR,CDS,intron-Distal,intron-Proximal3.7156612.60692HepG2BCLAF1
chr43986456439864693-3'-UTR,CDS,intron-Distal,intron-Proximal4.2270720.90201HepG2BCLAF1
chr43990396439903995-3'-UTR,CDS,intron-Distal,intron-Proximal3.070804.51789K562UCHL5
chr43990399539904051-3'-UTR,CDS,intron-Distal3.264318.39218K562UCHL5
chr43990396639903995-3'-UTR,CDS,intron-Distal,intron-Proximal3.003713.89662K562BUD13
chr43982460339824703-3'-UTR,intron-Distal6.6439924.06609K562PUM2
chr43990204439902128-3'-UTR,CDS,intron-Distal,intron-Proximal3.305624.83522HepG2ZNF800
chr43982457539824641-3'-UTR,intron-Distal4.524963.74891K562DDX55
chr43990401439904045-3'-UTR,CDS,intron-Distal4.634605.94293HepG2BCLAF1
chr43982648339826567-3'-UTR,intron-Distal4.3062250.05929K562PUM2
chr43986855939868671-3'-UTR,CDS,intron-Distal,intron-Proximal3.393557.22866HepG2U2AF2
chr43982604639826104-3'-UTR,intron-Distal4.633474.18952HepG2SUB1
chr43990203839902120-3'-UTR,CDS,intron-Distal,intron-Proximal3.469377.20311HepG2PPIG
chr43986495639865000-3'-UTR,CDS,intron-Distal3.6391910.26109HepG2BCLAF1
chr43982683139826878-3'-UTR,intron-Distal3.527146.58258HepG2PCBP2
chr43982563039825741-3'-UTR,intron-Distal3.959919.76876K562YBX3
chr43990208339902127-3'-UTR,CDS,intron-Distal3.8653913.87674HepG2BCLAF1
chr43982706039827161-3'-UTR,CDS,intron-Distal3.822339.35995K562SF3B4
chr43990204539902128-3'-UTR,CDS,intron-Distal,intron-Proximal3.433098.17760K562UCHL5
chr43986848939868540-3'-UTR,CDS,intron-Distal3.208416.50801HepG2BCLAF1
chr43990204539902080-3'-UTR,CDS,intron-Distal,intron-Proximal3.083535.54854HepG2GRWD1
chr43990396539903997-3'-UTR,CDS,intron-Distal,intron-Proximal3.9397012.38345HepG2BCLAF1
chr43982631039826364-3'-UTR,intron-Distal3.7071012.34851K562PUM2
chr43982597339826107-3'-UTR,intron-Distal3.049175.31996HepG2FUBP3
chr43990406139904081-3'-UTR,CDS,intron-Distal,intron-Proximal3.266626.20035HepG2BCLAF1
chr43982690739826956-3'-UTR,intron-Distal4.576286.56044K562IGF2BP1
chr43990566039905696-3'-UTR,CDS,intron-Distal,intron-Proximal5.5931110.24913HepG2BCLAF1
chr43982607239826137-3'-UTR,intron-Distal3.656026.14837K562ZC3H11A
chr43990569039905767-3'-UTR,CDS,intron-Distal3.436323.46619K562GRWD1
chr43982598439826063-3'-UTR,intron-Distal3.085025.17412K562PABPC4
chr43990208039902128-3'-UTR,CDS,intron-Distal,intron-Proximal3.071407.26251HepG2GRWD1
chr43990571439905795-3'-UTR,CDS,intron-Distal4.162603.29312HepG2FXR2
chr43990204639902083-3'-UTR,CDS,intron-Distal,intron-Proximal3.728839.28980HepG2BCLAF1
chr43997934739979398-5'-UTR,intron-Distal4.520135.04680K562HNRNPM
chr43997907439979111-5'-UTR,intron-Distal3.507524.93175HepG2GRWD1
chr43997941039979448-5'-UTR,intron-Distal4.7847522.63861HepG2DDX3X
chr43990992939910019-5'-UTR,CDS,intron-Distal,intron-Proximal3.171878.13694K562AQR
chr43997821139978239-5'-UTR,intron-Distal,intron-Proximal4.204284.23295HepG2GRWD1
chr43997821139978236-5'-UTR,intron-Distal3.978375.96588K562ZNF622
chr43997907639979103-5'-UTR,intron-Distal3.091693.24636K562DDX3X
chr43997907639979115-5'-UTR,intron-Distal3.605274.61051HepG2DDX3X
chr43997944839979510-5'-UTR,intron-Distal5.4493015.31047HepG2DDX3X
chr43997939839979496-5'-UTR,intron-Distal4.1534310.93207K562HNRNPM
chr43997907439979115-5'-UTR,intron-Distal3.342336.36905K562FXR2
chr43991005839910157-5'-UTR,CDS,intron-Distal3.7120917.92852HepG2BCLAF1
chr43997911139979176-5'-UTR,intron-Distal,intron-Proximal3.627774.32211K562DDX3X
chr43997935339979410-5'-UTR,intron-Distal4.8615123.68939HepG2DDX3X
chr43991001339910058-5'-UTR,CDS,intron-Distal,intron-Proximal4.0893014.75464HepG2BCLAF1
chr43997907639979118-5'-UTR,intron-Distal3.370465.46795K562FMR1
