NXF1

General Information

Gene Name       : NXF1
Gene ID             : ENSG00000162231.13
Essential Gene : Yes

Functions

Localization(RBPImage: NXF1)

Domains (AlphaFold: NXF1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NXF1ENSG00000162231.1347.3157.7652.53ENCSR000AEF
HepG2NXF1ENSG00000162231.1370.1757.5763.87ENCSR985KAT
K562NXF1ENSG00000162231.1362.7566.1064.42ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
NXF1K562shRNABGKLV13-31,BGKLV13-32BGKLV13-1,BGKLV13-2no band,no bandNotSatisfiedENCODE3
NXF1K562shRNABGKLV25-37,BGKLV25-38BGKLV25-1,BGKLV25-2redo transduction,redo transductionNotSatisfiedENCODE3
NXF1HepG2shRNABGHLV23-27,BGHLV23-28BGHLV23-1,BGHLV23-2redo transfection,redo transfectionNotSatisfiedENCODE3
NXF1K562CRISPRBGKcLV46-49,BGKcLV46-50BGKcLV46-1,BGKcLV46-268.2,68.8ExperimentedENCORE2
NXF1K562CRISPRBGKcLV46-51,BGKcLV46-52BGKcLV46-1,BGKcLV46-219.5,-0.8ExperimentedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  
    NXF1: Click to RBP Image Database
  • Nuclei
  • Nucleoplasm
  • Cytoplasm
  • Cytosolic












    • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








    RNA Targets

    • eCLIP assay for NXF1 is not avaliable on ENCORE database.



    Proteins bound to RNA
    • NXF1 RNA is bound by 28 proteins.  







    eCLIP assay for NXF1 is not avaliable on ENCORE database.





    28 proteins are bound to NXF1 RNA:

    Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
    chr116256761362567654-3'-UTR,5'-UTR,intron-Distal5.5683328.68274K562PTBP1
    chr116256172862561771-3'-UTR,CDS,intron-Distal,intron-Proximal3.715894.13746HepG2PPIG
    chr116256401662564090-3'-UTR,CDS,intron-Distal,intron-Proximal3.887916.67591K562SF3B4
    chr116257100762571020-3'-UTR,CDS,intron-Distal,intron-Proximal4.5621211.92592K562U2AF2
    chr116256241062562460-3'-UTR,CDS,intron-Distal4.102676.64430HepG2PPIG
    chr116256777562567915-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.161953.30948HepG2PRPF4
    chr116256778362567846-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.347438.38944K562PRPF8
    chr116256775062567879-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.2057415.99835HepG2PPIG
    chr116256398762564039-3'-UTR,CDS,intron-Distal,intron-Proximal3.503064.71371HepG2GRWD1
    chr116256465462564706-3'-UTR,CDS,intron-Distal,intron-Proximal5.492519.44903HepG2PPIG
    chr116256173362561791-3'-UTR,CDS,intron-Distal,intron-Proximal3.080923.90015HepG2PABPN1
    chr116256759162567613-3'-UTR,5'-UTR,intron-Distal7.3403988.50129K562PTBP1
    chr116256398262564051-3'-UTR,CDS,intron-Distal,intron-Proximal4.080783.87732K562U2AF1
    chr116256967462569746-3'-UTR,CDS,intron-Distal,intron-Proximal3.864694.66077K562U2AF2
    chr116256774462567782-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.238934.65237HepG2U2AF2
    chr116256764662567694-3'-UTR,5'-UTR,intron-Distal3.977366.35873K562PRPF8
    chr116256755262567591-3'-UTR,5'-UTR,intron-Distal,intron-Proximal7.2661584.31066K562PTBP1
    chr116256243162562480-3'-UTR,CDS,intron-Distal,intron-Proximal3.264543.97821HepG2PABPN1
    chr116256190962561922-3'-UTR,CDS,intron-Distal,intron-Proximal4.252913.12843K562PRPF8
    chr116257094762571046-3'-UTR,CDS,intron-Distal,intron-Proximal3.524107.66871HepG2BCLAF1
    chr116255996062560038-3'-UTR,CDS,intron-Distal,intron-Proximal4.078168.90178K562SF3B4
    chr116255982362559909-3'-UTR,intron-Distal,intron-Proximal3.040376.59867HepG2DDX55
    chr116256776862567796-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.527313.52230K562AQR
    chr116256967062569724-3'-UTR,CDS,intron-Distal4.428505.79396K562DDX24
    chr116256189162561934-3'-UTR,CDS,intron-Distal,intron-Proximal4.248069.29543K562AQR
    chr116257102062571055-3'-UTR,CDS,intron-Distal,intron-Proximal4.2034612.29518K562U2AF2
    chr116257099262571044-3'-UTR,CDS,intron-Distal,intron-Proximal3.978934.80912HepG2PPIG
    chr116256755762567650-3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.2914043.03884HepG2PTBP1
    chr116257101562571039-3'-UTR,CDS,intron-Distal,intron-Proximal4.870764.17466K562DDX24
    chr116256465462564695-3'-UTR,CDS,intron-Distal,intron-Proximal3.533783.57857HepG2BCLAF1
    chr116257093562571039-3'-UTR,CDS,intron-Distal,intron-Proximal4.252674.15726HepG2G3BP1
    chr116256761362567637-3'-UTR,5'-UTR,intron-Distal3.738343.88924K562PRPF8
    chr116257100462571043-3'-UTR,CDS,intron-Distal,intron-Proximal4.366974.42734K562UCHL5
    chr116256754562567613-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.646918.70141K562PRPF8
    chr116256944962569502-3'-UTR,CDS,intron-Distal,intron-Proximal4.070587.14937K562ZNF622
