B3GNT2

General Information

Gene Name       : B3GNT2
Gene ID             : ENSG00000170340.10
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: B3GNT2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878B3GNT2ENSG00000170340.1073.9757.7365.85ENCSR000AEF
HepG2B3GNT2ENSG00000170340.1012.7424.7918.77ENCSR985KAT
K562B3GNT2ENSG00000170340.1018.6921.6520.17ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for B3GNT2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • B3GNT2 RNA is bound by 22 proteins.  







eCLIP assay for B3GNT2 is not avaliable on ENCORE database.





22 proteins are bound to B3GNT2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr26245159062451645+3'-UTR4.683647.98240K562PUM2
chr26245169562451749+3'-UTR3.204394.09016K562DDX6
chr26245121962451256+3'-UTR4.652598.36483HepG2FUBP3
chr26245111162451178+3'-UTR6.2470314.22594HepG2FUBP3
chr26245169562451741+3'-UTR4.9325320.06916HepG2FUBP3
chr26245174462451781+3'-UTR5.8523011.63633HepG2FUBP3
chr26245163862451662+3'-UTR5.3263813.11958HepG2FUBP3
chr26245170362451784+3'-UTR4.593926.47483K562PUM2
chr26245159562451647+3'-UTR4.128394.49052K562DDX6
chr26245169562451772+3'-UTR3.912496.48311HepG2TIAL1
chr26245174262451784+3'-UTR4.025383.28046HepG2ZC3H11A
chr26245159062451638+3'-UTR6.6587936.34501HepG2FUBP3
chr26245160862451662+3'-UTR3.064334.35941K562KHSRP
chr26245125662451295+3'-UTR5.0339012.17920HepG2FUBP3
chr26242326362423299+5'-UTR4.194923.28019K562DDX3X
chr26242332362423408+5'-UTR3.345244.11395HepG2NCBP2
chr26242342962423488+5'-UTR4.7284628.14019HepG2DDX3X
chr26242337562423429+5'-UTR5.9089317.66846HepG2DDX3X
chr26242343062423491+5'-UTR,intron-Proximal4.826433.44458K562DDX3X
chr26242325162423323+5'-UTR4.518645.63689HepG2NCBP2
chr26242335562423488+5'-UTR4.129074.35343K562SRSF1
chr26242326562423370+5'-UTR4.0335417.22645HepG2DDX3X
chr26244948162449555+CDS4.051545.07650HepG2ZNF800
chr26244979462449857+CDS4.398594.15208K562RBM15
chr26244935662449402+CDS3.927915.56491HepG2BCLAF1
chr26244977662449871+CDS3.976755.76695HepG2RBM15
chr26244956762449624+CDS4.192894.55095K562YBX3
chr26244972462449837+CDS3.252723.86052K562YBX3
chr26244942062449485+CDS3.9663211.60362HepG2BCLAF1
chr26244949062449550+CDS3.0162611.57164HepG2BCLAF1
chr26244948762449617+CDS3.910524.46352HepG2UCHL5
chr26245000162450055+CDS4.404145.16052K562RBM15
chr26245023762450304+CDS3.611666.79943K562RBM15
chr26242429962424398+intron-Distal3.393413.95956HepG2NKRF
chr26242372262423789+intron-Distal3.759434.38583HepG2DDX59
chr26242424562424296+intron-Distal3.441523.73797K562CSTF2T
chr26242379662423870+intron-Distal3.976993.65412HepG2HNRNPK
chr26242431362424369+intron-Distal3.475234.14347HepG2XRN2
chr26243532462435421+intron-Distal4.262574.87774HepG2HNRNPK
chr26242445462424493+intron-Distal3.176823.00221HepG2CSTF2T
chr26243935162439441+intron-Distal4.446645.30668HepG2RBFOX2
chr26243533762435410+intron-Distal3.234194.90513HepG2PCBP2
chr26244861562448699+intron-Distal4.778594.55788HepG2QKI
chr26242431162424387+intron-Distal5.317368.08715HepG2CSTF2T
chr26242353062423637+intron-Distal,intron-Proximal5.042629.01744HepG2HNRNPK
chr26242363762423684+intron-Distal3.346033.23466HepG2CSTF2T
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for B3GNT2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for B3GNT2 is not available on ENCORE database.

  • 139 RBPs can affect the levels of B3GNT2.  








The Knockdown/knockout RNA-Seq assay for B3GNT2 is not available on ENCORE database.