chr43997935039979411-5'-UTR,intron-Distal5.145154.54356K562DDX3X
chr43997911839979162-5'-UTR,intron-Distal,intron-Proximal3.806633.05875K562RBM15
chr43997916239979259-5'-UTR,intron-Distal,intron-Proximal5.9554917.66846HepG2DDX3X
chr43987873339878762-CDS,intron-Distal4.372203.28461K562BUD13
chr43990039339900443-CDS,intron-Distal,intron-Proximal5.084686.91190HepG2PPIG
chr43987105239871084-CDS,intron-Distal,intron-Proximal3.564913.50696K562BUD13
chr43990004939900103-CDS,intron-Distal3.445318.57930HepG2BCLAF1
chr43987101539871058-CDS,intron-Distal3.228555.12958K562UCHL5
chr43990006339900105-CDS,intron-Distal3.359855.04943K562ZNF622
chr43984743439847510-CDS,intron-Distal,intron-Proximal4.049228.23042HepG2U2AF2
chr43990010739900150-CDS,intron-Distal,intron-Proximal3.660684.96634HepG2PPIG
chr43992962939929664-CDS,intron-Distal3.591985.96427K562FMR1
chr43992431139924374-CDS,intron-Distal,intron-Proximal4.779526.24021K562U2AF2
chr43988135839881454-CDS,intron-Distal,intron-Proximal4.357098.94398K562UCHL5
chr43987873139878774-CDS,intron-Distal,intron-Proximal3.510017.65255K562YBX3
chr43987465139874764-CDS,intron-Distal4.0105618.33962HepG2BCLAF1
chr43992194239922013-CDS,intron-Distal5.1988613.34895HepG2BCLAF1
chr43992958439929629-CDS,intron-Distal3.904238.18410K562FMR1
chr43990039639900443-CDS,intron-Distal,intron-Proximal3.7504012.82131HepG2BCLAF1
chr43985114339851234-CDS,intron-Distal3.9232515.82151HepG2BCLAF1
chr43991866539918773-CDS,intron-Distal,intron-Proximal4.489415.80976K562FXR1
chr43991523039915241-CDS,intron-Distal,intron-Proximal3.317304.34695HepG2BCLAF1
chr43992953839929606-CDS,intron-Distal,intron-Proximal4.7245110.85246HepG2PRPF8
chr43984744939847508-CDS,intron-Distal,intron-Proximal4.031284.29034K562U2AF2
chr43992424939924282-CDS,intron-Distal3.965796.81385HepG2BCLAF1
chr43992424139924249-CDS,intron-Distal,intron-Proximal4.264126.22576HepG2BCLAF1
chr43992194439922019-CDS,intron-Distal4.025647.70480K562YBX3
chr43991531939915369-CDS,intron-Distal,intron-Proximal4.518594.76200K562BUD13
chr43991186339911901-CDS,intron-Distal,intron-Proximal3.886067.65975HepG2BCLAF1
chr43983977239839823-CDS,intron-Distal3.498597.74581HepG2BCLAF1
chr43988134739881379-CDS,intron-Distal,intron-Proximal3.773047.06377K562YBX3
chr43985054339850653-CDS,intron-Distal,intron-Proximal3.303356.26770K562KHSRP
chr43990039739900446-CDS,intron-Distal,intron-Proximal3.320489.61195K562ZNF622
chr43990012739900148-CDS,intron-Distal3.511107.01246HepG2BCLAF1
chr43987874139878754-CDS,intron-Distal4.422593.45943HepG2BCLAF1
chr43989187239891901-CDS,intron-Distal4.354604.16170K562UCHL5
chr43991191839911956-CDS,intron-Distal3.930567.23562HepG2BCLAF1
chr43992951639929589-CDS,intron-Distal,intron-Proximal3.682235.31369K562PRPF8
chr43988137539881454-CDS,intron-Distal,intron-Proximal4.7728120.54387HepG2BCLAF1
chr43985048639850544-CDS,intron-Distal4.138089.37631HepG2BCLAF1
chr43991873339918806-CDS,intron-Distal3.1665710.09669HepG2BCLAF1
chr43992972239929781-CDS,intron-Distal,intron-Proximal3.738708.31280HepG2GRWD1
chr43997807639978124-CDS,intron-Distal4.534624.50960HepG2GRWD1
chr43990000539900044-CDS,intron-Distal,intron-Proximal3.533786.74947HepG2BCLAF1
chr43987460539874618-CDS,intron-Distal,intron-Proximal3.898134.09885HepG2BCLAF1
chr43992958739929646-CDS,intron-Distal3.0527810.49889HepG2BCLAF1
chr43987590839875935-CDS,intron-Distal,intron-Proximal3.562417.42278HepG2BCLAF1
chr43992842139928491-CDS,intron-Distal,intron-Proximal3.069825.19836HepG2U2AF2
chr43992745539927486-CDS,intron-Distal,intron-Proximal3.5803410.08874HepG2BCLAF1
