C7orf43

General Information

Gene Name       : C7orf43
Gene ID             : ENSG00000146826.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: C7orf43)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878C7orf43ENSG00000146826.164.727.346.03ENCSR000AEF
HepG2C7orf43ENSG00000146826.169.326.507.91ENCSR985KAT
K562C7orf43ENSG00000146826.1621.1613.8117.48ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for C7orf43 is not avaliable on ENCORE database.



Proteins bound to RNA
  • C7orf43 RNA is bound by 12 proteins.  







eCLIP assay for C7orf43 is not avaliable on ENCORE database.





12 proteins are bound to C7orf43 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr79975341199753461-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.891226.01989HepG2PRPF8
chr79975307599753163-3'-UTR,CDS,intron-Distal,intron-Proximal3.646218.10412K562PRPF8
chr79975307399753138-3'-UTR,CDS,intron-Distal,intron-Proximal4.8434210.44900K562SF3B4
chr79975325999753321-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.9643511.80896HepG2PRPF8
chr79975342099753468-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.442344.98672K562AQR
chr79975547199755510-5'-UTR,CDS,intron-Distal,intron-Proximal4.723455.27053HepG2PPIG
chr79975535299755400-5'-UTR,CDS,intron-Distal,intron-Proximal3.474714.07440K562PRPF8
chr79975555899755621-5'-UTR,CDS,intron-Distal,intron-Proximal5.250927.73335K562SMNDC1
chr79975458999754679-5'-UTR,CDS,intron-Distal,intron-Proximal4.795858.79061HepG2EFTUD2
chr79975499899755031-5'-UTR,CDS,intron-Distal3.543453.59112HepG2PPIG
chr79975557299755617-5'-UTR,intron-Distal,intron-Proximal4.870984.32536HepG2SF3B4
chr79975534699755383-5'-UTR,CDS,intron-Distal,intron-Proximal3.354963.32039HepG2PPIG
chr79975553799755616-5'-UTR,CDS,intron-Distal,intron-Proximal5.0954317.60406K562SF3B4
chr79975525799755317-5'-UTR,CDS,intron-Distal4.076436.36347HepG2PPIG
chr79975618599756326-5'-UTR,CDS,intron-Distal,intron-Proximal5.2658910.57527HepG2NCBP2
chr79975506199755078-5'-UTR,CDS,intron-Distal,intron-Proximal4.077363.49905HepG2PPIG
chr79975562799755712-5'-UTR,intron-Distal,intron-Proximal3.878373.40087HepG2RBFOX2
chr79975467699754724-5'-UTR,CDS,intron-Distal,intron-Proximal3.033654.71929HepG2PRPF8
chr79975563099755681-5'-UTR,intron-Distal,intron-Proximal3.910295.93840HepG2PRPF8
chr79975470899754749-5'-UTR,CDS,intron-Distal,intron-Proximal3.824265.52342HepG2PPIG
chr79975459299754635-5'-UTR,CDS,intron-Distal,intron-Proximal3.818085.64484HepG2PRPF8
chr79975563599755697-5'-UTR,intron-Distal,intron-Proximal4.685547.03763K562EFTUD2
chr79975562499755695-5'-UTR,intron-Distal,intron-Proximal4.835786.92814HepG2SF3B4
chr79975571899755777-CDS,intron-Distal,intron-Proximal3.637957.67169K562SF3B4
chr79975589499755972-CDS,intron-Distal3.501474.88781HepG2XRN2
chr79975572799755787-CDS,intron-Distal,intron-Proximal3.230016.40067K562PRPF8
chr79975572999755782-CDS,intron-Distal,intron-Proximal3.267723.48391K562SMNDC1
chr79975600799756079-CDS,intron-Distal3.585655.04221K562XRN2
chr79975570899755796-CDS,intron-Distal,intron-Proximal3.186413.91530HepG2PRPF4
chr79975590699755975-CDS,intron-Distal4.151555.26179K562XRN2
chr79975463399754689-intron-Distal,intron-Proximal3.758534.29246HepG2SF3B4
chr79975484799754903-intron-Distal,intron-Proximal5.851839.67979K562EFTUD2
chr79975483799754898-intron-Distal,intron-Proximal4.155404.48843K562TIA1
chr79975509799755126-intron-Distal,intron-Proximal4.808094.24111K562EFTUD2
chr79975388299753950-intron-Distal,intron-Proximal4.735734.37194HepG2BUD13
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for C7orf43 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for C7orf43 is not available on ENCORE database.

  • 126 RBPs can affect the levels of C7orf43.  








The Knockdown/knockout RNA-Seq assay for C7orf43 is not available on ENCORE database.