139 RBPs can affect the gene expression of B3GNT2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
B3GNT2ENSG00000170340.10467.181601019.97470-1.1265014.3304012.47170HepG2ABCF1
B3GNT2ENSG00000170340.10644.403901022.82310-0.6665012.3018011.21450HepG2ACO1
B3GNT2ENSG00000170340.10467.16810822.85800-0.816709.010907.34360HepG2ADAR
B3GNT2ENSG00000170340.102053.310703283.32710-0.677204.783304.10850HepG2AKAP1
B3GNT2ENSG00000170340.10726.876501486.98540-1.0326010.857108.94220HepG2AKAP8
B3GNT2ENSG00000170340.10251.514901027.65420-2.0306073.2564070.17760HepG2AKAP8L
B3GNT2ENSG00000170340.101565.517502716.79380-0.795306.298005.13610HepG2ASCC1
B3GNT2ENSG00000170340.101120.303301504.79960-0.425704.966104.09020HepG2AUH
B3GNT2ENSG00000170340.10495.01740764.46770-0.627004.215903.05900HepG2BCCIP
B3GNT2ENSG00000170340.10346.60310538.53040-0.635704.971004.19980HepG2BOP1
B3GNT2ENSG00000170340.10412.866001133.05270-1.4565010.581508.70710HepG2CCAR1
B3GNT2ENSG00000170340.10762.220401244.00240-0.706703.867201.57480HepG2CDC40
B3GNT2ENSG00000170340.10809.164402581.10360-1.6735018.0026016.24430HepG2CIRBP
B3GNT2ENSG00000170340.10654.681801022.63160-0.6434012.2030011.00720HepG2CKAP4
B3GNT2ENSG00000170340.10608.702901877.67190-1.6251021.6799019.57910HepG2CNOT7
B3GNT2ENSG00000170340.101061.84430839.861300.338202.424701.39330HepG2CPSF7
B3GNT2ENSG00000170340.10308.79410472.22810-0.612804.208402.91200HepG2CSTF2
B3GNT2ENSG00000170340.10909.514501263.67080-0.474506.765505.84490HepG2CELF1
B3GNT2ENSG00000170340.101147.274201358.91530-0.244203.060902.28770HepG2DAZAP1
B3GNT2ENSG00000170340.10655.83780945.97900-0.528508.416307.10060HepG2DDX19B
B3GNT2ENSG00000170340.10568.96820807.38230-0.504904.362203.52990HepG2DDX21
B3GNT2ENSG00000170340.10435.63720703.28930-0.691004.594502.99050HepG2DDX27
B3GNT2ENSG00000170340.101876.622203145.42850-0.745106.115405.22020HepG2DDX3X
B3GNT2ENSG00000170340.10565.37180789.11610-0.481004.141202.51150HepG2DDX52
B3GNT2ENSG00000170340.10530.32410751.62260-0.503102.914302.12360HepG2DDX55
B3GNT2ENSG00000170340.10807.75550561.417900.524702.236001.36020HepG2DDX59
B3GNT2ENSG00000170340.101312.388702701.40070-1.0415010.715309.59060HepG2DDX6
B3GNT2ENSG00000170340.10549.59140978.57250-0.8323015.3701014.04590HepG2DKC1
B3GNT2ENSG00000170340.10540.25010941.60950-0.801507.947306.46940HepG2EEF2
B3GNT2ENSG00000170340.10438.21500785.06430-0.841207.835405.97360HepG2EFTUD2
B3GNT2ENSG00000170340.10727.731202597.50510-1.8356020.4746018.96000HepG2EIF2S1
B3GNT2ENSG00000170340.10582.14590762.24980-0.388903.027401.90350HepG2EIF3G
B3GNT2ENSG00000170340.10651.627302870.83050-2.1393024.5150022.66260HepG2EIF4A3
B3GNT2ENSG00000170340.101122.035502794.61800-1.3165013.8676012.39450HepG2EIF4B
B3GNT2ENSG00000170340.101360.262501727.60850-0.344903.724603.04470HepG2ETF1
B3GNT2ENSG00000170340.10731.66630999.50830-0.450004.141303.11930HepG2EWSR1
B3GNT2ENSG00000170340.101108.41790722.178800.618005.852503.39390HepG2EXOSC9
B3GNT2ENSG00000170340.10485.43250683.10300-0.492804.238002.76290HepG2FAM120A
B3GNT2ENSG00000170340.10603.74620769.25520-0.349502.441401.36340HepG2FASTKD2
