CPE

General Information

Gene Name       : CPE
Gene ID             : ENSG00000109472.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CPE)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CPEENSG00000109472.130.000.000.00ENCSR000AEF
HepG2CPEENSG00000109472.13262.06252.71257.38ENCSR985KAT
K562CPEENSG00000109472.130.010.030.02ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CPE is not avaliable on ENCORE database.



Proteins bound to RNA
  • CPE RNA is bound by 30 proteins.  







eCLIP assay for CPE is not avaliable on ENCORE database.





30 proteins are bound to CPE RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr4166419396166419446+3'-UTR4.6566417.60999HepG2TIAL1
chr4166419335166419435+3'-UTR3.8866423.73044HepG2DDX6
chr4166418758166418803+3'-UTR,CDS3.5693210.60790HepG2TIAL1
chr4166419013166419060+3'-UTR3.241889.15095HepG2DDX6
chr4166418761166418799+3'-UTR3.5906712.19898HepG2LARP4
chr4166418820166418866+3'-UTR3.692327.52220HepG2TIAL1
chr4166419009166419055+3'-UTR3.372053.93607HepG2FUBP3
chr4166418885166418939+3'-UTR4.0750216.21300HepG2TIAL1
chr4166419351166419436+3'-UTR3.9829511.97445HepG2FUBP3
chr4166419230166419283+3'-UTR3.5155612.75070HepG2DDX55
chr4166419397166419448+3'-UTR6.3689722.16835HepG2TIA1
chr4166418764166418802+3'-UTR5.3967511.49275HepG2TIA1
chr4166419016166419051+3'-UTR3.947224.05830HepG2TIA1
chr4166418759166418793+3'-UTR3.1665313.08286HepG2BCLAF1
chr4166418758166418764+3'-UTR,CDS4.777677.54936HepG2TIA1
chr4166418766166418813+3'-UTR3.675897.11482HepG2FUBP3
chr4166419332166419362+3'-UTR3.2162015.47214HepG2LARP4
chr4166385541166385552+3'-UTR,CDS,intron-Proximal4.5564814.36035HepG2SND1
chr4166418823166418864+3'-UTR4.654045.28210HepG2TIA1
chr4166419230166419298+3'-UTR5.413829.99473HepG2TIA1
chr4166418813166418870+3'-UTR5.2470327.28257HepG2FUBP3
chr4166419369166419396+3'-UTR3.271727.56441HepG2TIAL1
chr4166300297166300478+5'-UTR,CDS,intron-Distal3.8737326.52555HepG2FTO
chr4166300340166300449+5'-UTR,CDS,intron-Distal3.0228214.92797HepG2NOL12
chr4166300173166300224+5'-UTR,intron-Distal5.9703477.38106HepG2DDX3X
chr4166300345166300437+5'-UTR,CDS,intron-Distal3.604116.44986HepG2PCBP1
chr4166300247166300319+5'-UTR,intron-Distal4.6483747.05637HepG2RPS3
chr4166300327166300453+5'-UTR,CDS,intron-Distal5.16226400.00000HepG2DDX3X
chr4166300236166300327+5'-UTR,intron-Distal5.19427400.00000HepG2DDX3X
chr4166300335166300449+5'-UTR,CDS,intron-Distal5.0789258.01802HepG2RPS3
chr4166300358166300500+5'-UTR,CDS,intron-Distal3.3264927.45732HepG2SDAD1
chr4166300598166300644+CDS,intron-Distal3.611965.81252HepG2LIN28B
chr4166300540166300572+CDS,intron-Distal3.8843127.59717HepG2DDX3X
chr4166403394166403414+CDS5.006245.41449HepG2ZNF800
chr4166405573166405597+CDS,intron-Proximal3.248225.81784HepG2SND1
chr4166414388166414422+CDS4.7398511.49630HepG2LIN28B
chr4166300535166300584+CDS,intron-Distal3.7347816.13331HepG2SND1