chr43997805939978085-CDS,intron-Distal,intron-Proximal3.175083.67697K562YBX3
chr43989186839891922-CDS,intron-Distal,intron-Proximal3.3752710.76374HepG2BCLAF1
chr43992964239929709-CDS,intron-Distal3.036003.23402HepG2UCHL5
chr43987861139878641-CDS,intron-Distal,intron-Proximal3.083554.23325HepG2BCLAF1
chr43984356739843645-CDS,intron-Distal,intron-Proximal4.0541012.52201HepG2BCLAF1
chr43992963939929722-CDS,intron-Distal3.4926513.93565HepG2GRWD1
chr43992432539924382-CDS,intron-Distal,intron-Proximal3.732087.00923K562SF3B4
chr43997888839979026-intron-Distal4.738156.51015K562CSTF2T
chr43997644439976541-intron-Distal5.3559111.49134HepG2ILF3
chr43985693039856993-intron-Distal3.644495.56133HepG2SUGP2
chr43992622039926251-intron-Distal3.258384.23794K562HNRNPL
chr43997871739978798-intron-Distal4.234654.21433K562PRPF8
chr43984737139847428-intron-Distal,intron-Proximal4.734823.62536K562AQR
chr43986515639865208-intron-Distal,intron-Proximal4.062553.42844K562KHSRP
chr43986431639864407-intron-Distal,intron-Proximal3.319453.53952HepG2KHSRP
chr43991764839917816-intron-Distal3.923813.15106HepG2HNRNPC
chr43990736839907487-intron-Distal3.8004229.50355K562MATR3
chr43985780939857823-intron-Distal3.512178.28385HepG2SUGP2
chr43991159239911665-intron-Distal,intron-Proximal4.499525.25062HepG2CSTF2
chr43989037839890447-intron-Distal3.379763.64762HepG2QKI
chr43990987739909906-intron-Distal3.230956.60316K562KHSRP
chr43985693439856993-intron-Distal3.489463.10961HepG2MATR3
chr43997871039978818-intron-Distal4.124027.39596K562CSTF2T
chr43994466939944766-intron-Distal4.171714.38266K562TARDBP
chr43990990639909976-intron-Distal,intron-Proximal5.2055213.34700K562KHSRP
chr43995050239950563-intron-Distal4.239064.18168HepG2ILF3
chr43992937439929505-intron-Distal,intron-Proximal3.159907.09257K562EFTUD2
chr43992364439923767-intron-Distal3.110586.24581HepG2U2AF2
chr43997872339978803-intron-Distal3.209184.61952HepG2FAM120A
chr43983747939837566-intron-Distal4.358963.19026HepG2HNRNPL
chr43983744939837548-intron-Distal5.1361814.72922HepG2QKI
chr43991560039915691-intron-Distal4.270074.31512K562KHSRP
chr43997853839978623-intron-Distal3.777433.37414K562CSTF2T
chr43990736139907477-intron-Distal5.4159574.87432K562PTBP1
chr43997873139978783-intron-Distal3.977593.02324K562XRN2
chr43987715139877325-intron-Distal4.104533.48210HepG2HNRNPL
chr43983748339837565-intron-Distal4.042383.80299K562HNRNPL
chr43990199839902043-intron-Distal,intron-Proximal4.800453.62536K562AQR
chr43997872739978793-intron-Distal3.869213.02711K562EWSR1
chr43985742639857540-intron-Distal4.071993.98115K562MATR3
chr43992937439929453-intron-Distal3.530827.41728K562PRPF8
chr43996117739961269-intron-Distal4.021443.71997HepG2ILF3
chr43984757739847726-intron-Distal,intron-Proximal4.208947.34371K562KHSRP
chr43992830839928330-intron-Distal,intron-Proximal4.108796.19377K562KHSRP
chr43991042539910495-intron-Distal3.201053.61097K562ILF3
chr43997892639979014-intron-Distal4.151933.84437HepG2PRPF4
chr43992522139925289-intron-Distal3.429694.41411K562TARDBP
chr43985635639856416-intron-Distal3.546345.61949K562KHSRP
chr43985039339850444-intron-Distal,intron-Proximal3.995623.12843K562PRPF8
chr43991171239911821-intron-Distal,intron-Proximal3.015524.88652K562KHSRP
chr43990056039900652-intron-Distal4.818508.27925K562KHSRP
chr43985078939850896-intron-Distal3.627955.38829K562KHSRP
chr43990808339908147-intron-Distal3.154864.93942K562PTBP1
chr43985681539856884-intron-Distal3.746256.26907HepG2SUGP2
chr43985947939859553-intron-Distal4.465755.04879HepG2SUGP2
chr43985702039857077-intron-Distal3.457214.35402HepG2SUGP2