B3GNT2ENSG00000170340.10710.349201546.87430-1.1228017.7509015.85520HepG2FUBP3
B3GNT2ENSG00000170340.101178.855402895.69420-1.2965014.5101013.05460HepG2FXR1
B3GNT2ENSG00000170340.10945.177302686.62990-1.5071016.6476015.08420HepG2G3BP1
B3GNT2ENSG00000170340.101942.374902851.61540-0.554004.372903.24110HepG2G3BP2
B3GNT2ENSG00000170340.10405.75590680.64500-0.746306.742605.34780HepG2GEMIN5
B3GNT2ENSG00000170340.10952.394901738.01300-0.867807.920606.05300HepG2GRSF1
B3GNT2ENSG00000170340.101087.741901586.88370-0.544903.674902.08050HepG2HNRNPA0
B3GNT2ENSG00000170340.10330.40230836.49660-1.3401022.1864020.65900HepG2HNRNPA1
B3GNT2ENSG00000170340.101085.021301549.70620-0.514303.700702.07470HepG2HNRNPAB
B3GNT2ENSG00000170340.10406.48730930.46290-1.1947018.9111017.26560HepG2HNRNPC
B3GNT2ENSG00000170340.102449.700901626.371600.590804.542602.60190HepG2HNRNPD
B3GNT2ENSG00000170340.101030.507902719.40810-1.3999016.6404015.07780HepG2HNRNPK
B3GNT2ENSG00000170340.10971.195501237.91600-0.350105.178304.28030HepG2HNRNPL
B3GNT2ENSG00000170340.10477.76770710.52700-0.572605.504004.21100HepG2HNRNPM
B3GNT2ENSG00000170340.10673.65400924.31010-0.456405.659804.81730HepG2HNRNPU
B3GNT2ENSG00000170340.101078.680501619.64100-0.586403.342001.98620HepG2HSPD1
B3GNT2ENSG00000170340.101251.221302731.06030-1.1261010.793709.55350HepG2IGF2BP2
B3GNT2ENSG00000170340.101141.682402562.33900-1.166306.957905.44020HepG2IGF2BP3
B3GNT2ENSG00000170340.10655.66590944.14960-0.526108.834107.59560HepG2ILF2
B3GNT2ENSG00000170340.101956.875402746.68130-0.489103.311102.20220HepG2KHSRP
B3GNT2ENSG00000170340.101210.66640935.007700.372705.422204.00750HepG2KIF1C
B3GNT2ENSG00000170340.101179.289201618.10990-0.456402.753401.51030HepG2KRR1
B3GNT2ENSG00000170340.10738.137001195.69850-0.695904.201803.17260HepG2LARP4
B3GNT2ENSG00000170340.101610.032702896.70130-0.847307.718406.63780HepG2MAGOH
B3GNT2ENSG00000170340.10753.595802913.05260-1.9507024.2227022.51160HepG2MATR3
B3GNT2ENSG00000170340.10767.15410545.497100.491802.178901.32690HepG2MTPAP
B3GNT2ENSG00000170340.10978.72070699.864500.483704.408402.87340HepG2NAA15
B3GNT2ENSG00000170340.101596.749302981.78420-0.901008.301207.23310HepG2NCBP2
B3GNT2ENSG00000170340.10737.234201534.62620-1.057707.051604.82120HepG2NKRF
B3GNT2ENSG00000170340.10760.767201347.48910-0.8247016.3278014.56420HepG2NOL12
B3GNT2ENSG00000170340.101139.857402468.92170-1.1150029.6001027.97600HepG2PCBP1
B3GNT2ENSG00000170340.10589.76640950.08960-0.687904.681703.35760HepG2PCBP2
B3GNT2ENSG00000170340.10480.57570632.15670-0.395502.849901.60040HepG2PKM
B3GNT2ENSG00000170340.10379.79860579.86010-0.610504.031303.07880HepG2PRPF8
B3GNT2ENSG00000170340.101273.743602512.09950-0.9798024.7961023.46920HepG2PTBP1
B3GNT2ENSG00000170340.10974.986301365.36170-0.485809.718208.74930HepG2PUM1
B3GNT2ENSG00000170340.101708.025901364.396500.324001.947701.37850HepG2PUM2
B3GNT2ENSG00000170340.101975.265402720.92300-0.462006.906905.98510HepG2QKI
B3GNT2ENSG00000170340.101219.549201443.98250-0.243702.024501.56310HepG2RBM22
