C19orf10

General Information

Gene Name       : C19orf10
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: C19orf10)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for C19orf10 is not avaliable on ENCORE database.



Proteins bound to RNA
  • C19orf10 RNA is bound by 24 proteins.  







eCLIP assay for C19orf10 is not avaliable on ENCORE database.





24 proteins are bound to C19orf10 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1946578884657922-3'-UTR,intron-Distal4.8337426.65884HepG2LARP4
chr1946579604657983-3'-UTR,intron-Distal4.639066.49490HepG2AKAP1
chr1946580004658067-3'-UTR,CDS,intron-Distal3.6834710.48658HepG2SND1
chr1946576054657662-3'-UTR,intron-Distal3.754817.19520HepG2AKAP1
chr1946580134658051-3'-UTR,CDS,intron-Distal3.202954.58595K562SND1
chr1946578384657888-3'-UTR,intron-Distal4.0649727.36943HepG2LARP4
chr1946577104657799-3'-UTR,intron-Distal3.6562713.63663K562UPF1
chr1946578634657915-3'-UTR,intron-Distal3.185806.33786K562PABPC4
chr1946579554657988-3'-UTR,intron-Distal4.141605.37920K562PABPC4
chr1946578024657884-3'-UTR,intron-Distal4.7941525.50668HepG2GRSF1
chr1946578134657909-3'-UTR,intron-Distal3.156785.10289HepG2TIAL1
chr1946577494657810-3'-UTR,intron-Distal3.9356619.05450HepG2LARP4
chr1946575994657702-3'-UTR,intron-Distal4.8292124.73151K562UPF1
chr1946577204657809-3'-UTR,intron-Distal6.2417134.26729HepG2UPF1
chr1946578054657907-3'-UTR,intron-Distal3.0767410.74958K562UPF1
chr1946578064657889-3'-UTR,intron-Distal3.883756.59253K562LARP4
chr1946578094657921-3'-UTR,intron-Distal5.2680236.63261HepG2UPF1
chr1946578194657922-3'-UTR,intron-Distal6.6822728.47449HepG2AKAP1
chr1946576124657650-3'-UTR,intron-Distal3.072424.94039K562YBX3
chr1946580064658054-3'-UTR,CDS,intron-Distal3.0238111.71110HepG2LARP4
chr1946576704657731-3'-UTR,intron-Distal4.231494.90523HepG2AKAP1
chr1946576114657645-3'-UTR,intron-Distal4.9884414.40315HepG2LARP4
chr1946576774657720-3'-UTR,intron-Distal4.727758.55060HepG2UPF1
chr1946579454658006-3'-UTR,intron-Distal4.1911922.76685HepG2LARP4
chr1946579594658020-3'-UTR,intron-Distal6.8392814.97323HepG2RPS3
chr1946577444657819-3'-UTR,intron-Distal5.3550015.57311HepG2AKAP1
chr1946702284670368-5'-UTR,CDS,intron-Distal3.9780216.51542K562DDX3X
chr1946648924664947-CDS,intron-Distal,intron-Proximal3.6880914.46763HepG2RPS3
chr1946606794660717-CDS,intron-Distal,intron-Proximal3.853644.84058HepG2LIN28B
chr1946607394660763-CDS,intron-Distal,intron-Proximal5.343439.57345K562SND1
chr1946600014660015-CDS,intron-Distal3.514833.94213HepG2LIN28B
chr1946648864664911-CDS,intron-Distal,intron-Proximal4.3302217.13486HepG2SND1
chr1946702124670255-CDS,intron-Distal4.9780122.29932K562RPS3
chr1946607024660733-CDS,intron-Distal3.638229.94881HepG2LARP4
chr1946685654668632-CDS,intron-Distal,intron-Proximal3.870157.16374K562AQR
chr1946606794660689-CDS,intron-Distal,intron-Proximal3.099343.58206K562LIN28B
