PDAP1

General Information

Gene Name       : PDAP1
Gene ID             : ENSG00000106244.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PDAP1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PDAP1ENSG00000106244.1283.36136.17109.76ENCSR000AEF
HepG2PDAP1ENSG00000106244.12157.59110.43134.01ENCSR985KAT
K562PDAP1ENSG00000106244.12256.88211.73234.31ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PDAP1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PDAP1 RNA is bound by 43 proteins.  







eCLIP assay for PDAP1 is not avaliable on ENCORE database.





43 proteins are bound to PDAP1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr79899398998994014-3'-UTR,intron-Distal5.0777014.74774K562UCHL5
chr79899395498993989-3'-UTR,intron-Distal3.4182017.54798K562UCHL5
chr79899407398994127-3'-UTR,intron-Distal,intron-Proximal4.839704.30926HepG2LARP4
chr79899379798993860-3'-UTR,intron-Distal3.4087818.00447K562UPF1
chr79899804098998048-3'-UTR,CDS,intron-Distal,intron-Proximal3.6916921.44943K562UCHL5
chr79899548598995496-3'-UTR,CDS,intron-Distal3.237476.46814K562ZNF622
chr79899548398995500-3'-UTR,CDS,intron-Distal,intron-Proximal3.2636410.70472K562ZNF800
chr79899407498994141-3'-UTR,intron-Distal,intron-Proximal4.277938.41080HepG2PRPF4
chr79899562798995636-3'-UTR,CDS,intron-Distal,intron-Proximal3.764319.11524K562UCHL5
chr79899385698993876-3'-UTR,intron-Distal5.3323849.05196K562PABPC4
chr79899553498995585-3'-UTR,CDS,intron-Distal,intron-Proximal4.223016.84754HepG2GRWD1
chr79899435298994359-3'-UTR,CDS,intron-Distal3.747395.53232K562PUM1
chr79899381198993857-3'-UTR,intron-Distal3.795106.96709K562DDX6
chr79899407498994139-3'-UTR,intron-Distal,intron-Proximal3.5345611.16433K562FASTKD2
chr79899798298998048-3'-UTR,CDS,intron-Distal,intron-Proximal3.0933926.77402K562ZNF622
chr79899409198994120-3'-UTR,intron-Distal,intron-Proximal4.1833616.97654K562ZNF622
chr79899371098993803-3'-UTR,intron-Distal3.3908911.04124K562FAM120A
chr79899386098993900-3'-UTR,intron-Distal3.3031414.04327K562UPF1
chr79899792198997981-3'-UTR,CDS,intron-Distal,intron-Proximal3.299915.40162K562TRA2A
chr79899792598997972-3'-UTR,CDS,intron-Distal,intron-Proximal3.2126914.55779K562ZNF622
chr79899368698993777-3'-UTR,intron-Distal3.338557.82337K562IGF2BP1
chr79899426198994316-3'-UTR,CDS,intron-Distal3.1082019.08916K562PUM1
chr79899793998997970-3'-UTR,CDS,intron-Distal4.3023317.02268K562UCHL5
chr79899409898994130-3'-UTR,intron-Distal,intron-Proximal4.6110133.93141K562UCHL5
chr79899796898998048-3'-UTR,CDS,intron-Distal,intron-Proximal5.206434.72866HepG2FTO
chr79899380798993909-3'-UTR,intron-Distal3.233328.07678HepG2DDX55
chr79899390098993925-3'-UTR,intron-Distal3.018789.77734K562UPF1
chr79899264898992701-3'-UTR,intron-Distal4.795227.60539K562LIN28B
chr79899380398993927-3'-UTR,intron-Distal3.0227116.13049K562FAM120A