chr4166385570166385603+CDS4.2488111.52585HepG2SND1
chr4166418685166418738+CDS3.584665.51367HepG2G3BP1
chr4166405617166405690+CDS3.2763016.11511HepG2SND1
chr4166300450166300515+CDS,intron-Distal5.4863317.81536HepG2RPS3
chr4166408655166408669+CDS3.411479.45767HepG2SND1
chr4166300454166300501+CDS,intron-Distal4.6522049.31611HepG2DDX3X
chr4166388840166388931+CDS3.8783930.55068HepG2RPS3
chr4166300601166300673+CDS,intron-Distal4.4095217.48189HepG2RPS3
chr4166388840166388852+CDS3.724348.06814HepG2SND1
chr4166300609166300634+CDS,intron-Distal3.6860031.96762HepG2DDX3X
chr4166416764166416779+CDS3.652158.14061HepG2SND1
chr4166414326166414421+CDS3.3817412.51469HepG2ZNF800
chr4166385718166385737+CDS3.292338.61314HepG2SND1
chr4166416812166416822+CDS3.938448.08603HepG2BCLAF1
chr4166416710166416740+CDS,intron-Proximal5.4751110.31900HepG2LIN28B
chr4166408589166408606+CDS,intron-Proximal3.429585.50142HepG2ZNF800
chr4166408615166408697+CDS3.5424315.44328HepG2ZNF800
chr4166403472166403484+CDS3.621254.30206HepG2ZNF800
chr4166300525166300592+CDS,intron-Distal4.5170123.33437HepG2RPS3
chr4166385641166385655+CDS3.487388.35445HepG2SND1
chr4166405694166405754+CDS3.479109.06706HepG2LIN28B
chr4166300597166300680+CDS,intron-Distal4.7444369.43304HepG2SND1
chr4166300743166300806+intron-Distal,intron-Proximal4.760605.02240HepG2PRPF4
chr4166334214166334274+intron-Distal3.532614.48652HepG2PTBP1
chr4166327427166327487+intron-Distal3.852543.29239HepG2CSTF2
chr4166300746166300800+intron-Distal,intron-Proximal5.547899.57755HepG2GTF2F1
chr4166300959166301048+intron-Distal3.284114.24473HepG2CSTF2T
chr4166374472166374548+intron-Distal5.057077.89455HepG2PTBP1
chr4166323526166323609+intron-Distal3.923813.00241HepG2SFPQ
chr4166389340166389474+intron-Distal5.460749.51434HepG2PTBP1
chr4166301472166301575+intron-Distal4.251013.48768HepG2KHSRP
chr4166311225166311245+intron-Distal3.122493.60923HepG2HNRNPL
chr4166319559166319614+intron-Distal3.334514.23017HepG2HNRNPL
chr4166356973166357049+intron-Distal3.136603.12105HepG2HNRNPL
chr4166312617166312702+intron-Distal5.7760314.00192HepG2QKI
chr4166327801166327865+intron-Distal3.941713.88068HepG2CSTF2
chr4166374548166374589+intron-Distal5.071618.39705HepG2PTBP1
chr4166327137166327212+intron-Distal3.997333.88679HepG2CSTF2
chr4166300822166300911+intron-Distal3.605933.69530HepG2CSTF2T
chr4166300828166300874+intron-Distal3.709185.60571HepG2FAM120A
chr4166323908166323973+intron-Distal4.1436115.03187HepG2CSTF2
chr4166364404166364474+intron-Distal4.125827.55717HepG2PTBP1
chr4166325281166325355+intron-Distal4.516366.62984HepG2CSTF2
chr4166323896166323908+intron-Distal4.149625.06031HepG2CSTF2
chr4166323637166323723+intron-Distal3.477335.37079HepG2CSTF2
chr4166300733166300799+intron-Distal,intron-Proximal3.671475.39685HepG2CSTF2T
chr4166327709166327801+intron-Distal4.5349412.52356HepG2CSTF2
chr4166377692166377757+intron-Distal4.625824.52538HepG2PTBP1