chr43992735339927418-intron-Distal,intron-Proximal3.917688.86655K562KHSRP
chr43985761339857669-intron-Distal3.593725.30446HepG2SUGP2
chr43997872539978795-intron-Distal4.040313.87340HepG2CSTF2T
chr43992733139927414-intron-Distal,intron-Proximal4.192765.85201K562PRPF8
chr43984772639847789-intron-Distal3.889803.25538K562KHSRP
chr43990737839907484-intron-Distal5.1945037.69864HepG2PTBP1
chr43991497839915065-intron-Distal4.148104.31512K562KHSRP
chr43986436939864420-intron-Distal,intron-Proximal3.793723.26999K562KHSRP
chr43997871439978819-intron-Distal3.734846.02098HepG2PRPF4
chr43990469239904770-intron-Distal4.143944.37030K562KHSRP
chr43985667839856733-intron-Distal4.103928.11138K562KHSRP
chr43993843139938519-intron-Distal4.291623.35169HepG2U2AF2
chr43990383439903962-intron-Distal,intron-Proximal3.699065.56048K562KHSRP
chr43997151939971570-intron-Distal4.245624.02199K562HNRNPL
chr43985657639856678-intron-Distal5.6305415.36238K562KHSRP
chr43985739439857457-intron-Distal3.633214.61322HepG2MATR3
chr43990737239907481-intron-Distal3.8590910.82383HepG2U2AF2
chr43986262339862683-intron-Distal4.086723.84404HepG2HNRNPC
chr43983914339839206-intron-Distal3.515954.35635K562PRPF8
chr43985776039857809-intron-Distal3.461057.94241HepG2SUGP2
chr43983942339839476-intron-Distal,intron-Proximal3.145735.62171K562AQR
chr43991507539915138-intron-Distal,intron-Proximal3.431833.90146K562KHSRP
chr43997892539979013-intron-Distal3.813345.61307K562GTF2F1
chr43997889139979001-intron-Distal3.299145.15121K562DROSHA
chr43991157939911663-intron-Distal,intron-Proximal3.469766.01711K562CSTF2T
chr43984734639847404-intron-Distal,intron-Proximal3.246654.13620K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PDS5A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PDS5A is not available on ENCORE database.

  • 116 RBPs can affect the levels of PDS5A.  








The Knockdown/knockout RNA-Seq assay for PDS5A is not available on ENCORE database.





116 RBPs can affect the gene expression of PDS5A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PDS5AENSG00000121892.101957.676902513.80970-0.360706.862905.99180HepG2ACO1
PDS5AENSG00000121892.101572.529903505.83350-1.1567019.2157017.94460HepG2AKAP1
PDS5AENSG00000121892.102205.950002874.72640-0.382002.476201.48890HepG2AKAP8
PDS5AENSG00000121892.102210.562802525.65770-0.192202.069501.39260HepG2AKAP8L
PDS5AENSG00000121892.102164.171002900.82350-0.422603.726002.81900HepG2ASCC1
PDS5AENSG00000121892.102553.842403733.45380-0.5478014.6007013.24260HepG2AUH
PDS5AENSG00000121892.101430.807502290.82600-0.679003.513502.45930HepG2BCCIP
PDS5AENSG00000121892.102396.253903067.51100-0.356303.461302.80060HepG2BOP1
PDS5AENSG00000121892.102454.602503022.36280-0.300203.448702.60030HepG2CALR
PDS5AENSG00000121892.102012.643102513.30830-0.320506.114605.19680HepG2CKAP4
PDS5AENSG00000121892.102002.194202827.37650-0.497902.853302.07610HepG2CNOT7
PDS5AENSG00000121892.101858.998902816.12750-0.599207.667406.56990HepG2CPSF6
PDS5AENSG00000121892.101995.897002589.38700-0.375603.173701.98770HepG2CPSF7
PDS5AENSG00000121892.101904.131802436.38340-0.355605.012403.64200HepG2YBX3
PDS5AENSG00000121892.102645.506803017.74900-0.189902.034801.46780HepG2CELF1
PDS5AENSG00000121892.102345.932303244.99440-0.4681014.0707012.61770HepG2DAZAP1
PDS5AENSG00000121892.102425.370603358.41040-0.469604.427203.64980HepG2DDX3X
PDS5AENSG00000121892.101407.668002252.20790-0.678003.733902.85100HepG2DDX55
PDS5AENSG00000121892.101845.071702822.60920-0.613408.093506.45860HepG2DDX5
PDS5AENSG00000121892.101697.440702884.73900-0.765108.980707.93330HepG2DDX6