chr1946580754658097-CDS,intron-Distal4.7446610.40311HepG2SND1
chr1946686064668646-CDS,intron-Distal,intron-Proximal3.674689.19467HepG2LARP4
chr1946580624658095-CDS,intron-Distal3.010308.71602HepG2LARP4
chr1946606804660730-CDS,intron-Distal,intron-Proximal3.8904017.23607HepG2SND1
chr1946599424659974-CDS,intron-Distal,intron-Proximal4.171456.77664K562SND1
chr1946701734670240-CDS,intron-Distal5.1341526.26790HepG2RPS3
chr1946702284670345-CDS,intron-Distal4.4473781.45167HepG2DDX3X
chr1946599424660016-CDS,intron-Distal,intron-Proximal3.612447.27285HepG2G3BP1
chr1946606804660729-CDS,intron-Distal,intron-Proximal3.239735.23342HepG2G3BP1
chr1946648254664903-CDS,intron-Distal,intron-Proximal3.954758.17589HepG2PRPF8
chr1946701704670228-CDS,intron-Distal3.3627714.07851K562DDX3X
chr1946701874670228-CDS,intron-Distal3.6287319.05205HepG2DDX3X
chr1946648874664948-CDS,intron-Distal,intron-Proximal4.0671613.14797K562SND1
chr1946599944660016-CDS,intron-Distal,intron-Proximal4.099344.23668K562LIN28B
chr1946702404670323-CDS,intron-Distal4.7271833.39898HepG2RPS3
chr1946607334660777-CDS,intron-Distal,intron-Proximal3.341503.75245K562BUD13
chr1946702914670319-CDS,intron-Distal3.390995.38767K562RPS3
chr1946648344664895-CDS,intron-Distal,intron-Proximal3.926426.80869K562AQR
chr1946599434659955-CDS,intron-Distal5.228555.67454HepG2RPS3
chr1946702364670318-CDS,intron-Distal4.583675.98323K562DROSHA
chr1946599484660005-CDS,intron-Distal3.867993.08171K562APOBEC3C
chr1946580654658096-CDS,intron-Distal4.224917.36912K562SND1
chr1946599424659953-CDS,intron-Distal,intron-Proximal4.931865.24633HepG2SND1
chr1946686064668640-CDS,intron-Distal,intron-Proximal4.269525.33371HepG2DDX55
chr1946599424659961-CDS,intron-Distal,intron-Proximal3.656038.88471HepG2LARP4
chr1946607304660763-CDS,intron-Distal,intron-Proximal4.0723414.05458HepG2SND1
chr1946702194670285-CDS,intron-Distal3.980745.72235K562GEMIN5
chr1946606804660739-CDS,intron-Distal,intron-Proximal4.1662314.63062K562SND1
chr1946627784662944-intron-Distal5.414867.63549K562GTF2F1
chr1946629984663082-intron-Distal4.957168.10881HepG2FAM120A
chr1946628864662973-intron-Distal5.044876.92491HepG2FAM120A
chr1946628944662995-intron-Distal4.606836.06839HepG2PRPF4
chr1946700494670114-intron-Distal3.268383.94787K562AQR
chr1946627664662881-intron-Distal5.453725.36159K562DHX30
chr1946701144670173-intron-Distal4.681374.09264K562AQR
chr1946646044664692-intron-Distal4.002643.11728K562FAM120A
chr1946627654662836-intron-Distal4.170203.84437HepG2PRPF4
chr1946646884664752-intron-Distal3.151933.92899HepG2PRPF4
chr1946625644662636-intron-Distal3.432454.35339HepG2CSTF2T
chr1946627814662858-intron-Distal3.620745.16644HepG2FAM120A
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for C19orf10 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for C19orf10 is not available on ENCORE database.