chr4166334293166334402+intron-Distal5.0792617.02345HepG2PTBP1
chr4166301606166301719+intron-Distal5.3981913.16417HepG2CSTF2
chr4166323723166323808+intron-Distal3.237544.05766HepG2CSTF2
chr4166350209166350281+intron-Distal3.461094.70908HepG2QKI
chr4166300720166300801+intron-Distal,intron-Proximal5.265153.77881HepG2PCBP2
chr4166323306166323352+intron-Distal3.708683.77350HepG2CSTF2
chr4166323518166323584+intron-Distal4.264784.84037HepG2CSTF2
chr4166325449166325543+intron-Distal4.520815.14525HepG2SRSF9
chr4166300738166300804+intron-Distal,intron-Proximal4.886209.13646HepG2FAM120A
chr4166332919166333022+intron-Distal3.8678611.85326HepG2CSTF2
chr4166350168166350209+intron-Distal3.278593.59771HepG2QKI
chr4166334140166334207+intron-Distal5.6022813.33094HepG2RBFOX2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CPE is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CPE is not available on ENCORE database.

  • 133 RBPs can affect the levels of CPE.  








The Knockdown/knockout RNA-Seq assay for CPE is not available on ENCORE database.





133 RBPs can affect the gene expression of CPE :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CPEENSG00000109472.96267.885108833.25410-0.495007.368205.71590HepG2AATF
CPEENSG00000109472.99619.0034012636.19910-0.393603.860002.75930HepG2ABCF1
CPEENSG00000109472.99418.4197012555.10690-0.414706.945006.06920HepG2ACO1
CPEENSG00000109472.96324.396809378.16640-0.568407.770106.20630HepG2ADAR
CPEENSG00000109472.99946.0622024878.99960-1.3227028.7717027.27420HepG2AKAP1
CPEENSG00000109472.98171.3406012613.06580-0.6263024.0663022.14890HepG2AKAP8L
CPEENSG00000109472.912631.4569020585.64660-0.7046010.788409.31200HepG2ASCC1
CPEENSG00000109472.917173.9577011400.598100.5910010.623308.13140HepG2ATP5C1
CPEENSG00000109472.917328.2565014135.083000.293706.084005.12840HepG2AUH
CPEENSG00000109472.96238.253109327.50550-0.580306.021704.61290HepG2BCCIP
CPEENSG00000109472.914192.158308104.988000.808104.441303.32600HepG2BCLAF1
CPEENSG00000109472.917171.669007862.661801.1268033.5884031.90720HepG2BOP1
CPEENSG00000109472.912830.355109466.019400.438606.137704.35710HepG2BUD13
CPEENSG00000109472.923067.242409288.554801.3122018.0410016.39150HepG2CALR
CPEENSG00000109472.98890.3898016144.45890-0.8607010.133908.29100HepG2CCAR1
CPEENSG00000109472.913122.398807218.189000.8622018.2284016.64730HepG2CPSF6
CPEENSG00000109472.912333.022009617.178400.358706.848005.25940HepG2YBX3
CPEENSG00000109472.94659.743105761.70000-0.306202.602301.55490HepG2CSTF2
CPEENSG00000109472.924138.9346016475.966600.5509030.6993028.73540HepG2DAZAP1
CPEENSG00000109472.98043.7363011611.10660-0.5296021.9095020.09860HepG2DDX19B
CPEENSG00000109472.911830.014209630.617900.296705.033503.50600HepG2DDX1
CPEENSG00000109472.98347.507109745.71070-0.223401.909601.33400HepG2DDX21
CPEENSG00000109472.929913.2273023832.979300.327702.757502.13140HepG2DDX3X