126 RBPs can affect the gene expression of C7orf43 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
C7orf43ENSG00000146826.10463.24860238.571800.957306.551905.17420HepG2ABCF1
C7orf43ENSG00000146826.10364.92850198.729300.876708.932207.96680HepG2ACO1
C7orf43ENSG00000146826.10469.57400125.645901.9019020.2626018.96060HepG2AKAP1
C7orf43ENSG00000146826.10321.88840196.015700.715503.946202.70640HepG2AKAP8
C7orf43ENSG00000146826.10411.89740199.627201.0449012.4784011.00610HepG2AKAP8L
C7orf43ENSG00000146826.10201.58070103.941900.955503.820002.90140HepG2ASCC1
C7orf43ENSG00000146826.10442.57190267.716900.725107.226906.20250HepG2AUH
C7orf43ENSG00000146826.10333.21680162.706201.034103.761702.66890HepG2BCCIP
C7orf43ENSG00000146826.10945.28790194.992102.2772055.9400053.94250HepG2BOP1
C7orf43ENSG00000146826.10266.96260178.674100.579202.648801.44690HepG2BUD13
C7orf43ENSG00000146826.10198.49450122.629600.694703.003702.20190HepG2CALR
C7orf43ENSG00000146826.10228.8781098.758301.212506.699205.52940HepG2CIRBP
C7orf43ENSG00000146826.10340.60300198.643100.777807.072506.09940HepG2CKAP4
C7orf43ENSG00000146826.10426.50450125.668101.7628015.1504013.42540HepG2CNOT7
C7orf43ENSG00000146826.10288.14610196.381700.553002.526701.46960HepG2CPSF7
C7orf43ENSG00000146826.10326.13030176.654300.884407.537106.57340HepG2CELF1
C7orf43ENSG00000146826.10258.61770183.776300.492802.982002.11820HepG2DDX19B
C7orf43ENSG00000146826.10225.61480107.956201.063307.111205.36960HepG2DDX1
C7orf43ENSG00000146826.10275.25310127.734101.107507.855106.77070HepG2DDX21
C7orf43ENSG00000146826.10586.66470120.317302.2856035.2137033.26320HepG2DDX3X
C7orf43ENSG00000146826.10430.68360159.978901.4286011.9565010.48470HepG2DDX55
C7orf43ENSG00000146826.10305.65740190.119000.684904.653403.81560HepG2DKC1
C7orf43ENSG00000146826.10199.63710105.855900.915205.529604.56460HepG2DNAJC21
C7orf43ENSG00000146826.10172.39580104.927300.716202.894702.23020HepG2DNAJC2
C7orf43ENSG00000146826.10235.19670121.483900.953004.553703.39590HepG2EEF2
C7orf43ENSG00000146826.10359.1381099.354701.8538014.8367013.53260HepG2EIF2S1
C7orf43ENSG00000146826.10221.4672098.592601.167403.680702.64590HepG2EIF3D
C7orf43ENSG00000146826.10377.94150109.751201.7838017.7888016.18000HepG2EIF4A3
C7orf43ENSG00000146826.10488.69440106.948602.1919024.0478022.17970HepG2EIF4B
C7orf43ENSG00000146826.10532.99640307.371900.794009.108308.12270HepG2ETF1
C7orf43ENSG00000146826.10349.15430194.155800.846506.700605.40450HepG2EWSR1
C7orf43ENSG00000146826.10587.99570240.882101.287406.056404.95970HepG2FIP1L1
C7orf43ENSG00000146826.10202.25920104.747800.949204.371202.98510HepG2FUS
C7orf43ENSG00000146826.10298.60590110.877701.4292011.3767010.07040HepG2FXR1
C7orf43ENSG00000146826.10669.50240102.779902.7034027.5463025.53440HepG2G3BP1
C7orf43ENSG00000146826.10213.51740109.212600.967103.717802.67580HepG2G3BP2
C7orf43ENSG00000146826.10168.4064087.776500.939904.155203.04640HepG2GEMIN5
C7orf43ENSG00000146826.10208.99770127.278400.715403.121802.03920HepG2GNB2L1
C7orf43ENSG00000146826.10580.58950202.901201.5166010.328209.14540HepG2GPKOW
C7orf43ENSG00000146826.10289.01160189.703500.607304.215303.02700HepG2HDGF
C7orf43ENSG00000146826.10189.64460106.351400.834403.558101.99060HepG2HNRNPA0
C7orf43ENSG00000146826.10316.36980106.870101.5657014.9223013.61580HepG2HNRNPA1
C7orf43ENSG00000146826.10283.38500174.577200.698804.495803.35530HepG2HNRNPA2B1
C7orf43ENSG00000146826.10222.58200118.875200.904804.630203.74820HepG2HNRNPC
C7orf43ENSG00000146826.10185.36940104.250000.830302.679201.99090HepG2HNRNPK
C7orf43ENSG00000146826.10732.18110193.633901.9188033.1099031.31150HepG2HNRNPLL
C7orf43ENSG00000146826.10267.64250166.148000.687703.617202.54030HepG2HNRNPM
C7orf43ENSG00000146826.10212.27970118.089200.846005.445404.61660HepG2HNRNPU