chr79899407398994133-3'-UTR,intron-Distal,intron-Proximal4.8645920.56041K562GRWD1
chr79899382098993889-3'-UTR,intron-Distal4.235788.39611HepG2GRWD1
chr79899792598997983-3'-UTR,CDS,intron-Distal,intron-Proximal3.4292424.91927K562PUM1
chr79899552798995587-3'-UTR,CDS,intron-Distal,intron-Proximal3.602984.25269HepG2ZNF800
chr79899801198998044-3'-UTR,CDS,intron-Distal3.206345.44101K562UPF1
chr79899407498994138-3'-UTR,intron-Distal,intron-Proximal3.669118.51590HepG2GRWD1
chr79899792498997939-3'-UTR,CDS,intron-Distal,intron-Proximal4.2761015.79006K562UCHL5
chr79899387198993902-3'-UTR,intron-Distal4.0097817.26260K562DDX55
chr79899372898993786-3'-UTR,intron-Distal3.382023.75562K562PCBP1
chr79899798998998048-3'-UTR,CDS,intron-Distal,intron-Proximal3.448894.31749K562TRA2A
chr79899405798994098-3'-UTR,intron-Distal,intron-Proximal4.4376831.46988K562UCHL5
chr79899406298994128-3'-UTR,intron-Distal,intron-Proximal3.384398.51939K562APOBEC3C
chr79899548598995534-3'-UTR,CDS,intron-Distal4.0708019.61409K562UCHL5
chr79899407098994125-3'-UTR,intron-Distal,intron-Proximal4.8561016.19302K562PABPC4
chr79899383998993856-3'-UTR,intron-Distal4.7737816.45220K562PABPC4
chr79899372898993772-3'-UTR,intron-Distal3.185926.74069K562PABPC4
chr79899406498994123-3'-UTR,intron-Distal,intron-Proximal4.0263927.69969K562UPF1
chr79899798198998048-3'-UTR,CDS,intron-Distal,intron-Proximal4.2603410.72476HepG2GRWD1
chr79899392598994023-3'-UTR,intron-Distal3.7522920.78144K562UPF1
chr79899392398993954-3'-UTR,intron-Distal3.3849812.34533K562UCHL5
chr79899546798995488-3'-UTR,CDS,intron-Distal,intron-Proximal3.450557.29769HepG2PRPF8
chr79899408098994152-3'-UTR,intron-Distal,intron-Proximal4.200343.34655HepG2AKAP1
chr79899392398993999-3'-UTR,intron-Distal4.5822720.94292HepG2UPF1
chr79899408798994119-3'-UTR,intron-Distal,intron-Proximal3.896376.23998K562PUM1
chr79899390398993923-3'-UTR,intron-Distal3.541315.34614K562PABPC4
chr79899549598995602-3'-UTR,CDS,intron-Distal,intron-Proximal3.2511235.41020K562PUM1
chr79899549698995580-3'-UTR,CDS,intron-Distal3.8460920.53066K562ZNF622
chr79899433398994364-3'-UTR,CDS,intron-Distal3.1767313.66922K562ZNF800
chr79899385598993924-3'-UTR,intron-Distal3.321285.39571HepG2LARP4
chr79899798498998040-3'-UTR,CDS,intron-Distal3.9220535.48329K562UCHL5
chr79899798498998047-3'-UTR,CDS,intron-Distal3.230924.79538HepG2BCLAF1
chr79899550098995526-3'-UTR,CDS,intron-Distal3.3127619.88992K562ZNF800
chr79899407698994125-3'-UTR,intron-Distal,intron-Proximal4.4717517.86318K562DDX55
chr79899553498995578-3'-UTR,CDS,intron-Distal4.5461120.72459K562UCHL5
chr79899793398997955-3'-UTR,CDS,intron-Distal4.155233.31335K562MTPAP
chr79899390298993930-3'-UTR,intron-Distal3.3918117.40363K562DDX55
chr79899392698993997-3'-UTR,intron-Distal3.212446.55799HepG2PABPN1
chr79899792398997970-3'-UTR,CDS,intron-Distal,intron-Proximal4.164747.27605HepG2GRWD1