  • 123 RBPs can affect the levels of C19orf10.  








The Knockdown/knockout RNA-Seq assay for C19orf10 is not available on ENCORE database.





123 RBPs can affect the gene expression of C19orf10 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
C19orf10ENSG00000074842.3683.804301202.73270-0.814708.401406.88710HepG2ABCF1
C19orf10ENSG00000074842.32107.150601494.844200.4952011.0983010.05130HepG2ACO1
C19orf10ENSG00000074842.3544.57410939.45490-0.786708.902407.24040HepG2ADAR
C19orf10ENSG00000074842.33594.469502224.973100.691907.597706.76170HepG2AKAP1
C19orf10ENSG00000074842.31052.999301501.83520-0.512208.827007.55370HepG2AKAP8L
C19orf10ENSG00000074842.31485.317501840.93020-0.309702.065201.38280HepG2ASCC1
C19orf10ENSG00000074842.32584.767801778.589900.539208.559207.46330HepG2AUH
C19orf10ENSG00000074842.3855.57350579.120900.562904.983404.21140HepG2BOP1
C19orf10ENSG00000074842.3928.10720677.389100.454204.352903.41010HepG2CALR
C19orf10ENSG00000074842.3898.824201389.18980-0.628104.897703.58820HepG2CCAR1
C19orf10ENSG00000074842.31360.528701749.02600-0.362402.709601.94500HepG2CIRBP
C19orf10ENSG00000074842.31242.982901494.48060-0.265803.403302.67940HepG2CKAP4
C19orf10ENSG00000074842.31481.950501063.925900.478002.505501.78040HepG2CNOT7
C19orf10ENSG00000074842.3968.64990531.639900.865405.119604.20960HepG2CPSF6
C19orf10ENSG00000074842.31472.17440990.376000.571806.966305.28590HepG2CPSF7
C19orf10ENSG00000074842.3548.20020724.85810-0.403002.793401.71230HepG2CSTF2
C19orf10ENSG00000074842.32845.078401736.418300.7123020.1905018.77840HepG2CELF1
C19orf10ENSG00000074842.32698.703501866.829000.5316011.3621010.02220HepG2DAZAP1
C19orf10ENSG00000074842.3926.112701382.49890-0.5780012.4928010.98830HepG2DDX19B
C19orf10ENSG00000074842.31247.14780964.722200.370304.056502.67520HepG2DDX1
C19orf10ENSG00000074842.3706.662201047.31590-0.567605.906504.95710HepG2DDX21
C19orf10ENSG00000074842.3433.940501024.74270-1.2397024.6863022.28490HepG2DDX24
C19orf10ENSG00000074842.31715.857901153.935800.572304.582403.61420HepG2DDX55
C19orf10ENSG00000074842.33476.304601831.033900.9248012.9484011.73230HepG2DDX6
C19orf10ENSG00000074842.3780.849001430.15080-0.8731021.3674019.90480HepG2DKC1
C19orf10ENSG00000074842.31120.15450824.130900.442703.487802.23620HepG2EFTUD2
C19orf10ENSG00000074842.33002.789001759.975100.7706010.641109.52510HepG2EIF2S1
C19orf10ENSG00000074842.3505.89750988.92970-0.9670016.4744014.30080HepG2EIF3G
C19orf10ENSG00000074842.31273.465801841.95420-0.532507.089805.86070HepG2EIF4G1
C19orf10ENSG00000074842.32198.643901764.436000.317302.680601.87850HepG2EIF4G2
C19orf10ENSG00000074842.3599.642901041.80620-0.796909.894908.03220HepG2ESF1
C19orf10ENSG00000074842.31401.446202042.06200-0.5431011.7124010.61630HepG2ETF1
C19orf10ENSG00000074842.3918.48220717.260000.356703.001701.77740HepG2FAM120A
C19orf10ENSG00000074842.31603.588001962.63900-0.291501.902201.32350HepG2FXR1
C19orf10ENSG00000074842.31249.100901820.44890-0.543404.907704.03300HepG2G3BP1
C19orf10ENSG00000074842.31193.383501932.88360-0.695708.513806.93610HepG2G3BP2
C19orf10ENSG00000074842.3392.86520714.53160-0.863009.321307.72590HepG2GEMIN5
C19orf10ENSG00000074842.3472.62990955.00930-1.0148014.6679013.37190HepG2HNRNPA1
C19orf10ENSG00000074842.32356.199001715.788400.457509.003507.49660HepG2HNRNPA2B1
C19orf10ENSG00000074842.32326.702701843.804900.335502.768902.07110HepG2HNRNPK
C19orf10ENSG00000074842.32050.690301700.463400.270102.994202.29600HepG2HNRNPL
C19orf10ENSG00000074842.3829.14410575.066900.527803.770403.04550HepG2HNRNPLL
C19orf10ENSG00000074842.3766.840201055.27590-0.460603.549102.87080HepG2HNRNPU
C19orf10ENSG00000074842.31277.121401850.38020-0.534905.113104.22050HepG2IGF2BP2
C19orf10ENSG00000074842.31256.130101077.924200.220602.339501.65790HepG2ILF2
C19orf10ENSG00000074842.31574.085601080.119200.543205.720504.10660HepG2LARP7
