C8orf4

General Information

Gene Name       : C8orf4
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: C8orf4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for C8orf4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • C8orf4 RNA is bound by 9 proteins.  







eCLIP assay for C8orf4 is not avaliable on ENCORE database.





9 proteins are bound to C8orf4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr84001185940011940+3'-UTR4.560295.56003HepG2AKAP1
chr84001145240011546+3'-UTR4.5549811.45606HepG2UPF1
chr84001194040012003+3'-UTR5.344805.58306HepG2AKAP1
chr84001145040011530+3'-UTR4.399117.93263HepG2AKAP1
chr84001233340012387+3'-UTR4.444573.69311HepG2CSTF2
chr84001154640011615+3'-UTR5.172494.20997HepG2UPF1
chr84001158840011670+3'-UTR4.667215.41449HepG2ZNF800
chr84001146840011512+3'-UTR3.454684.18161HepG2RBM15
chr84001147640011536+3'-UTR3.3638611.71420HepG2BCLAF1
chr84001178240011842+3'-UTR4.731297.75117HepG2TIA1
chr84001142640011542+3'-UTR3.6942310.18571HepG2GRWD1
chr84001177840011855+3'-UTR4.459747.50773HepG2UPF1
chr84001178040011830+3'-UTR4.630576.08938HepG2AKAP1
chr84001145240011476+3'-UTR3.080347.90382HepG2BCLAF1
chr84001186540011954+3'-UTR4.517836.78793HepG2UPF1
chr84001178040011823+3'-UTR3.459764.88776HepG2PRPF4
chr84001154840011597+3'-UTR3.895733.52299HepG2AKAP1
chr84001161840011662+3'-UTR4.269236.73614HepG2RBM15
chr84001159740011712+3'-UTR3.189755.23616HepG2AKAP1
chr84001126240011334+CDS3.6321112.54952HepG2BCLAF1
chr84001126440011299+CDS4.479673.80461HepG2RBM15
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for C8orf4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for C8orf4 is not available on ENCORE database.

  • 126 RBPs can affect the levels of C8orf4.  








The Knockdown/knockout RNA-Seq assay for C8orf4 is not available on ENCORE database.