chr79899380798993857-3'-UTR,intron-Distal3.101273.57062K562IGF2BP1
chr79899377298993839-3'-UTR,intron-Distal4.0720815.14605K562PABPC4
chr79899406298994137-3'-UTR,intron-Distal,intron-Proximal3.0926222.79512K562DDX6
chr79899405898994134-3'-UTR,intron-Distal,intron-Proximal3.8161327.49289K562FAM120A
chr79899406798994135-3'-UTR,intron-Distal,intron-Proximal3.8143231.34166K562GTF2F1
chr79899387698993903-3'-UTR,intron-Distal4.5712833.43327K562PABPC4
chr79899407298994089-3'-UTR,intron-Distal,intron-Proximal4.1589613.09306K562ZNF622
chr79899428098994334-3'-UTR,CDS,intron-Distal3.5511115.37828K562UCHL5
chr79899393098993995-3'-UTR,intron-Distal3.1123312.87923K562DDX55
chr79899797398998048-3'-UTR,CDS,intron-Distal,intron-Proximal3.295515.56943HepG2ZNF800
chr79899380298993923-3'-UTR,intron-Distal4.9638121.66259HepG2UPF1
chr79899792498997980-3'-UTR,CDS,intron-Distal,intron-Proximal3.0453315.06128K562GRWD1
chr79899369698993795-3'-UTR,intron-Distal4.0530419.37461K562UPF1
chr79899407698994134-3'-UTR,intron-Distal,intron-Proximal3.858485.87389HepG2UPF1
chr79900109899001161-5'-UTR,CDS,intron-Distal,intron-Proximal3.098665.12804K562GPKOW
chr79900102099001094-5'-UTR,CDS,intron-Distal,intron-Proximal3.3012622.26648K562ZNF622
chr79900109599001197-5'-UTR,CDS,intron-Distal,intron-Proximal3.617717.68851HepG2AQR
chr79900111099001129-5'-UTR,CDS,intron-Distal,intron-Proximal4.8964212.34367K562UCHL5
chr79900613099006220-5'-UTR,CDS,intron-Distal,intron-Proximal3.532446.65702HepG2NCBP2
chr79900616599006214-5'-UTR,CDS,intron-Distal,intron-Proximal3.354435.33987HepG2GRWD1
chr79900102099001071-5'-UTR,CDS,intron-Distal,intron-Proximal5.5753610.62302HepG2GRWD1
chr79900615999006199-5'-UTR,CDS,intron-Distal3.0461311.44762K562UCHL5
chr79900101899001059-5'-UTR,CDS,intron-Distal,intron-Proximal3.277309.91765K562DDX24
chr79900615899006226-5'-UTR,CDS,intron-Distal,intron-Proximal4.7945720.35055K562DDX3X
chr79900101799001077-5'-UTR,CDS,intron-Distal,intron-Proximal3.204305.79905HepG2BCLAF1
chr79900615999006198-5'-UTR,CDS,intron-Distal3.625496.05689K562GEMIN5
chr79900102899001137-5'-UTR,CDS,intron-Distal,intron-Proximal4.677666.73315K562TRA2A
chr79900101999001103-5'-UTR,CDS,intron-Distal,intron-Proximal4.0635436.99272K562UCHL5
chr79900606599006162-CDS,intron-Distal4.065465.93840HepG2PRPF8
chr79900248699002537-CDS,intron-Distal5.2777010.39778HepG2GRWD1
chr79900243399002535-CDS,intron-Distal,intron-Proximal3.179066.41150HepG2PRPF8
chr79900244699002538-CDS,intron-Distal,intron-Proximal3.6339910.08070HepG2AQR
chr79900250199002569-CDS,intron-Distal,intron-Proximal3.6171422.45797K562ZNF622
chr79900242699002589-CDS,intron-Distal,intron-Proximal3.137088.26398HepG2BUD13
chr79900245099002494-CDS,intron-Distal,intron-Proximal3.9551122.86236K562AQR