C19orf10ENSG00000074842.31533.211501974.25660-0.364802.415001.82320HepG2MATR3
C19orf10ENSG00000074842.31327.474002020.71450-0.606206.085405.16240HepG2NCBP2
C19orf10ENSG00000074842.31631.293401098.985500.569703.931202.22800HepG2NKRF
C19orf10ENSG00000074842.32239.930701851.157000.274903.099402.29300HepG2NOL12
C19orf10ENSG00000074842.32238.79750972.529001.2028011.566509.72200HepG2PABPC1
C19orf10ENSG00000074842.31377.610701044.504800.399203.229502.32130HepG2PARN
C19orf10ENSG00000074842.3531.85400782.59470-0.557206.838605.68550HepG2PRPF4
C19orf10ENSG00000074842.3542.506501032.10670-0.927907.583405.65730HepG2PRPF6
C19orf10ENSG00000074842.3556.56530890.02090-0.677306.269005.10630HepG2PRPF8
C19orf10ENSG00000074842.31325.321101785.63900-0.430106.881106.09570HepG2PTBP1
C19orf10ENSG00000074842.31249.053901767.15980-0.500603.968803.26920HepG2PUF60
C19orf10ENSG00000074842.32260.942501874.578100.270302.863602.18190HepG2PUM2
C19orf10ENSG00000074842.3977.940201522.59010-0.6387014.6431013.42360HepG2PUS1
C19orf10ENSG00000074842.31473.197601933.80750-0.392504.864104.07110HepG2QKI
C19orf10ENSG00000074842.31293.30320947.285100.449101.959301.35610HepG2RAVER1
C19orf10ENSG00000074842.31331.124601706.78540-0.358604.430103.81460HepG2RBM22
C19orf10ENSG00000074842.3599.939401057.67730-0.818008.380306.54500HepG2RCC2
C19orf10ENSG00000074842.3695.350901987.21220-1.5149064.4711062.69890HepG2NELFE
C19orf10ENSG00000074842.3888.146401850.87720-1.0593034.8409033.12370HepG2RECQL
C19orf10ENSG00000074842.3887.735501430.20110-0.688008.872907.75680HepG2RPLP0
C19orf10ENSG00000074842.3295.15040780.88950-1.4037025.5673024.01020HepG2RPS19
C19orf10ENSG00000074842.3848.628301201.17410-0.501204.859403.81750HepG2RPS2
C19orf10ENSG00000074842.31499.28990880.400400.767907.851606.60910HepG2RRP9
C19orf10ENSG00000074842.32045.22420939.752101.1218048.0815045.91280HepG2SAFB2
C19orf10ENSG00000074842.3787.26800569.163700.467903.380202.60740HepG2SF3B1
C19orf10ENSG00000074842.31246.752301859.01030-0.5764011.8066010.71940HepG2SF3B4
C19orf10ENSG00000074842.31460.182501095.879800.414007.383006.41000HepG2SMN1
C19orf10ENSG00000074842.31463.50320967.131900.597504.418303.18990HepG2SMNDC1
C19orf10ENSG00000074842.31289.35210633.308401.025603.095702.26900HepG2SNRNP70
C19orf10ENSG00000074842.31060.452701940.43300-0.8717025.9527024.82550HepG2SRSF1
C19orf10ENSG00000074842.31113.937301673.74180-0.5874012.5964011.65830HepG2SSB
C19orf10ENSG00000074842.31502.133601984.35990-0.401707.170506.24960HepG2SUCLG1
C19orf10ENSG00000074842.31633.29530819.974500.9940020.6891018.37960HepG2SUPT6H
C19orf10ENSG00000074842.3736.495901148.68250-0.641205.722604.80420HepG2SUPV3L1
C19orf10ENSG00000074842.3606.609401744.21660-1.5237055.2107053.12660HepG2TAF15
C19orf10ENSG00000074842.3922.11860560.690700.717607.602706.47770HepG2TARDBP
C19orf10ENSG00000074842.31213.28500769.895600.656106.063304.68020HepG2TFIP11
C19orf10ENSG00000074842.3585.765501025.28480-0.8076013.0488012.10090HepG2TIAL1
C19orf10ENSG00000074842.31968.231101034.571300.9278030.7563029.12490HepG2TRIM56
C19orf10ENSG00000074842.3891.08890678.532900.393102.478601.75980HepG2UCHL5
C19orf10ENSG00000074842.31408.113801152.014900.289503.549502.77450HepG2UPF1
C19orf10ENSG00000074842.3853.319901112.22300-0.382304.458003.72680HepG2UTP3
C19orf10ENSG00000074842.3731.731601041.99170-0.510002.964801.86630HepG2XRCC6
C19orf10ENSG00000074842.3767.008401130.75330-0.560005.055604.08360HepG2XRN2
C19orf10ENSG00000074842.31724.321401266.993900.444509.370508.51590HepG2ZNF622
C19orf10ENSG00000074842.3505.23750664.85900-0.396102.591701.45500K562AARS
C19orf10ENSG00000074842.32107.749601432.204400.557408.057807.16000K562AGGF1
C19orf10ENSG00000074842.31353.02640997.943500.439106.236903.92760K562AKAP1
C19orf10ENSG00000074842.32314.138801573.928000.556003.227602.14500K562AKAP8
C19orf10ENSG00000074842.32665.486901490.310900.8387016.5993014.75510K562AKAP8L
