NXF1      CRISPR in HepG2      Batch: BGHcLV47

Experiment Information (Status: Sequenced)
BGHcLV47-47BGHcLV47-48
idx00
TRCN#_or_BGC#BGC#0000196BGC#0000196
shRNA_or_gRNA_sequenceGTAGGTGGACTGGTCTCGGAGTAGGTGGACTGGTCTCGGA
PAMAGGAGG
NameNXF1-90FNXF1-90F
Sample_IDBGHcLV47-47BGHcLV47-48
transduction_Date1/28/251/28/25
daysD6D6
RBP_nameNXF1NXF1
qPCR_result
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc20802294
WB_result81.984.9
Ave_WB
WB_DONE_date2/5/25
MW70kd
IP
antibody_Cat#A303-914Alot # 1
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM00
Rep2_TPM00
ActionReadyReady
Library_start_date
repeat_library
Note
ID98349835




Western Blot
Western Blot info was not avaliable




Experiment Status
BGHcLV47-47BGHcLV47-48
Sample_IDBGHcLV47-47BGHcLV47-48
Sample Name
Sample NameNXF1-BGHcLV47-47NXF1-BGHcLV47-48
RBPNXF1NXF1
Cell_LineHepG2HepG2
Exp UID
StatusSequencedSequenced
Status_date2025-05-142025-05-14
ProjectENCORE2ENCORE2
Note
ID1416814169




Library-Prep Information
BGHcLV47-47BGHcLV47-48
Sample #2122
Sample NameNXF1-BGHcLV47-47NXF1-BGHcLV47-48
Sample_Name_Alias
Index Well PositionE10F10
Index_tableIDT_UniqueDualIndex_96_V2IDT_UniqueDualIndex_96_V2
LibPrep_date2025-04-232025-04-23
Lib_IDLib-250423Lib-250423
Tecan_Location
Tecan
Tecan_date
Size_bp270260
Peak_Molarity52.6049.00
libSampleQC_DNA_Well
RIN
libSample_RNA_Well
SampleQC_methodTapeStation_2022TapeStation_2022
SampleQC_date2025-04-222025-04-22
Sample_IDBGHcLV47-47BGHcLV47-48
RBPNXF1NXF1
Batch_IDBGHcLV47BGHcLV47
WB_result81.90084.900
Library DescriptionTruSeq mRNATruSeq mRNA
Repeat_Library_Suffix
Lib_StatusSendToSequenceSendToSequence
ProjectENCORE2ENCORE2
ID47324733




Sequencing Information
BGHcLV47-47BGHcLV47-48
Sample_IDBGHcLV47-47BGHcLV47-48
Sample NameNXF1-BGHcLV47-47NXF1-BGHcLV47-48
Pool IDPool-250422Pool-250422
LocalServer_folder
total_reads00
total_aligned_reads00
unique_aligned_reads00
percent_uniqueAligned
correlation_replicates
spikein_reads00
percent_spikeins
original_ReadLength
QC_StatusReadyToQCReadyToQC
ID34353436




Data Submission Information
DCC submission information was not avaliable




File Information
Files of the experiment was not avaliable in the database