C7orf43ENSG00000146826.10338.65340213.355700.666403.245601.91030HepG2HSPD1
C7orf43ENSG00000146826.10519.40610104.446702.3140035.2090033.11200HepG2IGF2BP2
C7orf43ENSG00000146826.10534.8737098.126802.446404.688503.41620HepG2IGF2BP3
C7orf43ENSG00000146826.10227.28060120.623800.913906.760605.66540HepG2ILF2
C7orf43ENSG00000146826.10225.79000119.830800.913904.736303.12080HepG2KHDRBS1
C7orf43ENSG00000146826.10210.86940105.105701.004404.378003.08880HepG2KHSRP
C7orf43ENSG00000146826.10555.60570228.949101.2789012.1971010.46480HepG2LARP4
C7orf43ENSG00000146826.10255.20300124.704601.033006.679204.95250HepG2LARP7
C7orf43ENSG00000146826.10408.79970110.917101.8818017.1424015.58470HepG2MAGOH
C7orf43ENSG00000146826.10341.15760111.514501.6131013.5932012.26980HepG2MATR3
C7orf43ENSG00000146826.10263.20080103.168201.351105.236403.82070HepG2METAP2
C7orf43ENSG00000146826.10372.94240194.874300.936307.233605.98360HepG2MSI2
C7orf43ENSG00000146826.10534.59030114.122402.2278031.6513029.69860HepG2NCBP2
C7orf43ENSG00000146826.10335.32050188.373900.831806.648905.47220HepG2NOL12
C7orf43ENSG00000146826.10280.40890146.927200.932303.620702.36020HepG2NONO
C7orf43ENSG00000146826.10279.16930159.529100.807204.984802.86420HepG2NUP35
C7orf43ENSG00000146826.10222.12730114.887800.951104.026102.94230HepG2PABPC1
C7orf43ENSG00000146826.10378.34670101.546301.8975021.4477019.48890HepG2PABPC4
C7orf43ENSG00000146826.10223.15330116.885500.932806.242905.04890HepG2PARN
C7orf43ENSG00000146826.10252.76460112.321301.170108.402407.43890HepG2PCBP1
C7orf43ENSG00000146826.10196.6124099.148100.987604.664103.34240HepG2PCBP2
C7orf43ENSG00000146826.10240.21160123.384400.961004.867603.82920HepG2PRPF8
C7orf43ENSG00000146826.10262.76500142.277800.885003.205501.30350HepG2PSIP1
C7orf43ENSG00000146826.10404.64990114.284501.8239027.7651026.38400HepG2PTBP1
C7orf43ENSG00000146826.10250.26120179.812500.476801.965101.45120HepG2PUF60
C7orf43ENSG00000146826.10474.84390190.870901.3148022.1604020.81170HepG2PUM1
C7orf43ENSG00000146826.10520.87950190.736501.449309.339008.14430HepG2PUM2
C7orf43ENSG00000146826.10500.46430202.412401.3059021.8553020.42700HepG2PUS1
C7orf43ENSG00000146826.10253.19600123.787001.032306.910905.98890HepG2QKI
C7orf43ENSG00000146826.10645.32780256.906601.3287013.1663012.20380HepG2RBM22
C7orf43ENSG00000146826.10294.63070112.339301.3909012.4896011.12040HepG2RBM25
C7orf43ENSG00000146826.10270.15470150.375100.845104.439303.16430HepG2RBM27
C7orf43ENSG00000146826.10236.46770122.111400.953304.473603.12170HepG2RCC2
C7orf43ENSG00000146826.10450.28990127.193201.8237027.3414026.00230HepG2NELFE
C7orf43ENSG00000146826.10233.26510118.453300.977606.288805.41240HepG2RECQL
C7orf43ENSG00000146826.10334.4654095.960001.8013019.6039018.19330HepG2RPS19
C7orf43ENSG00000146826.10378.50930138.682901.4484013.7339012.04920HepG2RPS2
C7orf43ENSG00000146826.10203.76930126.273200.690302.674901.88770HepG2RPS3A
C7orf43ENSG00000146826.10291.27420141.568201.040806.806605.12920HepG2RPS5
C7orf43ENSG00000146826.10194.89730122.050100.675102.345501.61530HepG2RRP9
C7orf43ENSG00000146826.10253.2998096.271201.395609.852508.11640HepG2SERBP1
C7orf43ENSG00000146826.10576.72870266.617901.1130010.197408.83720HepG2SF3A3
C7orf43ENSG00000146826.10281.21720118.996701.2407010.595909.55530HepG2SF3B4
C7orf43ENSG00000146826.10283.22700105.396801.426004.050502.23760HepG2SFPQ
C7orf43ENSG00000146826.10282.43720122.635101.203507.373606.40150HepG2SMN1
C7orf43ENSG00000146826.10240.1206097.700001.297208.616206.88200HepG2SMNDC1
C7orf43ENSG00000146826.10657.94820290.167701.1810021.4146020.36380HepG2SRFBP1
C7orf43ENSG00000146826.10329.44380124.202001.4072014.6066013.70280HepG2SRSF1
C7orf43ENSG00000146826.10372.43110177.529101.0688011.6224010.46350HepG2SRSF5