    chr116256337162563416-3'-UTR,CDS,intron-Distal,intron-Proximal3.933053.33617HepG2PABPN1
    chr116256466862564723-3'-UTR,CDS,intron-Distal,intron-Proximal3.915854.75435K562EFTUD2
    chr116255967162559784-3'-UTR,intron-Distal,intron-Proximal3.578794.80676K562RBM15
    chr116256765462567688-3'-UTR,5'-UTR,intron-Distal5.2188511.52400K562PTBP1
    chr116255985062559949-3'-UTR,intron-Distal,intron-Proximal5.8803626.60356K562PUM2
    chr116256607462566205-5'-UTR,intron-Distal,intron-Proximal4.5244710.01583HepG2GTF2F1
    chr116256649262566565-5'-UTR,intron-Distal4.953444.31720HepG2MATR3
    chr116256647662566534-5'-UTR,intron-Distal3.047925.09972HepG2U2AF1
    chr116256673062566757-5'-UTR,intron-Distal3.737115.47669K562PTBP1
    chr116256628362566350-5'-UTR,intron-Distal,intron-Proximal4.2857711.89941K562U2AF1
    chr116257283462572883-5'-UTR,intron-Distal4.705773.81597K562RBM15
    chr116257136662571426-5'-UTR,CDS,intron-Distal,intron-Proximal4.872826.37937HepG2BCLAF1
    chr116257126162571329-5'-UTR,CDS,intron-Distal,intron-Proximal3.328426.73967K562ZNF622
    chr116256656862566581-5'-UTR,intron-Distal4.7567810.89104HepG2PTBP1
    chr116256617962566224-5'-UTR,intron-Distal,intron-Proximal4.956829.69740K562U2AF2
    chr116256604162566091-5'-UTR,CDS,intron-Distal,intron-Proximal4.7327811.57554HepG2SF3A3
    chr116256611662566179-5'-UTR,intron-Distal,intron-Proximal4.7596413.64994K562U2AF2
    chr116256654962566568-5'-UTR,intron-Distal6.5263724.22169HepG2PTBP1
    chr116256646562566555-5'-UTR,intron-Distal3.6497010.87703HepG2PCBP2
    chr116256663262566692-5'-UTR,intron-Distal6.8734718.22263K562PTBP1
    chr116256654862566570-5'-UTR,intron-Distal4.7494412.63672K562PTBP1
    chr116257261762572698-5'-UTR,intron-Distal,intron-Proximal4.6765811.74118K562EFTUD2
    chr116257126162571366-5'-UTR,CDS,intron-Distal,intron-Proximal3.5518710.92438HepG2BCLAF1
    chr116256649162566548-5'-UTR,intron-Distal4.9631550.53377K562PTBP1
    chr116256657662566632-5'-UTR,intron-Distal5.7279839.29054K562PTBP1
    chr116257283962572906-5'-UTR,intron-Distal,intron-Proximal3.429045.18770HepG2NCBP2
    chr116256617262566224-5'-UTR,intron-Distal,intron-Proximal3.243205.18801K562U2AF1
    chr116256649062566565-5'-UTR,intron-Distal3.970177.27718K562MATR3
    chr116257283462572893-5'-UTR,intron-Distal3.678716.59200K562DDX3X
    chr116256609162566110-5'-UTR,intron-Distal,intron-Proximal4.834493.26592HepG2SF3A3
    chr116256646962566558-5'-UTR,intron-Distal3.0038414.33494HepG2U2AF2
    chr116257126262571330-5'-UTR,CDS,intron-Distal,intron-Proximal3.590779.99012HepG2PPIG
    chr116256627762566360-5'-UTR,intron-Distal,intron-Proximal3.222759.87582K562U2AF2
    chr116256628862566341-5'-UTR,intron-Distal,intron-Proximal3.100166.04421HepG2U2AF2
    chr116257136562571421-5'-UTR,CDS,intron-Distal,intron-Proximal4.347417.49899HepG2PPIG
    chr116256647562566548-5'-UTR,intron-Distal3.3678810.35164K562U2AF2
    chr116256629662566352-5'-UTR,intron-Distal,intron-Proximal4.075533.00258HepG2RBM5
    chr116256656562566692-5'-UTR,intron-Distal3.220737.20608K562MATR3
    chr116256610662566172-5'-UTR,intron-Distal,intron-Proximal4.8809615.60300K562PTBP1
    chr116256604962566102-5'-UTR,intron-Distal,intron-Proximal3.308213.59805HepG2SF3B4
    chr116256609662566207-5'-UTR,intron-Distal,intron-Proximal3.353457.08861HepG2U2AF1