126 RBPs can affect the gene expression of C8orf4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
C8orf4ENSG00000176907.31623.304601181.750900.457904.666403.30650HepG2AATF
C8orf4ENSG00000176907.3552.292602900.73810-2.3929068.2519065.18660HepG2ABCF1
C8orf4ENSG00000176907.33328.646402221.986600.5830018.2151016.94650HepG2ACO1
C8orf4ENSG00000176907.3356.340201662.90260-2.2224065.6490061.98970HepG2ADAR
C8orf4ENSG00000176907.32813.539104081.82580-0.536804.916604.23470HepG2AKAP1
C8orf4ENSG00000176907.31123.139202232.50710-0.9911034.9857032.77610HepG2AKAP8L
C8orf4ENSG00000176907.32114.356303377.42620-0.675708.713407.37130HepG2ASCC1
C8orf4ENSG00000176907.31770.850701214.023700.544505.232603.93760HepG2BCCIP
C8orf4ENSG00000176907.31386.016102172.88400-0.6487010.300408.08390HepG2BUD13
C8orf4ENSG00000176907.34950.778501849.852501.4201030.7208028.72090HepG2CALR
C8orf4ENSG00000176907.32670.382102035.120000.391804.031101.38790HepG2CEBPZ
C8orf4ENSG00000176907.3853.654603208.76860-1.9103058.6664055.93140HepG2CIRBP
C8orf4ENSG00000176907.36318.948801803.040401.8092068.0843065.48620HepG2CPSF6
C8orf4ENSG00000176907.33401.773602388.299300.510207.048605.36200HepG2CPSF7
C8orf4ENSG00000176907.31266.458801705.32290-0.429205.561204.11930HepG2YBX3
C8orf4ENSG00000176907.3297.09650750.10390-1.3362011.297309.37070HepG2CSTF2
C8orf4ENSG00000176907.32138.346301210.129600.821208.270305.61410HepG2CSTF2T
C8orf4ENSG00000176907.33288.189102451.509400.423504.138503.26060HepG2DAZAP1
C8orf4ENSG00000176907.3707.697402055.06410-1.5380085.7589082.92080HepG2DDX19B
C8orf4ENSG00000176907.3231.914001303.46730-2.4907080.2961077.56070HepG2DDX21
C8orf4ENSG00000176907.3834.170501275.84340-0.613008.031706.48940HepG2DDX24
C8orf4ENSG00000176907.3583.784501116.97230-0.936105.636403.86960HepG2DDX27
C8orf4ENSG00000176907.31442.66030904.469700.673508.124305.94150HepG2DDX28
C8orf4ENSG00000176907.32905.388101193.561101.2834024.5194022.57700HepG2DDX55
C8orf4ENSG00000176907.36063.397902047.486401.5662019.1346016.82990HepG2DDX59
C8orf4ENSG00000176907.35478.542703358.653700.705808.335207.31790HepG2DDX6
C8orf4ENSG00000176907.31193.644401614.99000-0.436204.343003.12490HepG2DHX30
C8orf4ENSG00000176907.3300.907402125.86430-2.82070183.70910180.86960HepG2DKC1
C8orf4ENSG00000176907.32153.649501674.397900.363005.057204.13200HepG2DNAJC21
C8orf4ENSG00000176907.31229.519901659.75970-0.432908.035706.99670HepG2DNAJC2
C8orf4ENSG00000176907.3376.843202110.51900-2.4856085.1635081.74820HepG2EEF2
C8orf4ENSG00000176907.31227.617701759.41880-0.519205.185803.66500HepG2EFTUD2
C8orf4ENSG00000176907.32853.172701200.555901.2488019.5458016.88120HepG2AGO1
C8orf4ENSG00000176907.32306.644603229.04620-0.485304.829804.05780HepG2EIF2S1
C8orf4ENSG00000176907.31516.138802200.06600-0.537108.054306.18440HepG2EIF2S2
C8orf4ENSG00000176907.31307.072101713.26240-0.390402.669801.78080HepG2EIF3D
C8orf4ENSG00000176907.3700.483601231.11480-0.8135013.3647011.36340HepG2EIF3G
C8orf4ENSG00000176907.31063.476303568.61640-1.7466041.0027038.59790HepG2EIF4A3
C8orf4ENSG00000176907.31299.004202512.43900-0.9517018.5430016.11300HepG2ESF1
C8orf4ENSG00000176907.32957.747403464.19310-0.228002.827302.22110HepG2ETF1
C8orf4ENSG00000176907.32591.013402171.364400.254802.208401.46250HepG2EWSR1
C8orf4ENSG00000176907.3864.196701166.33500-0.432603.283701.38300HepG2EXOSC9
C8orf4ENSG00000176907.32859.064701242.315701.2024033.0005030.10030HepG2FASTKD2