PDS5AENSG00000121892.101603.271902392.42940-0.5775011.9300010.55180HepG2DNAJC21
PDS5AENSG00000121892.101298.400902371.18220-0.8689036.3353034.22570HepG2DNAJC2
PDS5AENSG00000121892.101328.318901877.42110-0.499204.853203.38660HepG2EFTUD2
PDS5AENSG00000121892.101471.628102773.37300-0.9142014.2545012.97830HepG2EIF2S1
PDS5AENSG00000121892.101524.183303065.00160-1.0079014.7775013.32280HepG2EIF4A3
PDS5AENSG00000121892.102451.718003066.60680-0.322902.847202.02090HepG2EIF4G2
PDS5AENSG00000121892.103497.316604286.43530-0.293504.784604.03300HepG2ETF1
PDS5AENSG00000121892.101381.145302456.48110-0.8307016.7640014.83420HepG2EWSR1
PDS5AENSG00000121892.101010.994901633.75120-0.6924011.865409.47390HepG2FAM120A
PDS5AENSG00000121892.101935.527101520.900400.347703.278102.42690HepG2FUBP3
PDS5AENSG00000121892.102425.318803092.16040-0.350402.797202.10170HepG2FXR1
PDS5AENSG00000121892.101914.777602868.58880-0.583205.940804.98170HepG2G3BP1
PDS5AENSG00000121892.101303.318101627.72640-0.320702.224701.42810HepG2GEMIN5
PDS5AENSG00000121892.102356.710403192.25980-0.437803.739103.00380HepG2GPKOW
PDS5AENSG00000121892.101694.201302391.09220-0.497103.338101.82820HepG2HNRNPA0
PDS5AENSG00000121892.101616.103802415.34820-0.579708.273807.24260HepG2HNRNPA1
PDS5AENSG00000121892.102314.739102982.15920-0.365505.163903.95330HepG2HNRNPA2B1
PDS5AENSG00000121892.101359.493102686.58800-0.9827020.9235019.20480HepG2HNRNPC
PDS5AENSG00000121892.102206.569302745.89180-0.315504.598203.70190HepG2HNRNPF
PDS5AENSG00000121892.102394.728402904.34040-0.278302.122701.50520HepG2HNRNPK
PDS5AENSG00000121892.102053.159902955.99410-0.5258016.9322015.39190HepG2HNRNPL
PDS5AENSG00000121892.102422.590003046.43600-0.330602.677702.05660HepG2HNRNPLL
PDS5AENSG00000121892.101650.748102668.82890-0.6931021.1959019.62570HepG2HNRNPU
PDS5AENSG00000121892.102339.124403131.19280-0.420702.545601.37110HepG2HSPD1
PDS5AENSG00000121892.102115.750602703.93420-0.353903.995003.13890HepG2IGF2BP1
PDS5AENSG00000121892.102178.018402726.12730-0.323806.957205.84800HepG2ILF2
PDS5AENSG00000121892.101979.736902756.42420-0.477502.997801.61250HepG2ILF3
PDS5AENSG00000121892.102012.763302694.35150-0.420802.875601.65450HepG2KHDRBS1
PDS5AENSG00000121892.101955.909602297.96520-0.232503.441402.30310HepG2KIF1C
PDS5AENSG00000121892.102429.192204399.09000-0.8567010.363708.76010HepG2LARP4
PDS5AENSG00000121892.102218.021303093.23860-0.479804.526703.69280HepG2MAGOH
PDS5AENSG00000121892.101250.042201913.34250-0.614104.196002.91250HepG2METAP2
PDS5AENSG00000121892.102017.493102569.68370-0.349002.587901.80410HepG2MSI2
PDS5AENSG00000121892.102446.205903183.91090-0.380302.907902.26010HepG2NCBP2
PDS5AENSG00000121892.101953.743002966.83390-0.602703.890602.20230HepG2NKRF
PDS5AENSG00000121892.102430.285503217.72050-0.404906.254105.11100HepG2NOL12
PDS5AENSG00000121892.101328.664902067.35760-0.637803.096001.93540HepG2NONO
PDS5AENSG00000121892.10921.883101366.74950-0.568103.154001.44700HepG2PA2G4
PDS5AENSG00000121892.101697.434102584.30410-0.606403.511802.50380HepG2PABPC1
PDS5AENSG00000121892.102226.916802835.66120-0.348602.597601.89590HepG2PABPC4
PDS5AENSG00000121892.101724.776902641.73410-0.6151015.7880014.05200HepG2PARN
PDS5AENSG00000121892.102373.585702750.84000-0.212802.578501.98690HepG2PCBP1
PDS5AENSG00000121892.101212.513301511.79860-0.318303.001001.71840HepG2PKM
PDS5AENSG00000121892.101609.596002380.38920-0.5645011.196109.76930HepG2PPIL4
PDS5AENSG00000121892.102187.590003071.54760-0.489606.703105.82870HepG2PUF60
PDS5AENSG00000121892.102007.704003258.18040-0.6985015.5664014.05510HepG2PUM2
PDS5AENSG00000121892.102110.522102560.48480-0.278804.425503.68160HepG2PUS1