    chr116256658162566686-5'-UTR,intron-Distal5.2981454.63145HepG2PTBP1
    chr116256617262566223-5'-UTR,intron-Distal,intron-Proximal3.379354.35431HepG2PRPF4
    chr116257258662572699-5'-UTR,intron-Distal,intron-Proximal5.967839.61799HepG2EFTUD2
    chr116256628662566346-5'-UTR,intron-Distal,intron-Proximal3.170045.93810HepG2PTBP1
    chr116257131162571387-5'-UTR,CDS,intron-Distal,intron-Proximal4.235466.40330K562UCHL5
    chr116256627362566341-5'-UTR,intron-Distal,intron-Proximal3.485446.79343HepG2PCBP2
    chr116256647762566549-5'-UTR,intron-Distal5.3478440.86322HepG2PTBP1
    chr116257126262571341-5'-UTR,CDS,intron-Distal,intron-Proximal5.059258.66757K562DDX24
    chr116257125962571311-5'-UTR,CDS,intron-Distal,intron-Proximal3.650497.52358K562UCHL5
    chr116256792562567964-CDS,intron-Distal,intron-Proximal3.223463.78727K562PRPF8
    chr116256782562567892-CDS,intron-Distal,intron-Proximal3.384156.24463HepG2GRWD1
    chr116256783962567848-CDS,intron-Distal,intron-Proximal3.259228.52456K562AQR
    chr116256789262567959-CDS,intron-Distal,intron-Proximal4.834217.83063HepG2GRWD1
    chr116256861662568673-CDS,intron-Distal4.1927511.30590HepG2PPIG
    chr116256779662567839-CDS,intron-Distal,intron-Proximal3.6767312.26379K562AQR
    chr116256856562568616-CDS,intron-Distal,intron-Proximal3.335937.09278HepG2PPIG
    chr116256921862569324-CDS,intron-Distal,intron-Proximal3.015078.76513K562BUD13
    chr116256787962567958-CDS,intron-Distal5.3346419.59212HepG2PPIG
    chr116256887162568921-CDS,intron-Distal,intron-Proximal3.559496.21987K562AQR
    chr116256790562567956-CDS,intron-Distal3.920635.96588K562ZNF622
    chr116256780362567869-CDS,intron-Distal,intron-Proximal3.4381016.93877HepG2PRPF8
    chr116256884862568917-CDS,intron-Distal,intron-Proximal3.192206.21720K562BUD13
    chr116256879762568873-CDS,intron-Distal,intron-Proximal3.263377.98451K562DDX24
    chr116256887562568946-CDS,intron-Distal,intron-Proximal3.501505.67192K562SF3B4
    chr116256880062568853-CDS,intron-Distal,intron-Proximal3.573818.57574HepG2PPIG
    chr116256879962568837-CDS,intron-Distal,intron-Proximal3.154904.00731K562UCHL5
    chr116256927962569323-CDS,intron-Distal,intron-Proximal3.603315.83621K562AQR
    chr116256231162562344-intron-Distal,intron-Proximal4.764279.04436K562AQR
    chr116256848562568531-intron-Distal,intron-Proximal4.715915.50285K562PRPF8
    chr116257269862572769-intron-Distal,intron-Proximal4.922507.03763K562EFTUD2
    chr116256237162562407-intron-Distal,intron-Proximal4.6330324.55500K562AQR
    chr116256367162563724-intron-Distal,intron-Proximal5.621317.23906K562EFTUD2
    chr116257278562572801-intron-Distal,intron-Proximal4.812113.70761K562AQR
    chr116256235862562371-intron-Distal,intron-Proximal5.1506720.81366K562AQR
    chr116257271462572773-intron-Distal,intron-Proximal3.573444.31340HepG2RBM22
    chr116257275362572785-intron-Distal,intron-Proximal4.206365.26367K562AQR
    chr116257270162572779-intron-Distal,intron-Proximal6.2413310.35592HepG2EFTUD2
    chr116256961662569638-intron-Distal,intron-Proximal4.127143.85435K562PRPF8
    chr116256867362568757-intron-Distal,intron-Proximal4.509588.09130K562EFTUD2
    ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