B3GNT2ENSG00000170340.101539.500902469.31530-0.681608.630207.48900HepG2RBM25
B3GNT2ENSG00000170340.10465.12950937.64850-1.011403.171901.42530HepG2RBM39
B3GNT2ENSG00000170340.10813.063002795.82580-1.7818057.0679055.36270HepG2NELFE
B3GNT2ENSG00000170340.101393.050302603.74990-0.9023023.3428021.85930HepG2RECQL
B3GNT2ENSG00000170340.10413.10320743.77530-0.848409.517808.46000HepG2RPS19
B3GNT2ENSG00000170340.101207.198301884.61940-0.642605.210704.11110HepG2RPS3A
B3GNT2ENSG00000170340.102412.156601774.720900.442603.119901.73110HepG2SART3
B3GNT2ENSG00000170340.10394.39190746.57560-0.9207010.109308.35830HepG2SERBP1
B3GNT2ENSG00000170340.10523.591101031.78560-0.978602.975201.56320HepG2SF1
B3GNT2ENSG00000170340.10813.505402615.63620-1.6849051.6120049.68320HepG2SF3B4
B3GNT2ENSG00000170340.101476.848001233.209100.260002.976202.25100HepG2SLBP
B3GNT2ENSG00000170340.10769.54650959.89380-0.318903.675402.95190HepG2SMN1
B3GNT2ENSG00000170340.10864.853702730.06960-1.6584051.8258050.34820HepG2SRSF1
B3GNT2ENSG00000170340.10949.96880777.742600.288502.356301.71050HepG2SRSF7
B3GNT2ENSG00000170340.101366.173802220.98100-0.7011015.9106014.78220HepG2SRSF9
B3GNT2ENSG00000170340.10401.124801416.12820-1.8198047.0879045.60530HepG2SSB
B3GNT2ENSG00000170340.101120.307901613.09220-0.525903.947302.43550HepG2SSRP1
B3GNT2ENSG00000170340.10992.771201639.12140-0.723406.611604.84720HepG2STIP1
B3GNT2ENSG00000170340.101673.72530856.924600.965709.061606.97060HepG2SUB1
B3GNT2ENSG00000170340.10836.207301444.30720-0.7884021.4905020.02140HepG2SUCLG1
B3GNT2ENSG00000170340.10404.86980748.24150-0.886007.725806.68870HepG2SUPV3L1
B3GNT2ENSG00000170340.101319.015602453.64790-0.8955010.528109.54760HepG2TAF15
B3GNT2ENSG00000170340.10902.842901584.44470-0.811404.053102.77930HepG2TBRG4
B3GNT2ENSG00000170340.102820.236502254.828200.322703.406702.48400HepG2TIA1
B3GNT2ENSG00000170340.10244.42120898.08330-1.8775048.8203047.20140HepG2TIAL1
B3GNT2ENSG00000170340.101380.69490920.530000.584803.855702.13030HepG2TRA2A
B3GNT2ENSG00000170340.10723.84100906.17230-0.324103.284402.68150HepG2TRIM56
B3GNT2ENSG00000170340.101302.33830880.959900.563905.179404.33510HepG2U2AF1
B3GNT2ENSG00000170340.10927.877801329.96110-0.519404.235503.18750HepG2UBE2L3
B3GNT2ENSG00000170340.10646.20170893.58340-0.467605.389904.60040HepG2UTP3
B3GNT2ENSG00000170340.10346.37240736.56130-1.0885012.2087010.70770HepG2XRN2
B3GNT2ENSG00000170340.10469.86770734.07120-0.643709.121908.02150HepG2ZC3H8
B3GNT2ENSG00000170340.101466.796501017.929100.526908.767207.93440HepG2ZNF622
B3GNT2ENSG00000170340.101773.04710915.903500.9529010.366307.75040HepG2ZRANB2
B3GNT2ENSG00000170340.101028.60090750.983000.453705.763904.99270K562AGGF1
B3GNT2ENSG00000170340.101563.047901258.930500.312102.358301.81030K562AQR
B3GNT2ENSG00000170340.10574.49070704.97720-0.295302.275001.40570K562BCLAF1
B3GNT2ENSG00000170340.10178.76060335.89420-0.910006.738804.91700K562CCAR1
B3GNT2ENSG00000170340.10402.16790630.85620-0.649506.079504.92080K562CPSF6
B3GNT2ENSG00000170340.101027.72960840.855400.289402.637301.78590K562DKC1
B3GNT2ENSG00000170340.10708.21670906.25530-0.355703.313302.53790K562EIF2S2