CPEENSG00000109472.917232.9605010914.700800.658804.066502.84830HepG2DDX5
CPEENSG00000109472.914719.206809108.121300.692408.575606.94760HepG2DHX30
CPEENSG00000109472.96927.6438010447.49870-0.592708.334606.83030HepG2EEF2
CPEENSG00000109472.910710.532108709.657600.298202.581101.50590HepG2EFTUD2
CPEENSG00000109472.924774.8692019681.270200.332002.851202.24980HepG2EIF2S1
CPEENSG00000109472.94334.066908481.10420-0.9685017.6894015.65230HepG2EIF3D
CPEENSG00000109472.97400.156709203.27620-0.314603.954502.68750HepG2EIF3G
CPEENSG00000109472.911402.3553021175.96710-0.8931010.843409.52630HepG2EIF4B
CPEENSG00000109472.920543.8065016254.677700.337708.319607.01290HepG2EIF4G1
CPEENSG00000109472.929077.6823015570.918500.9010020.4057018.35800HepG2EIF4G2
CPEENSG00000109472.913873.6375016228.77570-0.226204.150903.44040HepG2ETF1
CPEENSG00000109472.99627.0182012267.48480-0.349704.482803.42550HepG2EWSR1
CPEENSG00000109472.96392.309507579.87510-0.245802.679001.53280HepG2FAM120A
CPEENSG00000109472.912718.167809287.336300.453506.799305.14760HepG2FASTKD2
CPEENSG00000109472.99318.2551012759.18360-0.453404.577303.60550HepG2FIP1L1
CPEENSG00000109472.911041.593207633.408600.532406.194504.37650HepG2FKBP4
CPEENSG00000109472.912257.159807230.899900.761303.601402.43690HepG2FTO
CPEENSG00000109472.99076.2063021943.17860-1.2736033.0869031.02720HepG2FXR1
CPEENSG00000109472.98791.6745020356.91890-1.2113026.3388024.35730HepG2G3BP1
CPEENSG00000109472.917078.7059021609.64560-0.339503.099802.15670HepG2G3BP2
CPEENSG00000109472.94590.131307551.34680-0.7182011.680609.91520HepG2GEMIN5
CPEENSG00000109472.97526.161109834.99410-0.386003.141802.05340HepG2GNB2L1
CPEENSG00000109472.95646.505108181.93360-0.535105.877104.96770HepG2GPKOW
CPEENSG00000109472.95553.6000010664.52780-0.9413010.607308.43740HepG2GRSF1
CPEENSG00000109472.914826.5418011985.782800.306806.593205.16610HepG2HDGF
CPEENSG00000109472.94454.166009533.84790-1.0979034.0690032.28470HepG2HNRNPA1
CPEENSG00000109472.920838.6268015141.955400.460605.406204.17430HepG2HNRNPA2B1
CPEENSG00000109472.914598.1928010604.628800.461004.858703.95830HepG2HNRNPC
CPEENSG00000109472.96294.831309978.98050-0.664706.120603.89340HepG2HNRNPD
CPEENSG00000109472.914271.2867011819.117200.271901.986301.37150HepG2HNRNPF
CPEENSG00000109472.911119.0111020609.94880-0.8903020.3724018.63700HepG2HNRNPK
CPEENSG00000109472.912866.0533015008.30050-0.222205.700104.76320HepG2HNRNPL
CPEENSG00000109472.912272.252807808.210300.652209.090008.02230HepG2HNRNPLL
CPEENSG00000109472.96380.969308802.33320-0.464107.686406.22150HepG2HNRNPM
CPEENSG00000109472.98365.0940010534.51850-0.332707.769306.79180HepG2HNRNPU
CPEENSG00000109472.914929.1811011638.449700.359105.350804.37620HepG2IGF2BP1
CPEENSG00000109472.915495.5787020692.86230-0.417304.283603.45980HepG2IGF2BP2
CPEENSG00000109472.913920.1826010760.664300.3713014.8492013.30580HepG2ILF2
CPEENSG00000109472.914334.8883010976.832600.385002.721801.54100HepG2KHDRBS1