    eCLIP assay for NXF1 is not avaliable on ENCORE database.



    Diffrential Expression

    • The Knockdown/knockout assay for NXF1 is not available on ENCORE database.

    • 122 RBPs can affect the levels of NXF1.  








    The Knockdown/knockout RNA-Seq assay for NXF1 is not available on ENCORE database.





    122 RBPs can affect the gene expression of NXF1 :

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    NXF1ENSG00000162231.92575.075201969.239000.386903.065402.07280HepG2ABCF1
    NXF1ENSG00000162231.91870.757401479.607600.338305.330504.54070HepG2ACO1
    NXF1ENSG00000162231.91854.606801257.266800.560706.135904.72690HepG2ADAR
    NXF1ENSG00000162231.91311.982701916.85640-0.547005.080603.68280HepG2AKAP8
    NXF1ENSG00000162231.91788.459402081.15950-0.218702.374201.72970HepG2AUH
    NXF1ENSG00000162231.92529.956501695.354800.577407.793206.85140HepG2BOP1
    NXF1ENSG00000162231.91280.147201540.04150-0.266702.241201.54210HepG2CALR
    NXF1ENSG00000162231.91716.457901103.512000.637203.768901.51610HepG2CDC40
    NXF1ENSG00000162231.91497.662201069.109700.486204.274103.32670HepG2CIRBP
    NXF1ENSG00000162231.91174.964201556.45190-0.405603.290502.54720HepG2CPSF6
    NXF1ENSG00000162231.91104.12100860.198700.360102.465801.44740HepG2CSTF2
    NXF1ENSG00000162231.92325.169402014.104400.207102.297201.70220HepG2CELF1
    NXF1ENSG00000162231.91651.441702165.41800-0.390907.526706.39120HepG2DAZAP1
    NXF1ENSG00000162231.91679.425801246.315100.430204.829603.61060HepG2DDX24
    NXF1ENSG00000162231.91516.723901221.061600.312702.472301.54480HepG2DHX30
    NXF1ENSG00000162231.91920.170501415.571900.439707.477106.46480HepG2DKC1
    NXF1ENSG00000162231.9923.401301266.00450-0.455305.931604.93380HepG2DNAJC21
    NXF1ENSG00000162231.91089.037401254.83050-0.204402.034801.45900HepG2DNAJC2
    NXF1ENSG00000162231.91862.984101493.790600.318502.998601.77450HepG2EIF2S2
    NXF1ENSG00000162231.91611.922801202.635800.422504.730803.36170HepG2EIF3G
    NXF1ENSG00000162231.91521.365701188.852300.355702.263601.68320HepG2EIF4A3
    NXF1ENSG00000162231.92076.936001157.608400.843208.123406.97510HepG2EIF4B
    NXF1ENSG00000162231.93457.922002389.525500.5331013.1478011.99740HepG2ETF1
    NXF1ENSG00000162231.92374.358601559.070100.606802.373101.43860HepG2FTO
    NXF1ENSG00000162231.91283.82700870.219300.560906.403405.23740HepG2FUBP3
    NXF1ENSG00000162231.91506.737201199.650900.328702.179501.56200HepG2FXR1
    NXF1ENSG00000162231.92261.684501112.773901.0231015.7506014.22190HepG2G3BP1
    NXF1ENSG00000162231.92164.685601181.454300.8735013.1635011.23210HepG2G3BP2
    NXF1ENSG00000162231.91795.231801231.748400.543404.927503.56630HepG2GNB2L1
    NXF1ENSG00000162231.92266.431201764.424700.361102.607501.98370HepG2GPKOW
    NXF1ENSG00000162231.92653.199201652.661100.682805.468603.89940HepG2GRSF1
    NXF1ENSG00000162231.91597.460701990.19630-0.317104.005302.91410HepG2HNRNPA2B1
    NXF1ENSG00000162231.92053.470301126.967000.8655013.9851012.53610HepG2HNRNPK
    NXF1ENSG00000162231.91641.351301972.45770-0.265103.641502.87540HepG2HNRNPL
    NXF1ENSG00000162231.91632.590001131.082500.529404.902304.02650HepG2IGF2BP2
    NXF1ENSG00000162231.91236.428101442.60630-0.222502.618101.90270HepG2ILF2
    NXF1ENSG00000162231.91269.407201740.47070-0.455302.633201.35430HepG2ILF3
    NXF1ENSG00000162231.91220.559301700.76870-0.478603.408002.06010HepG2KHDRBS1
    NXF1ENSG00000162231.91560.846801137.727700.456102.915301.88160HepG2KHSRP
    NXF1ENSG00000162231.92791.801102004.694400.477703.582302.63620HepG2LARP4
    NXF1ENSG00000162231.91524.512901206.762800.337102.022801.47850HepG2MATR3
    NXF1ENSG00000162231.91644.220902147.23680-0.385104.737303.73990HepG2NOL12
    NXF1ENSG00000162231.92030.715301492.978500.443704.416303.47590HepG2NSUN2
    NXF1ENSG00000162231.91490.941401099.908300.438703.391702.59790HepG2PABPC4