PDS5AENSG00000121892.102973.082303488.00760-0.230402.148401.38020HepG2RBM15
PDS5AENSG00000121892.102759.148503582.68110-0.376806.066805.37260HepG2RBM22
PDS5AENSG00000121892.102325.590502957.77800-0.346903.040502.32980HepG2RPLP0
PDS5AENSG00000121892.101453.607701778.78290-0.291302.403501.82600HepG2RPS19
PDS5AENSG00000121892.101669.340902839.36450-0.766307.473406.17480HepG2RPS3A
PDS5AENSG00000121892.101663.976702376.73390-0.5143012.9313011.69000HepG2SAFB2
PDS5AENSG00000121892.102093.067702771.71330-0.405209.812008.71770HepG2SMN1
PDS5AENSG00000121892.101889.840402632.88700-0.478403.237302.19210HepG2SMNDC1
PDS5AENSG00000121892.104259.451203041.799500.4856013.5194012.64380HepG2SRSF1
PDS5AENSG00000121892.102644.691503032.63820-0.197502.467201.87160HepG2SRSF5
PDS5AENSG00000121892.101965.379302697.69710-0.456909.061407.92890HepG2SRSF7
PDS5AENSG00000121892.103951.937203513.392500.169602.183501.71420HepG2SSB
PDS5AENSG00000121892.101462.204702120.80020-0.536503.863002.42300HepG2STAU1
PDS5AENSG00000121892.102785.681803449.00300-0.308106.479805.59840HepG2SUCLG1
PDS5AENSG00000121892.102256.868603158.24110-0.484802.840701.49460HepG2SUGP2
PDS5AENSG00000121892.101453.024902143.96960-0.561204.653203.44930HepG2SUPT6H
PDS5AENSG00000121892.101573.585402242.27390-0.510902.251701.63300HepG2SUPV3L1
PDS5AENSG00000121892.103183.964302734.120400.219602.311101.79040HepG2TAF15
PDS5AENSG00000121892.101842.144602969.43840-0.6888010.479409.20160HepG2TARDBP
PDS5AENSG00000121892.101526.756402593.41700-0.7644017.0460015.99690HepG2TIAL1
PDS5AENSG00000121892.101649.504002616.43810-0.6656019.2221017.90540HepG2TRIM56
PDS5AENSG00000121892.102427.153902793.14130-0.202602.534901.86120HepG2UPF1
PDS5AENSG00000121892.101862.615602543.23970-0.449302.793501.69010HepG2XPO5
PDS5AENSG00000121892.101372.804902207.26560-0.685103.704002.87330HepG2XRN2
PDS5AENSG00000121892.102764.853803071.92870-0.151902.020201.53330HepG2ZNF622
PDS5AENSG00000121892.106320.486807795.59270-0.302602.802401.56960K562ABCF1
PDS5AENSG00000121892.104199.386605177.16770-0.302005.866005.08810K562AGGF1
PDS5AENSG00000121892.102345.125303391.28910-0.5322011.666108.68400K562AKAP1
PDS5AENSG00000121892.104145.589005387.00800-0.377904.360003.53300K562AKAP8L
PDS5AENSG00000121892.103243.853603712.48260-0.194702.583901.65990K562BCLAF1
PDS5AENSG00000121892.103995.203704879.79470-0.288602.545001.31840K562CIRBP
PDS5AENSG00000121892.105689.390306519.46240-0.196502.355401.34150K562CPEB4
PDS5AENSG00000121892.108818.276106747.202400.386109.119008.02020K562DDX47
PDS5AENSG00000121892.102934.120103774.41150-0.363306.795604.86860K562EIF2S1
PDS5AENSG00000121892.102444.461503590.02310-0.554507.834706.45440K562EIF4A3
PDS5AENSG00000121892.102453.939403133.72350-0.352804.643102.89640K562EWSR1
PDS5AENSG00000121892.104062.310005603.60620-0.464105.908404.63550K562FIP1L1
PDS5AENSG00000121892.103271.208404444.78450-0.442304.922703.77390K562FMR1
PDS5AENSG00000121892.104979.867103733.472700.415508.495707.50670K562FXR1
PDS5AENSG00000121892.105568.995103879.448500.521504.209903.29590K562G3BP2
PDS5AENSG00000121892.103299.353504170.82020-0.338103.539402.64600K562GPKOW
PDS5AENSG00000121892.104028.172106723.58560-0.7391010.955609.42270K562GRSF1
PDS5AENSG00000121892.101960.380103450.30040-0.8156017.7058016.27680K562HNRNPC
PDS5AENSG00000121892.103508.068604551.56370-0.375702.708601.69540K562IGF2BP2
PDS5AENSG00000121892.103727.318604630.17100-0.312902.976001.72670K562IGF2BP3
PDS5AENSG00000121892.103405.787404071.18150-0.257502.365501.55850K562METAP2
PDS5AENSG00000121892.104113.861204775.79140-0.215203.293002.41410K562MTPAP