chr79900249699002578-CDS,intron-Distal,intron-Proximal3.3812612.33887K562DDX3X
chr79900255499002573-CDS,intron-Distal,intron-Proximal4.1835811.27765K562UCHL5
chr79900248599002554-CDS,intron-Distal4.7176333.66418K562UCHL5
chr79899812998998178-intron-Distal,intron-Proximal3.347643.01707K562SLTM
chr79899543598995446-intron-Distal,intron-Proximal5.464544.86944K562AQR
chr79899544698995452-intron-Distal,intron-Proximal5.7860918.01578K562AQR
chr79900151699001573-intron-Distal4.997353.92230K562EFTUD2
chr79900170299001800-intron-Distal3.6418511.26262HepG2RBFOX2
chr79900151199001573-intron-Distal3.127243.13706K562TAF15
chr79900152999001590-intron-Distal4.0663111.58353K562AQR
chr79900233299002387-intron-Distal,intron-Proximal3.389238.62453HepG2RBFOX2
chr79900149699001600-intron-Distal3.306794.30514K562FUS
chr79899694198997010-intron-Distal3.686936.02668HepG2SUGP2
chr79900134099001407-intron-Distal3.859677.71340K562RBFOX2
chr79900225899002288-intron-Distal3.615595.41630K562RBFOX2
chr79900611699006158-intron-Distal3.895794.00320K562AQR
chr79900149099001527-intron-Distal6.5338424.48587K562RBFOX2
chr79900243199002450-intron-Distal,intron-Proximal5.9026323.84012K562AQR
chr79899545298995478-intron-Distal,intron-Proximal5.7755217.48131K562AQR
chr79899719198997224-intron-Distal3.391473.13705K562BUD13
chr79900244299002464-intron-Distal,intron-Proximal3.784414.77019K562BUD13
chr79899547898995484-intron-Distal,intron-Proximal5.0301614.93855K562AQR
chr79899543598995467-intron-Distal,intron-Proximal3.861427.87148HepG2PRPF8
chr79899732998997371-intron-Distal5.002796.54449K562RBM15
chr79900136599001381-intron-Distal4.672064.86944K562AQR
chr79900264599002701-intron-Distal,intron-Proximal3.730873.17740K562CSTF2T
chr79900151899001607-intron-Distal3.298594.26200K562GTF2F1
chr79900144199001517-intron-Distal4.353476.59266K562DROSHA
chr79900238099002431-intron-Distal,intron-Proximal4.592937.53589K562AQR
chr79900154099001571-intron-Distal4.198465.42720K562UCHL5
chr79900150899001579-intron-Distal4.467427.34343K562DDX6
chr79900151099001618-intron-Distal5.3648429.43167HepG2RBFOX2
chr79900145299001510-intron-Distal4.1285315.82093HepG2RBFOX2
chr79900140799001490-intron-Distal5.0950021.47183K562RBFOX2
chr79899592298996014-intron-Distal4.646784.47026K562MATR3
chr79899672098996785-intron-Distal4.140373.62737K562HNRNPK
chr79900134199001415-intron-Distal4.283567.68118HepG2RBFOX2
chr79900153499001625-intron-Distal3.241924.35063HepG2PRPF4
chr79900161899001669-intron-Distal4.035616.81262HepG2RBFOX2
chr79900152799001591-intron-Distal6.5001122.65484K562RBFOX2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PDAP1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PDAP1 is not available on ENCORE database.

  • 94 RBPs can affect the levels of PDAP1.  








The Knockdown/knockout RNA-Seq assay for PDAP1 is not available on ENCORE database.