    NXF1ENSG00000162231.91602.575701148.172800.481008.370907.40850HepG2PCBP1
    NXF1ENSG00000162231.92050.151001323.786400.631004.532303.22570HepG2PCBP2
    NXF1ENSG00000162231.92195.060101692.134700.375305.907104.82010HepG2PRPF4
    NXF1ENSG00000162231.91833.624502176.02170-0.247003.471302.82180HepG2PUM1
    NXF1ENSG00000162231.91291.741101937.74860-0.585109.599608.13560HepG2RBM15
    NXF1ENSG00000162231.92286.005201997.185300.194801.801501.36010HepG2RBM22
    NXF1ENSG00000162231.91478.790201148.343500.364803.444302.69820HepG2RBM25
    NXF1ENSG00000162231.92903.231501300.223401.1588049.6549048.02790HepG2NELFE
    NXF1ENSG00000162231.91660.168701211.023700.455007.520006.57640HepG2RECQL
    NXF1ENSG00000162231.91754.340601254.997300.483102.758001.81620HepG2RPS10
    NXF1ENSG00000162231.91302.526601035.288600.331202.708902.09900HepG2RPS19
    NXF1ENSG00000162231.91015.600801257.70490-0.308503.762303.03100HepG2SAFB2
    NXF1ENSG00000162231.93239.099002108.161400.619505.140604.20260HepG2SF3A3
    NXF1ENSG00000162231.92165.732001216.339100.8322024.8770023.40410HepG2SF3B4
    NXF1ENSG00000162231.91675.134301965.58950-0.230702.767302.06550HepG2SLBP
    NXF1ENSG00000162231.92447.192001854.464700.400002.137701.45380HepG2SNRNP70
    NXF1ENSG00000162231.91764.039201269.615200.474408.652807.92250HepG2SRSF1
    NXF1ENSG00000162231.92303.744001793.250600.361302.179301.30160HepG2SRSF3
    NXF1ENSG00000162231.93090.531802023.963400.6106016.2793014.93970HepG2SRSF5
    NXF1ENSG00000162231.91348.800201032.917300.384905.648304.90840HepG2SRSF9
    NXF1ENSG00000162231.92545.817201958.449600.378305.765105.07670HepG2SSB
    NXF1ENSG00000162231.92258.693501559.011400.534804.083602.72560HepG2STIP1
    NXF1ENSG00000162231.91980.249502301.72450-0.217002.677202.06290HepG2SUCLG1
    NXF1ENSG00000162231.91086.807601342.64450-0.305002.546301.64310HepG2SUPT6H
    NXF1ENSG00000162231.92281.207401363.182900.742708.074407.01620HepG2SUPV3L1
    NXF1ENSG00000162231.91947.638101141.236700.7710018.1308016.87700HepG2TAF15
    NXF1ENSG00000162231.91850.304901372.296200.431105.088304.45290HepG2TIAL1
    NXF1ENSG00000162231.93222.747101700.953300.9218017.4743015.84180HepG2U2AF1
    NXF1ENSG00000162231.94633.515701408.386701.718008.396406.59560HepG2U2AF2
    NXF1ENSG00000162231.91903.520301341.905900.504304.316003.41560HepG2XRN2
    NXF1ENSG00000162231.92033.569201669.942300.284104.329803.51990HepG2ZC3H8
    NXF1ENSG00000162231.91622.674202056.22290-0.341605.897805.17750HepG2ZNF622
    NXF1ENSG00000162231.91616.674701389.748300.218101.932601.44220K562AGGF1
    NXF1ENSG00000162231.91815.245401446.062700.327902.578701.94700K562AKAP8L
    NXF1ENSG00000162231.911351.466601881.445902.59290147.85830144.20100K562AQR
    NXF1ENSG00000162231.93933.969802878.243800.450703.917502.15590K562CKAP4
    NXF1ENSG00000162231.92563.763401722.109600.574003.298802.12170K562CNOT7
    NXF1ENSG00000162231.93846.246603037.067700.340702.903001.90470K562CELF1
    NXF1ENSG00000162231.91721.076102045.64940-0.249203.001601.73980K562DDX21
    NXF1ENSG00000162231.93596.018301958.739200.8764022.0044020.33900K562DDX47
    NXF1ENSG00000162231.91315.49170935.671500.491404.672302.90600K562DNAJC21
    NXF1ENSG00000162231.91568.08140991.812200.660803.660601.61640K562DNAJC2
    NXF1ENSG00000162231.91860.795501164.503500.676108.512606.83080K562EFTUD2
    NXF1ENSG00000162231.91968.23280885.060901.153007.154405.49370K562EIF3A
    NXF1ENSG00000162231.92084.588401246.737300.741503.529802.34850K562EIF3D
    NXF1ENSG00000162231.91620.67650874.788700.8895020.6806018.45170K562EIF3G
    NXF1ENSG00000162231.91463.95040712.390601.0390019.4026017.01070K562EIF4A3
    NXF1ENSG00000162231.9859.34780641.555100.421604.281602.79060K562EIF4B
    NXF1ENSG00000162231.93403.216502470.613100.461907.581606.04000K562EIF4G2
    NXF1ENSG00000162231.9782.50970621.850200.331402.565701.32450K562EWSR1