CPEENSG00000109472.913264.7123011476.172700.208904.784803.45100HepG2KIF1C
CPEENSG00000109472.923022.1869017040.360500.434003.334102.42120HepG2LARP4
CPEENSG00000109472.97343.0161010117.53940-0.462405.680503.95550HepG2LIN28B
CPEENSG00000109472.910979.1965021950.82740-0.9995019.9654018.28760HepG2MAGOH
CPEENSG00000109472.97660.5799022074.11740-1.5268039.3147037.15280HepG2MATR3
CPEENSG00000109472.96955.3226010324.93090-0.5699011.131109.61890HepG2MSI2
CPEENSG00000109472.913610.170807964.334800.773007.163905.56790HepG2MTPAP
CPEENSG00000109472.98618.5639016337.54240-0.9227035.6762033.23670HepG2NOL12
CPEENSG00000109472.913291.058806923.795600.9407022.8183020.97670HepG2NSUN2
CPEENSG00000109472.912009.4278019506.12940-0.6998033.2343031.53180HepG2PCBP1
CPEENSG00000109472.913929.9260010537.594300.402502.306901.35710HepG2PCBP2
CPEENSG00000109472.95774.330607013.65070-0.280503.531302.13950HepG2PKM
CPEENSG00000109472.96540.906908286.12140-0.341203.010302.20830HepG2PRPF4
CPEENSG00000109472.97719.4109011078.09560-0.521103.516902.15340HepG2PRPF6
CPEENSG00000109472.98916.1198019848.13990-1.1545080.7949078.81480HepG2PTBP1
CPEENSG00000109472.919117.3477015595.653800.293603.267902.62750HepG2PUF60
CPEENSG00000109472.97363.3601012788.00980-0.7964040.1198038.32220HepG2PUS1
CPEENSG00000109472.912144.0451021496.18790-0.8238031.0273029.28950HepG2QKI
CPEENSG00000109472.916729.7154010170.506700.717905.137704.19240HepG2RAVER1
CPEENSG00000109472.98872.4513013564.29330-0.6124019.4904018.37260HepG2RBM22
CPEENSG00000109472.914122.0941019509.11090-0.466207.962806.87020HepG2RBM25
CPEENSG00000109472.98390.7958011616.91370-0.469305.284203.89830HepG2RBM27
CPEENSG00000109472.915949.5457010136.816300.653805.220902.40820HepG2RBM34
CPEENSG00000109472.95465.639309433.42470-0.7874011.331309.23280HepG2RCC2
CPEENSG00000109472.97295.4362022089.13730-1.59830161.24840158.80510HepG2NELFE
CPEENSG00000109472.910302.0175020572.91460-0.9978061.0960059.02590HepG2RECQL
CPEENSG00000109472.916285.402709987.828800.705205.948204.59350HepG2RPS10
CPEENSG00000109472.94939.959608252.45850-0.7403017.2820015.93960HepG2RPS19
CPEENSG00000109472.910893.080606998.557300.638207.942706.69540HepG2RRP9
CPEENSG00000109472.910290.494709381.462900.133301.962301.40430HepG2SAFB2
CPEENSG00000109472.95430.5738011471.61880-1.078903.807102.16580HepG2SF1
CPEENSG00000109472.96908.9873014238.71540-1.0433012.2767010.79840HepG2SF3A3
CPEENSG00000109472.913834.248907728.328200.8399018.4620016.80710HepG2SF3B1
CPEENSG00000109472.915224.9834020664.61210-0.4407014.4087013.22230HepG2SF3B4
CPEENSG00000109472.93140.0088011123.60860-1.824808.645305.92950HepG2SFPQ
CPEENSG00000109472.922182.9604014953.895700.5688032.8156030.93750HepG2SLBP
CPEENSG00000109472.917702.353309920.431200.835404.254002.28230HepG2SLTM
CPEENSG00000109472.98897.3613010940.38520-0.2982010.037308.93400HepG2SMN1
CPEENSG00000109472.96311.653608599.21270-0.446202.753501.97430HepG2SNRNP70