PDS5AENSG00000121892.102557.028803396.70760-0.409703.774802.00180K562NUSAP1
PDS5AENSG00000121892.104308.118206361.09690-0.562207.942806.39210K562PPIG
PDS5AENSG00000121892.102046.309003093.47560-0.596208.766306.96320K562PSIP1
PDS5AENSG00000121892.107384.528509345.62030-0.339802.349701.46340K562PUM2
PDS5AENSG00000121892.103494.671104458.51890-0.351403.267602.34800K562RBM22
PDS5AENSG00000121892.102331.404002822.00930-0.275502.654601.68380K562RCC2
PDS5AENSG00000121892.104431.815403480.083200.348702.867102.03470K562RPS19
PDS5AENSG00000121892.103330.894504035.46520-0.276803.006702.11410K562SF3B4
PDS5AENSG00000121892.102143.314802675.22940-0.319802.908701.84870K562SRFBP1
PDS5AENSG00000121892.104827.301405364.33260-0.152202.235301.38490K562SRPK2
PDS5AENSG00000121892.103298.920204303.55630-0.383503.357802.18170K562SRSF5
PDS5AENSG00000121892.104392.584203513.552600.322004.034903.03810K562SYNCRIP
PDS5AENSG00000121892.102874.212204612.60090-0.682408.060706.77570K562TARDBP
PDS5AENSG00000121892.103373.824804449.27790-0.399205.403904.20090K562TIA1
PDS5AENSG00000121892.102448.980003160.60280-0.368003.684802.56300K562TRIM56
PDS5AENSG00000121892.103236.317403884.92960-0.263502.753001.95120K562U2AF2
PDS5AENSG00000121892.104506.840005626.50680-0.320107.099306.00880K562UPF1
PDS5AENSG00000121892.105696.488805006.373900.186202.869402.00730K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PDS5A is not available on ENCORE database.





18 RBPs can affect the splicing of PDS5A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPDS5AENSG00000121892.10chr4-398684803986863539864955398650793987101339871082-0.067000.000950.02005excludedK562SF3B4
SEPDS5AENSG00000121892.10chr4-398394753983982839824482398271083984356739843676-0.081000.000260.01264excludedK562PRPF8
SEPDS5AENSG00000121892.10chr4-399283943992848139927455399275533992958039929784-0.160000.002140.05601excludedK562AKAP8L
SEPDS5AENSG00000121892.10chr4-399242413992436839921938399220193992958039929820-0.097000.000000.00003excludedK562AQR
SEPDS5AENSG00000121892.10chr4-399118633991195839910014399101603991523039915428-0.063000.000000.00000excludedK562AQR
SEPDS5AENSG00000121892.10chr4-399003133990044539900008399001483990204539902127-0.078000.000300.00440excludedK562AQR
SEPDS5AENSG00000121892.10chr4-398463163984642139843567398436763984743739847500-0.088000.000460.00632excludedK562AQR
SEPDS5AENSG00000121892.10chr4-398759083987603239874605398747643987861239878791-0.057000.000010.00022excludedK562AQR
SEPDS5AENSG00000121892.10chr4-398684803986861739864955398650793987101339871082-0.055000.000000.00009excludedK562AQR
SEPDS5AENSG00000121892.10chr4-399274553992755339924241399243683992958039929784-0.085000.002760.03915excludedK562PUS1
SEPDS5AENSG00000121892.10chr4-398684803986861739864955398650793987101339871082-0.056000.000000.00005excludedK562PUS1
SEPDS5AENSG00000121892.10chr4-399118633991195839910014399101603991523039915346-0.079000.000010.00019excludedK562PUS1
SEPDS5AENSG00000121892.10chr4-398394753983982839824482398271083984356739843676-0.069000.000820.04424excludedK562EFTUD2
SEPDS5AENSG00000121892.10chr4-399118633991195839910014399101603991523039915346-0.064000.001420.02977excludedK562U2AF1
SEPDS5AENSG00000121892.10chr4-399274553992755339924241399243683992958039929784-0.101000.002220.06159excludedK562UTP18
SEPDS5AENSG00000121892.10chr4-399118633991197639910014399101603991523039915346-0.079000.001280.04101excludedK562UTP18
SEPDS5AENSG00000121892.10chr4-399283943992848139927455399275533992958039929784-0.102000.000610.02548excludedK562TARDBP