    NXF1ENSG00000162231.93063.963102126.963000.526502.584401.75950K562FMR1
    NXF1ENSG00000162231.92409.842101802.939100.418502.287501.46060K562FTO
    NXF1ENSG00000162231.9871.34080672.074900.374503.473601.45430K562FUBP3
    NXF1ENSG00000162231.92210.71210740.857801.5771069.5882066.85110K562FXR1
    NXF1ENSG00000162231.91961.237401405.843800.480207.387805.58180K562GLRX3
    NXF1ENSG00000162231.91891.516601109.841200.7691013.3164012.08810K562HNRNPC
    NXF1ENSG00000162231.91279.18420991.181000.367903.154301.93250K562HNRNPF
    NXF1ENSG00000162231.92391.386001704.180000.488702.733701.80730K562KRR1
    NXF1ENSG00000162231.91212.86370848.101300.516005.430504.23950K562MAGOH
    NXF1ENSG00000162231.91163.61070846.339400.459204.770103.52430K562MATR3
    NXF1ENSG00000162231.92690.310301947.783600.465802.703801.83970K562METAP2
    NXF1ENSG00000162231.93657.529302633.547300.473804.221602.82940K562MSI2
    NXF1ENSG00000162231.91947.553001478.039800.397903.159602.29600K562MTPAP
    NXF1ENSG00000162231.91746.354001205.089100.535103.732002.66890K562NAA15
    NXF1ENSG00000162231.91080.10830711.352300.602407.696205.67680K562NCBP2
    NXF1ENSG00000162231.93756.932702702.155100.475306.527004.20020K562NOL12
    NXF1ENSG00000162231.92744.808501654.449000.730304.545902.92840K562PABPC1
    NXF1ENSG00000162231.91230.99500754.550500.706009.120907.31600K562PCBP2
    NXF1ENSG00000162231.93048.211702125.784800.519905.226404.08110K562PCBP3
    NXF1ENSG00000162231.91462.879001083.619900.432903.971502.21790K562PHF6
    NXF1ENSG00000162231.92431.455901630.535400.576409.830008.35790K562POLR2G
    NXF1ENSG00000162231.92083.891501133.198300.8788013.8851012.19350K562PRPF8
    NXF1ENSG00000162231.91177.20210824.003900.514505.997305.05180K562PTBP1
    NXF1ENSG00000162231.97150.257202695.721801.4072022.4638020.05180K562PUF60
    NXF1ENSG00000162231.93842.415602866.639200.422605.936104.31910K562PUM1
    NXF1ENSG00000162231.93488.381802809.436900.312203.923002.77460K562PUM2
    NXF1ENSG00000162231.92646.800901434.335900.8838014.7983013.58230K562PUS1
    NXF1ENSG00000162231.91905.624201397.346600.447504.770104.01140K562RBM15
    NXF1ENSG00000162231.91879.07350789.972801.2500028.5903025.75060K562RBM22
    NXF1ENSG00000162231.91554.61610831.354700.9029013.6171011.22260K562NELFE
    NXF1ENSG00000162231.91671.492401154.222400.534104.310403.28700K562RPS19
    NXF1ENSG00000162231.91601.572701225.528000.386002.827001.81340K562RPS3
    NXF1ENSG00000162231.92289.641701452.890500.6561010.408408.38800K562SAFB
    NXF1ENSG00000162231.92021.431001502.100600.428303.736802.03990K562SDAD1
    NXF1ENSG00000162231.91647.82420941.535900.807403.570002.14820K562SF1
    NXF1ENSG00000162231.92306.236701620.406100.509108.019706.69160K562SF3A3
    NXF1ENSG00000162231.92891.507301898.194600.607106.410904.89470K562SF3B1
    NXF1ENSG00000162231.91114.42670631.540500.8193013.5818011.58780K562SF3B4
    NXF1ENSG00000162231.92138.057001081.248500.983505.492603.56700K562SNRNP200
    NXF1ENSG00000162231.91146.66170860.780600.413603.358102.20070K562SRFBP1
    NXF1ENSG00000162231.92152.878501660.124800.374906.900705.49870K562SRPK2
    NXF1ENSG00000162231.91408.19620807.829000.8016013.4286011.87100K562SRSF1
    NXF1ENSG00000162231.92410.698101635.488900.559609.317507.80540K562SYNCRIP
    NXF1ENSG00000162231.91350.87070817.509900.724508.948407.58100K562TARDBP
    NXF1ENSG00000162231.91060.66420788.597900.427504.087103.06500K562TIA1
    NXF1ENSG00000162231.9851.78590588.698000.532903.828102.50000K562U2AF1
    NXF1ENSG00000162231.9962.84990608.044000.663008.843907.39870K562U2AF2
    NXF1ENSG00000162231.93956.955003038.792900.380804.811502.96970K562UBE2L3
    NXF1ENSG00000162231.92114.036901741.415500.279601.948001.33780K562UPF1
    NXF1ENSG00000162231.92611.773201549.413000.7532026.3586024.18110K562WDR43
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".