C8orf4ENSG00000176907.33844.422702928.940300.392302.520401.78180HepG2FIP1L1
C8orf4ENSG00000176907.31650.766402293.73850-0.474603.202601.42510HepG2FMR1
C8orf4ENSG00000176907.34583.919201806.141201.343609.595107.73440HepG2FTO
C8orf4ENSG00000176907.31634.561102344.00330-0.520106.716805.52290HepG2FUBP3
C8orf4ENSG00000176907.3829.092401577.63060-0.928203.286002.06650HepG2FUS
C8orf4ENSG00000176907.31368.647603600.15860-1.3953033.1609031.09700HepG2FXR1
C8orf4ENSG00000176907.31628.615003339.89890-1.0362017.1170015.53340HepG2G3BP1
C8orf4ENSG00000176907.3618.239003545.43820-2.5197096.0880092.41620HepG2G3BP2
C8orf4ENSG00000176907.3476.426501525.43630-1.6789038.8325036.12400HepG2GEMIN5
C8orf4ENSG00000176907.3703.993802043.87300-1.5377031.4184029.53940HepG2GPKOW
C8orf4ENSG00000176907.32312.538203437.17790-0.571704.123202.76700HepG2GRSF1
C8orf4ENSG00000176907.32434.364002121.420200.198402.253101.36590HepG2HDGF
C8orf4ENSG00000176907.32396.085001510.163600.665904.062302.35840HepG2HLTF
C8orf4ENSG00000176907.3201.743901690.44070-3.06680119.41860116.60740HepG2HNRNPA1
C8orf4ENSG00000176907.32299.147003065.30110-0.414902.812301.39940HepG2HNRNPAB
C8orf4ENSG00000176907.32326.610001880.351700.307102.628701.95120HepG2HNRNPC
C8orf4ENSG00000176907.32607.897101998.412700.383906.544605.50590HepG2HNRNPF
C8orf4ENSG00000176907.31883.233103381.42740-0.8444015.1602013.66120HepG2HNRNPK
C8orf4ENSG00000176907.33759.141302233.056300.7513036.6479034.52940HepG2HNRNPL
C8orf4ENSG00000176907.31342.483302020.54080-0.589808.942807.39900HepG2HNRNPM
C8orf4ENSG00000176907.32242.404501867.916300.263503.514402.83940HepG2HNRNPU
C8orf4ENSG00000176907.31413.835903395.01400-1.2638027.6517025.78160HepG2IGF2BP2
C8orf4ENSG00000176907.32452.000401908.006300.361808.162106.97070HepG2ILF2
C8orf4ENSG00000176907.31838.400503414.65490-0.8933010.445308.41500HepG2KHSRP
C8orf4ENSG00000176907.31511.066602031.23500-0.426809.296707.52460HepG2KIF1C
C8orf4ENSG00000176907.31050.470903601.41350-1.7775049.3997046.89030HepG2MAGOH
C8orf4ENSG00000176907.31556.601803621.63950-1.2182022.3214020.66790HepG2MATR3
C8orf4ENSG00000176907.32957.231302370.012700.319302.965502.12870HepG2MSI2
C8orf4ENSG00000176907.33373.405601990.223300.7612014.0254011.33700HepG2NAA15
C8orf4ENSG00000176907.32280.703703707.00570-0.700808.744007.65100HepG2NCBP2
C8orf4ENSG00000176907.32941.164902430.925900.274802.414401.70450HepG2NOL12
C8orf4ENSG00000176907.31240.961701729.50740-0.478904.857003.87630HepG2NSUN2
C8orf4ENSG00000176907.3408.560201280.77720-1.6484018.5013015.24200HepG2PA2G4
C8orf4ENSG00000176907.32288.129703393.57480-0.568603.204902.24510HepG2PABPC1
C8orf4ENSG00000176907.32669.600103301.58900-0.306502.138701.49720HepG2PABPC4
C8orf4ENSG00000176907.33419.034301848.856200.8869011.7673010.21740HepG2PARN
C8orf4ENSG00000176907.32448.070603384.34680-0.467203.516002.84950HepG2PCBP1
C8orf4ENSG00000176907.32541.083601430.769600.828604.513302.39470HepG2PHF6
C8orf4ENSG00000176907.31057.126601416.82690-0.422504.826003.21900HepG2PKM
C8orf4ENSG00000176907.31305.181701666.02360-0.352204.264703.37040HepG2PPIL4
C8orf4ENSG00000176907.3733.672401570.29980-1.097803.675502.28150HepG2PRPF6
C8orf4ENSG00000176907.32589.022303443.98420-0.411702.752102.20560HepG2PTBP1
C8orf4ENSG00000176907.3699.797902320.60560-1.7295057.9601055.67640HepG2PUF60
C8orf4ENSG00000176907.31797.573902463.51190-0.454705.863405.06510HepG2PUM1