C7orf43ENSG00000146826.10330.41650251.177100.395502.107801.49070HepG2SRSF7
C7orf43ENSG00000146826.10181.93760101.040800.848404.710604.02670HepG2SRSF9
C7orf43ENSG00000146826.10383.93210251.936100.607705.015004.36420HepG2SSB
C7orf43ENSG00000146826.10483.99340201.907701.2612019.1624017.76080HepG2SUCLG1
C7orf43ENSG00000146826.10588.39290159.248901.8854022.6348021.03860HepG2SUPV3L1
C7orf43ENSG00000146826.10318.47610188.778800.754404.605603.70180HepG2TARDBP
C7orf43ENSG00000146826.10277.17680106.734301.376709.939908.28110HepG2TFIP11
C7orf43ENSG00000146826.10185.52770102.581700.854804.426903.37700HepG2TIA1
C7orf43ENSG00000146826.10439.47050114.738001.9373030.8038029.46220HepG2TIAL1
C7orf43ENSG00000146826.10172.65990115.771900.576502.529001.98510HepG2TRIM56
C7orf43ENSG00000146826.10389.19770175.656201.1476011.213409.25380HepG2TUFM
C7orf43ENSG00000146826.10433.31470206.013501.072608.556007.44670HepG2U2AF1
C7orf43ENSG00000146826.10240.34410112.733401.092102.598301.64340HepG2U2AF2
C7orf43ENSG00000146826.10453.94380185.920701.2877010.477908.81290HepG2UBE2L3
C7orf43ENSG00000146826.10193.5636094.068001.040905.647704.55470HepG2UCHL5
C7orf43ENSG00000146826.10349.97790145.803101.263107.690305.96380HepG2UPF2
C7orf43ENSG00000146826.10256.18150105.218801.283708.195506.46810HepG2XRCC6
C7orf43ENSG00000146826.10246.67350156.763300.653902.529701.83430HepG2XRN2
C7orf43ENSG00000146826.10251.20130146.255500.780305.395804.50790HepG2ZC3H8
C7orf43ENSG00000146826.10691.69850260.049001.4113027.3580026.09120HepG2ZNF622
C7orf43ENSG00000146826.101120.95200615.988800.8636011.025609.96850K562AQR
C7orf43ENSG00000146826.10699.13210887.18410-0.343702.355301.45720K562CELF1
C7orf43ENSG00000146826.10719.42740563.822700.351503.030002.35140K562DDX47
C7orf43ENSG00000146826.10596.78520282.699201.077809.338907.56570K562EFTUD2
C7orf43ENSG00000146826.10271.85830184.927600.555803.194102.34080K562EIF3G
C7orf43ENSG00000146826.10424.05070276.233700.618202.294601.54520K562EIF4A3
C7orf43ENSG00000146826.10426.18430287.268900.569004.297003.56670K562FXR1
C7orf43ENSG00000146826.1044.37900128.62340-1.535203.726602.87920K562G3BP2
C7orf43ENSG00000146826.10393.18700276.417400.508302.339201.60810K562GPKOW
C7orf43ENSG00000146826.10365.72210229.791700.670302.882201.82910K562IGF2BP2
C7orf43ENSG00000146826.10514.75740315.504300.706104.832602.72240K562NUSAP1
C7orf43ENSG00000146826.10672.14390462.040600.540702.669701.45980K562PABPC1
C7orf43ENSG00000146826.10455.65390312.843200.542403.640201.97730K562PHF6
C7orf43ENSG00000146826.10469.33520275.102300.770605.313204.27330K562PRPF8
C7orf43ENSG00000146826.10554.12790287.299300.947609.557707.66250K562PSIP1
C7orf43ENSG00000146826.10430.19770234.499100.875308.838107.69260K562PTBP1
C7orf43ENSG00000146826.101053.56490820.555900.360503.708902.59440K562PUM2
C7orf43ENSG00000146826.10627.46240485.329400.370502.217001.71990K562PUS1
C7orf43ENSG00000146826.10371.55610224.774300.725005.375204.15800K562RBM22
C7orf43ENSG00000146826.10364.75750262.134300.476502.644801.67700K562RCC2
C7orf43ENSG00000146826.10649.00800344.553600.913402.999701.61770K562SFPQ
C7orf43ENSG00000146826.10380.43240248.495200.614303.840302.57100K562SRFBP1
C7orf43ENSG00000146826.10397.64360229.904300.790306.401805.33740K562SRSF1
C7orf43ENSG00000146826.10245.67040152.004600.692503.275002.11300K562SRSF4
C7orf43ENSG00000146826.10323.59360217.169100.575303.309802.14250K562SRSF5
C7orf43ENSG00000146826.10551.40610232.641601.244907.232406.03040K562TARDBP
C7orf43ENSG00000146826.10325.95900220.307800.565102.523001.48930K562TRA2A
C7orf43ENSG00000146826.10429.93990535.29870-0.316202.270501.49700K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for C7orf43 is not available on ENCORE database.