    The Knockdown/knockout RNA-Seq assay for NXF1 is not available on ENCORE database.





    17 RBPs can affect the splicing of NXF1 :

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SENXF1ENSG00000162231.9chr11-6256636262566448625660106256604762567848625679580.129000.000100.00279includedHepG2U2AF1
    SENXF1ENSG00000162231.9chr11-625685656256867362566010625679586256880062568889-0.107000.000210.00550excludedHepG2U2AF1
    SENXF1ENSG00000162231.9chr11-625685656256863562566010625679586256880062568921-0.159000.000000.00005excludedK562AQR
    SENXF1ENSG00000162231.9chr11-6256636262566448625660106256604762567848625679580.056000.000110.01173includedHepG2FTO
    A3SSNXF1ENSG00000162231.9chr11-6256180962561938625618096256191262562406625624790.084000.000070.00971longerK562AGGF1
    A3SSNXF1ENSG00000162231.9chr11-625647896256500762564789625648586256601062567958-0.118000.000060.04193shorterK562FXR2
    A3SSNXF1ENSG00000162231.9chr11-6256180962561938625618096256191262562406625624790.088000.000030.00462longerK562AKAP8L
    A3SSNXF1ENSG00000162231.9chr11-6256478962565007625647896256485862566010625679580.142000.000930.03550longerK562U2AF2
    A3SSNXF1ENSG00000162231.9chr11-625635376256365362563537625636306256375862563817-0.251000.000000.00005shorterK562SF3B4
    A3SSNXF1ENSG00000162231.9chr11-6256478962565007625647896256485862566010625661020.126000.000000.00000longerHepG2U2AF2
    A3SSNXF1ENSG00000162231.9chr11-625617296256191262561729625618706256240662562479-0.066000.000310.01009shorterHepG2U2AF2
    A3SSNXF1ENSG00000162231.9chr11-6256478962565007625647896256485862566010625661070.105000.000000.00000longerK562AQR
    A3SSNXF1ENSG00000162231.9chr11-6256880062568921625688006256888962569033625691320.056000.000000.00000longerK562AQR
    A3SSNXF1ENSG00000162231.9chr11-6256180962562023625618096256191262562406625625130.187000.000000.00000longerK562AQR
    A3SSNXF1ENSG00000162231.9chr11-6256240662562570625624066256247962563372625634720.116000.000000.00000longerK562AQR
    A3SSNXF1ENSG00000162231.9chr11-6256784862568076625678486256795862568565625686350.273000.000000.00000longerK562AQR
    A3SSNXF1ENSG00000162231.9chr11-6255988962560018625598896255998662560112625601960.092000.000000.00000longerK562AQR
    A3SSNXF1ENSG00000162231.9chr11-6256011262560293625601126256017362561729625619740.072000.003770.02255longerK562AQR
    A3SSNXF1ENSG00000162231.9chr11-6257089062571134625708906257104462571263625714500.128000.000000.00000longerK562AQR
    A3SSNXF1ENSG00000162231.9chr11-6256921062569323625692106256929162569413625695790.102000.000000.00000longerK562AQR
    A3SSNXF1ENSG00000162231.9chr11-6256172962561938625617296256191262562406625624790.122000.000000.00001longerK562PUS1
    A3SSNXF1ENSG00000162231.9chr11-625617296256191262561729625618706256240662562479-0.067000.000800.09928shorterHepG2SFPQ
    A3SSNXF1ENSG00000162231.9chr11-6256478962565007625647896256485862566010625661070.056000.000000.00000longerHepG2U2AF1
    A3SSNXF1ENSG00000162231.9chr11-6256180962561938625618096256191262562406625624790.081000.000070.01151longerK562RBM15
    RINXF1ENSG00000162231.9chr11-6256601062567958625660106256604762567848625679580.380000.003860.05098includedK562SF3B4
    RINXF1ENSG00000162231.9chr11-625660106256795862566010625660476256784862567958-0.254000.000360.01162excludedK562HNRNPC
    RINXF1ENSG00000162231.9chr11-6256601062567958625660106256604762567848625679580.425000.000000.00000includedHepG2U2AF2
    RINXF1ENSG00000162231.9chr11-6256601062567958625660106256604762567848625679580.334000.000110.03317includedHepG2DKC1
    RINXF1ENSG00000162231.9chr11-6256601062567958625660106256604762567848625679580.207000.000000.00037includedHepG2FTO
    RINXF1ENSG00000162231.9chr11-6256601062567958625660106256604762567848625679580.240000.005750.04946includedHepG2TAF15
    RINXF1ENSG00000162231.9chr11-6256601062567958625660106256604762567848625679580.371000.000000.00000includedHepG2U2AF1
    RINXF1ENSG00000162231.9chr11-6256601062567958625660106256604762567848625679580.218000.002550.04093includedHepG2G3BP1
    RINXF1ENSG00000162231.9chr11-6256601062567958625660106256604762567848625679580.251000.002680.02113includedHepG2SF3B4
    RINXF1ENSG00000162231.9chr11-6256601062567958625660106256604762567848625679580.282000.005190.06714includedHepG2SRSF9
    RINXF1ENSG00000162231.9chr11-6256465462564891625646546256471062564789625648910.126000.000000.00000includedK562AQR
    RINXF1ENSG00000162231.9chr11-6256601062567958625660106256604762567848625679580.243000.000000.00001includedK562AQR
    RINXF1ENSG00000162231.9chr11-6256601062567958625660106256604762567848625679580.177000.001180.09318includedHepG2CDC40
    MXENXF1ENSG00000162231.9chr11-62568565625686736256880062568921625678486256795862569413625695180.075000.000000.000021includedK562AQR
    MXENXF1ENSG00000162231.9chr11-6256880062568889625694136256951862567848625679586256964862569732-0.061000.005310.037812includedK562AQR

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    The Knockdown/knockout RNA-Seq assay for NXF1 is not avaliable on ENCORE database.