94 RBPs can affect the gene expression of PDAP1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PDAP1ENSG00000106244.8696.117001059.66240-0.606206.498904.92540HepG2AATF
PDAP1ENSG00000106244.82893.659301474.066300.9730013.4948012.41220HepG2AKAP1
PDAP1ENSG00000106244.81776.764601219.614100.542705.205304.14550HepG2ASCC1
PDAP1ENSG00000106244.81829.174902099.56280-0.198902.085001.47330HepG2AUH
PDAP1ENSG00000106244.81728.395101207.334900.517503.520202.46540HepG2BCCIP
PDAP1ENSG00000106244.81124.177402132.17190-0.9235017.0252015.72290HepG2BOP1
PDAP1ENSG00000106244.81185.519701521.77310-0.360202.929701.66400HepG2BUD13
PDAP1ENSG00000106244.81803.735801158.734200.638307.203106.00080HepG2CIRBP
PDAP1ENSG00000106244.81634.12110962.524400.763505.530304.44470HepG2CNOT7
PDAP1ENSG00000106244.81924.110701411.932400.446403.637102.93050HepG2DDX3X
PDAP1ENSG00000106244.81845.028801213.142000.604805.427004.58790HepG2DDX6
PDAP1ENSG00000106244.81565.531701165.962000.425003.240002.60080HepG2EIF2S1
PDAP1ENSG00000106244.81848.463201288.398800.520604.155503.37670HepG2EIF4A3
PDAP1ENSG00000106244.81726.312001254.678000.460302.773902.08450HepG2EIF4B
PDAP1ENSG00000106244.81595.648101955.69630-0.293502.743401.90950HepG2EIF4G1
PDAP1ENSG00000106244.82849.327402410.623700.241103.108302.47700HepG2ETF1
PDAP1ENSG00000106244.81315.74990886.950200.568906.533105.35310HepG2FUBP3
PDAP1ENSG00000106244.82239.478501300.322300.7842010.530709.26600HepG2FXR1
PDAP1ENSG00000106244.81789.759901206.038700.569405.256404.35270HepG2G3BP1
PDAP1ENSG00000106244.81739.697802218.90000-0.351002.140201.57340HepG2GPKOW
PDAP1ENSG00000106244.81084.494201346.04320-0.311703.707102.58800HepG2HDGF
PDAP1ENSG00000106244.81340.826301821.72050-0.442206.714605.36840HepG2HNRNPA2B1
PDAP1ENSG00000106244.81540.496701887.31040-0.292903.630602.81810HepG2HNRNPF
PDAP1ENSG00000106244.81673.682501221.692500.454004.211503.36530HepG2HNRNPK
PDAP1ENSG00000106244.81269.942601081.873100.231102.284201.72800HepG2HNRNPU
PDAP1ENSG00000106244.81456.041701858.46620-0.352103.594102.77740HepG2IGF2BP1
PDAP1ENSG00000106244.8857.057901225.84050-0.516304.314903.48810HepG2IGF2BP2
PDAP1ENSG00000106244.81338.432401105.092700.276302.579501.86970HepG2ILF2
PDAP1ENSG00000106244.81768.966401300.778000.443403.570302.82490HepG2MAGOH
PDAP1ENSG00000106244.82329.983101307.996200.8329010.299609.14460HepG2MATR3
PDAP1ENSG00000106244.81187.572601659.97980-0.483205.316604.22430HepG2MSI2
PDAP1ENSG00000106244.81827.972901338.756300.449303.591902.87430HepG2NCBP2
PDAP1ENSG00000106244.82294.266801965.418600.223102.311701.61490HepG2NOL12
PDAP1ENSG00000106244.81369.368601070.833300.354704.453103.40880HepG2PARN
PDAP1ENSG00000106244.81842.666901261.039300.5471010.786009.71420HepG2PCBP1
PDAP1ENSG00000106244.81058.55520820.231500.367903.307101.95670HepG2PKM
PDAP1ENSG00000106244.81525.723601283.265200.249602.224201.72340HepG2PTBP1
PDAP1ENSG00000106244.81190.210301876.25340-0.656608.345807.38480HepG2PUF60
PDAP1ENSG00000106244.81671.256301991.83030-0.253202.795002.19990HepG2PUM1