C19orf10ENSG00000074842.32277.912701563.765500.542606.420304.95650K562ATP5C1
C19orf10ENSG00000074842.31074.58330874.678700.296902.872301.74150K562CPEB4
C19orf10ENSG00000074842.31121.07180904.918900.308903.247702.55010K562DDX47
C19orf10ENSG00000074842.31326.320701025.310000.371304.433402.65520K562DDX6
C19orf10ENSG00000074842.31183.03230647.136100.870208.758906.56430K562EEF2
C19orf10ENSG00000074842.3790.97700625.276100.339002.123101.32290K562EFTUD2
C19orf10ENSG00000074842.31601.279001094.686400.548609.263208.06490K562EIF2S2
C19orf10ENSG00000074842.3902.51790669.507700.430802.702901.68030K562EIF3D
C19orf10ENSG00000074842.3742.10280571.446900.376903.063602.22670K562EIF3G
C19orf10ENSG00000074842.31497.346901056.560200.502905.596604.43310K562EIF4A3
C19orf10ENSG00000074842.31143.82910922.298100.310502.867801.54970K562EWSR1
C19orf10ENSG00000074842.3540.23980717.73680-0.409903.114001.76480K562EXOSC5
C19orf10ENSG00000074842.3797.44530437.131800.8672010.716208.92500K562FIP1L1
C19orf10ENSG00000074842.3399.43360631.67650-0.661205.157603.53780K562FKBP4
C19orf10ENSG00000074842.3271.05470616.80290-1.186205.431604.36500K562G3BP2
C19orf10ENSG00000074842.3512.66000361.821600.502603.345502.47410K562GPKOW
C19orf10ENSG00000074842.32056.345301458.729900.495306.029004.90760K562GRSF1
C19orf10ENSG00000074842.3510.20430727.36600-0.511604.270403.54520K562HNRNPC
C19orf10ENSG00000074842.3715.42090359.595900.9923010.627708.51920K562HNRNPM
C19orf10ENSG00000074842.31283.10870592.589601.1144019.1788017.22960K562HSPD1
C19orf10ENSG00000074842.31321.92070959.111700.462803.181102.05490K562IGF2BP2
C19orf10ENSG00000074842.32207.273401581.461400.480906.177404.83380K562KIF1C
C19orf10ENSG00000074842.32119.420201513.954000.485206.116704.27590K562MAK16
C19orf10ENSG00000074842.31581.018101241.813000.348302.057801.32020K562NAA15
C19orf10ENSG00000074842.3982.31960651.157600.593103.375101.34960K562PABPC4
C19orf10ENSG00000074842.3693.63580912.95670-0.396402.481301.69400K562PCBP3
C19orf10ENSG00000074842.31096.06360496.301401.1429019.2817016.38600K562PPIG
C19orf10ENSG00000074842.3933.03260608.465000.616705.721704.64160K562PRPF8
C19orf10ENSG00000074842.32325.572501477.712400.654105.717404.97060K562PUS1
C19orf10ENSG00000074842.31882.453501440.029500.386402.161901.62680K562RBM15
C19orf10ENSG00000074842.3724.67980987.49850-0.446403.489902.24250K562NELFE
C19orf10ENSG00000074842.3873.26520619.809200.494503.381902.47720K562RPS19
C19orf10ENSG00000074842.3980.15750622.151000.655604.764103.00970K562RRP9
C19orf10ENSG00000074842.3432.03580623.99140-0.530404.128102.79630K562SAFB
C19orf10ENSG00000074842.3439.11920645.11300-0.554904.283202.44560K562SDAD1
C19orf10ENSG00000074842.31174.23530927.678900.339902.927102.09070K562SF3A3
C19orf10ENSG00000074842.31343.54530906.475000.567605.960104.31590K562SRSF5
C19orf10ENSG00000074842.3591.38760797.03940-0.430504.091202.22780K562SRSF9
C19orf10ENSG00000074842.31200.34730971.115500.305602.006001.39760K562TARDBP
C19orf10ENSG00000074842.3478.97540627.27440-0.389102.144101.33080K562TIAL1
C19orf10ENSG00000074842.3708.32920511.087600.470703.001901.54720K562TRIP6
C19orf10ENSG00000074842.31331.78890996.749900.418001.996201.37920K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for C19orf10 is not available on ENCORE database.





2 RBPs can affect the splicing of C19orf10 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSC19orf10ENSG00000074842.3chr19-4659942466010546599424660015466068046607620.058000.000000.00000longerK562AQR
MXEC19orf10ENSG00000074842.3chr19-466068046607624664887466494946599424660015466860646686570.173000.000110.001231includedHepG2U2AF2
MXEC19orf10ENSG00000074842.3chr19-466488746649494668606466865746606804660762467017246703740.121000.000030.000451includedHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for C19orf10 is not avaliable on ENCORE database.