B3GNT2ENSG00000170340.10517.20720659.04910-0.349602.136601.41120K562EIF4A3
B3GNT2ENSG00000170340.10427.77320561.01600-0.391202.659401.42020K562EXOSC5
B3GNT2ENSG00000170340.10418.27460580.04740-0.471702.825701.68610K562FKBP4
B3GNT2ENSG00000170340.10364.85220544.03630-0.576403.798802.71280K562FTO
B3GNT2ENSG00000170340.10472.98020602.31750-0.348702.031501.34760K562GPKOW
B3GNT2ENSG00000170340.10948.142201207.70240-0.349102.857702.09130K562GRSF1
B3GNT2ENSG00000170340.101117.06070724.033500.625502.537801.38400K562HNRNPA2B1
B3GNT2ENSG00000170340.10263.12320668.15920-1.3445020.4271018.88550K562HNRNPC
B3GNT2ENSG00000170340.10664.34540936.94700-0.496004.762003.33210K562HNRNPL
B3GNT2ENSG00000170340.101230.28310829.284500.569006.020104.69770K562KIF1C
B3GNT2ENSG00000170340.10736.00990972.35620-0.401802.898801.95240K562MATR3
B3GNT2ENSG00000170340.101245.12990929.010200.422404.023202.89200K562MBNL1
B3GNT2ENSG00000170340.10334.65480587.92690-0.813008.208206.65030K562METAP2
B3GNT2ENSG00000170340.10595.57250768.32440-0.367403.392102.50110K562MTPAP
B3GNT2ENSG00000170340.101231.20760651.170100.918902.991902.06820K562NAA15
B3GNT2ENSG00000170340.10650.29160853.59920-0.392504.540503.61320K562NSUN2
B3GNT2ENSG00000170340.10996.42610633.337600.653702.728601.74730K562PABPN1
B3GNT2ENSG00000170340.10445.30870713.61200-0.680305.660904.46470K562PCBP3
B3GNT2ENSG00000170340.10654.11360886.17990-0.438103.022101.39180K562PKM
B3GNT2ENSG00000170340.10359.25660547.38360-0.607505.142104.04890K562POLR2G
B3GNT2ENSG00000170340.10438.46630599.07190-0.450302.787901.87990K562PSIP1
B3GNT2ENSG00000170340.102126.08120774.940901.4559036.0989034.08050K562PUS1
B3GNT2ENSG00000170340.101362.52360755.087300.8515013.1981011.89780K562RBM15
B3GNT2ENSG00000170340.10739.61850955.31080-0.369202.489301.46040K562NELFE
B3GNT2ENSG00000170340.10469.83170677.35000-0.527803.450602.32220K562RPS3
B3GNT2ENSG00000170340.10348.92260487.67280-0.483003.115701.96620K562SAFB
B3GNT2ENSG00000170340.10388.99540572.80670-0.558303.461902.37030K562SF3B1
B3GNT2ENSG00000170340.101046.29970665.176600.653402.559801.39650K562SNRNP200
B3GNT2ENSG00000170340.10394.63820518.12730-0.392802.195401.30260K562SRFBP1
B3GNT2ENSG00000170340.10671.50970927.85820-0.466504.252003.38300K562SRSF1
B3GNT2ENSG00000170340.10419.67270653.94490-0.639905.745104.12300K562SRSF4
B3GNT2ENSG00000170340.101050.095801404.43630-0.419504.457902.59190K562SUCLG1
B3GNT2ENSG00000170340.10423.06290589.33080-0.478202.711401.70510K562SUPV3L1
B3GNT2ENSG00000170340.10625.27110905.89980-0.534904.922603.78380K562TIA1
B3GNT2ENSG00000170340.10354.05630576.20860-0.702605.365804.02320K562TIAL1
B3GNT2ENSG00000170340.10583.61480905.09550-0.633109.508108.27360K562UPF1
B3GNT2ENSG00000170340.10579.35460774.45160-0.418703.310602.35750K562WDR3
B3GNT2ENSG00000170340.10407.56340635.06210-0.639905.067303.24830K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for B3GNT2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of B3GNT2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for B3GNT2 is not avaliable on ENCORE database.