CPEENSG00000109472.98242.0329021569.32540-1.38790147.15470145.07130HepG2SRSF1
CPEENSG00000109472.93595.906908316.44010-1.2096021.5161018.64140HepG2SRSF3
CPEENSG00000109472.917914.6585015398.491800.218303.920503.19780HepG2SRSF5
CPEENSG00000109472.914251.8366011611.915300.295405.340804.42690HepG2SRSF7
CPEENSG00000109472.913261.9578017547.74710-0.4040012.9758011.93810HepG2SRSF9
CPEENSG00000109472.97512.8117013301.89260-0.8242046.6420045.16370HepG2SSB
CPEENSG00000109472.912762.1214016198.92320-0.344002.547701.31530HepG2SSRP1
CPEENSG00000109472.912791.808909504.177800.428502.438001.31220HepG2SUB1
CPEENSG00000109472.915011.4602017512.28000-0.222305.159404.35520HepG2SUCLG1
CPEENSG00000109472.913854.523708614.310200.6854014.7109012.67610HepG2SUPT6H
CPEENSG00000109472.911698.337909129.503900.357603.095602.38450HepG2SUPV3L1
CPEENSG00000109472.912787.1093019387.19600-0.6004018.9496017.66980HepG2TAF15
CPEENSG00000109472.915378.382307611.770401.0145026.2403024.45560HepG2TARDBP
CPEENSG00000109472.910560.4312015911.07450-0.591402.678901.62760HepG2TBRG4
CPEENSG00000109472.98163.373306119.246600.415703.896702.73630HepG2TFIP11
CPEENSG00000109472.914617.7154017814.35620-0.285302.930802.07210HepG2TIA1
CPEENSG00000109472.98440.9834010236.30640-0.278203.631703.07530HepG2TIAL1
CPEENSG00000109472.98962.5444010327.75430-0.204503.214202.61660HepG2TRIM56
CPEENSG00000109472.911360.7640015236.36880-0.423506.782005.31890HepG2TUFM
CPEENSG00000109472.92930.775105393.14630-0.8798015.1872013.44480HepG2UCHL5
CPEENSG00000109472.99815.6480012978.99520-0.403003.248702.12370HepG2UTP18
CPEENSG00000109472.95640.5485012191.38380-1.1120016.2765015.00120HepG2UTP3
CPEENSG00000109472.916000.5976010361.251000.626805.464603.91700HepG2XPO5
CPEENSG00000109472.98006.9963011183.42540-0.482003.318402.15510HepG2XRCC6
CPEENSG00000109472.96117.544508986.99250-0.554906.880805.75250HepG2XRN2
CPEENSG00000109472.910287.613508177.086300.3311010.238109.08240HepG2ZC3H8
CPEENSG00000109472.925.860204.600902.490602.740101.76970K562CELF1
CPEENSG00000109472.94.6758031.87390-2.769104.668303.63930K562MTPAP
CPEENSG00000109472.910.3988035.41280-1.767902.937902.17290K562NSUN2
CPEENSG00000109472.92.6639032.67430-3.616606.505103.89640K562NUFIP2
CPEENSG00000109472.910.2015034.94620-1.776403.050202.19580K562SF3A3
CPEENSG00000109472.97.7811035.80340-2.202104.018802.91110K562SRPK2
CPEENSG00000109472.913.5953037.54910-1.465702.479101.79750K562UPF1
CPEENSG00000109472.93.6086032.12940-3.154405.658204.38740K562WDR3
CPEENSG00000109472.93.9194033.41250-3.091705.987604.79250K562WDR43
CPEENSG00000109472.931.534808.177401.947103.322902.36610K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CPE is not available on ENCORE database.






No RBPs affect the alternative splcing events of CPE on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CPE is not avaliable on ENCORE database.