9 RBPs can affect the splicing of C7orf43 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEC7orf43ENSG00000146826.10chr7-997544679975461599754256997543399975471699754762-0.084000.003750.03670excludedK562AQR
A3SSC7orf43ENSG00000146826.10chr7-9975329399753542997532939975344899754008997541720.297000.000110.01426longerK562AGGF1
A3SSC7orf43ENSG00000146826.10chr7-9975329399753542997532939975344899754008997541720.232000.001180.08940longerK562AKAP8L
A3SSC7orf43ENSG00000146826.10chr7-9975525599755408997552559975538599755465997555610.152000.000230.02533longerHepG2RBM22
A3SSC7orf43ENSG00000146826.10chr7-9975329399753554997532939975344899754008997541950.301000.000000.00000longerK562AQR
A3SSC7orf43ENSG00000146826.10chr7-9975446799754644997544679975461599754716997549110.142000.001900.01229longerK562AQR
A3SSC7orf43ENSG00000146826.10chr7-9975471699754911997547169975483799754995997550820.098000.000180.00151longerK562AQR
A3SSC7orf43ENSG00000146826.10chr7-997554659975562299755465997555619975571199756308-0.116000.000540.00398shorterK562AQR
A3SSC7orf43ENSG00000146826.10chr7-9975329399753554997532939975344899754008997541630.439000.000000.00000longerK562PUS1
A3SSC7orf43ENSG00000146826.10chr7-9975329399753542997532939975344899754008997541720.251000.000090.01874longerK562UTP18
A3SSC7orf43ENSG00000146826.10chr7-9975329399753542997532939975344899754008997541720.277000.000040.00735longerK562RBM15
A5SSC7orf43ENSG00000146826.10chr7-9975491599755082997549959975508299754716997548370.246000.000000.00000longerK562PUS1
A5SSC7orf43ENSG00000146826.10chr7-9975491599755082997549959975508299754716997548370.145000.000000.00017longerK562AGGF1
A5SSC7orf43ENSG00000146826.10chr7-9975491599755082997549959975508299754716997548370.121000.000000.00068longerK562RBM15
A5SSC7orf43ENSG00000146826.10chr7-997549159975508299754995997550829975471699754837-0.123000.000830.06641shorterK562FXR1
A5SSC7orf43ENSG00000146826.10chr7-9975491599755082997549959975508299754716997548370.165000.000000.00003longerK562UTP18
A5SSC7orf43ENSG00000146826.10chr7-9975491599755082997549959975508299754716997548370.215000.000000.00001longerK562AKAP8L
RIC7orf43ENSG00000146826.10chr7-9975412299754339997541229975417299754256997543390.384000.000000.00000includedK562AQR
MXEC7orf43ENSG00000146826.10chr7-99754008997541959975425699754339997532939975344899754716997548370.365000.000010.000161includedK562AQR
MXEC7orf43ENSG00000146826.10chr7-9975329399753448997540089975417299752884997530789975425699754339-0.257000.001440.035342includedK562TARDBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for C7orf43 is not avaliable on ENCORE database.