C8orf4ENSG00000176907.3818.282902263.25180-1.4677079.2751076.97460HepG2PUS1
C8orf4ENSG00000176907.32869.091401441.823800.992608.205407.03180HepG2RAVER1
C8orf4ENSG00000176907.31234.174302203.59520-0.8363010.468707.01850HepG2RBM14
C8orf4ENSG00000176907.35328.000503442.714800.6299013.0446011.39410HepG2RBM15
C8orf4ENSG00000176907.31755.635402895.45670-0.721809.633208.79910HepG2RBM22
C8orf4ENSG00000176907.3619.436203832.58710-2.6293044.6755043.09470HepG2NELFE
C8orf4ENSG00000176907.31135.053303569.96330-1.6531023.9861022.48610HepG2RECQL
C8orf4ENSG00000176907.33087.203802152.686500.520102.232301.60950HepG2RPLP0
C8orf4ENSG00000176907.31181.077501667.09480-0.497206.078905.20860HepG2RPS19
C8orf4ENSG00000176907.32199.458603727.68460-0.761107.605806.29700HepG2RPS3A
C8orf4ENSG00000176907.32424.558801567.521000.629104.116202.22990HepG2RTF1
C8orf4ENSG00000176907.3691.608402483.90230-1.8446033.4553031.07560HepG2SF3A3
C8orf4ENSG00000176907.32060.237001400.852100.556403.500201.68500HepG2SND1
C8orf4ENSG00000176907.32877.996601426.787901.012203.572602.04440HepG2SNRNP200
C8orf4ENSG00000176907.3870.461303742.29900-2.1041036.9047035.61220HepG2SRSF1
C8orf4ENSG00000176907.31994.003402291.36380-0.200501.957401.41960HepG2SRSF5
C8orf4ENSG00000176907.33116.837301963.352800.6667020.0459018.48330HepG2SRSF7
C8orf4ENSG00000176907.339.922902839.55450-6.15230281.66010279.03450HepG2SSB
C8orf4ENSG00000176907.32718.220801955.898100.474703.242301.90840HepG2STAU1
C8orf4ENSG00000176907.32487.799903242.34940-0.382202.413701.39530HepG2STIP1
C8orf4ENSG00000176907.32301.044501347.295100.772104.219002.72030HepG2SUB1
C8orf4ENSG00000176907.33210.093001977.349100.698904.057402.93060HepG2SUPT6H
C8orf4ENSG00000176907.32278.431001901.176700.261001.922501.30300HepG2TARDBP
C8orf4ENSG00000176907.3928.207504536.04460-2.2889012.6292010.55620HepG2TBRG4
C8orf4ENSG00000176907.31015.07760796.543500.349702.521301.56420HepG2TFIP11
C8orf4ENSG00000176907.3735.963901814.84630-1.3021028.9789027.67590HepG2TIAL1
C8orf4ENSG00000176907.32507.797501831.266600.453509.456008.50790HepG2TRIM56
C8orf4ENSG00000176907.31241.232902267.27490-0.8692017.9269015.50480HepG2TUFM
C8orf4ENSG00000176907.33488.481902399.967800.539505.678504.45290HepG2UBE2L3
C8orf4ENSG00000176907.31144.91230702.042600.705508.322007.00760HepG2UCHL5
C8orf4ENSG00000176907.31771.104002202.84870-0.314703.974103.16070HepG2UPF1
C8orf4ENSG00000176907.32675.955702126.753000.331303.772803.09060HepG2UTP3
C8orf4ENSG00000176907.32891.212401417.030501.0287011.519608.99060HepG2XRCC5
C8orf4ENSG00000176907.3200.467001169.73930-2.5448023.6774021.66140HepG2XRN2
C8orf4ENSG00000176907.3845.094302471.05790-1.5479055.6078053.42730HepG2ZC3H8
C8orf4ENSG00000176907.30.9588011.82540-3.624502.310001.56940K562MTPAP
C8orf4ENSG00000176907.30.4454013.13990-4.882603.330902.51870K562NSUN2
C8orf4ENSG00000176907.30.0000013.28230-99999.999994.124903.00550K562SRPK2
C8orf4ENSG00000176907.30.5008013.93250-4.797903.783602.95610K562UPF1
C8orf4ENSG00000176907.30.0000011.92170-99999.999993.674702.66620K562WDR3
C8orf4ENSG00000176907.30.5156012.39640-4.587503.254802.34460K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for C8orf4 is not available on ENCORE database.






No RBPs affect the alternative splcing events of C8orf4 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for C8orf4 is not avaliable on ENCORE database.