SEPDS5AENSG00000121892.10chr4-399283943992848139927455399275533992958039929784-0.137000.004400.08313excludedK562RBM15
SEPDS5AENSG00000121892.10chr4-399274553992755339924241399243683992958039929784-0.130000.001190.03183excludedK562AGGF1
SEPDS5AENSG00000121892.10chr4-399118633991195839910014399101603991523039915346-0.055000.000320.01143excludedK562AGGF1
A3SSPDS5AENSG00000121892.10chr4-3986383839863981398638383986395339864488398647120.084000.000000.00000longerK562AQR
A3SSPDS5AENSG00000121892.10chr4-3986848039868652398684803986861739871013398710820.100000.000000.00000longerK562AQR
A3SSPDS5AENSG00000121892.10chr4-3985113939851319398511393985127239863838398639530.067000.000000.00000longerK562AQR
A3SSPDS5AENSG00000121892.10chr4-3990031339900524399003133990044539902045399021690.058000.000000.00000longerK562AQR
A3SSPDS5AENSG00000121892.10chr4-3990396639904107399039663990408039905659399057380.102000.000000.00000longerK562AQR
A3SSPDS5AENSG00000121892.10chr4-3991186339912038399118633991195839915230399154160.092000.000000.00000longerK562AQR
A3SSPDS5AENSG00000121892.10chr4-3990000839900243399000083990014839900396399004450.055000.000000.00001longerK562AQR
A3SSPDS5AENSG00000121892.10chr4-3990204539902169399020453990212739903966399041070.051000.000020.00024longerK562AQR
A3SSPDS5AENSG00000121892.10chr4-3987868639878791398786863987877339881347398814530.086000.000000.00000longerK562AQR
A3SSPDS5AENSG00000121892.10chr4-398649553986507939864955398650503986848039868591-0.058000.000020.00019shorterK562AQR
A3SSPDS5AENSG00000121892.10chr4-398649553986507939864955398650503986848039868617-0.056000.000100.01695shorterK562HNRNPC
MXEPDS5AENSG00000121892.10chr4-39874605398747643987590839876032398710133987108239878612398787730.116000.000030.002931includedK562LIN28B
MXEPDS5AENSG00000121892.10chr4-39911863399119763991523039915416399100413991016039918667399188080.066000.000000.000001includedK562AQR
MXEPDS5AENSG00000121892.10chr4-39911863399119763991523039915378399100413991016039918667399188080.081000.000000.000001includedK562AQR
MXEPDS5AENSG00000121892.10chr4-39911863399119763991523039915428399100413991016039918667399188080.063000.000000.000001includedK562AQR
MXEPDS5AENSG00000121892.10chr4-39911863399119583991523039915416399100143991016039918667399188080.064000.000000.000001includedK562AQR
MXEPDS5AENSG00000121892.10chr4-39911863399119583991523039915378399100143991016039918667399188080.079000.000000.000001includedK562AQR
MXEPDS5AENSG00000121892.10chr4-39911863399119583991523039915428399100143991016039918667399188080.061000.000000.000001includedK562AQR
MXEPDS5AENSG00000121892.10chr4-3984356739843676398474373984750039824482398271083985047039850590-0.054000.000910.008422includedK562AQR
MXEPDS5AENSG00000121892.10chr4-3984356739843676398462753984642139824482398271083984743739847500-0.087000.000420.019332includedHepG2SF3A3
MXEPDS5AENSG00000121892.10chr4-39874605398747643987590839876032398710133987108239878612398787730.101000.001190.062241includedK562LARP7
MXEPDS5AENSG00000121892.10chr4-39874605398747643987590839876032398710133987108239878612398787730.121000.001320.018761includedHepG2SFPQ
MXEPDS5AENSG00000121892.10chr4-39843567398436763984627539846421398394753983982839847437398475000.103000.000000.000401includedK562SBDS
MXEPDS5AENSG00000121892.10chr4-3984743739847500398504703985059039846275398464213985113939851272-0.106000.000490.082782includedK562PUM2
MXEPDS5AENSG00000121892.10chr4-39874605398747643987590839876032398710133987108239878612398787730.115000.000430.010381includedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PDS5A is not avaliable on ENCORE database.