PDAP1ENSG00000106244.81168.161302014.82600-0.7864018.6484017.54620HepG2RBM22
PDAP1ENSG00000106244.81803.127101428.059100.336304.008403.37910HepG2NELFE
PDAP1ENSG00000106244.81446.470602033.03290-0.491105.398904.48820HepG2RPLP0
PDAP1ENSG00000106244.81307.11270965.181700.437404.057303.32740HepG2RPS19
PDAP1ENSG00000106244.81271.28010963.439000.399904.654603.85510HepG2SAFB2
PDAP1ENSG00000106244.81440.991801123.504200.359005.766904.89210HepG2SMN1
PDAP1ENSG00000106244.81610.088601167.454200.463702.943201.95380HepG2SMNDC1
PDAP1ENSG00000106244.8868.523302275.65540-1.3896069.6491068.00350HepG2SRFBP1
PDAP1ENSG00000106244.81346.671701854.20560-0.461408.056506.97120HepG2SRSF7
PDAP1ENSG00000106244.81525.054301134.500900.426706.018305.26080HepG2SRSF9
PDAP1ENSG00000106244.81231.562301975.77890-0.6819018.0013016.93590HepG2SSB
PDAP1ENSG00000106244.82568.462802106.868700.285705.426004.60820HepG2SUCLG1
PDAP1ENSG00000106244.8856.895801181.66800-0.463603.618302.86030HepG2SUPV3L1
PDAP1ENSG00000106244.81553.021801253.579600.308903.142902.55020HepG2TAF15
PDAP1ENSG00000106244.81474.818802063.98580-0.484905.172904.22620HepG2TARDBP
PDAP1ENSG00000106244.81042.21060791.974900.396002.247501.34070HepG2TFIP11
PDAP1ENSG00000106244.81319.489101060.646100.314903.765803.13000HepG2TRIM56
PDAP1ENSG00000106244.82173.257501833.190800.245402.271801.48550HepG2TUFM
PDAP1ENSG00000106244.81027.728701754.38830-0.7715010.001208.79200HepG2U2AF1
PDAP1ENSG00000106244.81520.622801940.51590-0.351802.069801.35180HepG2UBE2L3
PDAP1ENSG00000106244.8951.41710697.985100.446802.960102.17780HepG2UCHL5
PDAP1ENSG00000106244.81877.882301552.690900.274203.544502.88250HepG2UTP3
PDAP1ENSG00000106244.81496.891301163.225300.363702.109201.46820HepG2XRN2
PDAP1ENSG00000106244.81177.441901379.64430-0.228602.482201.84050HepG2ZC3H8
PDAP1ENSG00000106244.82096.323601768.753200.245003.707903.09980HepG2ZNF622
PDAP1ENSG00000106244.85947.144205171.072300.201602.999802.41200K562AGGF1
PDAP1ENSG00000106244.82716.531105471.35590-1.0101023.2638021.74740K562AQR
PDAP1ENSG00000106244.82069.834904357.12410-1.073903.919702.87950K562BOP1
PDAP1ENSG00000106244.82340.200303908.45380-0.740007.631605.24450K562BUD13
PDAP1ENSG00000106244.85243.488806078.87850-0.213302.712301.61610K562CPEB4
PDAP1ENSG00000106244.82646.877504633.33880-0.807802.732601.95470K562CPSF6
PDAP1ENSG00000106244.87075.838008736.79630-0.304203.152202.11310K562CELF1
PDAP1ENSG00000106244.83542.107404341.01590-0.293404.410502.85790K562DDX21
PDAP1ENSG00000106244.82838.283902355.507100.268902.783101.98460K562EIF3G
PDAP1ENSG00000106244.86160.871207104.80580-0.205702.784501.84370K562EIF4G2
PDAP1ENSG00000106244.83086.162204288.59860-0.474703.588101.69180K562ESF1
PDAP1ENSG00000106244.81824.679202537.12520-0.475604.411102.92770K562FKBP4
PDAP1ENSG00000106244.82695.315104713.41070-0.806302.668701.82940K562FMR1
PDAP1ENSG00000106244.83839.815602546.292800.5925015.1019013.79990K562FXR1
PDAP1ENSG00000106244.8827.202201801.17680-1.1226014.3599012.46750K562G3BP2
PDAP1ENSG00000106244.83923.004904790.73380-0.288303.928602.57390K562GLRX3
PDAP1ENSG00000106244.82777.649504424.07080-0.671502.153901.45070K562GPKOW
PDAP1ENSG00000106244.82104.539702923.12780-0.474006.354605.48580K562HNRNPC
PDAP1ENSG00000106244.84636.458703317.540400.482804.301703.12580K562HNRNPM
PDAP1ENSG00000106244.82274.975303776.62810-0.731202.313001.46790K562KRR1
PDAP1ENSG00000106244.83713.085902915.201300.348902.919302.05520K562MAGOH
PDAP1ENSG00000106244.83486.036402909.060900.260902.428301.57080K562MATR3
PDAP1ENSG00000106244.86154.511307572.86880-0.299202.837101.69070K562MSI2
PDAP1ENSG00000106244.83992.680305036.81580-0.335207.218005.96390K562MTPAP
PDAP1ENSG00000106244.84218.084405596.44470-0.4079016.6796015.05690K562NSUN2
PDAP1ENSG00000106244.83925.682904931.67540-0.329102.469001.68470K562PCBP3
PDAP1ENSG00000106244.83134.886303782.70950-0.271002.753001.95380K562POLR2G
PDAP1ENSG00000106244.83922.393302832.411900.469607.006205.98670K562PTBP1
PDAP1ENSG00000106244.86619.421508246.05720-0.317004.786003.35230K562PUM1
PDAP1ENSG00000106244.86566.652708078.64220-0.299005.295503.94720K562PUM2
PDAP1ENSG00000106244.82483.396201976.687000.329102.474701.53380K562RPS3
PDAP1ENSG00000106244.83578.278805522.12880-0.6260018.4022016.45010K562SF3A3
PDAP1ENSG00000106244.84893.111305657.52810-0.209403.895502.80300K562SRPK2
PDAP1ENSG00000106244.82376.538901908.110300.316603.032601.91800K562SRSF4
PDAP1ENSG00000106244.81858.899802504.03090-0.429803.493502.33710K562SUPV3L1
PDAP1ENSG00000106244.84563.789303794.230400.266302.888302.04880K562SYNCRIP
PDAP1ENSG00000106244.83411.980502810.018700.279902.133501.50750K562TARDBP
PDAP1ENSG00000106244.83374.460902710.674900.315903.426902.50080K562TIA1
PDAP1ENSG00000106244.81124.629101746.07700-0.634705.054103.48700K562U2AF1
PDAP1ENSG00000106244.8981.929001803.26800-0.8769018.8565016.70000K562U2AF2
PDAP1ENSG00000106244.84432.267705934.02190-0.4210011.249909.92130K562UPF1
PDAP1ENSG00000106244.84010.854505360.34320-0.418403.643202.25640K562UTP3
PDAP1ENSG00000106244.83620.626905077.56680-0.487907.662906.16520K562WDR3
PDAP1ENSG00000106244.84616.486106163.75540-0.417005.167703.92890K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PDAP1 is not available on ENCORE database.





5 RBPs can affect the splicing of PDAP1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSPDAP1ENSG00000106244.8chr7-9900102099001206990010209900112899002484990025760.061000.000000.00000longerK562AQR
A3SSPDAP1ENSG00000106244.8chr7-9900102099001148990010209900112899002484990025760.062000.000050.00417longerK562U2AF1
MXEPDAP1ENSG00000106244.8chr7-98997925989980479900248499002576989954849899563699006158990064520.090000.000210.010031includedK562EFTUD2
MXEPDAP1ENSG00000106244.8chr7-9900102099001148990024849900257698995484989956369900615899006213-0.057000.000430.010102includedK562SF3B4
MXEPDAP1ENSG00000106244.8chr7-98997925989980479900248499002576989954849899563699006158990064520.110000.000010.000461includedK562PRPF8

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PDAP1 is not avaliable on ENCORE database.